data_ZQ9 # _chem_comp.id ZQ9 _chem_comp.name "4-(thiophene-2-carbonyl)-N-[(thiophen-2-yl)methyl]piperazine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H17 N3 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-03-17 _chem_comp.pdbx_modified_date 2023-03-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 335.444 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZQ9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7FVR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZQ9 N1 N1 N 0 1 N N N -15.888 17.065 26.080 2.363 0.853 0.093 N1 ZQ9 1 ZQ9 N3 N2 N 0 1 N N N -19.051 13.301 26.000 -2.357 1.083 -0.436 N3 ZQ9 2 ZQ9 C4 C1 C 0 1 Y N N -17.616 19.425 26.589 4.671 -0.975 -1.346 C4 ZQ9 3 ZQ9 C5 C2 C 0 1 Y N N -18.245 20.643 26.264 5.396 -2.136 -1.138 C5 ZQ9 4 ZQ9 C6 C3 C 0 1 Y N N -17.376 21.650 26.045 5.825 -2.314 0.112 C6 ZQ9 5 ZQ9 C7 C4 C 0 1 N N N -17.897 15.270 25.231 -0.302 0.283 0.607 C7 ZQ9 6 ZQ9 C8 C5 C 0 1 N N N -18.015 13.768 25.086 -1.391 -0.024 -0.428 C8 ZQ9 7 ZQ9 C10 C6 C 0 1 N N N -18.559 15.052 27.597 -0.774 2.755 0.369 C10 ZQ9 8 ZQ9 C13 C7 C 0 1 Y N N -21.752 13.345 27.420 -5.023 -0.841 1.050 C13 ZQ9 9 ZQ9 C15 C8 C 0 1 Y N N -23.675 12.167 26.923 -4.636 -2.935 0.210 C15 ZQ9 10 ZQ9 C1 C9 C 0 1 N N N -16.705 16.552 27.016 1.501 1.885 0.185 C1 ZQ9 11 ZQ9 C11 C10 C 0 1 N N N -20.169 12.758 25.490 -3.669 0.849 -0.234 C11 ZQ9 12 ZQ9 C12 C11 C 0 1 Y N N -21.367 12.672 26.268 -4.134 -0.508 0.067 C12 ZQ9 13 ZQ9 C14 C12 C 0 1 Y N N -23.115 13.096 27.724 -5.283 -2.190 1.113 C14 ZQ9 14 ZQ9 C2 C13 C 0 1 N N N -15.261 18.365 26.234 3.771 1.101 -0.230 C2 ZQ9 15 ZQ9 C3 C14 C 0 1 Y N N -16.248 19.495 26.276 4.516 -0.208 -0.266 C3 ZQ9 16 ZQ9 C9 C15 C 0 1 N N N -18.687 13.556 27.390 -1.867 2.450 -0.662 C9 ZQ9 17 ZQ9 N2 N3 N 0 1 N N N -17.643 15.654 26.624 0.189 1.650 0.381 N2 ZQ9 18 ZQ9 O1 O1 O 0 1 N N N -16.649 16.941 28.194 1.908 3.027 0.092 O1 ZQ9 19 ZQ9 O2 O2 O 0 1 N N N -20.202 12.380 24.331 -4.468 1.765 -0.302 O2 ZQ9 20 ZQ9 S1 S1 S 0 1 Y N N -15.778 21.099 25.906 5.306 -0.963 1.112 S1 ZQ9 21 ZQ9 S2 S2 S 0 1 Y N N -22.627 11.649 25.689 -3.638 -1.967 -0.779 S2 ZQ9 22 ZQ9 H1 H1 H 0 1 N N N -15.707 16.535 25.252 2.053 -0.054 0.243 H1 ZQ9 23 ZQ9 H4 H2 H 0 1 N N N -18.112 18.565 27.015 4.265 -0.709 -2.311 H4 ZQ9 24 ZQ9 H5 H3 H 0 1 N N N -19.317 20.758 26.197 5.598 -2.844 -1.928 H5 ZQ9 25 ZQ9 H6 H4 H 0 1 N N N -17.664 22.688 25.967 6.403 -3.159 0.458 H6 ZQ9 26 ZQ9 H7 H5 H 0 1 N N N -18.835 15.737 24.896 -0.719 0.206 1.611 H7 ZQ9 27 ZQ9 H8 H6 H 0 1 N N N -17.066 15.626 24.604 0.519 -0.425 0.496 H8 ZQ9 28 ZQ9 H10 H7 H 0 1 N N N -18.289 13.514 24.051 -1.898 -0.951 -0.161 H10 ZQ9 29 ZQ9 H9 H8 H 0 1 N N N -17.055 13.293 25.338 -0.939 -0.123 -1.416 H9 ZQ9 30 ZQ9 H14 H9 H 0 1 N N N -19.551 15.514 27.487 -0.267 3.682 0.102 H14 ZQ9 31 ZQ9 H13 H10 H 0 1 N N N -18.177 15.241 28.611 -1.222 2.855 1.358 H13 ZQ9 32 ZQ9 H15 H11 H 0 1 N N N -21.100 13.975 28.007 -5.472 -0.118 1.714 H15 ZQ9 33 ZQ9 H17 H12 H 0 1 N N N -24.680 11.793 27.051 -4.728 -4.008 0.123 H17 ZQ9 34 ZQ9 H16 H13 H 0 1 N N N -23.650 13.599 28.516 -5.961 -2.616 1.838 H16 ZQ9 35 ZQ9 H2 H14 H 0 1 N N N -14.686 18.367 27.172 3.840 1.586 -1.204 H2 ZQ9 36 ZQ9 H3 H15 H 0 1 N N N -14.579 18.527 25.386 4.209 1.748 0.530 H3 ZQ9 37 ZQ9 H11 H16 H 0 1 N N N -19.467 13.156 28.055 -1.454 2.529 -1.668 H11 ZQ9 38 ZQ9 H12 H17 H 0 1 N N N -17.727 13.068 27.616 -2.688 3.157 -0.545 H12 ZQ9 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZQ9 O1 C1 DOUB N N 1 ZQ9 C1 N1 SING N N 2 ZQ9 N1 C2 SING N N 3 ZQ9 C2 C3 SING N N 4 ZQ9 C3 C4 DOUB Y N 5 ZQ9 C4 C5 SING Y N 6 ZQ9 C5 C6 DOUB Y N 7 ZQ9 C6 S1 SING Y N 8 ZQ9 C1 N2 SING N N 9 ZQ9 N2 C7 SING N N 10 ZQ9 C7 C8 SING N N 11 ZQ9 C8 N3 SING N N 12 ZQ9 N3 C9 SING N N 13 ZQ9 C9 C10 SING N N 14 ZQ9 N3 C11 SING N N 15 ZQ9 C11 O2 DOUB N N 16 ZQ9 C11 C12 SING N N 17 ZQ9 C12 C13 DOUB Y N 18 ZQ9 C13 C14 SING Y N 19 ZQ9 C14 C15 DOUB Y N 20 ZQ9 C15 S2 SING Y N 21 ZQ9 C3 S1 SING Y N 22 ZQ9 N2 C10 SING N N 23 ZQ9 C12 S2 SING Y N 24 ZQ9 N1 H1 SING N N 25 ZQ9 C4 H4 SING N N 26 ZQ9 C5 H5 SING N N 27 ZQ9 C6 H6 SING N N 28 ZQ9 C7 H7 SING N N 29 ZQ9 C7 H8 SING N N 30 ZQ9 C8 H10 SING N N 31 ZQ9 C8 H9 SING N N 32 ZQ9 C10 H14 SING N N 33 ZQ9 C10 H13 SING N N 34 ZQ9 C13 H15 SING N N 35 ZQ9 C15 H17 SING N N 36 ZQ9 C14 H16 SING N N 37 ZQ9 C2 H2 SING N N 38 ZQ9 C2 H3 SING N N 39 ZQ9 C9 H11 SING N N 40 ZQ9 C9 H12 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZQ9 SMILES ACDLabs 12.01 "O=C(NCc1cccs1)N1CCN(CC1)C(=O)c1cccs1" ZQ9 InChI InChI 1.06 "InChI=1S/C15H17N3O2S2/c19-14(13-4-2-10-22-13)17-5-7-18(8-6-17)15(20)16-11-12-3-1-9-21-12/h1-4,9-10H,5-8,11H2,(H,16,20)" ZQ9 InChIKey InChI 1.06 SEJPAIIMDWAFGL-UHFFFAOYSA-N ZQ9 SMILES_CANONICAL CACTVS 3.385 "O=C(NCc1sccc1)N2CCN(CC2)C(=O)c3sccc3" ZQ9 SMILES CACTVS 3.385 "O=C(NCc1sccc1)N2CCN(CC2)C(=O)c3sccc3" ZQ9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)CNC(=O)N2CCN(CC2)C(=O)c3cccs3" ZQ9 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)CNC(=O)N2CCN(CC2)C(=O)c3cccs3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZQ9 "SYSTEMATIC NAME" ACDLabs 12.01 "4-(thiophene-2-carbonyl)-N-[(thiophen-2-yl)methyl]piperazine-1-carboxamide" ZQ9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-thiophen-2-ylcarbonyl-~{N}-(thiophen-2-ylmethyl)piperazine-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZQ9 "Create component" 2023-03-17 RCSB ZQ9 "Initial release" 2023-03-29 RCSB #