data_ZR4 # _chem_comp.id ZR4 _chem_comp.name "7-[(5R)-5-C-(4-chloro-3-fluorophenyl)-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H16 Cl F N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-21 _chem_comp.pdbx_modified_date 2021-11-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 394.785 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZR4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7MXG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZR4 C17 C1 C 0 1 Y N N -26.119 -29.785 -38.357 3.873 -1.143 0.474 C17 ZR4 1 ZR4 C16 C2 C 0 1 Y N N -24.852 -29.234 -38.365 4.791 -0.201 0.902 C16 ZR4 2 ZR4 C5 C3 C 0 1 Y N N -34.123 -31.289 -40.175 -2.768 2.086 -1.087 C5 ZR4 3 ZR4 C13 C4 C 0 1 Y N N -27.091 -27.602 -38.371 2.828 0.503 -0.917 C13 ZR4 4 ZR4 C6 C5 C 0 1 Y N N -32.933 -30.655 -40.249 -1.767 1.208 -0.907 C6 ZR4 5 ZR4 C3 C6 C 0 1 Y N N -32.973 -34.609 -42.216 -5.522 0.251 1.349 C3 ZR4 6 ZR4 C1 C7 C 0 1 Y N N -33.962 -32.551 -40.829 -3.892 1.616 -0.281 C1 ZR4 7 ZR4 C12 C8 C 0 1 Y N N -27.249 -28.985 -38.368 2.894 -0.791 -0.437 C12 ZR4 8 ZR4 C14 C9 C 0 1 Y N N -25.824 -27.066 -38.390 3.743 1.448 -0.486 C14 ZR4 9 ZR4 C15 C10 C 0 1 Y N N -24.702 -27.866 -38.365 4.727 1.094 0.423 C15 ZR4 10 ZR4 C2 C11 C 0 1 Y N N -32.641 -32.606 -41.300 -3.459 0.433 0.346 C2 ZR4 11 ZR4 C4 C12 C 0 1 Y N N -34.766 -33.679 -41.103 -5.197 2.070 -0.032 C4 ZR4 12 ZR4 C9 C13 C 0 1 N N S -28.942 -29.388 -41.058 -0.286 -2.949 -0.383 C9 ZR4 13 ZR4 C10 C14 C 0 1 N N R -30.352 -29.669 -41.608 -1.606 -2.154 -0.528 C10 ZR4 14 ZR4 C8 C15 C 0 1 N N R -28.821 -30.301 -39.829 0.738 -1.899 0.089 C8 ZR4 15 ZR4 C7 C16 C 0 1 N N R -30.599 -31.089 -41.099 -1.340 -0.918 0.369 C7 ZR4 16 ZR4 C11 C17 C 0 1 N N R -28.629 -29.603 -38.481 1.898 -1.821 -0.906 C11 ZR4 17 ZR4 N1 N1 N 0 1 Y N N -32.106 -33.617 -42.006 -4.307 -0.210 1.148 N1 ZR4 18 ZR4 N2 N2 N 0 1 Y N N -34.246 -34.700 -41.820 -5.967 1.360 0.786 N2 ZR4 19 ZR4 N3 N3 N 0 1 Y N N -32.011 -31.439 -40.930 -2.170 0.214 -0.053 N3 ZR4 20 ZR4 N4 N4 N 0 1 N N N -36.015 -33.794 -40.643 -5.669 3.228 -0.624 N4 ZR4 21 ZR4 O1 O1 O 0 1 N N N -30.006 -31.118 -39.815 0.058 -0.634 0.146 O1 ZR4 22 ZR4 O3 O2 O 0 1 N N N -27.941 -29.612 -42.044 -0.427 -3.984 0.593 O3 ZR4 23 ZR4 O4 O3 O 0 1 N N N -30.435 -29.532 -43.032 -2.714 -2.911 -0.038 O4 ZR4 24 ZR4 O2 O4 O 0 1 N N N -29.655 -28.645 -38.230 2.537 -3.096 -0.994 O2 ZR4 25 ZR4 F1 F1 F 0 1 N N N -25.672 -25.725 -38.500 3.679 2.714 -0.956 F1 ZR4 26 ZR4 CL1 CL1 CL 0 0 N N N -23.122 -27.157 -38.211 5.879 2.277 0.960 CL1 ZR4 27 ZR4 H13 H1 H 0 1 N N N -26.230 -30.859 -38.342 3.924 -2.154 0.848 H13 ZR4 28 ZR4 H12 H2 H 0 1 N N N -23.982 -29.875 -38.371 5.557 -0.478 1.610 H12 ZR4 29 ZR4 H2 H3 H 0 1 N N N -35.024 -30.915 -39.711 -2.744 2.971 -1.705 H2 ZR4 30 ZR4 H11 H4 H 0 1 N N N -27.956 -26.955 -38.359 2.063 0.777 -1.628 H11 ZR4 31 ZR4 H3 H5 H 0 1 N N N -32.728 -29.678 -39.837 -0.792 1.275 -1.366 H3 ZR4 32 ZR4 H1 H6 H 0 1 N N N -32.596 -35.449 -42.780 -6.182 -0.297 2.006 H1 ZR4 33 ZR4 H8 H7 H 0 1 N N N -28.905 -28.342 -40.718 0.013 -3.370 -1.343 H8 ZR4 34 ZR4 H9 H8 H 0 1 N N N -31.064 -28.987 -41.119 -1.768 -1.855 -1.564 H9 ZR4 35 ZR4 H7 H9 H 0 1 N N N -27.949 -30.952 -39.989 1.113 -2.164 1.077 H7 ZR4 36 ZR4 H6 H10 H 0 1 N N N -30.109 -31.807 -41.773 -1.524 -1.157 1.416 H6 ZR4 37 ZR4 H10 H11 H 0 1 N N N -28.695 -30.383 -37.708 1.517 -1.537 -1.887 H10 ZR4 38 ZR4 H5 H12 H 0 1 N N N -36.393 -34.677 -40.921 -5.096 3.737 -1.219 H5 ZR4 39 ZR4 H4 H13 H 0 1 N N N -36.009 -33.733 -39.645 -6.572 3.532 -0.444 H4 ZR4 40 ZR4 H15 H14 H 0 1 N N N -27.085 -29.430 -41.674 -1.060 -4.672 0.348 H15 ZR4 41 ZR4 H16 H15 H 0 1 N N N -30.271 -28.628 -43.274 -2.920 -3.694 -0.566 H16 ZR4 42 ZR4 H14 H16 H 0 1 N N N -29.505 -28.233 -37.388 2.901 -3.412 -0.156 H14 ZR4 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZR4 O4 C10 SING N N 1 ZR4 C3 N1 DOUB Y N 2 ZR4 C3 N2 SING Y N 3 ZR4 O3 C9 SING N N 4 ZR4 N1 C2 SING Y N 5 ZR4 N2 C4 DOUB Y N 6 ZR4 C10 C7 SING N N 7 ZR4 C10 C9 SING N N 8 ZR4 C2 N3 SING Y N 9 ZR4 C2 C1 DOUB Y N 10 ZR4 C4 C1 SING Y N 11 ZR4 C4 N4 SING N N 12 ZR4 C7 N3 SING N N 13 ZR4 C7 O1 SING N N 14 ZR4 C9 C8 SING N N 15 ZR4 N3 C6 SING Y N 16 ZR4 C1 C5 SING Y N 17 ZR4 C6 C5 DOUB Y N 18 ZR4 C8 O1 SING N N 19 ZR4 C8 C11 SING N N 20 ZR4 F1 C14 SING N N 21 ZR4 C11 C12 SING N N 22 ZR4 C11 O2 SING N N 23 ZR4 C14 C13 DOUB Y N 24 ZR4 C14 C15 SING Y N 25 ZR4 C13 C12 SING Y N 26 ZR4 C12 C17 DOUB Y N 27 ZR4 C16 C15 DOUB Y N 28 ZR4 C16 C17 SING Y N 29 ZR4 C15 CL1 SING N N 30 ZR4 C17 H13 SING N N 31 ZR4 C16 H12 SING N N 32 ZR4 C5 H2 SING N N 33 ZR4 C13 H11 SING N N 34 ZR4 C6 H3 SING N N 35 ZR4 C3 H1 SING N N 36 ZR4 C9 H8 SING N N 37 ZR4 C10 H9 SING N N 38 ZR4 C8 H7 SING N N 39 ZR4 C7 H6 SING N N 40 ZR4 C11 H10 SING N N 41 ZR4 N4 H5 SING N N 42 ZR4 N4 H4 SING N N 43 ZR4 O3 H15 SING N N 44 ZR4 O4 H16 SING N N 45 ZR4 O2 H14 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZR4 SMILES ACDLabs 12.01 "Clc1ccc(cc1F)C(O)C1OC(n2ccc3c(N)ncnc32)C(O)C1O" ZR4 InChI InChI 1.03 "InChI=1S/C17H16ClFN4O4/c18-9-2-1-7(5-10(9)19)11(24)14-12(25)13(26)17(27-14)23-4-3-8-15(20)21-6-22-16(8)23/h1-6,11-14,17,24-26H,(H2,20,21,22)/t11-,12+,13-,14-,17-/m1/s1" ZR4 InChIKey InChI 1.03 GTCYWLXMJRCJNE-QFRSUPTLSA-N ZR4 SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(ccc12)[C@@H]3O[C@@H]([C@@H](O)[C@H]3O)[C@H](O)c4ccc(Cl)c(F)c4" ZR4 SMILES CACTVS 3.385 "Nc1ncnc2n(ccc12)[CH]3O[CH]([CH](O)[CH]3O)[CH](O)c4ccc(Cl)c(F)c4" ZR4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1[C@H]([C@@H]2[C@H]([C@H]([C@@H](O2)n3ccc4c3ncnc4N)O)O)O)F)Cl" ZR4 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C(C2C(C(C(O2)n3ccc4c3ncnc4N)O)O)O)F)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZR4 "SYSTEMATIC NAME" ACDLabs 12.01 "7-[(5R)-5-C-(4-chloro-3-fluorophenyl)-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine" ZR4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{S},5~{R})-2-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-5-[(~{R})-(4-chloranyl-3-fluoranyl-phenyl)-oxidanyl-methyl]oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZR4 "Create component" 2021-05-21 RCSB ZR4 "Initial release" 2021-11-17 RCSB ##