data_ZT1 # _chem_comp.id ZT1 _chem_comp.name "N~6~-[(1-methyl-1H-imidazol-5-yl)methyl]-N~6~-propan-2-yl-L-lysine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H26 N4 O2" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-05-28 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 282.382 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZT1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7N27 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZT1 O O O 0 1 N N N Y N Y 16.023 26.783 25.462 -6.515 -0.429 -0.786 O ZT1 1 ZT1 C C C 0 1 N N N Y N Y 14.849 26.954 25.172 -5.850 0.482 -0.353 C ZT1 2 ZT1 CA CA C 0 1 N N S Y N N 14.494 27.677 23.881 -4.716 0.201 0.599 CA ZT1 3 ZT1 N N N 0 1 N N N Y Y N 14.808 29.074 24.127 -4.907 -1.121 1.211 N ZT1 4 ZT1 CB CB C 0 1 N N N N N N 15.276 27.213 22.669 -3.391 0.223 -0.165 CB ZT1 5 ZT1 CG CG C 0 1 N N N N N N 15.113 25.709 22.369 -2.231 0.062 0.820 CG ZT1 6 ZT1 CD CD C 0 1 N N N N N N 15.886 25.404 21.065 -0.906 0.085 0.056 CD ZT1 7 ZT1 CE CE C 0 1 N N N N N N 15.897 23.881 20.753 0.253 -0.076 1.042 CE ZT1 8 ZT1 NZ NZ N 0 1 N N N N N N 17.083 23.454 19.917 1.527 0.108 0.333 NZ ZT1 9 ZT1 CAB CAB C 0 1 N N N N N N 17.066 24.043 18.545 1.738 -0.957 -0.656 CAB ZT1 10 ZT1 CAC CAC C 0 1 N N N N N N 17.588 25.488 18.502 1.061 -2.242 -0.174 CAC ZT1 11 ZT1 CAA CAA C 0 1 N N N N N N 15.676 23.961 17.896 1.136 -0.535 -1.997 CAA ZT1 12 ZT1 CAQ CAQ C 0 1 N N N N N N 17.262 21.960 19.782 2.649 0.179 1.278 CAQ ZT1 13 ZT1 CAP CAP C 0 1 Y N N N N N 16.577 21.112 20.892 3.899 0.592 0.544 CAP ZT1 14 ZT1 CAR CAR C 0 1 Y N N N N N 17.116 20.843 22.077 4.352 1.849 0.373 CAR ZT1 15 ZT1 NAS NAS N 0 1 Y N N N N N 16.256 20.086 22.764 5.490 1.788 -0.333 NAS ZT1 16 ZT1 CAT CAT C 0 1 Y N N N N N 15.181 19.900 22.002 5.761 0.541 -0.606 CAT ZT1 17 ZT1 NAN NAN N 0 1 Y N N N N N 15.387 20.520 20.835 4.795 -0.238 -0.073 NAN ZT1 18 ZT1 CAO CAO C 0 1 N N N N N N 14.389 20.514 19.770 4.720 -1.700 -0.143 CAO ZT1 19 ZT1 HA HA H 0 1 N N N Y N N 13.418 27.560 23.685 -4.699 0.963 1.378 HA ZT1 20 ZT1 H H H 0 1 N N N Y Y N 14.299 29.395 24.925 -5.743 -1.141 1.775 H ZT1 21 ZT1 H2 H2 H 0 1 N Y N Y Y N 15.789 29.170 24.297 -4.926 -1.845 0.509 H2 ZT1 22 ZT1 HB2 HB2 H 0 1 N N N N N N 16.342 27.420 22.843 -3.372 -0.595 -0.884 HB2 ZT1 23 ZT1 HB3 HB3 H 0 1 N N N N N N 14.930 27.782 21.793 -3.291 1.172 -0.692 HB3 ZT1 24 ZT1 HG2 HG2 H 0 1 N N N N N N 14.048 25.466 22.239 -2.250 0.881 1.540 HG2 ZT1 25 ZT1 HG3 HG3 H 0 1 N N N N N N 15.526 25.115 23.197 -2.331 -0.887 1.347 HG3 ZT1 26 ZT1 HD2 HD2 H 0 1 N N N N N N 16.923 25.754 21.174 -0.888 -0.734 -0.663 HD2 ZT1 27 ZT1 HD3 HD3 H 0 1 N N N N N N 15.405 25.936 20.231 -0.806 1.033 -0.471 HD3 ZT1 28 ZT1 HE2 HE2 H 0 1 N N N N N N 14.976 23.629 20.208 0.166 0.670 1.831 HE2 ZT1 29 ZT1 HE3 HE3 H 0 1 N N N N N N 15.923 23.329 21.704 0.222 -1.074 1.480 HE3 ZT1 30 ZT1 H15 H15 H 0 1 N N N N N N 17.744 23.441 17.922 2.807 -1.134 -0.777 H15 ZT1 31 ZT1 H16 H16 H 0 1 N N N N N N 18.583 25.533 18.969 -0.008 -2.066 -0.053 H16 ZT1 32 ZT1 H17 H17 H 0 1 N N N N N N 17.659 25.821 17.456 1.218 -3.033 -0.908 H17 ZT1 33 ZT1 H18 H18 H 0 1 N N N N N N 16.896 26.144 19.050 1.490 -2.543 0.782 H18 ZT1 34 ZT1 H19 H19 H 0 1 N N N N N N 15.314 22.923 17.933 1.741 0.260 -2.433 H19 ZT1 35 ZT1 H20 H20 H 0 1 N N N N N N 14.978 24.612 18.442 1.119 -1.390 -2.673 H20 ZT1 36 ZT1 H21 H21 H 0 1 N N N N N N 15.741 24.289 16.848 0.119 -0.174 -1.841 H21 ZT1 37 ZT1 H22 H22 H 0 1 N N N N N N 16.845 21.653 18.812 2.425 0.912 2.054 H22 ZT1 38 ZT1 H23 H23 H 0 1 N N N N N N 18.340 21.742 19.803 2.803 -0.798 1.735 H23 ZT1 39 ZT1 H24 H24 H 0 1 N N N N N N 18.082 21.178 22.424 3.880 2.749 0.740 H24 ZT1 40 ZT1 H25 H25 H 0 1 N N N N N N 14.296 19.345 22.278 6.616 0.190 -1.164 H25 ZT1 41 ZT1 H26 H26 H 0 1 N N N N N N 13.523 19.912 20.082 4.253 -1.995 -1.083 H26 ZT1 42 ZT1 H27 H27 H 0 1 N N N N N N 14.065 21.545 19.566 5.725 -2.118 -0.090 H27 ZT1 43 ZT1 H28 H28 H 0 1 N N N N N N 14.827 20.080 18.859 4.126 -2.073 0.691 H28 ZT1 44 ZT1 OXT OXT O 0 1 N Y N Y N Y 13.823 26.587 25.954 -6.117 1.744 -0.725 OXT ZT1 45 ZT1 HXT H1 H 0 1 N Y N Y N Y 14.157 26.184 26.747 -6.852 1.874 -1.340 H1 ZT1 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZT1 CAA CAB SING N N 1 ZT1 CAC CAB SING N N 2 ZT1 CAB NZ SING N N 3 ZT1 CAO NAN SING N N 4 ZT1 CAQ NZ SING N N 5 ZT1 CAQ CAP SING N N 6 ZT1 NZ CE SING N N 7 ZT1 CE CD SING N N 8 ZT1 NAN CAP SING Y N 9 ZT1 NAN CAT SING Y N 10 ZT1 CAP CAR DOUB Y N 11 ZT1 CD CG SING N N 12 ZT1 CAT NAS DOUB Y N 13 ZT1 CAR NAS SING Y N 14 ZT1 CG CB SING N N 15 ZT1 CB CA SING N N 16 ZT1 CA N SING N N 17 ZT1 CA C SING N N 18 ZT1 C O DOUB N N 19 ZT1 CA HA SING N N 20 ZT1 N H SING N N 21 ZT1 N H2 SING N N 22 ZT1 CB HB2 SING N N 23 ZT1 CB HB3 SING N N 24 ZT1 CG HG2 SING N N 25 ZT1 CG HG3 SING N N 26 ZT1 CD HD2 SING N N 27 ZT1 CD HD3 SING N N 28 ZT1 CE HE2 SING N N 29 ZT1 CE HE3 SING N N 30 ZT1 CAB H15 SING N N 31 ZT1 CAC H16 SING N N 32 ZT1 CAC H17 SING N N 33 ZT1 CAC H18 SING N N 34 ZT1 CAA H19 SING N N 35 ZT1 CAA H20 SING N N 36 ZT1 CAA H21 SING N N 37 ZT1 CAQ H22 SING N N 38 ZT1 CAQ H23 SING N N 39 ZT1 CAR H24 SING N N 40 ZT1 CAT H25 SING N N 41 ZT1 CAO H26 SING N N 42 ZT1 CAO H27 SING N N 43 ZT1 CAO H28 SING N N 44 ZT1 C OXT SING N N 45 ZT1 OXT HXT SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZT1 SMILES ACDLabs 12.01 "Cn1cncc1CN(CCCCC(N)C(=O)O)C(C)C" ZT1 InChI InChI 1.03 "InChI=1S/C14H26N4O2/c1-11(2)18(9-12-8-16-10-17(12)3)7-5-4-6-13(15)14(19)20/h8,10-11,13H,4-7,9,15H2,1-3H3,(H,19,20)/t13-/m0/s1" ZT1 InChIKey InChI 1.03 LXXPOZGLFXPWOY-ZDUSSCGKSA-N ZT1 SMILES_CANONICAL CACTVS 3.385 "CC(C)N(CCCC[C@H](N)C(O)=O)Cc1cncn1C" ZT1 SMILES CACTVS 3.385 "CC(C)N(CCCC[CH](N)C(O)=O)Cc1cncn1C" ZT1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)N(CCCC[C@@H](C(=O)O)N)Cc1cncn1C" ZT1 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)N(CCCCC(C(=O)O)N)Cc1cncn1C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZT1 "SYSTEMATIC NAME" ACDLabs 12.01 "N~6~-[(1-methyl-1H-imidazol-5-yl)methyl]-N~6~-propan-2-yl-L-lysine" ZT1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-azanyl-6-[(3-methylimidazol-4-yl)methyl-propan-2-yl-amino]hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZT1 "Create component" 2021-05-28 RCSB ZT1 "Initial release" 2021-07-21 RCSB ZT1 "Modify backbone" 2023-11-03 PDBE #