data_ZVR # _chem_comp.id ZVR _chem_comp.name "N-{4-[3-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)propyl]-2-fluorobenzoyl}-L-glutamic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H22 F N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-04-06 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.428 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZVR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GKY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZVR C20 C1 C 0 1 N N S N N N -36.749 75.792 3.725 5.343 0.045 1.045 C20 ZVR 1 ZVR C23 C2 C 0 1 N N N N N N -38.862 77.427 0.907 7.136 2.035 -1.691 C23 ZVR 2 ZVR C26 C3 C 0 1 N N N N N N -36.617 76.497 5.085 5.201 0.287 2.525 C26 ZVR 3 ZVR C29 C4 C 0 1 N N N N N N -34.696 65.923 5.574 -4.324 -1.344 -1.565 C29 ZVR 4 ZVR C17 C5 C 0 1 N N N N N N -37.390 73.263 3.267 3.349 -1.215 0.432 C17 ZVR 5 ZVR N19 N1 N 0 1 N N N N N N -36.727 74.353 3.979 4.014 -0.043 0.435 N19 ZVR 6 ZVR C13 C6 C 0 1 Y N N N N N -36.138 71.692 4.794 1.317 -2.519 -0.188 C13 ZVR 7 ZVR C32 C7 C 0 1 Y N N N N N -36.615 69.345 4.977 -0.503 -1.469 -1.340 C32 ZVR 8 ZVR C12 C8 C 0 1 Y N N N N N -37.136 71.847 3.837 2.009 -1.303 -0.183 C12 ZVR 9 ZVR C02 C9 C 0 1 N N N N N N -38.846 63.499 3.618 -7.052 2.329 0.918 C02 ZVR 10 ZVR C04 C10 C 0 1 N N N N N N -36.828 64.614 3.523 -5.463 1.509 -0.617 C04 ZVR 11 ZVR C05 C11 C 0 1 Y N N N N N -37.634 64.360 7.009 -6.887 -1.354 1.001 C05 ZVR 12 ZVR C06 C12 C 0 1 Y N N N N N -36.419 65.035 7.084 -6.022 -1.978 0.177 C06 ZVR 13 ZVR C08 C13 C 0 1 Y N N N N N -36.812 64.700 4.950 -5.789 0.204 -0.203 C08 ZVR 14 ZVR C09 C14 C 0 1 Y N N N N N -37.878 64.148 5.623 -6.766 0.036 0.786 C09 ZVR 15 ZVR C14 C15 C 0 1 Y N N N N N -37.895 70.748 3.451 1.427 -0.174 -0.761 C14 ZVR 16 ZVR C15 C16 C 0 1 Y N N N N N -35.869 70.447 5.366 0.065 -2.593 -0.770 C15 ZVR 17 ZVR C16 C17 C 0 1 Y N N N N N -37.624 69.497 4.025 0.176 -0.263 -1.333 C16 ZVR 18 ZVR C21 C18 C 0 1 N N N N N N -38.007 76.291 3.026 6.120 1.201 0.411 C21 ZVR 19 ZVR C22 C19 C 0 1 N N N N N N -37.653 77.088 1.777 6.371 0.897 -1.067 C22 ZVR 20 ZVR C30 C20 C 0 1 N N N N N N -34.892 67.450 5.386 -2.938 -1.254 -0.923 C30 ZVR 21 ZVR C31 C21 C 0 1 N N N N N N -36.329 67.962 5.610 -1.868 -1.558 -1.973 C31 ZVR 22 ZVR F33 F1 F 0 1 N N N N N N -35.406 72.776 5.176 1.872 -3.617 0.369 F33 ZVR 23 ZVR N01 N2 N 0 1 N N N N N N -38.882 63.553 4.939 -7.368 1.120 1.316 N01 ZVR 24 ZVR N03 N3 N 0 1 N N N N N N -37.840 64.019 2.914 -6.108 2.548 -0.042 N03 ZVR 25 ZVR N07 N4 N 0 1 Y N N N N N -35.949 65.233 5.865 -5.348 -1.053 -0.559 N07 ZVR 26 ZVR N11 N5 N 0 1 N N N N N N -39.948 62.849 2.924 -7.695 3.406 1.480 N11 ZVR 27 ZVR O10 O1 O 0 1 N N N N N N -35.946 65.070 2.871 -4.618 1.698 -1.475 O10 ZVR 28 ZVR O18 O2 O 0 1 N N N N N N -38.112 73.423 2.334 3.853 -2.201 0.935 O18 ZVR 29 ZVR O24 O3 O 0 1 N N N N N N -39.749 76.562 0.673 7.471 1.987 -2.990 O24 ZVR 30 ZVR O25 O4 O 0 1 N N N N N N -38.965 78.581 0.414 7.448 2.992 -1.022 O25 ZVR 31 ZVR O27 O5 O 0 1 N N N N N N -37.640 76.974 5.648 4.103 0.376 3.021 O27 ZVR 32 ZVR O28 O6 O 0 1 N N N N N N -35.491 76.594 5.651 6.296 0.402 3.294 O28 ZVR 33 ZVR H1 H1 H 0 1 N N N N N N -35.879 76.065 3.110 5.881 -0.888 0.878 H1 ZVR 34 ZVR H2 H2 H 0 1 N N N N N N -34.269 65.505 4.650 -4.395 -0.620 -2.377 H2 ZVR 35 ZVR H3 H3 H 0 1 N N N N N N -33.999 65.756 6.408 -4.477 -2.349 -1.959 H3 ZVR 36 ZVR H4 H4 H 0 1 N N N N N N -36.172 74.071 4.762 3.612 0.744 0.033 H4 ZVR 37 ZVR H5 H5 H 0 1 N N N N N N -38.263 64.059 7.834 -7.555 -1.832 1.702 H5 ZVR 38 ZVR H6 H6 H 0 1 N N N N N N -35.935 65.348 7.997 -5.884 -3.047 0.112 H6 ZVR 39 ZVR H7 H7 H 0 1 N N N N N N -38.682 70.856 2.720 1.956 0.768 -0.761 H7 ZVR 40 ZVR H8 H8 H 0 1 N N N N N N -35.088 70.343 6.104 -0.470 -3.531 -0.779 H8 ZVR 41 ZVR H9 H9 H 0 1 N N N N N N -38.206 68.638 3.725 -0.275 0.611 -1.781 H9 ZVR 42 ZVR H10 H10 H 0 1 N N N N N N -38.572 76.935 3.716 5.540 2.120 0.499 H10 ZVR 43 ZVR H11 H11 H 0 1 N N N N N N -38.626 75.428 2.740 7.073 1.323 0.925 H11 ZVR 44 ZVR H12 H12 H 0 1 N N N N N N -36.946 76.497 1.176 5.418 0.775 -1.581 H12 ZVR 45 ZVR H13 H13 H 0 1 N N N N N N -37.173 78.028 2.088 6.951 -0.022 -1.155 H13 ZVR 46 ZVR H14 H14 H 0 1 N N N N N N -34.232 67.968 6.098 -2.785 -0.249 -0.529 H14 ZVR 47 ZVR H15 H15 H 0 1 N N N N N N -34.596 67.707 4.358 -2.866 -1.978 -0.111 H15 ZVR 48 ZVR H16 H16 H 0 1 N N N N N N -36.504 68.036 6.693 -1.940 -0.834 -2.785 H16 ZVR 49 ZVR H17 H17 H 0 1 N N N N N N -37.027 67.232 5.174 -2.021 -2.563 -2.367 H17 ZVR 50 ZVR H18 H18 H 0 1 N N N N N N -37.851 63.958 1.916 -5.898 3.455 -0.313 H18 ZVR 51 ZVR H19 H19 H 0 1 N N N N N N -40.706 62.458 3.446 -8.371 3.265 2.161 H19 ZVR 52 ZVR H20 H20 H 0 1 N N N N N N -39.947 62.794 1.926 -7.472 4.306 1.196 H20 ZVR 53 ZVR H21 H21 H 0 1 N N N N N N -40.419 76.938 0.114 7.962 2.741 -3.345 H21 ZVR 54 ZVR H22 H22 H 0 1 N N N N N N -35.591 77.047 6.480 6.155 0.556 4.238 H22 ZVR 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZVR O25 C23 DOUB N N 1 ZVR O24 C23 SING N N 2 ZVR C23 C22 SING N N 3 ZVR C22 C21 SING N N 4 ZVR O18 C17 DOUB N N 5 ZVR O10 C04 DOUB N N 6 ZVR N03 C04 SING N N 7 ZVR N03 C02 SING N N 8 ZVR N11 C02 SING N N 9 ZVR C21 C20 SING N N 10 ZVR C17 C12 SING N N 11 ZVR C17 N19 SING N N 12 ZVR C14 C12 DOUB Y N 13 ZVR C14 C16 SING Y N 14 ZVR C04 C08 SING N N 15 ZVR C02 N01 DOUB N N 16 ZVR C20 N19 SING N N 17 ZVR C20 C26 SING N N 18 ZVR C12 C13 SING Y N 19 ZVR C16 C32 DOUB Y N 20 ZVR C13 F33 SING N N 21 ZVR C13 C15 DOUB Y N 22 ZVR N01 C09 SING N N 23 ZVR C08 C09 DOUB Y N 24 ZVR C08 N07 SING Y N 25 ZVR C32 C15 SING Y N 26 ZVR C32 C31 SING N N 27 ZVR C26 O27 DOUB N N 28 ZVR C26 O28 SING N N 29 ZVR C30 C29 SING N N 30 ZVR C30 C31 SING N N 31 ZVR C29 N07 SING N N 32 ZVR C09 C05 SING Y N 33 ZVR N07 C06 SING Y N 34 ZVR C05 C06 DOUB Y N 35 ZVR C20 H1 SING N N 36 ZVR C29 H2 SING N N 37 ZVR C29 H3 SING N N 38 ZVR N19 H4 SING N N 39 ZVR C05 H5 SING N N 40 ZVR C06 H6 SING N N 41 ZVR C14 H7 SING N N 42 ZVR C15 H8 SING N N 43 ZVR C16 H9 SING N N 44 ZVR C21 H10 SING N N 45 ZVR C21 H11 SING N N 46 ZVR C22 H12 SING N N 47 ZVR C22 H13 SING N N 48 ZVR C30 H14 SING N N 49 ZVR C30 H15 SING N N 50 ZVR C31 H16 SING N N 51 ZVR C31 H17 SING N N 52 ZVR N03 H18 SING N N 53 ZVR N11 H19 SING N N 54 ZVR N11 H20 SING N N 55 ZVR O24 H21 SING N N 56 ZVR O28 H22 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZVR SMILES ACDLabs 12.01 "O=C(O)C(CCC(=O)O)NC(=O)c1ccc(cc1F)CCCn1ccc2N=C(N)NC(=O)c21" ZVR InChI InChI 1.06 "InChI=1S/C21H22FN5O6/c22-13-10-11(2-1-8-27-9-7-14-17(27)19(31)26-21(23)25-14)3-4-12(13)18(30)24-15(20(32)33)5-6-16(28)29/h3-4,7,9-10,15H,1-2,5-6,8H2,(H,24,30)(H,28,29)(H,32,33)(H3,23,25,26,31)/t15-/m0/s1" ZVR InChIKey InChI 1.06 VOXSIQHYUGLGIP-HNNXBMFYSA-N ZVR SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2ccn(CCCc3ccc(c(F)c3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)c2C(=O)N1" ZVR SMILES CACTVS 3.385 "NC1=Nc2ccn(CCCc3ccc(c(F)c3)C(=O)N[CH](CCC(O)=O)C(O)=O)c2C(=O)N1" ZVR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CCCn2ccc3c2C(=O)NC(=N3)N)F)C(=O)N[C@@H](CCC(=O)O)C(=O)O" ZVR SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CCCn2ccc3c2C(=O)NC(=N3)N)F)C(=O)NC(CCC(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZVR "SYSTEMATIC NAME" ACDLabs 12.01 "N-{4-[3-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)propyl]-2-fluorobenzoyl}-L-glutamic acid" ZVR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[4-[3-(2-azanyl-4-oxidanylidene-3~{H}-pyrrolo[3,2-d]pyrimidin-5-yl)propyl]-2-fluoranyl-phenyl]carbonylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZVR "Create component" 2023-04-06 RCSB ZVR "Initial release" 2024-03-20 RCSB #