data_ZW1 # _chem_comp.id ZW1 _chem_comp.name "bis-molybdopterin guanine dinucleotide thiol-molybdenum" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H52 Mo N20 O26 P4 S5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date 2026-04-20 _chem_comp.pdbx_modified_date 2026-08-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1609.119 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 3ML1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y _chem_comp.pdbx_comp_type "metal-containing ligand" # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_component_id ZW1 PB P1 P 0 1 N N N N N N 45.756 -13.834 18.033 ? ? ? PB ZW1 1 1 non-polymer 1 ZW1 O1B O1 O 0 1 N N N N N N 46.145 -13.117 19.277 ? ? ? O1B ZW1 2 1 non-polymer 1 ZW1 O2B O2 O 0 1 N N N N N N 45.860 -15.341 18.037 ? ? ? O2B ZW1 3 1 non-polymer 1 ZW1 O3B O3 O 0 1 N N N N N N 44.189 -13.534 17.690 ? ? ? O3B ZW1 4 1 non-polymer 1 ZW1 O3A O4 O 0 1 N N N N N N 42.109 -12.190 17.954 ? ? ? O3A ZW1 5 1 non-polymer 1 ZW1 PA P2 P 0 1 N N N N N N 43.575 -12.104 17.224 ? ? ? PA ZW1 6 1 non-polymer 1 ZW1 O1A O5 O 0 1 N N N N N N 43.203 -12.267 15.739 ? ? ? O1A ZW1 7 1 non-polymer 1 ZW1 O2A O6 O 0 1 N N N N N N 44.434 -10.985 17.645 ? ? ? O2A ZW1 8 1 non-polymer 1 ZW1 "O5'" O7 O 0 1 N N N N N N 46.542 -13.209 16.737 ? ? ? "O5'" ZW1 9 1 non-polymer 1 ZW1 "C5'" C1 C 0 1 N N N N N N 47.868 -12.728 16.905 ? ? ? "C5'" ZW1 10 1 non-polymer 1 ZW1 "C4'" C2 C 0 1 N N R N N N 48.679 -13.243 15.719 ? ? ? "C4'" ZW1 11 1 non-polymer 1 ZW1 "O4'" O8 O 0 1 N N N N N N 49.949 -12.558 15.780 ? ? ? "O4'" ZW1 12 1 non-polymer 1 ZW1 "C3'" C3 C 0 1 N N S N N N 48.859 -14.790 15.739 ? ? ? "C3'" ZW1 13 1 non-polymer 1 ZW1 "O3'" O9 O 0 1 N N N N N N 48.458 -15.325 14.453 ? ? ? "O3'" ZW1 14 1 non-polymer 1 ZW1 "C2'" C4 C 0 1 N N R N N N 50.367 -14.839 15.915 ? ? ? "C2'" ZW1 15 1 non-polymer 1 ZW1 "O2'" O10 O 0 1 N N N N N N 51.054 -16.011 15.335 ? ? ? "O2'" ZW1 16 1 non-polymer 1 ZW1 "C1'" C5 C 0 1 N N R N N N 50.859 -13.556 15.315 ? ? ? "C1'" ZW1 17 1 non-polymer 1 ZW1 N9 N1 N 0 1 Y N N N N N 52.208 -13.174 15.674 ? ? ? N9 ZW1 18 1 non-polymer 1 ZW1 C8 C6 C 0 1 Y N N N N N 52.746 -13.161 17.016 ? ? ? C8 ZW1 19 1 non-polymer 1 ZW1 N7 N2 N 0 1 Y N N N N N 53.715 -12.236 17.141 ? ? ? N7 ZW1 20 1 non-polymer 1 ZW1 C5 C7 C 0 1 Y N N N N N 53.760 -11.512 15.954 ? ? ? C5 ZW1 21 1 non-polymer 1 ZW1 C6 C8 C 0 1 N N N N N N 54.496 -10.361 15.531 ? ? ? C6 ZW1 22 1 non-polymer 1 ZW1 O6 O11 O 0 1 N N N N N N 55.237 -9.774 16.335 ? ? ? O6 ZW1 23 1 non-polymer 1 ZW1 N1 N3 N 0 1 N N N N N N 54.161 -9.957 14.231 ? ? ? N1 ZW1 24 1 non-polymer 1 ZW1 C2 C9 C 0 1 N N N N N N 53.256 -10.628 13.437 ? ? ? C2 ZW1 25 1 non-polymer 1 ZW1 N2 N4 N 0 1 N N N N N N 53.015 -10.048 12.169 ? ? ? N2 ZW1 26 1 non-polymer 1 ZW1 N3 N5 N 0 1 N N N N N N 52.507 -11.664 13.812 ? ? ? N3 ZW1 27 1 non-polymer 1 ZW1 C4 C10 C 0 1 Y N N N N N 52.802 -12.105 15.083 ? ? ? C4 ZW1 28 1 non-polymer 1 ZW1 C10 C11 C 0 1 N N N N N N 41.988 -11.517 19.243 ? ? ? C10 ZW1 29 1 non-polymer 1 ZW1 C11 C12 C 0 1 N N R N N N 40.505 -10.996 19.214 ? ? ? C11 ZW1 30 1 non-polymer 1 ZW1 O11 O12 O 0 1 N N N N N N 39.668 -12.153 19.054 ? ? ? O11 ZW1 31 1 non-polymer 1 ZW1 C12 C13 C 0 1 N N N N N N 40.119 -10.336 20.506 ? ? ? C12 ZW1 32 1 non-polymer 1 ZW1 S12 S2 S 0 1 N N N N N N 41.370 -9.397 21.368 ? ? ? S12 ZW1 33 1 non-polymer 1 ZW1 C13 C14 C 0 1 N N N N N N 38.906 -10.442 21.037 ? ? ? C13 ZW1 34 1 non-polymer 1 ZW1 S13 S3 S 0 1 N N N N N N 38.555 -9.636 22.585 ? ? ? S13 ZW1 35 1 non-polymer 1 ZW1 C14 C15 C 0 1 N N R N N N 37.844 -11.324 20.492 ? ? ? C14 ZW1 36 1 non-polymer 1 ZW1 N15 N6 N 0 1 N N N N N N 37.620 -12.421 21.370 ? ? ? N15 ZW1 37 1 non-polymer 1 ZW1 C16 C16 C 0 1 N N R N N N 36.784 -13.424 20.866 ? ? ? C16 ZW1 38 1 non-polymer 1 ZW1 C17 C17 C 0 1 N N N N N N 35.818 -14.149 21.624 ? ? ? C17 ZW1 39 1 non-polymer 1 ZW1 O17 O13 O 0 1 N N N N N N 35.815 -14.047 22.892 ? ? ? O17 ZW1 40 1 non-polymer 1 ZW1 N18 N7 N 0 1 N N N N N N 35.063 -15.093 21.031 ? ? ? N18 ZW1 41 1 non-polymer 1 ZW1 C19 C18 C 0 1 N N S N N N 35.124 -15.309 19.654 ? ? ? C19 ZW1 42 1 non-polymer 1 ZW1 N19 N8 N 0 1 N N N N N N 34.294 -16.241 19.127 ? ? ? N19 ZW1 43 1 non-polymer 1 ZW1 N20 N9 N 0 1 N N N N N N 35.949 -14.581 18.881 ? ? ? N20 ZW1 44 1 non-polymer 1 ZW1 C21 C19 C 0 1 N N N N N N 36.732 -13.626 19.387 ? ? ? C21 ZW1 45 1 non-polymer 1 ZW1 N22 N10 N 0 1 N N N N N N 37.551 -12.910 18.609 ? ? ? N22 ZW1 46 1 non-polymer 1 ZW1 C23 C20 C 0 1 N N R N N N 38.289 -11.805 19.067 ? ? ? C23 ZW1 47 1 non-polymer 1 ZW1 MO MO1 MO ? 0 N N N N N N 40.588 -8.756 23.539 ? ? ? MO ZW1 48 2 non-polymer 1 ZW1 S S1 S 0 1 N N N N N N 41.857 -6.745 23.276 ? ? ? S ZW1 49 2 non-polymer 1 ZW1 PB1 P3 P 0 1 N N N N N N 36.146 -14.722 27.972 ? ? ? PB1 ZW1 50 3 non-polymer 1 ZW1 O2 O15 O 0 1 N N N N N N 36.413 -16.199 28.094 ? ? ? O2 ZW1 51 3 non-polymer 1 ZW1 O1 O14 O 0 1 N N N N N N 36.381 -14.046 26.645 ? ? ? O1 ZW1 52 3 non-polymer 1 ZW1 O3 O16 O 0 1 N N N N N N 37.014 -13.961 29.119 ? ? ? O3 ZW1 53 3 non-polymer 1 ZW1 O4 O17 O 0 1 N N N N N N 38.684 -12.071 29.195 ? ? ? O4 ZW1 54 3 non-polymer 1 ZW1 PA1 P4 P 0 1 N N N N N N 37.175 -12.458 29.684 ? ? ? PA1 ZW1 55 3 non-polymer 1 ZW1 O5 O18 O 0 1 N N N N N N 37.250 -12.595 31.199 ? ? ? O5 ZW1 56 3 non-polymer 1 ZW1 O7 O19 O 0 1 N N N N N N 36.148 -11.553 29.045 ? ? ? O7 ZW1 57 3 non-polymer 1 ZW1 O8 O20 O 0 1 N N N N N N 34.601 -14.408 28.351 ? ? ? O8 ZW1 58 3 non-polymer 1 ZW1 C1 C21 C 0 1 N N N N N N 33.821 -15.342 29.139 ? ? ? C1 ZW1 59 3 non-polymer 1 ZW1 C3 C22 C 0 1 N N R N N N 32.951 -14.490 30.061 ? ? ? C3 ZW1 60 3 non-polymer 1 ZW1 O9 O21 O 0 1 N N N N N N 31.908 -13.785 29.339 ? ? ? O9 ZW1 61 3 non-polymer 1 ZW1 C7 C23 C 0 1 N N S N N N 32.222 -15.405 31.056 ? ? ? C7 ZW1 62 3 non-polymer 1 ZW1 O10 O22 O 0 1 N N N N N N 32.759 -15.241 32.394 ? ? ? O10 ZW1 63 3 non-polymer 1 ZW1 C9 C24 C 0 1 N N R N N N 30.769 -14.884 30.926 ? ? ? C9 ZW1 64 3 non-polymer 1 ZW1 O12 O23 O 0 1 N N N N N N 30.108 -14.858 32.200 ? ? ? O12 ZW1 65 3 non-polymer 1 ZW1 C15 C25 C 0 1 N N R N N N 30.903 -13.509 30.313 ? ? ? C15 ZW1 66 3 non-polymer 1 ZW1 N91 N11 N 0 1 Y N N N N N 29.636 -13.204 29.696 ? ? ? N91 ZW1 67 3 non-polymer 1 ZW1 C81 C26 C 0 1 Y N N N N N 29.033 -13.908 28.604 ? ? ? C81 ZW1 68 3 non-polymer 1 ZW1 N71 N12 N 0 1 Y N N N N N 27.833 -13.358 28.344 ? ? ? N71 ZW1 69 3 non-polymer 1 ZW1 C51 C27 C 0 1 Y N N N N N 27.623 -12.263 29.175 ? ? ? C51 ZW1 70 3 non-polymer 1 ZW1 C61 C28 C 0 1 N N N N N N 26.608 -11.242 29.419 ? ? ? C61 ZW1 71 3 non-polymer 1 ZW1 O61 O24 O 0 1 N N N N N N 25.546 -11.239 28.802 ? ? ? O61 ZW1 72 3 non-polymer 1 ZW1 N11 N13 N 0 1 N N N N N N 26.952 -10.281 30.300 ? ? ? N11 ZW1 73 3 non-polymer 1 ZW1 C22 C29 C 0 1 N N N N N N 28.110 -10.273 31.018 ? ? ? C22 ZW1 74 3 non-polymer 1 ZW1 N21 N14 N 0 1 N N N N N N 28.313 -9.267 31.877 ? ? ? N21 ZW1 75 3 non-polymer 1 ZW1 N31 N15 N 0 1 N N N N N N 29.103 -11.194 30.919 ? ? ? N31 ZW1 76 3 non-polymer 1 ZW1 C41 C30 C 0 1 Y N N N N N 28.850 -12.107 29.959 ? ? ? C41 ZW1 77 3 non-polymer 1 ZW1 C18 C31 C 0 1 N N N N N N 38.854 -11.699 27.779 ? ? ? C18 ZW1 78 3 non-polymer 1 ZW1 C20 C32 C 0 1 N N R N N N 40.277 -11.125 27.811 ? ? ? C20 ZW1 79 3 non-polymer 1 ZW1 O13 O25 O 0 1 N N N N N N 41.255 -12.118 28.192 ? ? ? O13 ZW1 80 3 non-polymer 1 ZW1 C24 C33 C 0 1 N N N N N N 40.678 -10.581 26.449 ? ? ? C24 ZW1 81 3 non-polymer 1 ZW1 S1 S4 S 0 1 N N N N N N 39.601 -9.494 25.618 ? ? ? S1 ZW1 82 3 non-polymer 1 ZW1 C25 C34 C 0 1 N N N N N N 41.907 -10.735 25.907 ? ? ? C25 ZW1 83 3 non-polymer 1 ZW1 S2 S5 S 0 1 N N N N N N 42.411 -9.914 24.447 ? ? ? S2 ZW1 84 3 non-polymer 1 ZW1 C26 C35 C 0 1 N N R N N N 42.968 -11.556 26.567 ? ? ? C26 ZW1 85 3 non-polymer 1 ZW1 N4 N16 N 0 1 N N N N N N 43.001 -12.922 25.954 ? ? ? N4 ZW1 86 3 non-polymer 1 ZW1 C27 C36 C 0 1 N N N N N N 43.358 -14.017 26.719 ? ? ? C27 ZW1 87 3 non-polymer 1 ZW1 C28 C37 C 0 1 N N N N N N 43.500 -15.336 26.178 ? ? ? C28 ZW1 88 3 non-polymer 1 ZW1 O14 O26 O 0 1 N N N N N N 43.310 -15.503 24.971 ? ? ? O14 ZW1 89 3 non-polymer 1 ZW1 N5 N17 N 0 1 N N N N N N 43.796 -16.372 27.026 ? ? ? N5 ZW1 90 3 non-polymer 1 ZW1 C29 C38 C 0 1 N N N N N N 43.902 -16.177 28.339 ? ? ? C29 ZW1 91 3 non-polymer 1 ZW1 N6 N18 N 0 1 N N N N N N 44.195 -17.179 29.200 ? ? ? N6 ZW1 92 3 non-polymer 1 ZW1 N8 N19 N 0 1 N N N N N N 43.841 -14.905 28.890 ? ? ? N8 ZW1 93 3 non-polymer 1 ZW1 C30 C39 C 0 1 N N N N N N 43.528 -13.852 28.122 ? ? ? C30 ZW1 94 3 non-polymer 1 ZW1 N10 N20 N 0 1 N N N N N N 43.438 -12.637 28.754 ? ? ? N10 ZW1 95 3 non-polymer 1 ZW1 C31 C40 C 0 1 N N R N N N 42.607 -11.647 28.056 ? ? ? C31 ZW1 96 3 non-polymer 1 ZW1 H2 H2 H 0 1 N N N N N N 46.178 -15.635 18.883 ? ? ? H2 ZW1 97 1 non-polymer 1 ZW1 H3 H3 H 0 1 N N N N N N 44.669 -10.463 16.887 ? ? ? H3 ZW1 98 1 non-polymer 1 ZW1 H4 H4 H 0 1 N N N N N N 47.873 -11.628 16.918 ? ? ? H4 ZW1 99 1 non-polymer 1 ZW1 H5 H5 H 0 1 N N N N N N 48.292 -13.107 17.847 ? ? ? H5 ZW1 100 1 non-polymer 1 ZW1 H6 H6 H 0 1 N N N N N N 48.155 -12.970 14.791 ? ? ? H6 ZW1 101 1 non-polymer 1 ZW1 H7 H7 H 0 1 N N N N N N 48.327 -15.248 16.586 ? ? ? H7 ZW1 102 1 non-polymer 1 ZW1 H8 H8 H 0 1 N N N N N N 48.564 -16.269 14.455 ? ? ? H8 ZW1 103 1 non-polymer 1 ZW1 H9 H9 H 0 1 N N N N N N 50.580 -14.813 16.994 ? ? ? H9 ZW1 104 1 non-polymer 1 ZW1 H10 H10 H 0 1 N N N N N N 51.987 -15.945 15.499 ? ? ? H10 ZW1 105 1 non-polymer 1 ZW1 H11 H11 H 0 1 N N N N N N 50.786 -13.634 14.220 ? ? ? H11 ZW1 106 1 non-polymer 1 ZW1 H12 H12 H 0 1 N N N N N N 52.414 -13.809 17.814 ? ? ? H12 ZW1 107 1 non-polymer 1 ZW1 H13 H13 H 0 1 N N N N N N 54.602 -9.139 13.860 ? ? ? H13 ZW1 108 1 non-polymer 1 ZW1 H14 H14 H 0 1 N N N N N N 52.297 -10.417 11.579 ? ? ? H14 ZW1 109 1 non-polymer 1 ZW1 H15 H15 H 0 1 N N N N N N 53.563 -9.269 11.863 ? ? ? H15 ZW1 110 1 non-polymer 1 ZW1 H16 H16 H 0 1 N N N N N N 42.147 -12.219 20.075 ? ? ? H16 ZW1 111 1 non-polymer 1 ZW1 H17 H17 H 0 1 N N N N N N 42.701 -10.683 19.325 ? ? ? H17 ZW1 112 1 non-polymer 1 ZW1 H18 H18 H 0 1 N N N N N N 40.381 -10.295 18.375 ? ? ? H18 ZW1 113 1 non-polymer 1 ZW1 H19 H19 H 0 1 N N N N N N 36.918 -10.741 20.379 ? ? ? H19 ZW1 114 1 non-polymer 1 ZW1 H20 H20 H 0 1 N N N N N N 38.506 -12.834 21.582 ? ? ? H20 ZW1 115 1 non-polymer 1 ZW1 H23 H23 H 0 1 N N N N N N 34.438 -16.296 18.139 ? ? ? H23 ZW1 116 1 non-polymer 1 ZW1 H24 H24 H 0 1 N N N N N N 34.486 -17.131 19.542 ? ? ? H24 ZW1 117 1 non-polymer 1 ZW1 H25 H25 H 0 1 N N N N N N 38.223 -13.558 18.251 ? ? ? H25 ZW1 118 1 non-polymer 1 ZW1 H26 H26 H 0 1 N N N N N N 38.131 -10.960 18.380 ? ? ? H26 ZW1 119 1 non-polymer 1 ZW1 H21 H21 H 0 1 N N N N N N 37.208 -12.067 22.209 ? ? ? H21 ZW1 120 1 non-polymer 1 ZW1 H22 H22 H 0 1 N N N N N N 37.549 -14.203 20.997 ? ? ? H22 ZW1 121 1 non-polymer 1 ZW1 H49 H49 H 0 1 N N N N N N 35.907 -16.069 19.796 ? ? ? H49 ZW1 122 1 non-polymer 1 ZW1 H50 H50 H 0 1 N N N N N N 36.558 -15.233 18.430 ? ? ? H50 ZW1 123 1 non-polymer 1 ZW1 H1 H1 H 0 1 N N N N N N 42.842 -6.937 24.102 ? ? ? H1 ZW1 124 2 non-polymer 1 ZW1 H27 H27 H 0 1 N N N N N N 36.689 -14.685 26.013 ? ? ? H27 ZW1 125 3 non-polymer 1 ZW1 H28 H28 H 0 1 N N N N N N 35.624 -11.140 29.722 ? ? ? H28 ZW1 126 3 non-polymer 1 ZW1 H29 H29 H 0 1 N N N N N N 33.191 -15.962 28.484 ? ? ? H29 ZW1 127 3 non-polymer 1 ZW1 H30 H30 H 0 1 N N N N N N 34.484 -15.990 29.731 ? ? ? H30 ZW1 128 3 non-polymer 1 ZW1 H31 H31 H 0 1 N N N N N N 33.586 -13.781 30.614 ? ? ? H31 ZW1 129 3 non-polymer 1 ZW1 H32 H32 H 0 1 N N N N N N 32.279 -16.452 30.724 ? ? ? H32 ZW1 130 3 non-polymer 1 ZW1 H33 H33 H 0 1 N N N N N N 32.296 -15.814 32.994 ? ? ? H33 ZW1 131 3 non-polymer 1 ZW1 H34 H34 H 0 1 N N N N N N 30.223 -15.537 30.229 ? ? ? H34 ZW1 132 3 non-polymer 1 ZW1 H35 H35 H 0 1 N N N N N N 29.221 -14.535 32.091 ? ? ? H35 ZW1 133 3 non-polymer 1 ZW1 H36 H36 H 0 1 N N N N N N 31.212 -12.758 31.055 ? ? ? H36 ZW1 134 3 non-polymer 1 ZW1 H37 H37 H 0 1 N N N N N N 29.470 -14.743 28.076 ? ? ? H37 ZW1 135 3 non-polymer 1 ZW1 H38 H38 H 0 1 N N N N N N 26.314 -9.523 30.436 ? ? ? H38 ZW1 136 3 non-polymer 1 ZW1 H39 H39 H 0 1 N N N N N N 29.162 -9.223 32.404 ? ? ? H39 ZW1 137 3 non-polymer 1 ZW1 H40 H40 H 0 1 N N N N N N 27.616 -8.559 31.992 ? ? ? H40 ZW1 138 3 non-polymer 1 ZW1 H41 H41 H 0 1 N N N N N N 38.784 -12.575 27.118 ? ? ? H41 ZW1 139 3 non-polymer 1 ZW1 H42 H42 H 0 1 N N N N N N 38.118 -10.944 27.466 ? ? ? H42 ZW1 140 3 non-polymer 1 ZW1 H43 H43 H 0 1 N N N N N N 40.297 -10.297 28.535 ? ? ? H43 ZW1 141 3 non-polymer 1 ZW1 H44 H44 H 0 1 N N N N N N 43.948 -11.068 26.455 ? ? ? H44 ZW1 142 3 non-polymer 1 ZW1 H51 H51 H 0 1 N N N N N N 42.082 -13.103 25.603 ? ? ? H51 ZW1 143 3 non-polymer 1 ZW1 H52 H52 H 0 1 N N N N N N 43.935 -17.289 26.652 ? ? ? H52 ZW1 144 3 non-polymer 1 ZW1 H45 H45 H 0 1 N N N N N N 44.352 -16.978 30.167 ? ? ? H45 ZW1 145 3 non-polymer 1 ZW1 H46 H46 H 0 1 N N N N N N 44.255 -18.121 28.869 ? ? ? H46 ZW1 146 3 non-polymer 1 ZW1 H47 H47 H 0 1 N N N N N N 43.049 -12.786 29.663 ? ? ? H47 ZW1 147 3 non-polymer 1 ZW1 H48 H48 H 0 1 N N N N N N 42.723 -10.657 28.521 ? ? ? H48 ZW1 148 3 non-polymer 1 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_metal_coordination_flag _chem_comp_bond.pdbx_metal_pi_flag ZW1 MO S13 SING N N 1 Y N ZW1 MO S12 SING N N 2 Y N ZW1 MO S2 SING N N 3 Y N ZW1 MO S SING N N 4 Y N ZW1 MO S1 SING N N 5 Y N ZW1 PB O3B SING N N 6 N N ZW1 PB O1B DOUB N N 7 N N ZW1 PB O2B SING N N 8 N N ZW1 PB "O5'" SING N N 9 N N ZW1 O3B PA SING N N 10 N N ZW1 O3A C10 SING N N 11 N N ZW1 O3A PA SING N N 12 N N ZW1 PA O1A DOUB N N 13 N N ZW1 PA O2A SING N N 14 N N ZW1 "O5'" "C5'" SING N N 15 N N ZW1 "C5'" "C4'" SING N N 16 N N ZW1 "C4'" "C3'" SING N N 17 N N ZW1 "C4'" "O4'" SING N N 18 N N ZW1 "O4'" "C1'" SING N N 19 N N ZW1 "C3'" "O3'" SING N N 20 N N ZW1 "C3'" "C2'" SING N N 21 N N ZW1 "C2'" "O2'" SING N N 22 N N ZW1 "C2'" "C1'" SING N N 23 N N ZW1 "C1'" N9 SING N N 24 N N ZW1 N9 C4 SING Y N 25 N N ZW1 N9 C8 SING Y N 26 N N ZW1 C8 N7 DOUB Y N 27 N N ZW1 N7 C5 SING Y N 28 N N ZW1 C5 C4 DOUB Y N 29 N N ZW1 C5 C6 SING N N 30 N N ZW1 C6 O6 DOUB N N 31 N N ZW1 C6 N1 SING N N 32 N N ZW1 N1 C2 SING N N 33 N N ZW1 C2 N2 SING N N 34 N N ZW1 C2 N3 DOUB N N 35 N N ZW1 N3 C4 SING N N 36 N N ZW1 C10 C11 SING N N 37 N N ZW1 C11 O11 SING N N 38 N N ZW1 C11 C12 SING N N 39 N N ZW1 O11 C23 SING N N 40 N N ZW1 C12 C13 DOUB N N 41 N N ZW1 C12 S12 SING N N 42 N N ZW1 C13 C14 SING N N 43 N N ZW1 C13 S13 SING N N 44 N N ZW1 C14 C23 SING N N 45 N N ZW1 C14 N15 SING N N 46 N N ZW1 N15 C16 SING N N 47 N N ZW1 C16 C21 DOUB N N 48 N N ZW1 C16 C17 SING N N 49 N N ZW1 C17 N18 DOUB N N 50 N N ZW1 C17 O17 DOUB N N 51 N N ZW1 N18 C19 SING N N 52 N N ZW1 C19 N19 SING N N 53 N N ZW1 C19 N20 SING N N 54 N N ZW1 N20 C21 SING N N 55 N N ZW1 C21 N22 SING N N 56 N N ZW1 N22 C23 SING N N 57 N N ZW1 PB1 O2 DOUB N N 58 N N ZW1 PB1 O8 SING N N 59 N N ZW1 PB1 O1 SING N N 60 N N ZW1 PB1 O3 SING N N 61 N N ZW1 O3 PA1 SING N N 62 N N ZW1 O4 C18 SING N N 63 N N ZW1 O4 PA1 SING N N 64 N N ZW1 PA1 O5 DOUB N N 65 N N ZW1 PA1 O7 SING N N 66 N N ZW1 O8 C1 SING N N 67 N N ZW1 C1 C3 SING N N 68 N N ZW1 C3 O9 SING N N 69 N N ZW1 C3 C7 SING N N 70 N N ZW1 O9 C15 SING N N 71 N N ZW1 C7 C9 SING N N 72 N N ZW1 C7 O10 SING N N 73 N N ZW1 C9 C15 SING N N 74 N N ZW1 C9 O12 SING N N 75 N N ZW1 C15 N91 SING N N 76 N N ZW1 N91 C81 SING Y N 77 N N ZW1 N91 C41 SING Y N 78 N N ZW1 C81 N71 DOUB Y N 79 N N ZW1 N71 C51 SING Y N 80 N N ZW1 C51 C61 SING N N 81 N N ZW1 C51 C41 DOUB Y N 82 N N ZW1 C61 O61 DOUB N N 83 N N ZW1 C61 N11 SING N N 84 N N ZW1 N11 C22 SING N N 85 N N ZW1 C22 N31 DOUB N N 86 N N ZW1 C22 N21 SING N N 87 N N ZW1 N31 C41 SING N N 88 N N ZW1 C18 C20 SING N N 89 N N ZW1 C20 O13 SING N N 90 N N ZW1 C20 C24 SING N N 91 N N ZW1 O13 C31 SING N N 92 N N ZW1 C24 S1 SING N N 93 N N ZW1 C24 C25 DOUB N N 94 N N ZW1 C25 S2 SING N N 95 N N ZW1 C25 C26 SING N N 96 N N ZW1 C26 N4 SING N N 97 N N ZW1 C26 C31 SING N N 98 N N ZW1 N4 C27 SING N N 99 N N ZW1 C27 C28 SING N N 100 N N ZW1 C27 C30 DOUB N N 101 N N ZW1 C28 O14 DOUB N N 102 N N ZW1 C28 N5 SING N N 103 N N ZW1 N5 C29 SING N N 104 N N ZW1 C29 N6 SING N N 105 N N ZW1 C29 N8 DOUB N N 106 N N ZW1 N8 C30 SING N N 107 N N ZW1 C30 N10 SING N N 108 N N ZW1 N10 C31 SING N N 109 N N ZW1 S H1 SING N N 110 N N ZW1 O2B H2 SING N N 111 N N ZW1 O2A H3 SING N N 112 N N ZW1 "C5'" H4 SING N N 113 N N ZW1 "C5'" H5 SING N N 114 N N ZW1 "C4'" H6 SING N N 115 N N ZW1 "C3'" H7 SING N N 116 N N ZW1 "O3'" H8 SING N N 117 N N ZW1 "C2'" H9 SING N N 118 N N ZW1 "O2'" H10 SING N N 119 N N ZW1 "C1'" H11 SING N N 120 N N ZW1 C8 H12 SING N N 121 N N ZW1 N1 H13 SING N N 122 N N ZW1 N2 H14 SING N N 123 N N ZW1 N2 H15 SING N N 124 N N ZW1 C10 H16 SING N N 125 N N ZW1 C10 H17 SING N N 126 N N ZW1 C11 H18 SING N N 127 N N ZW1 C14 H19 SING N N 128 N N ZW1 N15 H20 SING N N 129 N N ZW1 N15 H21 SING N N 130 N N ZW1 C16 H22 SING N N 131 N N ZW1 N19 H23 SING N N 132 N N ZW1 N19 H24 SING N N 133 N N ZW1 N22 H25 SING N N 134 N N ZW1 C23 H26 SING N N 135 N N ZW1 O1 H27 SING N N 136 N N ZW1 O7 H28 SING N N 137 N N ZW1 C1 H29 SING N N 138 N N ZW1 C1 H30 SING N N 139 N N ZW1 C3 H31 SING N N 140 N N ZW1 C7 H32 SING N N 141 N N ZW1 O10 H33 SING N N 142 N N ZW1 C9 H34 SING N N 143 N N ZW1 O12 H35 SING N N 144 N N ZW1 C15 H36 SING N N 145 N N ZW1 C81 H37 SING N N 146 N N ZW1 N11 H38 SING N N 147 N N ZW1 N21 H39 SING N N 148 N N ZW1 N21 H40 SING N N 149 N N ZW1 C18 H41 SING N N 150 N N ZW1 C18 H42 SING N N 151 N N ZW1 C20 H43 SING N N 152 N N ZW1 C26 H44 SING N N 153 N N ZW1 N6 H45 SING N N 154 N N ZW1 N6 H46 SING N N 155 N N ZW1 N10 H47 SING N N 156 N N ZW1 C31 H48 SING N N 157 N N ZW1 C19 H49 SING N N 158 N N ZW1 N20 H50 SING N N 159 N N ZW1 N4 H51 SING N N 160 N N ZW1 N5 H52 SING N N 161 N N # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZW1 InChI InChI 1.06 "InChI=1S/C20H29N10O13P2S2.C20H26N10O13P2S2.Mo.H2S/c2*21-19-26-13-7(15(33)28-19)24-6-12(47)11(46)5(41-17(6)25-13)2-40-45(37,38)43-44(35,36)39-1-4-9(31)10(32)18(42-4)30-3-23-8-14(30)27-20(22)29-16(8)34;;/h3-7,9-10,17-19,25-26,31-32,46-47H,1-2,21,24H2,(H,35,36)(H,37,38)(H3,22,27,29,34);3-6,9-10,17-18,24,31-32,46-47H,1-2H2,(H,35,36)(H,37,38)(H3,22,27,29,34)(H4,21,25,26,28,33);;1H2/q;;+5;/p-5/t4-,5-,6+,9-,10-,17-,18-,19-;4-,5-,6+,9-,10-,17-,18-;;/m11../s1" ZW1 InChIKey InChI 1.06 JWDZSGNBWONICV-ZUQALOOUSA-I ZW1 SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1NC2=[C@@H]([NH2][C@@H]3[C@H](N2)O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6C(=O)NC(=Nc56)N)C7=C3S[Mo]8(S)(SC9=C(S8)[C@@H]%10NC%11=C(N[C@@H]%10O[C@@H]9CO[P](O)(=O)O[P](O)(=O)OC[C@H]%12O[C@H]([C@H](O)[C@@H]%12O)n%13cnc%14C(=O)NC(=Nc%13%14)N)N=C(N)NC%11=O)S7)[C](=N1)=O" ZW1 SMILES CACTVS 3.385 "N[CH]1NC2=[CH]([NH2][CH]3[CH](N2)O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6C(=O)NC(=Nc56)N)C7=C3S[Mo]8(S)(SC9=C(S8)[CH]%10NC%11=C(N[CH]%10O[CH]9CO[P](O)(=O)O[P](O)(=O)OC[CH]%12O[CH]([CH](O)[CH]%12O)n%13cnc%14C(=O)NC(=Nc%13%14)N)N=C(N)NC%11=O)S7)[C](=N1)=O" ZW1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4C5=C([C@H]6[C@@H](O4)NC7=[CH]([NH2]6)C(=NC(N7)N)=O)S[Mo]8(S5)(SC9=C(S8)[C@H]1[C@H](NC3=C(N1)C(=O)NC(=N3)N)O[C@@H]9COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n1cnc3c1N=C(NC3=O)N)O)O)S)O)O)N=C(NC2=O)N" ZW1 SMILES "OpenEye OEToolkits" 2.0.7 "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C5=C(C6C(O4)NC7=[CH]([NH2]6)C(=NC(N7)N)=O)S[Mo]8(S5)(SC9=C(S8)C1C(NC3=C(N1)C(=O)NC(=N3)N)OC9COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n1cnc3c1N=C(NC3=O)N)O)O)S)O)O)N=C(NC2=O)N" # _pdbx_chem_comp_identifier.comp_id ZW1 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier ;[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(1~{R},1'~{R},10~{R},10'~{R},16~{R},16'~{R})-5,5'-bis(azanyl)-16'-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-7,7'-bis(oxidanylidene)-13-sulfanyl-spiro[17-oxa-12$l^{3},14$l^{3}-dithia-2,4,6,9$l^{4}-tetraza-13$l^{5}-molybdatetracyclo[8.7.0.0^{3,8}.0^{11,15}]heptadeca-3,5,11,14-tetraene-13,13'-17-oxa-12$l^{3},14$l^{3}-dithia-2,4,6,9-tetraza-13$l^{5}-molybdatetracyclo[8.7.0.0^{3,8}.0^{11,15}]heptadeca-3,5,8,11,14-pentaene]-16-yl]methyl hydrogen phosphate ; # _pdbx_chem_comp_atom_coordination.geometry_id 1 _pdbx_chem_comp_atom_coordination.comp_id ZW1 _pdbx_chem_comp_atom_coordination.atom_id MO _pdbx_chem_comp_atom_coordination.number 6 _pdbx_chem_comp_atom_coordination.geometry_calculated "trigonal prism" _pdbx_chem_comp_atom_coordination.geometry_generic "trigonal prismatic" _pdbx_chem_comp_atom_coordination.geometry_abbr TPR _pdbx_chem_comp_atom_coordination.provenance FindGeo _pdbx_chem_comp_atom_coordination.representative_entry_id 3ML1 # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id ZW1 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Metal coordination" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom MO _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? _pdbx_chem_comp_pcm.position "Amino-acid side chain" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZW1 "Create component" 2026-04-20 RCSB ZW1 "Other modification" 2026-07-31 RCSB ZW1 "Initial release" 2026-08-12 RCSB #