data_ZX0 # _chem_comp.id ZX0 _chem_comp.name "(3R)-1-[(4S)-azepan-4-ylcarbamoyl]-3-(sulfoamino)-L-proline" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H22 N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-12-03 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 350.391 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZX0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WZX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZX0 S1 S1 S 0 1 N N N N N N 1.544 10.333 18.391 -4.774 -0.424 0.233 S1 ZX0 1 ZX0 O2 O2 O 0 1 N N N N N N 1.439 10.663 16.981 -5.009 -1.837 -0.282 O2 ZX0 2 ZX0 O3 O3 O 0 1 N N N N N N 0.817 11.223 19.277 -5.267 0.456 -0.768 O3 ZX0 3 ZX0 O4 O4 O 0 1 N N N N N N 1.290 8.924 18.631 -5.232 -0.406 1.578 O4 ZX0 4 ZX0 N5 N5 N 0 1 N N N N N N 3.201 10.534 18.775 -3.135 -0.191 0.293 N5 ZX0 5 ZX0 C6 C6 C 0 1 N N R N N N 3.688 11.902 19.051 -2.349 -0.189 -0.943 C6 ZX0 6 ZX0 C7 C7 C 0 1 N N N N N N 3.584 12.821 17.847 -1.721 -1.585 -1.196 C7 ZX0 7 ZX0 C8 C8 C 0 1 N N N N N N 4.833 13.688 17.903 -0.452 -1.520 -0.311 C8 ZX0 8 ZX0 N9 N9 N 0 1 N N N N N N 5.750 12.935 18.723 0.023 -0.129 -0.433 N9 ZX0 9 ZX0 C10 C10 C 0 1 N N S N N N 5.164 11.760 19.281 -1.115 0.726 -0.804 C10 ZX0 10 ZX0 C11 C11 C 0 1 N N N N N N 5.588 10.609 18.422 -1.356 1.753 0.273 C11 ZX0 11 ZX0 O12 O12 O 0 1 N N N N N N 5.717 10.537 17.202 -0.891 1.592 1.376 O12 ZX0 12 ZX0 C13 C13 C 0 1 N N N N N N 7.105 13.133 18.843 1.288 0.289 -0.236 C13 ZX0 13 ZX0 O14 O14 O 0 1 N N N N N N 7.841 12.252 19.266 1.567 1.465 -0.364 O14 ZX0 14 ZX0 N15 N15 N 0 1 N N N N N N 7.518 14.382 18.466 2.246 -0.597 0.103 N15 ZX0 15 ZX0 C16 C16 C 0 1 N N S N N N 8.924 14.667 18.342 3.622 -0.143 0.317 C16 ZX0 16 ZX0 C17 C17 C 0 1 N N N N N N 9.190 14.982 16.887 4.297 -1.080 1.208 C17 ZX0 17 ZX0 C18 C18 C 0 1 N N N N N N 10.654 15.269 16.646 5.745 -0.647 1.521 C18 ZX0 18 ZX0 C19 C19 C 0 1 N N N N N N 10.932 16.759 16.738 6.615 -1.007 0.348 C19 ZX0 19 ZX0 N20 N20 N 0 1 N N N N N N 10.809 17.262 18.137 6.773 0.107 -0.613 N20 ZX0 20 ZX0 C21 C21 C 0 1 N N N N N N 10.711 16.230 19.205 5.532 0.864 -0.890 C21 ZX0 21 ZX0 C22 C22 C 0 1 N N N N N N 9.259 15.810 19.285 4.329 -0.025 -1.049 C22 ZX0 22 ZX0 OX0 OX0 O 0 1 N Y N N N N 5.963 9.324 19.289 -2.088 2.846 0.005 OX0 ZX0 23 ZX0 H2 H2 H 0 1 N N N N N N 1.416 11.607 16.877 -5.942 -2.078 -0.357 H2 ZX0 24 ZX0 H5 H5 H 0 1 N N N N N N 3.373 9.995 19.600 -2.696 -0.056 1.148 H5 ZX0 25 ZX0 H6 H6 H 0 1 N N N N N N 3.099 12.319 19.882 -2.965 0.116 -1.789 H6 ZX0 26 ZX0 H71C H71C H 0 0 N N N N N N 3.548 12.243 16.912 -2.389 -2.380 -0.864 H71C ZX0 27 ZX0 H72C H72C H 0 0 N N N N N N 2.664 13.424 17.869 -1.459 -1.710 -2.247 H72C ZX0 28 ZX0 H10 H10 H 0 1 N N N N N N 5.438 11.619 20.337 -0.911 1.222 -1.753 H10 ZX0 29 ZX0 H81C H81C H 0 0 N N N N N N 5.245 13.859 16.898 -0.701 -1.747 0.726 H81C ZX0 30 ZX0 H82C H82C H 0 0 N N N N N N 4.630 14.689 18.312 0.304 -2.212 -0.681 H82C ZX0 31 ZX0 HX0 HX0 H 0 1 N N N N N N 6.255 8.627 18.713 -2.215 3.476 0.728 HX0 ZX0 32 ZX0 H15 H15 H 0 1 N N N N N N 6.844 15.096 18.277 2.024 -1.536 0.205 H15 ZX0 33 ZX0 H16 H16 H 0 1 N N N N N N 9.567 13.821 18.625 3.600 0.840 0.788 H16 ZX0 34 ZX0 H171 H171 H 0 0 N N N N N N 8.892 14.118 16.276 3.738 -1.146 2.141 H171 ZX0 35 ZX0 H172 H172 H 0 0 N N N N N N 8.610 15.876 16.613 4.316 -2.063 0.739 H172 ZX0 36 ZX0 H221 H221 H 0 0 N N N N N N 8.633 16.674 19.019 4.646 -1.013 -1.383 H221 ZX0 37 ZX0 H222 H222 H 0 0 N N N N N N 9.069 15.462 20.311 3.646 0.409 -1.779 H222 ZX0 38 ZX0 H181 H181 H 0 0 N N N N N N 11.252 14.745 17.405 5.777 0.430 1.684 H181 ZX0 39 ZX0 H182 H182 H 0 0 N N N N N N 10.922 14.921 15.638 6.098 -1.166 2.412 H182 ZX0 40 ZX0 H191 H191 H 0 0 N N N N N N 11.956 16.949 16.384 7.599 -1.296 0.716 H191 ZX0 41 ZX0 H192 H192 H 0 0 N N N N N N 10.190 17.285 16.119 6.172 -1.858 -0.170 H192 ZX0 42 ZX0 H20 H20 H 0 1 N N N N N N 11.624 17.809 18.328 7.518 0.726 -0.330 H20 ZX0 43 ZX0 H211 H211 H 0 0 N N N N N N 11.345 15.365 18.959 5.351 1.556 -0.067 H211 ZX0 44 ZX0 H212 H212 H 0 0 N N N N N N 11.055 16.632 20.169 5.668 1.439 -1.806 H212 ZX0 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZX0 S1 O2 SING N N 1 ZX0 S1 O3 DOUB N N 2 ZX0 S1 O4 DOUB N N 3 ZX0 S1 N5 SING N N 4 ZX0 N5 C6 SING N N 5 ZX0 C6 C7 SING N N 6 ZX0 C6 C10 SING N N 7 ZX0 C7 C8 SING N N 8 ZX0 C8 N9 SING N N 9 ZX0 N9 C10 SING N N 10 ZX0 N9 C13 SING N N 11 ZX0 C10 C11 SING N N 12 ZX0 C11 O12 DOUB N N 13 ZX0 C11 OX0 SING N N 14 ZX0 C13 O14 DOUB N N 15 ZX0 C13 N15 SING N N 16 ZX0 N15 C16 SING N N 17 ZX0 C16 C17 SING N N 18 ZX0 C16 C22 SING N N 19 ZX0 C17 C18 SING N N 20 ZX0 C18 C19 SING N N 21 ZX0 C19 N20 SING N N 22 ZX0 N20 C21 SING N N 23 ZX0 C21 C22 SING N N 24 ZX0 O2 H2 SING N N 25 ZX0 N5 H5 SING N N 26 ZX0 C6 H6 SING N N 27 ZX0 C7 H71C SING N N 28 ZX0 C7 H72C SING N N 29 ZX0 C10 H10 SING N N 30 ZX0 C8 H81C SING N N 31 ZX0 C8 H82C SING N N 32 ZX0 OX0 HX0 SING N N 33 ZX0 N15 H15 SING N N 34 ZX0 C16 H16 SING N N 35 ZX0 C17 H171 SING N N 36 ZX0 C17 H172 SING N N 37 ZX0 C22 H221 SING N N 38 ZX0 C22 H222 SING N N 39 ZX0 C18 H181 SING N N 40 ZX0 C18 H182 SING N N 41 ZX0 C19 H191 SING N N 42 ZX0 C19 H192 SING N N 43 ZX0 N20 H20 SING N N 44 ZX0 C21 H211 SING N N 45 ZX0 C21 H212 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZX0 SMILES ACDLabs 10.04 "O=S(=O)(O)NC2C(C(=O)O)N(C(=O)NC1CCCNCC1)CC2" ZX0 SMILES_CANONICAL CACTVS 3.352 "OC(=O)[C@@H]1[C@@H](CCN1C(=O)N[C@H]2CCCNCC2)N[S](O)(=O)=O" ZX0 SMILES CACTVS 3.352 "OC(=O)[CH]1[CH](CCN1C(=O)N[CH]2CCCNCC2)N[S](O)(=O)=O" ZX0 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C1C[C@@H](CCNC1)NC(=O)N2CC[C@H]([C@H]2C(=O)O)NS(=O)(=O)O" ZX0 SMILES "OpenEye OEToolkits" 1.6.1 "C1CC(CCNC1)NC(=O)N2CCC(C2C(=O)O)NS(=O)(=O)O" ZX0 InChI InChI 1.03 "InChI=1S/C12H22N4O6S/c17-11(18)10-9(15-23(20,21)22)4-7-16(10)12(19)14-8-2-1-5-13-6-3-8/h8-10,13,15H,1-7H2,(H,14,19)(H,17,18)(H,20,21,22)/t8-,9+,10-/m0/s1" ZX0 InChIKey InChI 1.03 WWLDRJMXWRULQB-AEJSXWLSSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZX0 "SYSTEMATIC NAME" ACDLabs 10.04 "(3R)-1-[(4S)-azepan-4-ylcarbamoyl]-3-(sulfoamino)-L-proline" ZX0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,3R)-1-[[(4S)-azepan-4-yl]carbamoyl]-3-(sulfoamino)pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZX0 "Create component" 2009-12-03 EBI ZX0 "Modify descriptor" 2011-06-04 RCSB ZX0 "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id ZX0 _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C11 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #