data_ZYD # _chem_comp.id ZYD _chem_comp.name "(1R,3S,5Z)-5-{(2E)-2-[(3aR,7aS)-7a-(7-hydroxy-7-methyloctyl)octahydro-4H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexane-1,3-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H44 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-10-27 _chem_comp.pdbx_modified_date 2011-08-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 416.636 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZYD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3P8X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZYD C1 C1 C 0 1 N N S 13.992 17.617 35.199 3.938 2.518 -1.608 C1 ZYD 1 ZYD O1 O1 O 0 1 N N N 13.000 17.058 36.076 2.534 2.751 -1.744 O1 ZYD 2 ZYD C2 C2 C 0 1 N N N 14.619 16.527 34.281 4.559 3.611 -0.732 C2 ZYD 3 ZYD O2 O2 O 0 1 N N N 16.773 17.712 34.154 4.422 4.674 1.432 O2 ZYD 4 ZYD C3 C3 C 0 1 N N R 15.711 17.173 33.343 3.947 3.563 0.668 C3 ZYD 5 ZYD O3 O3 O 0 1 N N N 4.358 26.326 34.551 -6.724 2.326 -1.451 O3 ZYD 6 ZYD C4 C4 C 0 1 N N N 15.109 18.324 32.443 4.345 2.258 1.365 C4 ZYD 7 ZYD C5 C5 C 0 1 N N N 14.311 19.332 33.312 3.878 1.098 0.508 C5 ZYD 8 ZYD C6 C6 C 0 1 N N N 14.498 20.664 33.120 3.228 0.043 1.040 C6 ZYD 9 ZYD C7 C7 C 0 1 N N N 13.807 21.771 33.910 2.793 -1.059 0.179 C7 ZYD 10 ZYD C8 C8 C 0 1 N N N 13.640 23.018 33.418 2.150 -2.102 0.705 C8 ZYD 11 ZYD C9 C9 C 0 1 N N N 14.123 23.411 32.000 1.840 -2.204 2.191 C9 ZYD 12 ZYD C10 C10 C 0 1 N N N 13.377 18.703 34.338 4.171 1.179 -0.938 C10 ZYD 13 ZYD C11 C11 C 0 1 N N N 12.976 24.162 31.229 0.367 -2.540 2.414 C11 ZYD 14 ZYD C12 C12 C 0 1 N N N 12.245 25.268 32.099 -0.087 -3.721 1.541 C12 ZYD 15 ZYD C13 C13 C 0 1 N N R 11.753 24.725 33.504 0.145 -3.337 0.098 C13 ZYD 16 ZYD C14 C14 C 0 1 N N R 12.955 24.139 34.234 1.676 -3.256 -0.127 C14 ZYD 17 ZYD C15 C15 C 0 1 N N N 12.446 23.771 35.645 1.742 -3.081 -1.646 C15 ZYD 18 ZYD C16 C16 C 0 1 N N N 11.356 24.886 35.889 0.669 -4.085 -2.154 C16 ZYD 19 ZYD C17 C17 C 0 1 N N N 11.294 25.743 34.556 -0.317 -4.297 -0.988 C17 ZYD 20 ZYD C18 C18 C 0 1 N N N 10.610 23.628 33.288 -0.473 -1.962 -0.164 C18 ZYD 21 ZYD C19 C19 C 0 1 N N N 12.073 19.041 34.441 4.617 0.125 -1.621 C19 ZYD 22 ZYD C20 C20 C 0 1 N N N 9.582 23.996 32.173 -1.973 -2.011 0.133 C20 ZYD 23 ZYD C21 C21 C 0 1 N N N 8.349 24.676 32.787 -2.590 -0.636 -0.130 C21 ZYD 24 ZYD C22 C22 C 0 1 N N N 7.213 24.747 31.744 -4.090 -0.685 0.168 C22 ZYD 25 ZYD C23 C23 C 0 1 N N N 5.989 25.432 32.383 -4.707 0.690 -0.095 C23 ZYD 26 ZYD C24 C24 C 0 1 N N N 5.236 24.421 33.282 -6.207 0.641 0.203 C24 ZYD 27 ZYD C25 C25 C 0 1 N N N 4.006 25.064 33.966 -6.824 2.016 -0.060 C25 ZYD 28 ZYD C26 C26 C 0 1 N N N 2.864 25.265 32.947 -6.076 3.075 0.753 C26 ZYD 29 ZYD C27 C27 C 0 1 N N N 3.532 24.118 35.077 -8.297 2.002 0.355 C27 ZYD 30 ZYD H1 H1 H 0 1 N N N 14.787 18.045 35.827 4.408 2.524 -2.592 H1 ZYD 31 ZYD HO1 HO1 H 0 1 N N N 12.636 17.745 36.622 2.078 2.094 -2.288 HO1 ZYD 32 ZYD H2 H2 H 0 1 N N N 15.089 15.752 34.905 5.635 3.451 -0.663 H2 ZYD 33 ZYD H2A H2A H 0 1 N N N 13.830 16.075 33.662 4.367 4.586 -1.179 H2A ZYD 34 ZYD HO2 HO2 H 0 1 N N N 17.433 18.102 33.593 4.074 4.708 2.334 HO2 ZYD 35 ZYD H3 H3 H 0 1 N N N 16.092 16.386 32.676 2.861 3.615 0.590 H3 ZYD 36 ZYD HO3 HO3 H 0 1 N N N 3.593 26.707 34.966 -7.097 3.185 -1.691 HO3 ZYD 37 ZYD H4 H4 H 0 1 N N N 15.930 18.854 31.939 5.428 2.218 1.479 H4 ZYD 38 ZYD H4A H4A H 0 1 N N N 14.436 17.881 31.694 3.870 2.205 2.345 H4A ZYD 39 ZYD H6 H6 H 0 1 N N N 15.191 20.963 32.347 3.028 0.010 2.101 H6 ZYD 40 ZYD H7 H7 H 0 1 N N N 13.437 21.549 34.900 2.993 -1.027 -0.882 H7 ZYD 41 ZYD H9 H9 H 0 1 N N N 14.998 24.073 32.085 2.457 -2.985 2.634 H9 ZYD 42 ZYD H9A H9A H 0 1 N N N 14.399 22.502 31.445 2.068 -1.252 2.671 H9A ZYD 43 ZYD H11 H11 H 0 1 N N N 13.420 24.655 30.351 0.215 -2.795 3.463 H11 ZYD 44 ZYD H11A H11A H 0 0 N N N 12.226 23.418 30.921 -0.238 -1.666 2.171 H11A ZYD 45 ZYD H12 H12 H 0 1 N N N 12.952 26.092 32.275 0.496 -4.609 1.786 H12 ZYD 46 ZYD H12A H12A H 0 0 N N N 11.367 25.624 31.539 -1.147 -3.918 1.706 H12A ZYD 47 ZYD H14 H14 H 0 1 N N N 13.786 24.851 34.349 2.162 -4.181 0.184 H14 ZYD 48 ZYD H15 H15 H 0 1 N N N 12.019 22.758 35.682 1.481 -2.062 -1.929 H15 ZYD 49 ZYD H15A H15A H 0 0 N N N 13.248 23.802 36.397 2.729 -3.348 -2.023 H15A ZYD 50 ZYD H16 H16 H 0 1 N N N 10.378 24.430 36.102 0.150 -3.673 -3.020 H16 ZYD 51 ZYD H16A H16A H 0 0 N N N 11.636 25.520 36.743 1.138 -5.034 -2.415 H16A ZYD 52 ZYD H17 H17 H 0 1 N N N 11.955 26.621 34.598 -0.276 -5.325 -0.627 H17 ZYD 53 ZYD H17A H17A H 0 0 N N N 10.280 26.119 34.353 -1.328 -4.047 -1.309 H17A ZYD 54 ZYD H18 H18 H 0 1 N N N 11.095 22.682 33.005 0.002 -1.222 0.480 H18 ZYD 55 ZYD H18A H18A H 0 0 N N N 10.060 23.518 34.235 -0.318 -1.688 -1.208 H18A ZYD 56 ZYD H19 H19 H 0 1 N N N 11.654 19.785 33.780 4.823 0.213 -2.678 H19 ZYD 57 ZYD H19A H19A H 0 0 N N N 11.449 18.567 35.185 4.774 -0.818 -1.117 H19A ZYD 58 ZYD H20 H20 H 0 1 N N N 10.056 24.684 31.458 -2.447 -2.751 -0.512 H20 ZYD 59 ZYD H20A H20A H 0 0 N N N 9.268 23.078 31.654 -2.127 -2.286 1.176 H20A ZYD 60 ZYD H21 H21 H 0 1 N N N 8.009 24.095 33.657 -2.116 0.104 0.515 H21 ZYD 61 ZYD H21A H21A H 0 0 N N N 8.616 25.695 33.104 -2.435 -0.361 -1.173 H21A ZYD 62 ZYD H22 H22 H 0 1 N N N 7.548 25.327 30.871 -4.564 -1.425 -0.477 H22 ZYD 63 ZYD H22A H22A H 0 0 N N N 6.942 23.731 31.423 -4.245 -0.960 1.211 H22A ZYD 64 ZYD H23 H23 H 0 1 N N N 6.324 26.284 32.993 -4.233 1.430 0.550 H23 ZYD 65 ZYD H23A H23A H 0 0 N N N 5.315 25.789 31.590 -4.552 0.965 -1.138 H23A ZYD 66 ZYD H24 H24 H 0 1 N N N 4.894 23.582 32.659 -6.681 -0.099 -0.442 H24 ZYD 67 ZYD H24A H24A H 0 0 N N N 5.924 24.061 34.061 -6.362 0.367 1.246 H24A ZYD 68 ZYD H26 H26 H 0 1 N N N 2.596 24.296 32.500 -6.515 4.055 0.566 H26 ZYD 69 ZYD H26A H26A H 0 0 N N N 1.987 25.688 33.458 -6.152 2.839 1.814 H26A ZYD 70 ZYD H26B H26B H 0 0 N N N 3.195 25.954 32.156 -5.026 3.085 0.457 H26B ZYD 71 ZYD H27 H27 H 0 1 N N N 3.259 23.146 34.640 -8.830 1.248 -0.224 H27 ZYD 72 ZYD H27A H27A H 0 0 N N N 4.342 23.977 35.808 -8.373 1.766 1.417 H27A ZYD 73 ZYD H27B H27B H 0 0 N N N 2.656 24.553 35.580 -8.736 2.982 0.168 H27B ZYD 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZYD C1 O1 SING N N 1 ZYD C1 C2 SING N N 2 ZYD C1 C10 SING N N 3 ZYD C2 C3 SING N N 4 ZYD O2 C3 SING N N 5 ZYD C3 C4 SING N N 6 ZYD O3 C25 SING N N 7 ZYD C4 C5 SING N N 8 ZYD C5 C6 DOUB N N 9 ZYD C5 C10 SING N N 10 ZYD C6 C7 SING N N 11 ZYD C7 C8 DOUB N N 12 ZYD C8 C9 SING N N 13 ZYD C8 C14 SING N N 14 ZYD C9 C11 SING N N 15 ZYD C10 C19 DOUB N N 16 ZYD C11 C12 SING N N 17 ZYD C12 C13 SING N Z 18 ZYD C13 C14 SING N N 19 ZYD C13 C17 SING N N 20 ZYD C13 C18 SING N N 21 ZYD C14 C15 SING N E 22 ZYD C15 C16 SING N N 23 ZYD C16 C17 SING N N 24 ZYD C18 C20 SING N N 25 ZYD C20 C21 SING N N 26 ZYD C21 C22 SING N N 27 ZYD C22 C23 SING N N 28 ZYD C23 C24 SING N N 29 ZYD C24 C25 SING N N 30 ZYD C25 C26 SING N N 31 ZYD C25 C27 SING N N 32 ZYD C1 H1 SING N N 33 ZYD O1 HO1 SING N N 34 ZYD C2 H2 SING N N 35 ZYD C2 H2A SING N N 36 ZYD O2 HO2 SING N N 37 ZYD C3 H3 SING N N 38 ZYD O3 HO3 SING N N 39 ZYD C4 H4 SING N N 40 ZYD C4 H4A SING N N 41 ZYD C6 H6 SING N N 42 ZYD C7 H7 SING N N 43 ZYD C9 H9 SING N N 44 ZYD C9 H9A SING N N 45 ZYD C11 H11 SING N N 46 ZYD C11 H11A SING N N 47 ZYD C12 H12 SING N N 48 ZYD C12 H12A SING N N 49 ZYD C14 H14 SING N N 50 ZYD C15 H15 SING N N 51 ZYD C15 H15A SING N N 52 ZYD C16 H16 SING N N 53 ZYD C16 H16A SING N N 54 ZYD C17 H17 SING N N 55 ZYD C17 H17A SING N N 56 ZYD C18 H18 SING N N 57 ZYD C18 H18A SING N N 58 ZYD C19 H19 SING N N 59 ZYD C19 H19A SING N N 60 ZYD C20 H20 SING N N 61 ZYD C20 H20A SING N N 62 ZYD C21 H21 SING N N 63 ZYD C21 H21A SING N N 64 ZYD C22 H22 SING N N 65 ZYD C22 H22A SING N N 66 ZYD C23 H23 SING N N 67 ZYD C23 H23A SING N N 68 ZYD C24 H24 SING N N 69 ZYD C24 H24A SING N N 70 ZYD C26 H26 SING N N 71 ZYD C26 H26A SING N N 72 ZYD C26 H26B SING N N 73 ZYD C27 H27 SING N N 74 ZYD C27 H27A SING N N 75 ZYD C27 H27B SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZYD SMILES ACDLabs 12.01 "OC3C(=C)\C(=C/C=C1\CCCC2(CCCCCCC(O)(C)C)CCCC12)CC(O)C3" ZYD SMILES_CANONICAL CACTVS 3.370 "CC(C)(O)CCCCCC[C@@]12CCC[C@H]1C(/CCC2)=C/C=C3/C[C@@H](O)C[C@H](O)C3=C" ZYD SMILES CACTVS 3.370 "CC(C)(O)CCCCCC[C]12CCC[CH]1C(CCC2)=CC=C3C[CH](O)C[CH](O)C3=C" ZYD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)(CCCCCC[C@@]12CCC[C@H]1/C(=C/C=C\3/C[C@H](C[C@@H](C3=C)O)O)/CCC2)O" ZYD SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)(CCCCCCC12CCCC1C(=CC=C3CC(CC(C3=C)O)O)CCC2)O" ZYD InChI InChI 1.03 "InChI=1S/C27H44O3/c1-20-22(18-23(28)19-25(20)29)13-12-21-10-8-16-27(17-9-11-24(21)27)15-7-5-4-6-14-26(2,3)30/h12-13,23-25,28-30H,1,4-11,14-19H2,2-3H3/b21-12+,22-13-/t23-,24+,25+,27-/m1/s1" ZYD InChIKey InChI 1.03 FJGYNKGWOKETAA-AXVRRUDCSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZYD "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,3S,5Z)-5-{(2E)-2-[(3aR,7aS)-7a-(7-hydroxy-7-methyloctyl)octahydro-4H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexane-1,3-diol (non-preferred name)" ZYD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(1R,3S,5Z)-5-[(2E)-2-[(3aR,7aS)-7a-(7-hydroxy-7-methyl-octyl)-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZYD "Create component" 2010-10-27 RCSB ZYD "Modify descriptor" 2011-06-04 RCSB #