data_ZYM
#
_chem_comp.id ZYM
_chem_comp.name "2,4-dioxo-4-{[3-(3-phenoxyphenyl)propyl]amino}butanoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H19 N O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-10-21
_chem_comp.pdbx_modified_date 2012-06-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 341.358
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ZYM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3P00
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZYM OAA OAA O 0 1 N N N 23.122 -4.985 8.082 -8.985 0.958 0.057 OAA ZYM 1
ZYM OAB OAB O 0 1 N N N 26.108 -7.177 4.826 -4.358 0.346 -1.489 OAB ZYM 2
ZYM OAC OAC O 0 1 N N N 23.383 -3.829 6.268 -7.895 0.291 1.868 OAC ZYM 3
ZYM OAD OAD O 0 1 N N N 24.829 -5.289 5.100 -6.546 0.751 -1.239 OAD ZYM 4
ZYM CAE CAE C 0 1 N N N 25.024 -6.912 6.748 -5.321 0.038 0.643 CAE ZYM 5
ZYM CAF CAF C 0 1 Y N N 25.201 -15.927 12.254 7.677 1.887 -0.876 CAF ZYM 6
ZYM CAG CAG C 0 1 Y N N 26.564 -15.924 12.051 6.830 0.948 -1.435 CAG ZYM 7
ZYM CAH CAH C 0 1 Y N N 24.401 -15.182 11.442 7.518 2.266 0.444 CAH ZYM 8
ZYM CAI CAI C 0 1 Y N N 28.454 -10.637 10.160 3.359 -2.977 0.260 CAI ZYM 9
ZYM CAJ CAJ C 0 1 Y N N 28.956 -10.245 8.947 2.207 -2.573 -0.388 CAJ ZYM 10
ZYM CAK CAK C 0 1 Y N N 27.123 -15.167 11.049 5.818 0.391 -0.678 CAK ZYM 11
ZYM CAL CAL C 0 1 Y N N 24.968 -14.450 10.427 6.508 1.711 1.206 CAL ZYM 12
ZYM CAM CAM C 0 1 Y N N 27.723 -11.792 10.268 4.181 -2.042 0.859 CAM ZYM 13
ZYM CAN CAN C 0 1 Y N N 28.026 -12.164 7.919 2.691 -0.293 0.159 CAN ZYM 14
ZYM CAO CAO C 0 1 N N N 28.602 -9.297 6.041 -0.550 -0.785 -0.153 CAO ZYM 15
ZYM CAP CAP C 0 1 N N N 27.236 -9.582 5.441 -1.826 -0.341 -0.871 CAP ZYM 16
ZYM CAQ CAQ C 0 1 N N N 29.329 -10.542 6.532 0.616 -0.795 -1.145 CAQ ZYM 17
ZYM NAR NAR N 0 1 N N N 26.343 -8.773 6.258 -2.942 -0.332 0.078 NAR ZYM 18
ZYM OAS OAS O 0 1 N N N 26.805 -13.715 9.167 4.658 0.227 1.393 OAS ZYM 19
ZYM CAT CAT C 0 1 N N N 23.638 -4.807 6.963 -7.862 0.568 0.688 CAT ZYM 20
ZYM CAU CAU C 0 1 N N N 25.832 -7.600 5.918 -4.174 0.029 -0.333 CAU ZYM 21
ZYM CAV CAV C 0 1 N N N 24.532 -5.734 6.305 -6.578 0.475 -0.064 CAV ZYM 22
ZYM CAW CAW C 0 1 Y N N 28.755 -11.009 7.833 1.873 -1.232 -0.438 CAW ZYM 23
ZYM CAX CAX C 0 1 Y N N 26.322 -14.422 10.223 5.653 0.773 0.646 CAX ZYM 24
ZYM CAY CAY C 0 1 Y N N 27.515 -12.566 9.140 3.852 -0.696 0.805 CAY ZYM 25
ZYM HOAA HOAA H 0 0 N N N 22.534 -4.265 8.278 -9.793 1.003 0.586 HOAA ZYM 26
ZYM HAE HAE H 0 1 N N N 24.160 -7.559 6.962 -5.462 -0.964 1.048 HAE ZYM 27
ZYM HAEA HAEA H 0 0 N N N 25.608 -6.694 7.654 -5.102 0.731 1.456 HAEA ZYM 28
ZYM HAF HAF H 0 1 N N N 24.771 -16.516 13.051 8.468 2.321 -1.470 HAF ZYM 29
ZYM HAG HAG H 0 1 N N N 27.200 -16.523 12.686 6.959 0.651 -2.466 HAG ZYM 30
ZYM HAH HAH H 0 1 N N N 23.332 -15.167 11.594 8.184 2.996 0.880 HAH ZYM 31
ZYM HAI HAI H 0 1 N N N 28.635 -10.033 11.036 3.615 -4.026 0.301 HAI ZYM 32
ZYM HAJ HAJ H 0 1 N N N 29.515 -9.324 8.871 1.566 -3.306 -0.855 HAJ ZYM 33
ZYM HAK HAK H 0 1 N N N 28.194 -15.159 10.912 5.156 -0.342 -1.115 HAK ZYM 34
ZYM HAL HAL H 0 1 N N N 24.327 -13.880 9.771 6.384 2.008 2.237 HAL ZYM 35
ZYM HAM HAM H 0 1 N N N 27.315 -12.094 11.221 5.079 -2.359 1.368 HAM ZYM 36
ZYM HAN HAN H 0 1 N N N 27.850 -12.760 7.036 2.432 0.755 0.116 HAN ZYM 37
ZYM HAO HAO H 0 1 N N N 29.223 -8.823 5.266 -0.330 -0.092 0.659 HAO ZYM 38
ZYM HAOA HAOA H 0 0 N N N 28.464 -8.622 6.899 -0.690 -1.787 0.252 HAOA ZYM 39
ZYM HAP HAP H 0 1 N N N 27.190 -9.293 4.381 -1.685 0.661 -1.276 HAP ZYM 40
ZYM HAPA HAPA H 0 0 N N N 26.982 -10.651 5.498 -2.046 -1.034 -1.683 HAPA ZYM 41
ZYM HAQ HAQ H 0 1 N N N 29.220 -11.341 5.784 0.396 -1.488 -1.957 HAQ ZYM 42
ZYM HAQA HAQA H 0 0 N N N 30.394 -10.305 6.673 0.757 0.207 -1.550 HAQA ZYM 43
ZYM HNAR HNAR H 0 0 N N N 26.093 -9.136 7.156 -2.794 -0.586 1.003 HNAR ZYM 44
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZYM CAT OAA SING N N 1
ZYM OAA HOAA SING N N 2
ZYM OAB CAU DOUB N N 3
ZYM OAC CAT DOUB N N 4
ZYM OAD CAV DOUB N N 5
ZYM CAU CAE SING N N 6
ZYM CAV CAE SING N N 7
ZYM CAE HAE SING N N 8
ZYM CAE HAEA SING N N 9
ZYM CAH CAF DOUB Y N 10
ZYM CAG CAF SING Y N 11
ZYM CAF HAF SING N N 12
ZYM CAK CAG DOUB Y N 13
ZYM CAG HAG SING N N 14
ZYM CAL CAH SING Y N 15
ZYM CAH HAH SING N N 16
ZYM CAJ CAI DOUB Y N 17
ZYM CAI CAM SING Y N 18
ZYM CAI HAI SING N N 19
ZYM CAW CAJ SING Y N 20
ZYM CAJ HAJ SING N N 21
ZYM CAX CAK SING Y N 22
ZYM CAK HAK SING N N 23
ZYM CAX CAL DOUB Y N 24
ZYM CAL HAL SING N N 25
ZYM CAY CAM DOUB Y N 26
ZYM CAM HAM SING N N 27
ZYM CAW CAN DOUB Y N 28
ZYM CAN CAY SING Y N 29
ZYM CAN HAN SING N N 30
ZYM CAP CAO SING N N 31
ZYM CAO CAQ SING N N 32
ZYM CAO HAO SING N N 33
ZYM CAO HAOA SING N N 34
ZYM CAP NAR SING N N 35
ZYM CAP HAP SING N N 36
ZYM CAP HAPA SING N N 37
ZYM CAQ CAW SING N N 38
ZYM CAQ HAQ SING N N 39
ZYM CAQ HAQA SING N N 40
ZYM CAU NAR SING N N 41
ZYM NAR HNAR SING N N 42
ZYM CAY OAS SING N N 43
ZYM OAS CAX SING N N 44
ZYM CAV CAT SING N N 45
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZYM SMILES ACDLabs 12.01 "O=C(O)C(=O)CC(=O)NCCCc2cc(Oc1ccccc1)ccc2"
ZYM SMILES_CANONICAL CACTVS 3.370 "OC(=O)C(=O)CC(=O)NCCCc1cccc(Oc2ccccc2)c1"
ZYM SMILES CACTVS 3.370 "OC(=O)C(=O)CC(=O)NCCCc1cccc(Oc2ccccc2)c1"
ZYM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)Oc2cccc(c2)CCCNC(=O)CC(=O)C(=O)O"
ZYM SMILES "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)Oc2cccc(c2)CCCNC(=O)CC(=O)C(=O)O"
ZYM InChI InChI 1.03 "InChI=1S/C19H19NO5/c21-17(19(23)24)13-18(22)20-11-5-7-14-6-4-10-16(12-14)25-15-8-2-1-3-9-15/h1-4,6,8-10,12H,5,7,11,13H2,(H,20,22)(H,23,24)"
ZYM InChIKey InChI 1.03 SJGQLSMZNBWNEL-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZYM "SYSTEMATIC NAME" ACDLabs 12.01 "2,4-dioxo-4-{[3-(3-phenoxyphenyl)propyl]amino}butanoic acid"
ZYM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2,4-dioxo-4-[3-(3-phenoxyphenyl)propylamino]butanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZYM "Create component" 2010-10-21 RCSB
ZYM "Modify aromatic_flag" 2011-06-04 RCSB
ZYM "Modify descriptor" 2011-06-04 RCSB
#