data_ZYR # _chem_comp.id ZYR _chem_comp.name "5,6,7,8-TETRAHYDRO[1]BENZOTHIENO[2,3-D]PYRIMIDIN-4(3H)-ONE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H10 N2 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-07-03 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 206.264 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ZYR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WMR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ZYR OAA OAA O 0 1 N N N 13.001 0.190 6.113 -1.355 -2.463 0.049 OAA ZYR 1 ZYR CAL CAL C 0 1 N N N 12.062 -0.306 6.729 -1.681 -1.288 0.029 CAL ZYR 2 ZYR CAN CAN C 0 1 Y N N 12.251 -1.427 7.523 -0.692 -0.256 0.008 CAN ZYR 3 ZYR CAK CAK C 0 1 Y N N 13.430 -2.130 7.820 0.760 -0.372 0.005 CAK ZYR 4 ZYR CAF CAF C 0 1 N N N 14.802 -1.961 7.226 1.481 -1.713 0.026 CAF ZYR 5 ZYR CAD CAD C 0 1 N N N 16.081 -2.524 7.916 2.931 -1.502 -0.413 CAD ZYR 6 ZYR CAC CAC C 0 1 N N N 15.759 -4.017 8.006 3.542 -0.362 0.409 CAC ZYR 7 ZYR CAE CAE C 0 1 N N N 14.506 -4.016 8.927 2.905 0.960 -0.025 CAE ZYR 8 ZYR CAJ CAJ C 0 1 Y N N 13.259 -3.260 8.566 1.395 0.803 -0.016 CAJ ZYR 9 ZYR SAI SAI S 0 1 Y N N 11.673 -3.276 9.063 0.258 2.141 -0.035 SAI ZYR 10 ZYR CAM CAM C 0 1 Y N N 11.142 -1.942 8.199 -1.127 1.061 -0.013 CAM ZYR 11 ZYR NAG NAG N 0 1 N N N 9.933 -1.378 8.091 -2.453 1.326 -0.014 NAG ZYR 12 ZYR CAB CAB C 0 1 N N N 9.738 -0.314 7.343 -3.338 0.374 0.006 CAB ZYR 13 ZYR NAH NAH N 0 1 N N N 10.795 0.257 6.637 -2.982 -0.936 0.022 NAH ZYR 14 ZYR HAH HAH H 0 1 N N N 10.643 1.066 6.069 -3.668 -1.622 0.032 HAH ZYR 15 ZYR HAF1 HAF1 H 0 0 N N N 14.758 -2.454 6.244 1.461 -2.123 1.036 HAF1 ZYR 16 ZYR HAF2 HAF2 H 0 0 N N N 14.956 -0.874 7.291 0.989 -2.403 -0.660 HAF2 ZYR 17 ZYR HAD1 HAD1 H 0 0 N N N 16.989 -2.332 7.325 3.499 -2.417 -0.246 HAD1 ZYR 18 ZYR HAD2 HAD2 H 0 0 N N N 16.299 -2.060 8.889 2.957 -1.242 -1.471 HAD2 ZYR 19 ZYR HAC1 HAC1 H 0 0 N N N 15.548 -4.456 7.020 3.347 -0.531 1.468 HAC1 ZYR 20 ZYR HAC2 HAC2 H 0 0 N N N 16.590 -4.627 8.390 4.617 -0.324 0.236 HAC2 ZYR 21 ZYR HAE1 HAE1 H 0 0 N N N 14.199 -5.069 9.009 3.194 1.750 0.669 HAE1 ZYR 22 ZYR HAE2 HAE2 H 0 0 N N N 14.863 -3.481 9.819 3.241 1.215 -1.031 HAE2 ZYR 23 ZYR HAB HAB H 0 1 N N N 8.752 0.120 7.275 -4.386 0.633 0.004 HAB ZYR 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ZYR OAA CAL DOUB N N 1 ZYR CAL CAN SING N N 2 ZYR CAL NAH SING N N 3 ZYR CAN CAK SING Y N 4 ZYR CAN CAM DOUB Y N 5 ZYR CAK CAF SING N N 6 ZYR CAK CAJ DOUB Y N 7 ZYR CAF CAD SING N N 8 ZYR CAD CAC SING N N 9 ZYR CAC CAE SING N N 10 ZYR CAE CAJ SING N N 11 ZYR CAJ SAI SING Y N 12 ZYR SAI CAM SING Y N 13 ZYR CAM NAG SING N N 14 ZYR NAG CAB DOUB N N 15 ZYR CAB NAH SING N N 16 ZYR NAH HAH SING N N 17 ZYR CAF HAF1 SING N N 18 ZYR CAF HAF2 SING N N 19 ZYR CAD HAD1 SING N N 20 ZYR CAD HAD2 SING N N 21 ZYR CAC HAC1 SING N N 22 ZYR CAC HAC2 SING N N 23 ZYR CAE HAE1 SING N N 24 ZYR CAE HAE2 SING N N 25 ZYR CAB HAB SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ZYR SMILES ACDLabs 10.04 "O=C1c2c3c(sc2N=CN1)CCCC3" ZYR SMILES_CANONICAL CACTVS 3.352 O=C1NC=Nc2sc3CCCCc3c12 ZYR SMILES CACTVS 3.352 O=C1NC=Nc2sc3CCCCc3c12 ZYR SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C1CCc2c(c3c(s2)N=CNC3=O)C1" ZYR SMILES "OpenEye OEToolkits" 1.6.1 "C1CCc2c(c3c(s2)N=CNC3=O)C1" ZYR InChI InChI 1.03 "InChI=1S/C10H10N2OS/c13-9-8-6-3-1-2-4-7(6)14-10(8)12-5-11-9/h5H,1-4H2,(H,11,12,13)" ZYR InChIKey InChI 1.03 NMMOEJUJKIXUQZ-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ZYR "SYSTEMATIC NAME" ACDLabs 10.04 "5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one" ZYR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "5,6,7,8-tetrahydro-3H-[1]benzothiolo[3,2-e]pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ZYR "Create component" 2009-07-03 EBI ZYR "Modify aromatic_flag" 2011-06-04 RCSB ZYR "Modify descriptor" 2011-06-04 RCSB #