data_M70
# 
_chem_comp.id                                    M70 
_chem_comp.name                                  "(2S)-2-azanyl-3-(1-carbamimidoylpiperidin-4-yl)propanoic acid" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H18 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-01-24 
_chem_comp.pdbx_modified_date                    2025-08-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        214.265 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M70 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9VWT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M70 O   O1  O 0 1 N N N N Y Y -35.148 18.148 1.120  4.752  -0.440 0.010  O   M70 1  
M70 C   C1  C 0 1 N N N N Y Y -34.518 18.608 0.169  3.863  0.317  0.319  C   M70 2  
M70 CA  C2  C 0 1 N N S N Y N -35.065 18.412 -1.219 2.530  0.240  -0.380 CA  M70 3  
M70 N   N1  N 0 1 N N N Y Y N -34.190 18.963 -2.240 2.691  -0.456 -1.664 N   M70 4  
M70 CB  C3  C 0 1 N N N N N N -35.212 16.911 -1.379 1.539  -0.529 0.496  CB  M70 5  
M70 C6  C4  C 0 1 N N N N N N -36.344 16.783 -2.873 0.167  -0.545 -0.181 C6  M70 6  
M70 C7  C5  C 0 1 N N N N N N -37.651 17.534 -2.809 -0.392 0.878  -0.235 C7  M70 7  
M70 C8  C6  C 0 1 N N N N N N -38.353 17.325 -4.125 -1.750 0.863  -0.944 C8  M70 8  
M70 N9  N2  N 0 1 N N N N N N -38.530 15.891 -4.447 -2.626 -0.104 -0.267 N9  M70 9  
M70 C12 C7  C 0 1 N N N N N N -39.593 15.471 -5.137 -3.869 0.272  0.183  C12 M70 10 
M70 N14 N3  N 0 1 N N N N N N -40.601 16.321 -5.426 -4.352 1.528  -0.101 N14 M70 11 
M70 N13 N4  N 0 1 N N N N N N -39.584 14.228 -5.591 -4.591 -0.562 0.878  N13 M70 12 
M70 C10 C8  C 0 1 N N N N N N -37.376 15.001 -4.209 -2.147 -1.481 -0.081 C10 M70 13 
M70 C11 C9  C 0 1 N N N N N N -36.619 15.289 -2.938 -0.785 -1.439 0.618  C11 M70 14 
M70 OXT O2  O 0 1 N Y N N Y Y -33.315 19.177 0.271  4.061  1.224  1.289  OXT M70 15 
M70 HA  H1  H 0 1 N N N N Y N -36.059 18.879 -1.285 2.154  1.247  -0.557 HA  M70 16 
M70 H2  H2  H 0 1 N Y N Y Y N -34.110 19.952 -2.113 3.291  0.066  -2.285 H2  M70 17 
M70 H   H3  H 0 1 N N N Y Y N -33.286 18.543 -2.166 3.039  -1.393 -1.527 H   M70 18 
M70 HB1 H5  H 0 1 N N N N N N -35.673 16.458 -0.489 1.890  -1.552 0.630  HB1 M70 19 
M70 HB2 H6  H 0 1 N N N N N N -34.240 16.433 -1.572 1.459  -0.042 1.467  HB2 M70 20 
M70 H7  H7  H 0 1 N N N N N N -35.752 17.105 -3.742 0.266  -0.935 -1.194 H7  M70 21 
M70 H8  H8  H 0 1 N N N N N N -37.462 18.606 -2.649 -0.515 1.259  0.779  H8  M70 22 
M70 H9  H9  H 0 1 N N N N N N -38.269 17.144 -1.987 0.298  1.519  -0.783 H9  M70 23 
M70 H10 H10 H 0 1 N N N N N N -37.758 17.795 -4.922 -2.198 1.856  -0.897 H10 M70 24 
M70 H11 H11 H 0 1 N N N N N N -39.343 17.801 -4.077 -1.615 0.571  -1.985 H11 M70 25 
M70 H12 H12 H 0 1 N N N N N N -40.555 17.273 -5.123 -3.788 2.173  -0.557 H12 M70 26 
M70 H13 H13 H 0 1 N N N N N N -41.394 15.999 -5.943 -5.255 1.770  0.156  H13 M70 27 
M70 H14 H14 H 0 1 N N N N N N -38.743 13.746 -5.346 -4.219 -1.416 1.148  H14 M70 28 
M70 H15 H15 H 0 1 N N N N N N -37.744 13.965 -4.163 -2.857 -2.034 0.534  H15 M70 29 
M70 H16 H16 H 0 1 N N N N N N -36.681 15.106 -5.055 -2.045 -1.966 -1.052 H16 M70 30 
M70 H17 H17 H 0 1 N N N N N N -37.221 14.984 -2.069 -0.375 -2.447 0.676  H17 M70 31 
M70 H18 H18 H 0 1 N N N N N N -35.668 14.736 -2.938 -0.904 -1.036 1.623  H18 M70 32 
M70 HXT H19 H 0 1 N Y N N Y Y -33.035 19.167 1.179  4.930  1.233  1.711  HXT M70 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M70 N13 C12 DOUB N N 1  
M70 N14 C12 SING N N 2  
M70 C12 N9  SING N N 3  
M70 N9  C10 SING N N 4  
M70 N9  C8  SING N N 5  
M70 C10 C11 SING N N 6  
M70 C8  C7  SING N N 7  
M70 C11 C6  SING N N 8  
M70 C6  C7  SING N N 9  
M70 C6  CB  SING N N 10 
M70 N   CA  SING N N 11 
M70 CB  CA  SING N N 12 
M70 CA  C   SING N N 13 
M70 C   O   DOUB N N 14 
M70 C   OXT SING N N 15 
M70 CA  HA  SING N N 16 
M70 N   H2  SING N N 17 
M70 N   H   SING N N 18 
M70 CB  HB1 SING N N 19 
M70 CB  HB2 SING N N 20 
M70 C6  H7  SING N N 21 
M70 C7  H8  SING N N 22 
M70 C7  H9  SING N N 23 
M70 C8  H10 SING N N 24 
M70 C8  H11 SING N N 25 
M70 N14 H12 SING N N 26 
M70 N14 H13 SING N N 27 
M70 N13 H14 SING N N 28 
M70 C10 H15 SING N N 29 
M70 C10 H16 SING N N 30 
M70 C11 H17 SING N N 31 
M70 C11 H18 SING N N 32 
M70 OXT HXT SING N N 33 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M70 InChI            InChI                1.06  "InChI=1S/C9H18N4O2/c10-7(8(14)15)5-6-1-3-13(4-2-6)9(11)12/h6-7H,1-5,10H2,(H3,11,12)(H,14,15)/t7-/m0/s1" 
M70 InChIKey         InChI                1.06  CCTXTGQVXGVJLD-ZETCQYMHSA-N                                                                              
M70 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CC1CCN(CC1)C(N)=N)C(O)=O"                                                                       
M70 SMILES           CACTVS               3.385 "N[CH](CC1CCN(CC1)C(N)=N)C(O)=O"                                                                         
M70 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\N1CCC(CC1)C[C@@H](C(=O)O)N"                                                                 
M70 SMILES           "OpenEye OEToolkits" 2.0.7 "C1CN(CCC1CC(C(=O)O)N)C(=N)N"                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           M70 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-azanyl-3-(1-carbamimidoylpiperidin-4-yl)propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M70 "Create component"              2017-01-24 PDBJ 
M70 "Modify backbone"               2023-11-03 PDBE 
M70 "Modify PCM"                    2024-09-27 PDBE 
M70 "Modify model coordinates code" 2025-07-31 PDBC 
M70 "Initial release"               2025-08-06 RCSB 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            M70 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
