data_A1IO2
# 
_chem_comp.id                                    A1IO2 
_chem_comp.name                                  "(2~{S})-3-(1~{H}-indol-3-yl)-2-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H15 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-09-19 
_chem_comp.pdbx_modified_date                    2025-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        321.333 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1IO2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9GUB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1IO2 C1  C1  C 0 1 N N N N N N 4.935 -17.744 41.337 -0.726 -3.155 0.727  C1  A1IO2 1  
A1IO2 C2  C2  C 0 1 N N S N N N 4.619 -16.610 42.320 0.072  -2.040 0.103  C2  A1IO2 2  
A1IO2 C3  C3  C 0 1 N N N N N N 3.299 -16.969 43.026 1.526  -2.132 0.568  C3  A1IO2 3  
A1IO2 C4  C4  C 0 1 Y N N N N N 2.931 -15.962 44.067 2.350  -1.093 -0.150 C4  A1IO2 4  
A1IO2 C5  C5  C 0 1 Y N N N N N 2.190 -14.828 43.917 3.068  -1.278 -1.269 C5  A1IO2 5  
A1IO2 C6  C6  C 0 1 Y N N N N N 2.816 -14.814 46.062 3.365  0.882  -0.725 C6  A1IO2 6  
A1IO2 O1  O1  O 0 1 N N N N N N 4.615 -17.582 40.164 -1.671 -2.899 1.436  O1  A1IO2 7  
A1IO2 O2  O2  O 0 1 N N N N N N 5.453 -18.775 41.807 -0.391 -4.433 0.492  O2  A1IO2 8  
A1IO2 N1  N1  N 0 1 Y N N N N N 2.113 -14.137 45.098 3.682  -0.108 -1.627 N1  A1IO2 9  
A1IO2 C7  C7  C 0 1 Y N N N N N 3.037 -14.508 47.412 3.707  2.226  -0.619 C7  A1IO2 10 
A1IO2 C8  C8  C 0 1 Y N N N N N 3.782 -15.404 48.143 3.209  2.979  0.422  C8  A1IO2 11 
A1IO2 C9  C9  C 0 1 Y N N N N N 4.326 -16.551 47.558 2.369  2.410  1.369  C9  A1IO2 12 
A1IO2 C10 C10 C 0 1 Y N N N N N 4.119 -16.847 46.230 2.021  1.091  1.285  C10 A1IO2 13 
A1IO2 C11 C11 C 0 1 Y N N N N N 3.356 -15.968 45.440 2.513  0.310  0.237  C11 A1IO2 14 
A1IO2 N2  N2  N 0 1 N N N N N N 4.486 -15.311 41.703 -0.490 -0.750 0.511  N2  A1IO2 15 
A1IO2 C12 C12 C 0 1 Y N N N N N 5.477 -14.562 41.193 -1.551 -0.205 -0.191 C12 A1IO2 16 
A1IO2 N3  N3  N 0 1 Y N N N N N 5.113 -13.365 40.690 -2.073 -0.837 -1.237 N3  A1IO2 17 
A1IO2 C13 C13 C 0 1 Y N N N N N 6.052 -12.574 40.167 -3.086 -0.321 -1.909 C13 A1IO2 18 
A1IO2 N4  N4  N 0 1 Y N N N N N 7.358 -12.801 40.060 -3.635 0.832  -1.594 N4  A1IO2 19 
A1IO2 C14 C14 C 0 1 Y N N N N N 7.722 -13.978 40.574 -3.181 1.541  -0.561 C14 A1IO2 20 
A1IO2 N5  N5  N 0 1 Y N N N N N 8.985 -14.475 40.587 -3.529 2.738  0.002  N5  A1IO2 21 
A1IO2 C15 C15 C 0 1 Y N N N N N 8.948 -15.698 41.218 -2.716 3.007  1.073  C15 A1IO2 22 
A1IO2 C16 C16 C 0 1 Y N N N N N 7.673 -16.018 41.574 -1.832 2.009  1.235  C16 A1IO2 23 
A1IO2 C17 C17 C 0 1 Y N N N N N 6.851 -14.914 41.176 -2.107 1.027  0.188  C17 A1IO2 24 
A1IO2 H1  H1  H 0 1 N N N N N N 5.416 -16.577 43.077 0.031  -2.127 -0.983 H1  A1IO2 25 
A1IO2 H3  H2  H 0 1 N N N N N N 2.496 -17.015 42.276 1.577  -1.956 1.642  H3  A1IO2 26 
A1IO2 H2  H3  H 0 1 N N N N N N 3.409 -17.953 43.506 1.918  -3.124 0.344  H2  A1IO2 27 
A1IO2 H4  H4  H 0 1 N N N N N N 1.726 -14.516 42.993 3.150  -2.211 -1.806 H4  A1IO2 28 
A1IO2 H15 H5  H 0 1 N N N N N N 5.563 -19.418 41.116 -0.933 -5.114 0.914  H15 A1IO2 29 
A1IO2 H5  H6  H 0 1 N N N N N N 1.623 -13.276 45.235 4.255  0.006  -2.401 H5  A1IO2 30 
A1IO2 H6  H7  H 0 1 N N N N N N 2.640 -13.608 47.859 4.361  2.678  -1.350 H6  A1IO2 31 
A1IO2 H7  H8  H 0 1 N N N N N N 3.950 -15.217 49.193 3.476  4.023  0.503  H7  A1IO2 32 
A1IO2 H8  H9  H 0 1 N N N N N N 4.922 -17.220 48.161 1.987  3.014  2.179  H8  A1IO2 33 
A1IO2 H9  H10 H 0 1 N N N N N N 4.538 -17.744 45.799 1.367  0.655  2.025  H9  A1IO2 34 
A1IO2 H10 H11 H 0 1 N N N N N N 3.848 -15.448 40.945 -0.119 -0.278 1.272  H10 A1IO2 35 
A1IO2 H11 H12 H 0 1 N N N N N N 5.706 -11.627 39.780 -3.480 -0.867 -2.753 H11 A1IO2 36 
A1IO2 H12 H13 H 0 1 N N N N N N 9.797 -14.032 40.206 -4.245 3.313  -0.310 H12 A1IO2 37 
A1IO2 H13 H14 H 0 1 N N N N N N 9.812 -16.319 41.405 -2.777 3.889  1.694  H13 A1IO2 38 
A1IO2 H14 H15 H 0 1 N N N N N N 7.346 -16.925 42.060 -1.067 1.944  1.994  H14 A1IO2 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1IO2 O1  C1  DOUB N N 1  
A1IO2 C1  O2  SING N N 2  
A1IO2 C1  C2  SING N N 3  
A1IO2 C2  C3  SING N N 4  
A1IO2 C3  C4  SING N N 5  
A1IO2 C4  C5  DOUB Y N 6  
A1IO2 C5  N1  SING Y N 7  
A1IO2 N1  C6  SING Y N 8  
A1IO2 C6  C7  DOUB Y N 9  
A1IO2 C7  C8  SING Y N 10 
A1IO2 C8  C9  DOUB Y N 11 
A1IO2 C9  C10 SING Y N 12 
A1IO2 C10 C11 DOUB Y N 13 
A1IO2 C2  N2  SING N N 14 
A1IO2 N2  C12 SING N N 15 
A1IO2 C12 N3  DOUB Y N 16 
A1IO2 N3  C13 SING Y N 17 
A1IO2 C13 N4  DOUB Y N 18 
A1IO2 N4  C14 SING Y N 19 
A1IO2 C14 N5  SING Y N 20 
A1IO2 N5  C15 SING Y N 21 
A1IO2 C15 C16 DOUB Y N 22 
A1IO2 C16 C17 SING Y N 23 
A1IO2 C4  C11 SING Y N 24 
A1IO2 C12 C17 SING Y N 25 
A1IO2 C6  C11 SING Y N 26 
A1IO2 C14 C17 DOUB Y N 27 
A1IO2 C2  H1  SING N N 28 
A1IO2 C3  H3  SING N N 29 
A1IO2 C3  H2  SING N N 30 
A1IO2 C5  H4  SING N N 31 
A1IO2 O2  H15 SING N N 32 
A1IO2 N1  H5  SING N N 33 
A1IO2 C7  H6  SING N N 34 
A1IO2 C8  H7  SING N N 35 
A1IO2 C9  H8  SING N N 36 
A1IO2 C10 H9  SING N N 37 
A1IO2 N2  H10 SING N N 38 
A1IO2 C13 H11 SING N N 39 
A1IO2 N5  H12 SING N N 40 
A1IO2 C15 H13 SING N N 41 
A1IO2 C16 H14 SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1IO2 InChI            InChI                1.06  "InChI=1S/C17H15N5O2/c23-17(24)14(7-10-8-19-13-4-2-1-3-11(10)13)22-16-12-5-6-18-15(12)20-9-21-16/h1-6,8-9,14,19H,7H2,(H,23,24)(H2,18,20,21,22)/t14-/m1/s1" 
A1IO2 InChIKey         InChI                1.06  NOYXATOHIUTWQW-CQSZACIVSA-N                                                                                                                                
A1IO2 SMILES_CANONICAL CACTVS               3.385 "OC(=O)[C@H](Cc1c[nH]c2ccccc12)Nc3ncnc4[nH]ccc34"                                                                                                          
A1IO2 SMILES           CACTVS               3.385 "OC(=O)[CH](Cc1c[nH]c2ccccc12)Nc3ncnc4[nH]ccc34"                                                                                                           
A1IO2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)C[C@@H](C(=O)O)Nc3c4cc[nH]c4ncn3"                                                                                                     
A1IO2 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)c(c[nH]2)CC(C(=O)O)Nc3c4cc[nH]c4ncn3"                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           A1IO2 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-3-(1~{H}-indol-3-yl)-2-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1IO2 "Create component" 2024-09-19 PDBE 
A1IO2 "Initial release"  2025-06-11 RCSB 
# 
