data_A1B13
# 
_chem_comp.id                                    A1B13 
_chem_comp.name                                  "(3S)-1-[(2S)-2-(thiophen-2-yl)propanoyl]piperidine-3-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H18 N2 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2025-03-21 
_chem_comp.pdbx_modified_date                    2025-03-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        266.359 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1B13 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7I3N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1B13 N1  N1  N 0 1 N N N N N N 11.031 13.609 17.880 5.177  -1.075 1.112  N1  A1B13 1  
A1B13 C4  C1  C 0 1 N N N N N N 12.179 14.047 22.472 2.141  2.120  0.806  C4  A1B13 2  
A1B13 C5  C2  C 0 1 N N N N N N 12.143 14.531 21.022 3.373  1.253  0.538  C5  A1B13 3  
A1B13 C6  C3  C 0 1 N N S N N N 10.940 13.958 20.262 2.956  -0.216 0.444  C6  A1B13 4  
A1B13 C7  C4  C 0 1 N N N N N N 10.889 14.500 18.845 4.174  -1.071 0.212  C7  A1B13 5  
A1B13 C8  C5  C 0 1 N N N N N N 9.654  14.269 21.033 1.978  -0.391 -0.722 C8  A1B13 6  
A1B13 C10 C6  C 0 1 Y N N N N N 8.604  9.823  24.882 -3.296 0.457  1.453  C10 A1B13 7  
A1B13 O1  O1  O 0 1 N N N N N N 10.727 15.703 18.630 4.253  -1.757 -0.786 O1  A1B13 8  
A1B13 C3  C7  C 0 1 N N N N N N 10.859 14.343 23.159 1.154  1.971  -0.356 C3  A1B13 9  
A1B13 N   N2  N 0 1 N N N N N N 9.747  13.749 22.400 0.859  0.544  -0.545 N   A1B13 10 
A1B13 C2  C8  C 0 1 N N N N N N 8.874  12.826 22.864 -0.414 0.102  -0.558 C2  A1B13 11 
A1B13 O   O2  O 0 1 N N N N N N 7.959  12.415 22.172 -0.650 -1.061 -0.806 O   A1B13 12 
A1B13 C1  C9  C 0 1 N N R N N N 9.049  12.332 24.288 -1.546 1.054  -0.263 C1  A1B13 13 
A1B13 C   C10 C 0 1 N N N N N N 7.796  12.651 25.103 -1.941 1.788  -1.546 C   A1B13 14 
A1B13 C9  C11 C 0 1 Y N N N N N 9.328  10.848 24.254 -2.729 0.281  0.259  C9  A1B13 15 
A1B13 S   S1  S 0 1 Y N N N N N 10.655 10.197 23.383 -3.574 -0.992 -0.613 S   A1B13 16 
A1B13 C12 C12 C 0 1 Y N N N N N 10.275 8.603  23.832 -4.682 -1.220 0.733  C12 A1B13 17 
A1B13 C11 C13 C 0 1 Y N N N N N 9.186  8.536  24.614 -4.374 -0.372 1.715  C11 A1B13 18 
A1B13 H12 H1  H 0 1 N N N N N N 11.010 13.900 16.924 5.114  -0.527 1.910  H12 A1B13 19 
A1B13 H11 H2  H 0 1 N N N N N N 11.160 12.643 18.106 5.959  -1.629 0.965  H11 A1B13 20 
A1B13 H7  H3  H 0 1 N N N N N N 12.990 14.563 23.007 1.664  1.798  1.732  H7  A1B13 21 
A1B13 H8  H4  H 0 1 N N N N N N 12.361 12.962 22.488 2.443  3.164  0.897  H8  A1B13 22 
A1B13 H9  H5  H 0 1 N N N N N N 12.079 15.629 21.014 3.835  1.560  -0.401 H9  A1B13 23 
A1B13 H10 H6  H 0 1 N N N N N N 13.067 14.214 20.517 4.088  1.377  1.351  H10 A1B13 24 
A1B13 H1  H7  H 0 1 N N N N N N 11.055 12.865 20.211 2.472  -0.516 1.373  H1  A1B13 25 
A1B13 H13 H8  H 0 1 N N N N N N 9.505  15.358 21.068 2.487  -0.178 -1.662 H13 A1B13 26 
A1B13 H14 H9  H 0 1 N N N N N N 8.801  13.798 20.522 1.603  -1.415 -0.734 H14 A1B13 27 
A1B13 H15 H10 H 0 1 N N N N N N 7.724  9.980  25.488 -2.939 1.187  2.164  H15 A1B13 28 
A1B13 H6  H11 H 0 1 N N N N N N 10.717 15.432 23.219 0.233  2.507  -0.124 H6  A1B13 29 
A1B13 H5  H12 H 0 1 N N N N N N 10.874 13.918 24.174 1.595  2.379  -1.265 H5  A1B13 30 
A1B13 H   H13 H 0 1 N N N N N N 9.908  12.848 24.742 -1.225 1.778  0.486  H   A1B13 31 
A1B13 H2  H14 H 0 1 N N N N N N 7.927  12.291 26.134 -1.080 2.332  -1.934 H2  A1B13 32 
A1B13 H3  H15 H 0 1 N N N N N N 7.632  13.739 25.112 -2.280 1.065  -2.289 H3  A1B13 33 
A1B13 H4  H16 H 0 1 N N N N N N 6.927  12.153 24.649 -2.747 2.490  -1.329 H4  A1B13 34 
A1B13 H17 H17 H 0 1 N N N N N N 10.846 7.740  23.523 -5.489 -1.938 0.761  H17 A1B13 35 
A1B13 H16 H18 H 0 1 N N N N N N 8.788  7.610  25.002 -4.921 -0.337 2.645  H16 A1B13 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1B13 C   C1  SING N N 1  
A1B13 C1  C2  SING N N 2  
A1B13 O   C2  DOUB N N 3  
A1B13 C2  N   SING N N 4  
A1B13 N   C3  SING N N 5  
A1B13 C3  C4  SING N N 6  
A1B13 C4  C5  SING N N 7  
A1B13 C5  C6  SING N N 8  
A1B13 C6  C7  SING N N 9  
A1B13 N1  C7  SING N N 10 
A1B13 C7  O1  DOUB N N 11 
A1B13 C8  C6  SING N N 12 
A1B13 N   C8  SING N N 13 
A1B13 C9  C1  SING N N 14 
A1B13 C9  C10 DOUB Y N 15 
A1B13 C10 C11 SING Y N 16 
A1B13 C11 C12 DOUB Y N 17 
A1B13 C12 S   SING Y N 18 
A1B13 S   C9  SING Y N 19 
A1B13 N1  H12 SING N N 20 
A1B13 N1  H11 SING N N 21 
A1B13 C4  H7  SING N N 22 
A1B13 C4  H8  SING N N 23 
A1B13 C5  H9  SING N N 24 
A1B13 C5  H10 SING N N 25 
A1B13 C6  H1  SING N N 26 
A1B13 C8  H13 SING N N 27 
A1B13 C8  H14 SING N N 28 
A1B13 C10 H15 SING N N 29 
A1B13 C3  H6  SING N N 30 
A1B13 C3  H5  SING N N 31 
A1B13 C1  H   SING N N 32 
A1B13 C   H2  SING N N 33 
A1B13 C   H3  SING N N 34 
A1B13 C   H4  SING N N 35 
A1B13 C12 H17 SING N N 36 
A1B13 C11 H16 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1B13 SMILES           ACDLabs              14.52   "O=C(C(C)c1cccs1)N1CCCC(C1)C(N)=O"                                                                                             
A1B13 InChI            InChI                1.06    "InChI=1S/C13H18N2O2S/c1-9(11-5-3-7-18-11)13(17)15-6-2-4-10(8-15)12(14)16/h3,5,7,9-10H,2,4,6,8H2,1H3,(H2,14,16)/t9-,10+/m1/s1" 
A1B13 InChIKey         InChI                1.06    JQNFTWVJWFLFOK-ZJUUUORDSA-N                                                                                                    
A1B13 SMILES_CANONICAL CACTVS               3.385   "C[C@H](C(=O)N1CCC[C@@H](C1)C(N)=O)c2sccc2"                                                                                    
A1B13 SMILES           CACTVS               3.385   "C[CH](C(=O)N1CCC[CH](C1)C(N)=O)c2sccc2"                                                                                       
A1B13 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@@H](c1cccs1)C(=O)N2CCC[C@@H](C2)C(=O)N"                                                                                   
A1B13 SMILES           "OpenEye OEToolkits" 3.1.0.0 "CC(c1cccs1)C(=O)N2CCCC(C2)C(=O)N"                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1B13 "SYSTEMATIC NAME" ACDLabs              14.52   "(3S)-1-[(2S)-2-(thiophen-2-yl)propanoyl]piperidine-3-carboxamide"     
A1B13 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[(2~{R})-2-thiophen-2-ylpropanoyl]piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1B13 "Create component" 2025-03-21 RCSB 
A1B13 "Initial release"  2025-04-02 RCSB 
# 
