data_A1CC3
# 
_chem_comp.id                                    A1CC3 
_chem_comp.name                                  "(2M,4S)-2-(2-chloropyridin-4-yl)-N-cyclohexyl-5,7-dimethylimidazo[1,2-a]pyrimidin-3-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 Cl N5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2025-05-16 
_chem_comp.pdbx_modified_date                    2025-07-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        355.864 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1CC3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9OO1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1CC3 C18 C1  C  0 1 Y N N N N N 168.377 174.950 175.236 -2.914 -2.452 -1.747 C18 A1CC3 1  
A1CC3 C20 C2  C  0 1 Y N N N N N 168.760 173.715 173.338 -3.387 -1.514 0.311  C20 A1CC3 2  
A1CC3 C17 C3  C  0 1 Y N N N N N 167.020 174.684 175.184 -1.569 -2.186 -1.611 C17 A1CC3 3  
A1CC3 C16 C4  C  0 1 Y N N N N N 166.532 173.890 174.157 -1.116 -1.550 -0.448 C16 A1CC3 4  
A1CC3 C15 C5  C  0 1 Y N N N N N 165.180 173.595 174.051 0.319  -1.244 -0.259 C15 A1CC3 5  
A1CC3 C14 C6  C  0 1 N N N N N N 164.389 172.908 178.718 0.329  2.837  0.345  C14 A1CC3 6  
A1CC3 N23 N1  N  0 1 Y N N N N N 164.558 173.291 172.923 1.232  -2.052 0.317  N23 A1CC3 7  
A1CC3 C13 C7  C  0 1 N N N N N N 164.659 171.679 179.580 -0.577 3.615  1.303  C13 A1CC3 8  
A1CC3 C12 C8  C  0 1 N N N N N N 164.161 170.400 178.919 -1.711 4.271  0.512  C12 A1CC3 9  
A1CC3 C11 C9  C  0 1 N N N N N N 164.806 170.221 177.552 -2.528 3.190  -0.199 C11 A1CC3 10 
A1CC3 C10 C10 C  0 1 N N N N N N 164.548 171.431 176.663 -1.622 2.412  -1.156 C10 A1CC3 11 
A1CC3 C01 C11 C  0 1 N N N N N N 159.895 172.168 171.785 5.997  -1.543 1.175  C01 A1CC3 12 
A1CC3 C02 C12 C  0 1 Y N N N N N 161.006 172.549 172.751 4.663  -1.072 0.656  C02 A1CC3 13 
A1CC3 C03 C13 C  0 1 Y N N N N N 160.725 172.710 174.107 4.555  0.192  0.057  C03 A1CC3 14 
A1CC3 C04 C14 C  0 1 Y N N N N N 161.752 173.058 174.977 3.354  0.606  -0.411 C04 A1CC3 15 
A1CC3 C05 C15 C  0 1 N N N N N N 161.412 173.229 176.456 3.211  1.959  -1.059 C05 A1CC3 16 
A1CC3 C07 C16 C  0 1 Y N N N N N 164.207 173.569 175.058 0.959  -0.085 -0.646 C07 A1CC3 17 
A1CC3 C09 C17 C  0 1 N N N N N N 164.949 172.755 177.307 -0.488 1.757  -0.365 C09 A1CC3 18 
A1CC3 C22 C18 C  0 1 Y N N N N N 167.416 173.398 173.212 -2.059 -1.210 0.529  C22 A1CC3 19 
A1CC3 C24 C19 C  0 1 Y N N N N N 163.236 173.067 173.184 2.410  -1.452 0.315  C24 A1CC3 20 
A1CC3 N06 N2  N  0 1 Y N N N N N 163.013 173.230 174.461 2.270  -0.219 -0.282 N06 A1CC3 21 
A1CC3 N08 N3  N  0 1 N N N N N N 164.434 173.834 176.475 0.382  1.010  -1.284 N08 A1CC3 22 
A1CC3 N19 N4  N  0 1 Y N N N N N 169.202 174.468 174.327 -3.772 -2.111 -0.803 N19 A1CC3 23 
A1CC3 N25 N5  N  0 1 Y N N N N N 162.244 172.728 172.319 3.611  -1.847 0.768  N25 A1CC3 24 
A1CC3 CL1 CL1 CL 0 0 N N N N N N 169.923 173.092 172.136 -4.570 -1.093 1.510  CL1 A1CC3 25 
A1CC3 H1  H1  H  0 1 N N N N N N 168.767 175.563 176.035 -3.273 -2.942 -2.640 H1  A1CC3 26 
A1CC3 H2  H2  H  0 1 N N N N N N 166.352 175.088 175.931 -0.874 -2.464 -2.389 H2  A1CC3 27 
A1CC3 H3  H3  H  0 1 N N N N N N 164.857 173.783 179.192 0.749  3.520  -0.393 H3  A1CC3 28 
A1CC3 H4  H4  H  0 1 N N N N N N 163.302 173.064 178.653 1.137  2.370  0.909  H4  A1CC3 29 
A1CC3 H5  H5  H  0 1 N N N N N N 165.743 171.594 179.748 -0.997 2.932  2.041  H5  A1CC3 30 
A1CC3 H6  H6  H  0 1 N N N N N N 164.147 171.803 180.546 0.005  4.385  1.809  H6  A1CC3 31 
A1CC3 H7  H7  H  0 1 N N N N N N 163.069 170.456 178.800 -2.356 4.825  1.194  H7  A1CC3 32 
A1CC3 H8  H8  H  0 1 N N N N N N 164.417 169.540 179.556 -1.291 4.954  -0.227 H8  A1CC3 33 
A1CC3 H9  H9  H  0 1 N N N N N N 164.386 169.325 177.071 -2.948 2.507  0.539  H9  A1CC3 34 
A1CC3 H10 H10 H  0 1 N N N N N N 165.891 170.094 177.680 -3.336 3.657  -0.762 H10 A1CC3 35 
A1CC3 H11 H11 H  0 1 N N N N N N 163.474 171.469 176.429 -2.204 1.643  -1.663 H11 A1CC3 36 
A1CC3 H12 H12 H  0 1 N N N N N N 165.122 171.308 175.733 -1.202 3.095  -1.895 H12 A1CC3 37 
A1CC3 H13 H13 H  0 1 N N N N N N 160.305 172.085 170.768 6.110  -1.240 2.216  H13 A1CC3 38 
A1CC3 H14 H14 H  0 1 N N N N N N 159.463 171.202 172.086 6.051  -2.630 1.104  H14 A1CC3 39 
A1CC3 H15 H15 H  0 1 N N N N N N 159.113 172.941 171.803 6.795  -1.100 0.579  H15 A1CC3 40 
A1CC3 H16 H16 H  0 1 N N N N N N 159.721 172.566 174.477 5.424  0.828  -0.033 H16 A1CC3 41 
A1CC3 H17 H17 H  0 1 N N N N N N 161.533 172.266 176.974 4.179  2.459  -1.073 H17 A1CC3 42 
A1CC3 H18 H18 H  0 1 N N N N N N 162.087 173.974 176.903 2.850  1.837  -2.080 H18 A1CC3 43 
A1CC3 H19 H19 H  0 1 N N N N N N 160.371 173.571 176.556 2.500  2.560  -0.492 H19 A1CC3 44 
A1CC3 H20 H20 H  0 1 N N N N N N 166.047 172.811 177.352 -0.908 1.074  0.373  H20 A1CC3 45 
A1CC3 H21 H21 H  0 1 N N N N N N 167.067 172.782 172.396 -1.751 -0.722 1.442  H21 A1CC3 46 
A1CC3 H22 H22 H  0 1 N N N N N N 165.086 174.590 176.534 1.088  1.611  -1.682 H22 A1CC3 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1CC3 C01 C02 SING N N 1  
A1CC3 CL1 C20 SING N N 2  
A1CC3 N25 C02 DOUB Y N 3  
A1CC3 N25 C24 SING Y N 4  
A1CC3 C02 C03 SING Y N 5  
A1CC3 N23 C24 DOUB Y N 6  
A1CC3 N23 C15 SING Y N 7  
A1CC3 C24 N06 SING Y N 8  
A1CC3 C22 C20 DOUB Y N 9  
A1CC3 C22 C16 SING Y N 10 
A1CC3 C20 N19 SING Y N 11 
A1CC3 C15 C16 SING N N 12 
A1CC3 C15 C07 DOUB Y N 13 
A1CC3 C03 C04 DOUB Y N 14 
A1CC3 C16 C17 DOUB Y N 15 
A1CC3 N19 C18 DOUB Y N 16 
A1CC3 N06 C04 SING Y N 17 
A1CC3 N06 C07 SING Y N 18 
A1CC3 C04 C05 SING N N 19 
A1CC3 C07 N08 SING N N 20 
A1CC3 C17 C18 SING Y N 21 
A1CC3 N08 C09 SING N N 22 
A1CC3 C10 C09 SING N N 23 
A1CC3 C10 C11 SING N N 24 
A1CC3 C09 C14 SING N N 25 
A1CC3 C11 C12 SING N N 26 
A1CC3 C14 C13 SING N N 27 
A1CC3 C12 C13 SING N N 28 
A1CC3 C18 H1  SING N N 29 
A1CC3 C17 H2  SING N N 30 
A1CC3 C14 H3  SING N N 31 
A1CC3 C14 H4  SING N N 32 
A1CC3 C13 H5  SING N N 33 
A1CC3 C13 H6  SING N N 34 
A1CC3 C12 H7  SING N N 35 
A1CC3 C12 H8  SING N N 36 
A1CC3 C11 H9  SING N N 37 
A1CC3 C11 H10 SING N N 38 
A1CC3 C10 H11 SING N N 39 
A1CC3 C10 H12 SING N N 40 
A1CC3 C01 H13 SING N N 41 
A1CC3 C01 H14 SING N N 42 
A1CC3 C01 H15 SING N N 43 
A1CC3 C03 H16 SING N N 44 
A1CC3 C05 H17 SING N N 45 
A1CC3 C05 H18 SING N N 46 
A1CC3 C05 H19 SING N N 47 
A1CC3 C09 H20 SING N N 48 
A1CC3 C22 H21 SING N N 49 
A1CC3 N08 H22 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1CC3 SMILES           ACDLabs              14.52   "Clc1nccc(c1)c1nc2nc(C)cc(C)n2c1NC1CCCCC1"                                                                                    
A1CC3 InChI            InChI                1.06    "InChI=1S/C19H22ClN5/c1-12-10-13(2)25-18(23-15-6-4-3-5-7-15)17(24-19(25)22-12)14-8-9-21-16(20)11-14/h8-11,15,23H,3-7H2,1-2H3" 
A1CC3 InChIKey         InChI                1.06    HERNWKUOCFEFTO-UHFFFAOYSA-N                                                                                                   
A1CC3 SMILES_CANONICAL CACTVS               3.385   "Cc1cc(C)n2c(NC3CCCCC3)c(nc2n1)c4ccnc(Cl)c4"                                                                                  
A1CC3 SMILES           CACTVS               3.385   "Cc1cc(C)n2c(NC3CCCCC3)c(nc2n1)c4ccnc(Cl)c4"                                                                                  
A1CC3 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(n2c(c(nc2n1)c3ccnc(c3)Cl)NC4CCCCC4)C"                                                                                  
A1CC3 SMILES           "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(n2c(c(nc2n1)c3ccnc(c3)Cl)NC4CCCCC4)C"                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1CC3 "SYSTEMATIC NAME" ACDLabs              14.52   "(2M,4S)-2-(2-chloropyridin-4-yl)-N-cyclohexyl-5,7-dimethylimidazo[1,2-a]pyrimidin-3-amine" 
A1CC3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-(2-chloranylpyridin-4-yl)-~{N}-cyclohexyl-5,7-dimethyl-imidazo[1,2-a]pyrimidin-3-amine"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1CC3 "Create component" 2025-05-16 RCSB 
A1CC3 "Initial release"  2025-07-16 RCSB 
# 
