data_A1L77
# 
_chem_comp.id                                    A1L77 
_chem_comp.name                                  "(4~{S})-5-[4-[dibutyl-[4-(2-ethyl-2-oxidanyl-butoxy)-3-methyl-phenyl]silyl]-2-methyl-phenoxy]-4-oxidanyl-pentanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H52 O6 Si" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2025-02-27 
_chem_comp.pdbx_modified_date                    2025-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        572.848 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1L77 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9M19 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1L77 C10  C1  C  0 1 N N N N N N 15.764 4.430  25.808 0.767   2.413  -3.024 C10  A1L77 1  
A1L77 C13  C2  C  0 1 Y N N N N N 10.852 2.626  27.510 4.082   -0.436 0.379  C13  A1L77 2  
A1L77 C15  C3  C  0 1 Y N N N N N 11.643 4.060  25.767 2.662   0.336  -1.391 C15  A1L77 3  
A1L77 C17  C4  C  0 1 N N N N N N 9.493  0.789  27.213 5.571   -2.225 -0.103 C17  A1L77 4  
A1L77 C20  C5  C  0 1 N N N N N N 7.051  -0.642 29.711 8.760   -3.018 1.904  C20  A1L77 5  
A1L77 C21  C6  C  0 1 N N N N N N 7.805  -0.958 26.983 7.287   -4.008 -0.448 C21  A1L77 6  
A1L77 C22  C7  C  0 1 N N N N N N 6.981  0.058  26.251 6.215   -4.907 -1.067 C22  A1L77 7  
A1L77 C24  C8  C  0 1 N N N N N N 14.403 7.525  19.174 -5.161  -0.428 0.288  C24  A1L77 8  
A1L77 C28  C9  C  0 1 N N N N N N 13.727 8.177  15.877 -8.387  -2.361 1.101  C28  A1L77 9  
A1L77 C01  C10 C  0 1 Y N N N N N 13.270 5.445  21.646 -2.751  0.413  -0.605 C01  A1L77 10 
A1L77 C02  C11 C  0 1 Y N N N N N 13.546 6.741  21.294 -3.338  1.089  0.455  C02  A1L77 11 
A1L77 C03  C12 C  0 1 Y N N N N N 13.984 7.555  22.301 -2.686  2.170  1.030  C03  A1L77 12 
A1L77 C04  C13 C  0 1 Y N N N N N 14.134 7.114  23.585 -1.456  2.571  0.547  C04  A1L77 13 
A1L77 C05  C14 C  0 1 Y N N N N N 13.856 5.833  23.916 -0.873  1.895  -0.510 C05  A1L77 14 
A1L77 C06  C15 C  0 1 Y N N N N N 13.422 4.987  22.930 -1.521  0.817  -1.085 C06  A1L77 15 
A1L77 C09  C16 C  0 1 Y N N N N N 12.805 4.244  26.429 2.114   1.278  -0.539 C09  A1L77 16 
A1L77 C11  C17 C  0 1 Y N N N N N 12.981 3.633  27.635 2.556   1.372  0.767  C11  A1L77 17 
A1L77 C12  C18 C  0 1 Y N N N N N 12.024 2.831  28.188 3.535   0.514  1.230  C12  A1L77 18 
A1L77 C14  C19 C  0 1 Y N N N N N 10.683 3.255  26.320 3.645   -0.521 -0.935 C14  A1L77 19 
A1L77 C18  C20 C  0 1 N N N N N N 8.657  -0.214 27.966 6.641   -3.079 0.581  C18  A1L77 20 
A1L77 C19  C21 C  0 1 N N N N N N 7.752  0.454  28.943 7.710   -2.167 1.187  C19  A1L77 21 
A1L77 C25  C22 C  0 1 N N S N N N 14.340 6.814  17.835 -6.506  -0.723 0.953  C25  A1L77 22 
A1L77 C27  C23 C  0 1 N N N N N N 13.205 7.286  16.972 -7.104  -1.997 0.352  C27  A1L77 23 
A1L77 C29  C24 C  0 1 N N N N N N 13.296 7.690  14.527 -8.976  -3.615 0.508  C29  A1L77 24 
A1L77 C32  C25 C  0 1 N N N N N N 14.317 8.988  22.045 -3.320  2.908  2.182  C32  A1L77 25 
A1L77 C33  C26 C  0 1 N N N N N N 12.323 2.159  29.513 4.008   0.608  2.658  C33  A1L77 26 
A1L77 C34  C27 C  0 1 N N N N N N 14.557 6.860  26.585 1.154   4.168  -0.569 C34  A1L77 27 
A1L77 C35  C28 C  0 1 N N N N N N 13.590 7.125  27.677 1.505   4.134  0.919  C35  A1L77 28 
A1L77 C36  C29 C  0 1 N N N N N N 12.352 7.627  27.018 1.628   5.565  1.447  C36  A1L77 29 
A1L77 C37  C30 C  0 1 N N N N N N 11.637 8.309  28.164 1.980   5.531  2.936  C37  A1L77 30 
A1L77 C38  C31 C  0 1 N N N N N N 15.647 3.011  25.398 0.177   1.087  -3.508 C38  A1L77 31 
A1L77 C39  C32 C  0 1 N N N N N N 15.754 2.217  26.664 0.294   1.002  -5.031 C39  A1L77 32 
A1L77 C40  C33 C  0 1 N N N N N N 15.121 0.878  26.484 -0.295  -0.324 -5.515 C40  A1L77 33 
A1L77 O07  O1  O  0 1 N N N N N N 13.349 7.191  19.978 -4.548  0.693  0.929  O07  A1L77 34 
A1L77 O16  O2  O  0 1 N N N N N N 9.862  1.823  28.017 5.049   -1.277 0.830  O16  A1L77 35 
A1L77 O23  O3  O  0 1 N N N N N N 9.392  -1.145 28.600 6.038   -3.859 1.616  O23  A1L77 36 
A1L77 O26  O4  O  0 1 N N N N N N 14.149 5.458  18.033 -7.397  0.372  0.733  O26  A1L77 37 
A1L77 O30  O5  O  0 1 N N N N N N 13.435 6.520  14.287 -8.427  -4.161 -0.418 O30  A1L77 38 
A1L77 O31  O6  O  0 1 N N N N N N 12.836 8.459  13.688 -10.112 -4.125 1.010  O31  A1L77 39 
A1L77 SI08 SI1 SI 0 0 N N N N N N 14.140 5.306  25.697 0.790   2.440  -1.161 SI08 A1L77 40 
A1L77 H102 H1  H  0 0 N N N N N N 16.487 4.933  25.149 1.784   2.518  -3.402 H102 A1L77 41 
A1L77 H101 H2  H  0 0 N N N N N N 16.123 4.473  26.847 0.156   3.238  -3.391 H101 A1L77 42 
A1L77 H151 H3  H  0 0 N N N N N N 11.473 4.541  24.815 2.320   0.270  -2.413 H151 A1L77 43 
A1L77 H172 H4  H  0 0 N N N N N N 8.908  1.182  26.368 6.013   -1.698 -0.948 H172 A1L77 44 
A1L77 H171 H5  H  0 0 N N N N N N 10.396 0.290  26.833 4.765   -2.868 -0.457 H171 A1L77 45 
A1L77 H202 H6  H  0 0 N N N N N N 6.368  -0.195 30.448 9.456   -2.368 2.433  H202 A1L77 46 
A1L77 H203 H7  H  0 0 N N N N N N 6.477  -1.269 29.013 8.267   -3.679 2.617  H203 A1L77 47 
A1L77 H201 H8  H  0 0 N N N N N N 7.798  -1.261 30.231 9.305   -3.615 1.173  H201 A1L77 48 
A1L77 H212 H9  H  0 0 N N N N N N 8.441  -1.509 26.274 8.040   -4.626 0.042  H212 A1L77 49 
A1L77 H211 H10 H  0 0 N N N N N N 7.149  -1.665 27.512 7.758   -3.413 -1.230 H211 A1L77 50 
A1L77 H223 H11 H  0 0 N N N N N N 6.339  -0.450 25.517 6.665   -5.531 -1.839 H223 A1L77 51 
A1L77 H221 H12 H  0 0 N N N N N N 6.354  0.607  26.969 5.782   -5.542 -0.294 H221 A1L77 52 
A1L77 H222 H13 H  0 0 N N N N N N 7.646  0.763  25.731 5.434   -4.289 -1.509 H222 A1L77 53 
A1L77 H242 H14 H  0 0 N N N N N N 14.388 8.611  19.001 -4.511  -1.299 0.380  H242 A1L77 54 
A1L77 H241 H15 H  0 0 N N N N N N 15.339 7.247  19.681 -5.319  -0.202 -0.766 H241 A1L77 55 
A1L77 H282 H16 H  0 0 N N N N N N 13.342 9.196  16.030 -8.158  -2.529 2.153  H282 A1L77 56 
A1L77 H281 H17 H  0 0 N N N N N N 14.826 8.190  15.919 -9.105  -1.545 1.012  H281 A1L77 57 
A1L77 H011 H18 H  0 0 N N N N N N 12.921 4.761  20.886 -3.254  -0.432 -1.051 H011 A1L77 58 
A1L77 H041 H19 H  0 0 N N N N N N 14.479 7.798  24.346 -0.948  3.413  0.994  H041 A1L77 59 
A1L77 H061 H20 H  0 0 N N N N N N 13.199 3.957  23.164 -1.064  0.291  -1.910 H061 A1L77 60 
A1L77 H111 H21 H  0 0 N N N N N N 13.906 3.788  28.170 2.127   2.108  1.431  H111 A1L77 61 
A1L77 H141 H22 H  0 0 N N N N N N 9.754  3.115  25.787 4.072   -1.256 -1.600 H141 A1L77 62 
A1L77 H191 H23 H  0 0 N N N N N N 8.336  1.084  29.630 7.245   -1.486 1.901  H191 A1L77 63 
A1L77 H192 H24 H  0 0 N N N N N N 7.015  1.075  28.413 8.189   -1.592 0.395  H192 A1L77 64 
A1L77 H251 H25 H  0 0 N N N N N N 15.285 6.992  17.301 -6.359  -0.862 2.024  H251 A1L77 65 
A1L77 H272 H26 H  0 0 N N N N N N 12.701 6.416  16.525 -6.387  -2.812 0.441  H272 A1L77 66 
A1L77 H271 H27 H  0 0 N N N N N N 12.488 7.848  17.588 -7.334  -1.828 -0.701 H271 A1L77 67 
A1L77 H321 H28 H  0 0 N N N N N N 13.418 9.605  22.190 -3.007  2.452  3.121  H321 A1L77 68 
A1L77 H323 H29 H  0 0 N N N N N N 15.102 9.313  22.744 -3.007  3.951  2.161  H323 A1L77 69 
A1L77 H322 H30 H  0 0 N N N N N N 14.677 9.102  21.012 -4.405  2.852  2.095  H322 A1L77 70 
A1L77 H333 H31 H  0 0 N N N N N N 11.985 2.805  30.337 3.398   -0.041 3.286  H333 A1L77 71 
A1L77 H331 H32 H  0 0 N N N N N N 11.795 1.195  29.562 5.051   0.296  2.717  H331 A1L77 72 
A1L77 H332 H33 H  0 0 N N N N N N 13.406 1.989  29.602 3.917   1.638  3.003  H332 A1L77 73 
A1L77 H341 H34 H  0 0 N N N N N N 15.566 6.770  27.013 0.276   4.796  -0.721 H341 A1L77 74 
A1L77 H342 H35 H  0 0 N N N N N N 14.534 7.698  25.873 1.993   4.576  -1.132 H342 A1L77 75 
A1L77 H352 H36 H  0 0 N N N N N N 13.379 6.200  28.233 0.721   3.611  1.466  H352 A1L77 76 
A1L77 H351 H37 H  0 0 N N N N N N 13.990 7.883  28.366 2.453   3.614  1.057  H351 A1L77 77 
A1L77 H361 H38 H  0 0 N N N N N N 12.588 8.340  26.214 2.413   6.088  0.900  H361 A1L77 78 
A1L77 H362 H39 H  0 0 N N N N N N 11.753 6.799  26.610 0.680   6.086  1.310  H362 A1L77 79 
A1L77 H372 H40 H  0 0 N N N N N N 10.687 8.732  27.805 1.196   5.008  3.483  H372 A1L77 80 
A1L77 H371 H41 H  0 0 N N N N N N 11.435 7.575  28.958 2.928   5.010  3.073  H371 A1L77 81 
A1L77 H373 H42 H  0 0 N N N N N N 12.270 9.116  28.563 2.068   6.550  3.312  H373 A1L77 82 
A1L77 H382 H43 H  0 0 N N N N N N 14.677 2.830  24.912 0.723   0.260  -3.055 H382 A1L77 83 
A1L77 H381 H44 H  0 0 N N N N N N 16.459 2.743  24.706 -0.873  1.030  -3.221 H381 A1L77 84 
A1L77 H391 H45 H  0 0 N N N N N N 16.815 2.086  26.923 -0.251  1.829  -5.484 H391 A1L77 85 
A1L77 H392 H46 H  0 0 N N N N N N 15.242 2.755  27.475 1.344   1.059  -5.318 H392 A1L77 86 
A1L77 H401 H47 H  0 0 N N N N N N 15.205 0.304  27.418 0.251   -1.152 -5.061 H401 A1L77 87 
A1L77 H403 H48 H  0 0 N N N N N N 14.059 1.006  26.227 -1.345  -0.381 -5.228 H403 A1L77 88 
A1L77 H402 H49 H  0 0 N N N N N N 15.632 0.337  25.674 -0.212  -0.385 -6.600 H402 A1L77 89 
A1L77 H231 H50 H  0 0 N N N N N N 8.816  -1.748 29.056 5.350   -4.461 1.304  H231 A1L77 90 
A1L77 H261 H51 H  0 0 N N N N N N 14.110 5.017  17.192 -7.574  0.553  -0.201 H261 A1L77 91 
A1L77 H1   H52 H  0 1 N N N N N N 12.636 7.978  12.893 -10.451 -4.931 0.597  H1   A1L77 92 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1L77 C01  C02  DOUB Y N 1  
A1L77 C01  C06  SING Y N 2  
A1L77 C02  C03  SING Y N 3  
A1L77 C02  O07  SING N N 4  
A1L77 C03  C04  DOUB Y N 5  
A1L77 C03  C32  SING N N 6  
A1L77 C04  C05  SING Y N 7  
A1L77 C05  C06  DOUB Y N 8  
A1L77 C05  SI08 SING N N 9  
A1L77 O07  C24  SING N N 10 
A1L77 SI08 C09  SING N N 11 
A1L77 SI08 C10  SING N N 12 
A1L77 SI08 C34  SING N N 13 
A1L77 C09  C11  DOUB Y N 14 
A1L77 C09  C15  SING Y N 15 
A1L77 C10  C38  SING N N 16 
A1L77 C11  C12  SING Y N 17 
A1L77 C12  C13  DOUB Y N 18 
A1L77 C12  C33  SING N N 19 
A1L77 C13  C14  SING Y N 20 
A1L77 C13  O16  SING N N 21 
A1L77 C14  C15  DOUB Y N 22 
A1L77 O16  C17  SING N N 23 
A1L77 C17  C18  SING N N 24 
A1L77 C18  C19  SING N N 25 
A1L77 C18  C21  SING N N 26 
A1L77 C18  O23  SING N N 27 
A1L77 C19  C20  SING N N 28 
A1L77 C21  C22  SING N N 29 
A1L77 C24  C25  SING N N 30 
A1L77 C25  O26  SING N N 31 
A1L77 C25  C27  SING N N 32 
A1L77 C27  C28  SING N N 33 
A1L77 C28  C29  SING N N 34 
A1L77 C29  O30  DOUB N N 35 
A1L77 C29  O31  SING N N 36 
A1L77 C34  C35  SING N N 37 
A1L77 C35  C36  SING N N 38 
A1L77 C36  C37  SING N N 39 
A1L77 C38  C39  SING N N 40 
A1L77 C39  C40  SING N N 41 
A1L77 C10  H102 SING N N 42 
A1L77 C10  H101 SING N N 43 
A1L77 C15  H151 SING N N 44 
A1L77 C17  H172 SING N N 45 
A1L77 C17  H171 SING N N 46 
A1L77 C20  H202 SING N N 47 
A1L77 C20  H203 SING N N 48 
A1L77 C20  H201 SING N N 49 
A1L77 C21  H212 SING N N 50 
A1L77 C21  H211 SING N N 51 
A1L77 C22  H223 SING N N 52 
A1L77 C22  H221 SING N N 53 
A1L77 C22  H222 SING N N 54 
A1L77 C24  H242 SING N N 55 
A1L77 C24  H241 SING N N 56 
A1L77 C28  H282 SING N N 57 
A1L77 C28  H281 SING N N 58 
A1L77 C01  H011 SING N N 59 
A1L77 C04  H041 SING N N 60 
A1L77 C06  H061 SING N N 61 
A1L77 C11  H111 SING N N 62 
A1L77 C14  H141 SING N N 63 
A1L77 C19  H191 SING N N 64 
A1L77 C19  H192 SING N N 65 
A1L77 C25  H251 SING N N 66 
A1L77 C27  H272 SING N N 67 
A1L77 C27  H271 SING N N 68 
A1L77 C32  H321 SING N N 69 
A1L77 C32  H323 SING N N 70 
A1L77 C32  H322 SING N N 71 
A1L77 C33  H333 SING N N 72 
A1L77 C33  H331 SING N N 73 
A1L77 C33  H332 SING N N 74 
A1L77 C34  H341 SING N N 75 
A1L77 C34  H342 SING N N 76 
A1L77 C35  H352 SING N N 77 
A1L77 C35  H351 SING N N 78 
A1L77 C36  H361 SING N N 79 
A1L77 C36  H362 SING N N 80 
A1L77 C37  H372 SING N N 81 
A1L77 C37  H371 SING N N 82 
A1L77 C37  H373 SING N N 83 
A1L77 C38  H382 SING N N 84 
A1L77 C38  H381 SING N N 85 
A1L77 C39  H391 SING N N 86 
A1L77 C39  H392 SING N N 87 
A1L77 C40  H401 SING N N 88 
A1L77 C40  H403 SING N N 89 
A1L77 C40  H402 SING N N 90 
A1L77 O23  H231 SING N N 91 
A1L77 O26  H261 SING N N 92 
A1L77 O31  H1   SING N N 93 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1L77 InChI            InChI                1.06  "InChI=1S/C33H52O6Si/c1-7-11-19-40(20-12-8-2,29-15-17-31(26(6)22-29)39-24-33(37,9-3)10-4)28-14-16-30(25(5)21-28)38-23-27(34)13-18-32(35)36/h14-17,21-22,27,34,37H,7-13,18-20,23-24H2,1-6H3,(H,35,36)/t27-/m0/s1" 
A1L77 InChIKey         InChI                1.06  VIAQTQKQQPBVMW-MHZLTWQESA-N                                                                                                                                                                                      
A1L77 SMILES_CANONICAL CACTVS               3.385 "CCCC[Si](CCCC)(c1ccc(OC[C@@H](O)CCC(O)=O)c(C)c1)c2ccc(OCC(O)(CC)CC)c(C)c2"                                                                                                                                      
A1L77 SMILES           CACTVS               3.385 "CCCC[Si](CCCC)(c1ccc(OC[CH](O)CCC(O)=O)c(C)c1)c2ccc(OCC(O)(CC)CC)c(C)c2"                                                                                                                                        
A1L77 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC[Si](CCCC)(c1ccc(c(c1)C)OC[C@H](CCC(=O)O)O)c2ccc(c(c2)C)OCC(CC)(CC)O"                                                                                                                                       
A1L77 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCC[Si](CCCC)(c1ccc(c(c1)C)OCC(CCC(=O)O)O)c2ccc(c(c2)C)OCC(CC)(CC)O"                                                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           A1L77 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(4~{S})-5-[4-[dibutyl-[4-(2-ethyl-2-oxidanyl-butoxy)-3-methyl-phenyl]silyl]-2-methyl-phenoxy]-4-oxidanyl-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1L77 "Create component" 2025-02-27 PDBJ 
A1L77 "Initial release"  2025-06-11 RCSB 
# 
