data_A1ILA
# 
_chem_comp.id                                    A1ILA 
_chem_comp.name                                  "11-(4-aminocyclohexyl)-16-chloro-1,15-dihydroxy-10,10-dioxo-10lambda6-thia-2,11lambda6-diaza-1lambda6,15lambda6-diphospha-3-phosphoniapentacyclo[7.5.1.01,15.03,15.013,15]hexadecan-12-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H30 Cl N4 O5 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2024-08-14 
_chem_comp.pdbx_modified_date                    2025-04-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        566.112 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ILA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9GGW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ILA OBB  O1  O  0 1 N N N N N N 19.314 -1.553 54.909 -5.074 0.032  -0.288 OBB  A1ILA 1  
A1ILA CAS  C1  C  0 1 N N N N N N 18.557 -1.031 54.088 -3.900 -0.092 0.042  CAS  A1ILA 2  
A1ILA CAT  C2  C  0 1 Y N N N N N 17.721 -1.842 53.318 -3.094 1.125  0.172  CAT  A1ILA 3  
A1ILA CAZ  C3  C  0 1 Y N N N N N 16.522 -2.379 53.833 -1.711 1.135  0.007  CAZ  A1ILA 4  
A1ILA CAU  C4  C  0 1 Y N N N N N 18.049 -2.100 51.999 -3.743 2.339  0.484  CAU  A1ILA 5  
A1ILA OBA  O2  O  0 1 N N N N N N 19.169 -1.535 51.509 -5.088 2.373  0.654  OBA  A1ILA 6  
A1ILA CAV  C5  C  0 1 Y N N N N N 17.229 -2.878 51.191 -3.004 3.504  0.624  CAV  A1ILA 7  
A1ILA CAW  C6  C  0 1 Y N N N N N 16.059 -3.421 51.707 -1.632 3.486  0.469  CAW  A1ILA 8  
A1ILA CAX  C7  C  0 1 Y N N N N N 15.745 -3.163 53.023 -0.991 2.300  0.164  CAX  A1ILA 9  
A1ILA SAI  S1  S  0 1 N N N N N N 14.168 -3.782 53.704 0.763  2.258  -0.027 SAI  A1ILA 10 
A1ILA OAH  O3  O  0 1 N N N N N N 14.401 -4.467 54.991 1.298  3.112  0.975  OAH  A1ILA 11 
A1ILA OAY  O4  O  0 1 N N N N N N 13.604 -4.651 52.640 1.021  2.424  -1.414 OAY  A1ILA 12 
A1ILA NAJ  N1  N  0 1 N N N N N N 13.443 -2.418 53.997 1.238  0.721  0.361  NAJ  A1ILA 13 
A1ILA CAK  C8  C  0 1 Y N N N N N 12.697 -1.828 53.074 2.547  0.316  0.236  CAK  A1ILA 14 
A1ILA SBK  S2  S  0 1 Y N N N N N 12.063 -2.471 51.579 3.906  1.343  -0.184 SBK  A1ILA 15 
A1ILA CAF  C9  C  0 1 Y N N N N N 11.281 -0.942 51.265 4.995  -0.040 -0.093 CAF  A1ILA 16 
A1ILA CAE  C10 C  0 1 Y N N N N N 10.545 -0.648 50.205 6.374  -0.121 -0.287 CAE  A1ILA 17 
A1ILA CLBI CL1 CL 0 0 N N N N N N 10.323 -1.859 49.003 7.275  1.309  -0.686 CLBI A1ILA 18 
A1ILA CAD  C11 C  0 1 Y N N N N N 9.976  0.612  50.046 7.025  -1.329 -0.166 CAD  A1ILA 19 
A1ILA CAC  C12 C  0 1 Y N N N N N 10.179 1.554  51.036 6.302  -2.469 0.144  CAC  A1ILA 20 
A1ILA CAB  C13 C  0 1 Y N N N N N 10.963 1.192  52.136 4.939  -2.408 0.336  CAB  A1ILA 21 
A1ILA OAA  O5  O  0 1 N N N N N N 11.163 2.097  53.117 4.271  -3.562 0.605  OAA  A1ILA 22 
A1ILA CAG  C14 C  0 1 Y N N N N N 11.517 -0.038 52.257 4.249  -1.177 0.239  CAG  A1ILA 23 
A1ILA NAL  N2  N  1 1 Y N N N N N 12.277 -0.545 53.256 2.945  -0.901 0.428  NAL  A1ILA 24 
A1ILA CAM  C15 C  0 1 N N N N N N 12.753 0.164  54.475 1.968  -1.906 0.852  CAM  A1ILA 25 
A1ILA CAN  C16 C  0 1 N N N N N N 13.947 1.165  54.070 1.190  -2.412 -0.364 CAN  A1ILA 26 
A1ILA CAO  C17 C  0 1 N N N N N N 15.341 0.443  53.908 -0.134 -3.025 0.095  CAO  A1ILA 27 
A1ILA CAP  C18 C  0 1 N N N N N N 16.384 1.505  53.544 -1.304 -2.193 -0.435 CAP  A1ILA 28 
A1ILA CAQ  C19 C  0 1 N N N N N N 17.650 0.942  52.912 -2.129 -1.661 0.737  CAQ  A1ILA 29 
A1ILA NAR  N3  N  0 1 N N N N N N 18.539 0.307  53.940 -3.493 -1.353 0.289  NAR  A1ILA 30 
A1ILA CBC  C20 C  0 1 N N N N N N 19.508 1.137  54.739 -4.460 -2.452 0.116  CBC  A1ILA 31 
A1ILA CBD  C21 C  0 1 N N N N N N 19.030 2.507  55.102 -4.963 -2.467 -1.329 CBD  A1ILA 32 
A1ILA CBE  C22 C  0 1 N N N N N N 20.125 3.274  55.862 -5.644 -1.135 -1.645 CBE  A1ILA 33 
A1ILA CBF  C23 C  0 1 N N N N N N 21.421 3.344  55.057 -6.826 -0.928 -0.696 CBF  A1ILA 34 
A1ILA NBJ  N4  N  0 1 N N N N N N 21.398 4.182  53.842 -7.480 0.351  -1.000 NBJ  A1ILA 35 
A1ILA CBG  C24 C  0 1 N N N N N N 21.867 1.942  54.701 -6.323 -0.913 0.749  CBG  A1ILA 36 
A1ILA CBH  C25 C  0 1 N N N N N N 20.787 1.193  53.910 -5.641 -2.246 1.066  CBH  A1ILA 37 
A1ILA H1   H1  H  0 1 N N N N N N 16.222 -2.175 54.850 -1.186 0.228  -0.253 H1   A1ILA 38 
A1ILA H2   H2  H  0 1 N N N N N N 19.602 -1.043 52.196 -5.373 2.218  1.564  H2   A1ILA 39 
A1ILA H3   H3  H  0 1 N N N N N N 17.501 -3.061 50.162 -3.506 4.432  0.857  H3   A1ILA 40 
A1ILA H4   H4  H  0 1 N N N N N N 15.412 -4.030 51.092 -1.063 4.397  0.583  H4   A1ILA 41 
A1ILA H5   H5  H  0 1 N N N N N N 13.546 -1.989 54.894 0.574  0.091  0.688  H5   A1ILA 42 
A1ILA H6   H6  H  0 1 N N N N N N 9.390  0.848  49.170 8.093  -1.386 -0.311 H6   A1ILA 43 
A1ILA H7   H7  H  0 1 N N N N N N 9.745  2.540  50.963 6.810  -3.418 0.237  H7   A1ILA 44 
A1ILA H8   H8  H  0 1 N N N N N N 11.710 1.716  53.794 4.206  -3.768 1.548  H8   A1ILA 45 
A1ILA H9   H9  H  0 1 N N N N N N 11.924 0.738  54.914 2.453  -2.732 1.359  H9   A1ILA 46 
A1ILA H10  H10 H  0 1 N N N N N N 13.120 -0.569 55.208 1.265  -1.441 1.552  H10  A1ILA 47 
A1ILA H11  H11 H  0 1 N N N N N N 14.040 1.932  54.853 0.993  -1.580 -1.041 H11  A1ILA 48 
A1ILA H12  H12 H  0 1 N N N N N N 13.690 1.646  53.115 1.779  -3.168 -0.884 H12  A1ILA 49 
A1ILA H13  H13 H  0 1 N N N N N N 15.281 -0.310 53.109 -0.213 -4.043 -0.289 H13  A1ILA 50 
A1ILA H14  H14 H  0 1 N N N N N N 15.620 -0.046 54.853 -0.167 -3.046 1.184  H14  A1ILA 51 
A1ILA H15  H15 H  0 1 N N N N N N 16.665 2.042  54.462 -0.924 -1.364 -1.029 H15  A1ILA 52 
A1ILA H16  H16 H  0 1 N N N N N N 15.927 2.209  52.833 -1.931 -2.824 -1.068 H16  A1ILA 53 
A1ILA H17  H17 H  0 1 N N N N N N 17.371 0.185  52.164 -2.179 -2.439 1.510  H17  A1ILA 54 
A1ILA H18  H18 H  0 1 N N N N N N 18.198 1.759  52.420 -1.656 -0.785 1.169  H18  A1ILA 55 
A1ILA H19  H19 H  0 1 N N N N N N 19.734 0.595  55.669 -3.974 -3.402 0.342  H19  A1ILA 56 
A1ILA H20  H20 H  0 1 N N N N N N 18.774 3.056  54.184 -4.120 -2.615 -2.005 H20  A1ILA 57 
A1ILA H21  H21 H  0 1 N N N N N N 18.138 2.422  55.740 -5.677 -3.280 -1.456 H21  A1ILA 58 
A1ILA H22  H22 H  0 1 N N N N N N 20.324 2.762  56.815 -4.929 -0.322 -1.518 H22  A1ILA 59 
A1ILA H23  H23 H  0 1 N N N N N N 19.772 4.297  56.061 -6.002 -1.146 -2.675 H23  A1ILA 60 
A1ILA H24  H24 H  0 1 N N N N N N 22.187 3.761  55.727 -7.541 -1.741 -0.824 H24  A1ILA 61 
A1ILA H25  H25 H  0 1 N N N N N N 21.103 5.107  54.080 -8.265 0.511  -0.386 H25  A1ILA 62 
A1ILA H26  H26 H  0 1 N N N N N N 22.315 4.217  53.444 -6.822 1.115  -0.952 H26  A1ILA 63 
A1ILA H28  H28 H  0 1 N N N N N N 22.080 1.389  55.627 -5.608 -0.100 0.876  H28  A1ILA 64 
A1ILA H29  H29 H  0 1 N N N N N N 22.780 2.001  54.091 -7.165 -0.766 1.425  H29  A1ILA 65 
A1ILA H30  H30 H  0 1 N N N N N N 20.590 1.721  52.965 -6.356 -3.059 0.938  H30  A1ILA 66 
A1ILA H31  H31 H  0 1 N N N N N N 21.131 0.171  53.694 -5.283 -2.235 2.095  H31  A1ILA 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ILA CLBI CAE SING N N 1  
A1ILA CAD  CAE DOUB Y N 2  
A1ILA CAD  CAC SING Y N 3  
A1ILA CAE  CAF SING Y N 4  
A1ILA CAC  CAB DOUB Y N 5  
A1ILA CAV  CAW DOUB Y N 6  
A1ILA CAV  CAU SING Y N 7  
A1ILA CAF  SBK SING Y N 8  
A1ILA CAF  CAG DOUB Y N 9  
A1ILA OBA  CAU SING N N 10 
A1ILA SBK  CAK SING Y N 11 
A1ILA CAW  CAX SING Y N 12 
A1ILA CAU  CAT DOUB Y N 13 
A1ILA CAB  CAG SING Y N 14 
A1ILA CAB  OAA SING N N 15 
A1ILA CAG  NAL SING Y N 16 
A1ILA OAY  SAI DOUB N N 17 
A1ILA CAQ  CAP SING N N 18 
A1ILA CAQ  NAR SING N N 19 
A1ILA CAX  SAI SING N N 20 
A1ILA CAX  CAZ DOUB Y N 21 
A1ILA CAK  NAL DOUB Y N 22 
A1ILA CAK  NAJ SING N N 23 
A1ILA NAL  CAM SING N N 24 
A1ILA CAT  CAZ SING Y N 25 
A1ILA CAT  CAS SING N N 26 
A1ILA CAP  CAO SING N N 27 
A1ILA SAI  NAJ SING N N 28 
A1ILA SAI  OAH DOUB N N 29 
A1ILA NBJ  CBF SING N N 30 
A1ILA CAO  CAN SING N N 31 
A1ILA CBH  CBG SING N N 32 
A1ILA CBH  CBC SING N N 33 
A1ILA NAR  CAS SING N N 34 
A1ILA NAR  CBC SING N N 35 
A1ILA CAN  CAM SING N N 36 
A1ILA CAS  OBB DOUB N N 37 
A1ILA CBG  CBF SING N N 38 
A1ILA CBC  CBD SING N N 39 
A1ILA CBF  CBE SING N N 40 
A1ILA CBD  CBE SING N N 41 
A1ILA CAZ  H1  SING N N 42 
A1ILA OBA  H2  SING N N 43 
A1ILA CAV  H3  SING N N 44 
A1ILA CAW  H4  SING N N 45 
A1ILA NAJ  H5  SING N N 46 
A1ILA CAD  H6  SING N N 47 
A1ILA CAC  H7  SING N N 48 
A1ILA OAA  H8  SING N N 49 
A1ILA CAM  H9  SING N N 50 
A1ILA CAM  H10 SING N N 51 
A1ILA CAN  H11 SING N N 52 
A1ILA CAN  H12 SING N N 53 
A1ILA CAO  H13 SING N N 54 
A1ILA CAO  H14 SING N N 55 
A1ILA CAP  H15 SING N N 56 
A1ILA CAP  H16 SING N N 57 
A1ILA CAQ  H17 SING N N 58 
A1ILA CAQ  H18 SING N N 59 
A1ILA CBC  H19 SING N N 60 
A1ILA CBD  H20 SING N N 61 
A1ILA CBD  H21 SING N N 62 
A1ILA CBE  H22 SING N N 63 
A1ILA CBE  H23 SING N N 64 
A1ILA CBF  H24 SING N N 65 
A1ILA NBJ  H25 SING N N 66 
A1ILA NBJ  H26 SING N N 67 
A1ILA CBG  H28 SING N N 68 
A1ILA CBG  H29 SING N N 69 
A1ILA CBH  H30 SING N N 70 
A1ILA CBH  H31 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ILA InChI            InChI                1.06  "InChI=1S/C25H29ClN4O5S2/c26-19-9-11-21(32)22-23(19)36-25-28-37(34,35)17-8-10-20(31)18(14-17)24(33)29(12-2-1-3-13-30(22)25)16-6-4-15(27)5-7-16/h8-11,14-16H,1-7,12-13,27H2,(H2,31,32,33)/p+1/b28-25-/t15-,16+" 
A1ILA InChIKey         InChI                1.06  JSOIOCQUBZSCHE-KEGTYITRSA-O                                                                                                                                                                                    
A1ILA SMILES_CANONICAL CACTVS               3.385 "N[C@H]1CC[C@H](CC1)N2CCCCC[n+]3c(N[S](=O)(=O)c4ccc(O)c(c4)C2=O)sc5c(Cl)ccc(O)c35"                                                                                                                             
A1ILA SMILES           CACTVS               3.385 "N[CH]1CC[CH](CC1)N2CCCCC[n+]3c(N[S](=O)(=O)c4ccc(O)c(c4)C2=O)sc5c(Cl)ccc(O)c35"                                                                                                                               
A1ILA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c2cc1S(=O)(=O)Nc3[n+](c4c(ccc(c4s3)Cl)O)CCCCCN(C2=O)C5CCC(CC5)N)O"                                                                                                                                       
A1ILA SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c2cc1S(=O)(=O)Nc3[n+](c4c(ccc(c4s3)Cl)O)CCCCCN(C2=O)C5CCC(CC5)N)O"                                                                                                                                       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ILA "Create component" 2024-08-14 PDBE 
A1ILA "Initial release"  2025-04-16 RCSB 
# 
