data_A1BAQ
# 
_chem_comp.id                                    A1BAQ 
_chem_comp.name                                  "[(2R,4S)-4-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H18 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-09-25 
_chem_comp.pdbx_modified_date                    2025-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        246.308 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1BAQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7HF3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1BAQ O1  O1  O 0 1 N N N N N N 15.666 -2.348 -0.017 -3.125 -2.035 0.219  O1  A1BAQ 1  
A1BAQ C1  C1  C 0 1 N N N N N N 11.704 0.304  1.286  -3.568 0.528  1.129  C1  A1BAQ 2  
A1BAQ C2  C2  C 0 1 N N S N N N 12.584 0.751  0.065  -3.192 1.313  -0.129 C2  A1BAQ 3  
A1BAQ C3  C3  C 0 1 N N N N N N 13.083 2.218  0.266  -1.989 2.212  0.170  C3  A1BAQ 4  
A1BAQ C4  C4  C 0 1 N N N N N N 14.542 2.375  0.803  -0.789 1.340  0.550  C4  A1BAQ 5  
A1BAQ C5  C5  C 0 1 Y N N N N N 15.137 1.046  2.958  0.680  -0.286 -0.298 C5  A1BAQ 6  
A1BAQ C6  C6  C 0 1 Y N N N N N 14.929 -0.222 5.017  1.764  -2.296 0.032  C6  A1BAQ 7  
A1BAQ C7  C7  C 0 1 Y N N N N N 15.324 1.994  5.238  3.058  -0.396 0.123  C7  A1BAQ 8  
A1BAQ C8  C8  C 0 1 Y N N N N N 15.347 2.217  3.803  1.908  0.373  -0.131 C8  A1BAQ 9  
A1BAQ C10 C9  C 0 1 Y N N N N N 15.714 4.203  4.945  3.669  1.763  0.078  C10 A1BAQ 10 
A1BAQ C11 C10 C 0 1 N N R N N N 15.179 0.018  0.414  -1.601 -0.479 -0.829 C11 A1BAQ 11 
A1BAQ C12 C11 C 0 1 N N N N N N 15.857 -1.327 0.946  -1.932 -1.278 0.433  C12 A1BAQ 12 
A1BAQ C13 C12 C 0 1 N N N N N N 13.742 -0.296 -0.161 -2.825 0.338  -1.251 C13 A1BAQ 13 
A1BAQ C9  C13 C 0 1 Y N N N N N 15.607 3.661  3.673  2.346  1.768  -0.153 C9  A1BAQ 14 
A1BAQ N1  N1  N 0 1 N N N N N N 15.122 1.146  1.448  -0.477 0.425  -0.555 N1  A1BAQ 15 
A1BAQ N2  N2  N 0 1 Y N N N N N 14.929 -0.139 3.617  0.660  -1.613 -0.209 N2  A1BAQ 16 
A1BAQ N3  N3  N 0 1 Y N N N N N 15.124 0.798  5.870  2.935  -1.721 0.195  N3  A1BAQ 17 
A1BAQ N4  N4  N 0 1 Y N N N N N 15.546 3.199  5.816  4.107  0.474  0.244  N4  A1BAQ 18 
A1BAQ H16 H1  H 0 1 N N N N N N 16.066 -3.153 0.291  -3.395 -2.567 0.980  H16 A1BAQ 19 
A1BAQ H3  H2  H 0 1 N N N N N N 10.897 1.034  1.444  -4.426 0.999  1.608  H3  A1BAQ 20 
A1BAQ H4  H3  H 0 1 N N N N N N 11.269 -0.685 1.081  -3.822 -0.496 0.855  H4  A1BAQ 21 
A1BAQ H5  H4  H 0 1 N N N N N N 12.330 0.250  2.189  -2.725 0.521  1.819  H5  A1BAQ 22 
A1BAQ H1  H5  H 0 1 N N N N N N 11.944 0.735  -0.830 -4.036 1.928  -0.441 H1  A1BAQ 23 
A1BAQ H7  H6  H 0 1 N N N N N N 13.025 2.730  -0.706 -1.745 2.800  -0.715 H7  A1BAQ 24 
A1BAQ H6  H7  H 0 1 N N N N N N 12.406 2.709  0.981  -2.230 2.880  0.997  H6  A1BAQ 25 
A1BAQ H9  H8  H 0 1 N N N N N N 15.188 2.653  -0.043 0.073  1.976  0.749  H9  A1BAQ 26 
A1BAQ H8  H9  H 0 1 N N N N N N 14.545 3.184  1.548  -1.029 0.763  1.443  H8  A1BAQ 27 
A1BAQ H10 H10 H 0 1 N N N N N N 14.756 -1.196 5.450  1.703  -3.373 0.096  H10 A1BAQ 28 
A1BAQ H12 H11 H 0 1 N N N N N N 15.898 5.239  5.188  4.295  2.642  0.125  H12 A1BAQ 29 
A1BAQ H2  H12 H 0 1 N N N N N N 15.792 0.371  -0.428 -1.329 -1.165 -1.632 H2  A1BAQ 30 
A1BAQ H14 H13 H 0 1 N N N N N N 15.391 -1.624 1.897  -2.081 -0.593 1.268  H14 A1BAQ 31 
A1BAQ H15 H14 H 0 1 N N N N N N 16.933 -1.162 1.101  -1.109 -1.955 0.661  H15 A1BAQ 32 
A1BAQ H17 H15 H 0 1 N N N N N N 13.413 -1.243 0.291  -3.663 -0.333 -1.439 H17 A1BAQ 33 
A1BAQ H18 H16 H 0 1 N N N N N N 13.851 -0.427 -1.248 -2.594 0.896  -2.158 H18 A1BAQ 34 
A1BAQ H11 H17 H 0 1 N N N N N N 15.699 4.205  2.745  1.725  2.635  -0.322 H11 A1BAQ 35 
A1BAQ H13 H18 H 0 1 N N N N N N 15.581 3.328  6.807  5.025  0.217  0.421  H13 A1BAQ 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1BAQ C13 C2  SING N N 1  
A1BAQ C13 C11 SING N N 2  
A1BAQ O1  C12 SING N N 3  
A1BAQ C2  C3  SING N N 4  
A1BAQ C2  C1  SING N N 5  
A1BAQ C3  C4  SING N N 6  
A1BAQ C11 C12 SING N N 7  
A1BAQ C11 N1  SING N N 8  
A1BAQ C4  N1  SING N N 9  
A1BAQ N1  C5  SING N N 10 
A1BAQ C5  N2  DOUB Y N 11 
A1BAQ C5  C8  SING Y N 12 
A1BAQ N2  C6  SING Y N 13 
A1BAQ C9  C8  SING Y N 14 
A1BAQ C9  C10 DOUB Y N 15 
A1BAQ C8  C7  DOUB Y N 16 
A1BAQ C10 N4  SING Y N 17 
A1BAQ C6  N3  DOUB Y N 18 
A1BAQ C7  N4  SING Y N 19 
A1BAQ C7  N3  SING Y N 20 
A1BAQ O1  H16 SING N N 21 
A1BAQ C1  H3  SING N N 22 
A1BAQ C1  H4  SING N N 23 
A1BAQ C1  H5  SING N N 24 
A1BAQ C2  H1  SING N N 25 
A1BAQ C3  H7  SING N N 26 
A1BAQ C3  H6  SING N N 27 
A1BAQ C4  H9  SING N N 28 
A1BAQ C4  H8  SING N N 29 
A1BAQ C6  H10 SING N N 30 
A1BAQ C10 H12 SING N N 31 
A1BAQ C11 H2  SING N N 32 
A1BAQ C12 H14 SING N N 33 
A1BAQ C12 H15 SING N N 34 
A1BAQ C13 H17 SING N N 35 
A1BAQ C13 H18 SING N N 36 
A1BAQ C9  H11 SING N N 37 
A1BAQ N4  H13 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1BAQ SMILES           ACDLabs              14.52   "OCC1CC(C)CCN1c1ncnc2[NH]ccc12"                                                                                                 
A1BAQ InChI            InChI                1.06    "InChI=1S/C13H18N4O/c1-9-3-5-17(10(6-9)7-18)13-11-2-4-14-12(11)15-8-16-13/h2,4,8-10,18H,3,5-7H2,1H3,(H,14,15,16)/t9-,10+/m0/s1" 
A1BAQ InChIKey         InChI                1.06    WWFHMNWJIHDZIZ-VHSXEESVSA-N                                                                                                     
A1BAQ SMILES_CANONICAL CACTVS               3.385   "C[C@H]1CCN([C@@H](CO)C1)c2ncnc3[nH]ccc23"                                                                                      
A1BAQ SMILES           CACTVS               3.385   "C[CH]1CCN([CH](CO)C1)c2ncnc3[nH]ccc23"                                                                                         
A1BAQ SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1CCN([C@H](C1)CO)c2c3cc[nH]c3ncn2"                                                                                       
A1BAQ SMILES           "OpenEye OEToolkits" 3.1.0.0 "CC1CCN(C(C1)CO)c2c3cc[nH]c3ncn2"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1BAQ "SYSTEMATIC NAME" ACDLabs              14.52   "[(2R,4S)-4-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol"          
A1BAQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{R},4~{S})-4-methyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1BAQ "Create component" 2024-09-25 RCSB 
A1BAQ "Initial release"  2025-06-11 RCSB 
# 
