data_A1EOR
# 
_chem_comp.id                                    A1EOR 
_chem_comp.name                                  "(2~{R},4~{S})-2-[(1~{R})-1-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanyl-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H21 N3 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Amoxicilloic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2025-04-04 
_chem_comp.pdbx_modified_date                    2025-07-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        383.419 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1EOR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9U9C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1EOR C4   C1  C 0 1 N N R N N N -18.276 18.399 -25.133 -0.663 1.668  -0.129 C4   A1EOR 1  
A1EOR N3   N1  N 0 1 N N N N N N -19.660 18.051 -25.393 0.610  1.366  0.530  N3   A1EOR 2  
A1EOR C2   C2  C 0 1 N N N N N N -20.368 17.180 -24.683 1.763  1.846  0.021  C2   A1EOR 3  
A1EOR N6   N2  N 0 1 N N N N N N -15.890 17.937 -25.709 -1.249 -0.745 -0.318 N6   A1EOR 4  
A1EOR C5   C3  C 0 1 N N R N N N -17.243 17.417 -25.706 -1.683 0.579  0.209  C5   A1EOR 5  
A1EOR C8   C4  C 0 1 N N N N N N -14.030 18.673 -27.156 -2.526 -2.404 0.891  C8   A1EOR 6  
A1EOR C11  C5  C 0 1 N N N N N N -15.928 17.147 -28.004 -3.712 -0.951 -0.729 C11  A1EOR 7  
A1EOR C12  C6  C 0 1 N N N N N N -15.115 15.861 -27.812 -4.751 -1.243 0.355  C12  A1EOR 8  
A1EOR C13  C7  C 0 1 N N N N N N -15.972 17.549 -29.476 -4.240 -1.366 -2.104 C13  A1EOR 9  
A1EOR C15  C8  C 0 1 N N N N N N -18.105 19.850 -25.619 -1.174 3.002  0.353  C15  A1EOR 10 
A1EOR C18  C9  C 0 1 N N R N N N -21.830 17.026 -25.136 3.072  1.535  0.699  C18  A1EOR 11 
A1EOR C20  C10 C 0 1 Y N N N N N -22.024 16.070 -26.303 3.522  0.150  0.312  C20  A1EOR 12 
A1EOR C21  C11 C 0 1 Y N N N N N -23.202 16.115 -27.040 3.314  -0.910 1.175  C21  A1EOR 13 
A1EOR C22  C12 C 0 1 Y N N N N N -23.418 15.249 -28.098 3.726  -2.180 0.823  C22  A1EOR 14 
A1EOR C23  C13 C 0 1 Y N N N N N -22.449 14.315 -28.434 4.348  -2.393 -0.399 C23  A1EOR 15 
A1EOR C25  C14 C 0 1 Y N N N N N -21.269 14.258 -27.706 4.555  -1.328 -1.264 C25  A1EOR 16 
A1EOR C26  C15 C 0 1 Y N N N N N -21.066 15.131 -26.651 4.137  -0.060 -0.909 C26  A1EOR 17 
A1EOR C7   C16 C 0 1 N N S N N N -15.508 18.263 -27.079 -2.384 -1.668 -0.416 C7   A1EOR 18 
A1EOR N19  N3  N 0 1 N N N N N N -22.563 16.651 -24.179 4.085  2.514  0.280  N19  A1EOR 19 
A1EOR O1   O1  O 0 1 N N N N N N -19.985 16.734 -23.605 1.745  2.528  -0.982 O1   A1EOR 20 
A1EOR O10  O2  O 0 1 N N N N N N -13.663 19.325 -28.155 -2.007 -1.967 1.891  O10  A1EOR 21 
A1EOR O16  O3  O 0 1 N N N N N N -19.093 20.377 -26.187 -2.003 3.721  -0.419 O16  A1EOR 22 
A1EOR O17  O4  O 0 1 N N N N N N -17.065 20.448 -25.339 -0.836 3.423  1.434  O17  A1EOR 23 
A1EOR O24  O5  O 0 1 N N N N N N -22.643 13.455 -29.478 4.753  -3.642 -0.748 O24  A1EOR 24 
A1EOR O9   O6  O 0 1 N N N N N N -13.314 18.362 -26.173 -3.230 -3.546 0.946  O9   A1EOR 25 
A1EOR S14  S1  S 0 1 N N N N N N -17.654 16.886 -27.408 -3.252 0.827  -0.722 S14  A1EOR 26 
A1EOR H4   H1  H 0 1 N N N N N N -18.132 18.411 -24.043 -0.514 1.704  -1.208 H4   A1EOR 27 
A1EOR H3   H2  H 0 1 N N N N N N -20.114 18.500 -26.163 0.624  0.821  1.332  H3   A1EOR 28 
A1EOR H6   H3  H 0 1 N N N N N N -15.846 18.761 -25.144 -0.786 -0.646 -1.209 H6   A1EOR 29 
A1EOR H5   H5  H 0 1 N N N N N N -17.276 16.497 -25.103 -1.865 0.534  1.283  H5   A1EOR 30 
A1EOR H12A H6  H 0 0 N N N N N N -15.472 15.093 -28.514 -4.963 -2.312 0.377  H12A A1EOR 31 
A1EOR H12C H7  H 0 0 N N N N N N -14.052 16.068 -28.004 -4.362 -0.930 1.324  H12C A1EOR 32 
A1EOR H12B H8  H 0 0 N N N N N N -15.238 15.500 -26.780 -5.667 -0.696 0.137  H12B A1EOR 33 
A1EOR H13A H9  H 0 0 N N N N N N -16.285 16.687 -30.083 -5.156 -0.818 -2.322 H13A A1EOR 34 
A1EOR H13B H10 H 0 0 N N N N N N -16.690 18.371 -29.610 -3.492 -1.139 -2.864 H13B A1EOR 35 
A1EOR H13C H11 H 0 0 N N N N N N -14.973 17.879 -29.796 -4.447 -2.436 -2.106 H13C A1EOR 36 
A1EOR H18  H12 H 0 1 N N N N N N -22.150 18.018 -25.488 2.943  1.587  1.780  H18  A1EOR 37 
A1EOR H21  H13 H 0 1 N N N N N N -23.962 16.838 -26.783 2.830  -0.743 2.126  H21  A1EOR 38 
A1EOR H22  H14 H 0 1 N N N N N N -24.339 15.300 -28.660 3.563  -3.008 1.498  H22  A1EOR 39 
A1EOR H25  H15 H 0 1 N N N N N N -20.510 13.534 -27.962 5.039  -1.491 -2.215 H25  A1EOR 40 
A1EOR H26  H16 H 0 1 N N N N N N -20.145 15.079 -26.089 4.298  0.769  -1.582 H26  A1EOR 41 
A1EOR H7   H17 H 0 1 N N N N N N -16.089 19.149 -27.374 -2.182 -2.391 -1.206 H7   A1EOR 42 
A1EOR H19B H18 H 0 0 N N N N N N -23.506 16.558 -24.498 4.955  2.366  0.769  H19B A1EOR 43 
A1EOR H9   H19 H 0 1 N N N N N N -22.239 15.769 -23.837 4.223  2.486  -0.720 H9   A1EOR 44 
A1EOR H8   H21 H 0 1 N N N N N N -18.908 21.293 -26.360 -2.305 4.570  -0.068 H8   A1EOR 45 
A1EOR H24  H22 H 0 1 N N N N N N -21.886 12.888 -29.567 4.085  -4.155 -1.223 H24  A1EOR 46 
A1EOR H2   H23 H 0 1 N N N N N N -12.436 18.701 -26.301 -3.293 -3.982 1.806  H2   A1EOR 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1EOR O1  C2   DOUB N N 1  
A1EOR C2  N3   SING N N 2  
A1EOR N3  C4   SING N N 3  
A1EOR C4  C5   SING N N 4  
A1EOR C5  N6   SING N N 5  
A1EOR N6  C7   SING N N 6  
A1EOR C7  C8   SING N N 7  
A1EOR C8  O9   SING N N 8  
A1EOR C8  O10  DOUB N N 9  
A1EOR C7  C11  SING N N 10 
A1EOR C11 C12  SING N N 11 
A1EOR C11 C13  SING N N 12 
A1EOR C11 S14  SING N N 13 
A1EOR C4  C15  SING N N 14 
A1EOR C15 O16  SING N N 15 
A1EOR C15 O17  DOUB N N 16 
A1EOR C2  C18  SING N N 17 
A1EOR C18 N19  SING N N 18 
A1EOR C18 C20  SING N N 19 
A1EOR C20 C21  DOUB Y N 20 
A1EOR C21 C22  SING Y N 21 
A1EOR C22 C23  DOUB Y N 22 
A1EOR C23 O24  SING N N 23 
A1EOR C23 C25  SING Y N 24 
A1EOR C25 C26  DOUB Y N 25 
A1EOR S14 C5   SING N N 26 
A1EOR C26 C20  SING Y N 27 
A1EOR C4  H4   SING N N 28 
A1EOR N3  H3   SING N N 29 
A1EOR N6  H6   SING N N 30 
A1EOR C5  H5   SING N N 31 
A1EOR C12 H12A SING N N 32 
A1EOR C12 H12C SING N N 33 
A1EOR C12 H12B SING N N 34 
A1EOR C13 H13A SING N N 35 
A1EOR C13 H13B SING N N 36 
A1EOR C13 H13C SING N N 37 
A1EOR C18 H18  SING N N 38 
A1EOR C21 H21  SING N N 39 
A1EOR C22 H22  SING N N 40 
A1EOR C25 H25  SING N N 41 
A1EOR C26 H26  SING N N 42 
A1EOR C7  H7   SING N N 43 
A1EOR N19 H19B SING N N 44 
A1EOR N19 H9   SING N N 45 
A1EOR O16 H8   SING N N 46 
A1EOR O24 H24  SING N N 47 
A1EOR O9  H2   SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1EOR InChI            InChI                1.06  "InChI=1S/C16H21N3O6S/c1-16(2)11(15(24)25)19-13(26-16)10(14(22)23)18-12(21)9(17)7-3-5-8(20)6-4-7/h3-6,9-11,13,19-20H,17H2,1-2H3,(H,18,21)(H,22,23)(H,24,25)/t9-,10+,11+,13-/m1/s1" 
A1EOR InChIKey         InChI                1.06  LHHKJQFIKHAUIA-MPPDQPJWSA-N                                                                                                                                                        
A1EOR SMILES_CANONICAL CACTVS               3.385 "CC1(C)S[C@@H](N[C@H]1C(O)=O)[C@H](NC(=O)[C@H](N)c2ccc(O)cc2)C(O)=O"                                                                                                               
A1EOR SMILES           CACTVS               3.385 "CC1(C)S[CH](N[CH]1C(O)=O)[CH](NC(=O)[CH](N)c2ccc(O)cc2)C(O)=O"                                                                                                                    
A1EOR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H](N[C@H](S1)[C@@H](C(=O)O)NC(=O)[C@@H](c2ccc(cc2)O)N)C(=O)O)C"                                                                                                           
A1EOR SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C(NC(S1)C(C(=O)O)NC(=O)C(c2ccc(cc2)O)N)C(=O)O)C"                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           A1EOR 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},4~{S})-2-[(1~{R})-1-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanyl-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1EOR 
_pdbx_chem_comp_synonyms.name         "Amoxicilloic acid" 
_pdbx_chem_comp_synonyms.provenance   PUBCHEM 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1EOR "Create component" 2025-04-04 PDBC 
A1EOR "Initial release"  2025-07-09 RCSB 
# 
