data_YDT
# 
_chem_comp.id                                    YDT 
_chem_comp.name                                  "N-[(5-fluoranyl-1-benzofuran-4-yl)methyl]-1,5-dimethyl-4-(1,4,6,7-tetrahydropyrazolo[4,3-c]pyridin-5-ylsulfonyl)pyrrole-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H22 F N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-12-03 
_chem_comp.pdbx_modified_date                    2024-10-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        471.505 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YDT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8R7B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YDT C5  C1  C 0 1 N N N N N N 17.502 3.867  8.571  5.019  -0.444 -1.038 C5  YDT 1  
YDT C6  C2  C 0 1 Y N N N N N 18.736 4.401  9.236  5.376  0.743  -0.176 C6  YDT 2  
YDT C7  C3  C 0 1 Y N N N N N 20.000 4.013  9.099  6.416  0.856  0.741  C7  YDT 3  
YDT N10 N1  N 0 1 Y N N N N N 19.954 5.758  10.512 5.286  2.742  0.693  N10 YDT 4  
YDT C11 C4  C 0 1 Y N N N N N 18.748 5.482  10.120 4.692  1.916  -0.186 C11 YDT 5  
YDT C12 C5  C 0 1 N N N N N N 17.504 6.187  10.466 3.485  2.195  -1.046 C12 YDT 6  
YDT C15 C6  C 0 1 Y N N N N N 14.241 2.038  7.679  0.245  -0.858 -0.091 C15 YDT 7  
YDT C16 C7  C 0 1 Y N N N N N 13.517 1.021  8.258  -0.084 -0.869 1.248  C16 YDT 8  
YDT C18 C8  C 0 1 N N N N N N 12.146 0.681  10.385 1.142  -1.351 3.406  C18 YDT 9  
YDT C19 C9  C 0 1 Y N N N N N 13.401 2.768  9.628  2.057  -1.423 1.070  C19 YDT 10 
YDT C21 C10 C 0 1 N N N N N N 13.306 -0.313 7.712  -1.400 -0.562 1.820  C21 YDT 11 
YDT C24 C11 C 0 1 N N N N N N 13.429 -1.971 5.900  -3.672 0.291  1.610  C24 YDT 12 
YDT C30 C12 C 0 1 Y N N N N N 11.901 -1.149 2.512  -6.323 0.238  -1.124 C30 YDT 13 
YDT C32 C13 C 0 1 Y N N N N N 9.908  -0.934 3.475  -6.637 -1.940 -0.844 C32 YDT 14 
YDT C33 C14 C 0 1 Y N N N N N 10.712 -1.259 4.493  -5.696 -1.619 0.055  C33 YDT 15 
YDT C34 C15 C 0 1 Y N N N N N 12.041 -1.413 3.887  -5.453 -0.180 -0.104 C34 YDT 16 
YDT O1  O1  O 0 1 N N N N N N 15.252 4.560  6.772  1.650  -1.002 -2.733 O1  YDT 17 
YDT S2  S1  S 0 1 N N N N N N 14.982 4.633  8.148  2.530  -1.348 -1.672 S2  YDT 18 
YDT O3  O2  O 0 1 N N N N N N 14.059 5.625  8.563  3.211  -2.593 -1.603 O3  YDT 19 
YDT N4  N2  N 0 1 N N N N N N 16.340 4.593  8.999  3.697  -0.174 -1.630 N4  YDT 20 
YDT N8  N3  N 0 1 Y N N N N N 20.784 4.816  9.879  6.366  2.056  1.266  N8  YDT 21 
YDT C13 C16 C 0 1 N N N N N N 16.354 5.212  10.264 3.438  1.165  -2.181 C13 YDT 22 
YDT C14 C17 C 0 1 Y N N N N N 14.164 3.130  8.529  1.595  -1.209 -0.185 C14 YDT 23 
YDT N17 N4  N 0 1 Y N N N N N 13.003 1.475  9.469  1.047  -1.219 1.950  N17 YDT 24 
YDT C20 C18 C 0 1 N N N N N N 13.000 3.608  10.824 3.465  -1.822 1.430  C20 YDT 25 
YDT O22 O3  O 0 1 N N N N N N 12.780 -1.125 8.418  -1.593 -0.706 3.013  O22 YDT 26 
YDT N23 N5  N 0 1 N N N N N N 13.671 -0.637 6.471  -2.394 -0.121 1.024  N23 YDT 27 
YDT C25 C19 C 0 1 Y N N N N N 13.280 -1.734 4.408  -4.605 0.738  0.514  C25 YDT 28 
YDT C26 C20 C 0 1 Y N N N N N 14.374 -1.771 3.577  -4.627 2.059  0.117  C26 YDT 29 
YDT F27 F1  F 0 1 N N N N N N 15.564 -2.077 4.123  -3.808 2.954  0.711  F27 YDT 30 
YDT C28 C21 C 0 1 Y N N N N N 14.245 -1.513 2.204  -5.487 2.471  -0.893 C28 YDT 31 
YDT C29 C22 C 0 1 Y N N N N N 13.011 -1.194 1.664  -6.329 1.572  -1.511 C29 YDT 32 
YDT O31 O4  O 0 1 Y N N N N N 10.598 -0.879 2.317  -7.010 -0.849 -1.535 O31 YDT 33 
YDT H1  H1  H 0 1 N N N N N N 17.381 2.806  8.833  5.761  -0.566 -1.827 H1  YDT 34 
YDT H2  H2  H 0 1 N N N N N N 17.608 3.966  7.481  4.975  -1.346 -0.427 H2  YDT 35 
YDT H3  H3  H 0 1 N N N N N N 20.348 3.201  8.477  7.138  0.088  0.979  H3  YDT 36 
YDT H4  H4  H 0 1 N N N N N N 20.235 6.489  11.135 5.015  3.651  0.895  H4  YDT 37 
YDT H5  H5  H 0 1 N N N N N N 17.538 6.515  11.515 2.580  2.114  -0.442 H5  YDT 38 
YDT H6  H6  H 0 1 N N N N N N 17.374 7.062  9.812  3.558  3.199  -1.463 H6  YDT 39 
YDT H7  H7  H 0 1 N N N N N N 14.770 1.994  6.739  -0.417 -0.627 -0.913 H7  YDT 40 
YDT H8  H8  H 0 1 N N N N N N 11.887 1.289  11.265 0.974  -2.390 3.689  H8  YDT 41 
YDT H9  H9  H 0 1 N N N N N N 11.226 0.384  9.861  2.134  -1.041 3.735  H9  YDT 42 
YDT H10 H10 H 0 1 N N N N N N 12.690 -0.219 10.708 0.389  -0.720 3.878  H10 YDT 43 
YDT H11 H11 H 0 1 N N N N N N 12.510 -2.410 6.316  -4.115 -0.549 2.144  H11 YDT 44 
YDT H12 H12 H 0 1 N N N N N N 14.279 -2.639 6.103  -3.505 1.115  2.303  H12 YDT 45 
YDT H13 H13 H 0 1 N N N N N N 8.849  -0.742 3.567  -7.043 -2.931 -0.986 H13 YDT 46 
YDT H14 H14 H 0 1 N N N N N N 10.443 -1.381 5.532  -5.214 -2.285 0.755  H14 YDT 47 
YDT H15 H15 H 0 1 N N N N N N 15.409 5.761  10.390 2.454  1.182  -2.649 H15 YDT 48 
YDT H16 H16 H 0 1 N N N N N N 16.427 4.428  11.032 4.200  1.406  -2.923 H16 YDT 49 
YDT H17 H17 H 0 1 N N N N N N 12.052 4.123  10.609 4.067  -0.927 1.589  H17 YDT 50 
YDT H18 H18 H 0 1 N N N N N N 12.873 2.958  11.702 3.452  -2.418 2.342  H18 YDT 51 
YDT H19 H19 H 0 1 N N N N N N 13.784 4.352  11.029 3.895  -2.409 0.618  H19 YDT 52 
YDT H20 H20 H 0 1 N N N N N N 14.126 0.052  5.908  -2.264 -0.077 0.064  H20 YDT 53 
YDT H21 H21 H 0 1 N N N N N N 15.114 -1.564 1.564  -5.497 3.508  -1.197 H21 YDT 54 
YDT H22 H22 H 0 1 N N N N N N 12.908 -0.984 0.610  -6.994 1.904  -2.295 H22 YDT 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YDT C29 C28 DOUB Y N 1  
YDT C29 C30 SING Y N 2  
YDT C28 C26 SING Y N 3  
YDT O31 C30 SING Y N 4  
YDT O31 C32 SING Y N 5  
YDT C30 C34 DOUB Y N 6  
YDT C32 C33 DOUB Y N 7  
YDT C26 F27 SING N N 8  
YDT C26 C25 DOUB Y N 9  
YDT C34 C25 SING Y N 10 
YDT C34 C33 SING Y N 11 
YDT C25 C24 SING N N 12 
YDT C24 N23 SING N N 13 
YDT N23 C21 SING N N 14 
YDT O1  S2  DOUB N N 15 
YDT C15 C16 DOUB Y N 16 
YDT C15 C14 SING Y N 17 
YDT C21 C16 SING N N 18 
YDT C21 O22 DOUB N N 19 
YDT S2  C14 SING N N 20 
YDT S2  O3  DOUB N N 21 
YDT S2  N4  SING N N 22 
YDT C16 N17 SING Y N 23 
YDT C14 C19 DOUB Y N 24 
YDT C5  N4  SING N N 25 
YDT C5  C6  SING N N 26 
YDT N4  C13 SING N N 27 
YDT C7  C6  SING Y N 28 
YDT C7  N8  DOUB Y N 29 
YDT C6  C11 DOUB Y N 30 
YDT N17 C19 SING Y N 31 
YDT N17 C18 SING N N 32 
YDT C19 C20 SING N N 33 
YDT N8  N10 SING Y N 34 
YDT C11 C12 SING N N 35 
YDT C11 N10 SING Y N 36 
YDT C13 C12 SING N N 37 
YDT C5  H1  SING N N 38 
YDT C5  H2  SING N N 39 
YDT C7  H3  SING N N 40 
YDT N10 H4  SING N N 41 
YDT C12 H5  SING N N 42 
YDT C12 H6  SING N N 43 
YDT C15 H7  SING N N 44 
YDT C18 H8  SING N N 45 
YDT C18 H9  SING N N 46 
YDT C18 H10 SING N N 47 
YDT C24 H11 SING N N 48 
YDT C24 H12 SING N N 49 
YDT C32 H13 SING N N 50 
YDT C33 H14 SING N N 51 
YDT C13 H15 SING N N 52 
YDT C13 H16 SING N N 53 
YDT C20 H17 SING N N 54 
YDT C20 H18 SING N N 55 
YDT C20 H19 SING N N 56 
YDT N23 H20 SING N N 57 
YDT C28 H21 SING N N 58 
YDT C29 H22 SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YDT InChI            InChI                1.06  "InChI=1S/C22H22FN5O4S/c1-13-21(33(30,31)28-7-5-18-14(12-28)10-25-26-18)9-19(27(13)2)22(29)24-11-16-15-6-8-32-20(15)4-3-17(16)23/h3-4,6,8-10H,5,7,11-12H2,1-2H3,(H,24,29)(H,25,26)" 
YDT InChIKey         InChI                1.06  YVXDXTXKLFZFOI-UHFFFAOYSA-N                                                                                                                                                         
YDT SMILES_CANONICAL CACTVS               3.385 "Cn1c(C)c(cc1C(=O)NCc2c(F)ccc3occc23)[S](=O)(=O)N4CCc5[nH]ncc5C4"                                                                                                                   
YDT SMILES           CACTVS               3.385 "Cn1c(C)c(cc1C(=O)NCc2c(F)ccc3occc23)[S](=O)(=O)N4CCc5[nH]ncc5C4"                                                                                                                   
YDT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cc(n1C)C(=O)NCc2c3ccoc3ccc2F)S(=O)(=O)N4CCc5c(cn[nH]5)C4"                                                                                                                     
YDT SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(cc(n1C)C(=O)NCc2c3ccoc3ccc2F)S(=O)(=O)N4CCc5c(cn[nH]5)C4"                                                                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           YDT 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(5-fluoranyl-1-benzofuran-4-yl)methyl]-1,5-dimethyl-4-(1,4,6,7-tetrahydropyrazolo[4,3-c]pyridin-5-ylsulfonyl)pyrrole-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YDT "Create component" 2023-12-03 PDBE 
YDT "Initial release"  2024-10-23 RCSB 
# 
