data_A1BAV
# 
_chem_comp.id                                    A1BAV 
_chem_comp.name                                  "4-{[(5-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}oxan-4-ol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H18 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-09-25 
_chem_comp.pdbx_modified_date                    2025-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        262.308 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1BAV 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7HF9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1BAV N2  N1  N 0 1 Y N N N N N 15.316 1.262  6.332  -3.833 1.641  0.241  N2  A1BAV 1  
A1BAV C3  C1  C 0 1 Y N N N N N 15.610 4.532  4.938  -3.884 -1.910 -0.027 C3  A1BAV 2  
A1BAV C6  C2  C 0 1 Y N N N N N 15.204 1.143  3.488  -1.308 0.666  -0.008 C6  A1BAV 3  
A1BAV C9  C3  C 0 1 N N N N N N 12.765 -0.027 0.616  3.606  1.307  -0.171 C9  A1BAV 4  
A1BAV C12 C4  C 0 1 N N N N N N 13.991 -2.094 0.193  2.519  -0.707 0.820  C12 A1BAV 5  
A1BAV C1  C5  C 0 1 N N N N N N 15.485 4.314  2.419  -1.467 -2.683 -0.253 C1  A1BAV 6  
A1BAV C10 C6  C 0 1 N N N N N N 11.497 -0.740 0.058  4.910  0.508  -0.242 C10 A1BAV 7  
A1BAV C11 C7  C 0 1 N N N N N N 12.699 -2.863 0.230  3.865  -1.428 0.710  C11 A1BAV 8  
A1BAV C13 C8  C 0 1 Y N N N N N 15.359 2.411  4.127  -2.401 -0.214 0.001  C13 A1BAV 9  
A1BAV C2  C9  C 0 1 Y N N N N N 15.496 3.767  3.775  -2.565 -1.663 -0.099 C2  A1BAV 10 
A1BAV C4  C10 C 0 1 Y N N N N N 15.407 2.380  5.550  -3.697 0.320  0.131  C4  A1BAV 11 
A1BAV C5  C11 C 0 1 Y N N N N N 15.179 0.138  5.613  -2.779 2.428  0.229  C5  A1BAV 12 
A1BAV C7  C12 C 0 1 N N N N N N 15.204 -0.253 1.389  1.112  1.125  -0.139 C7  A1BAV 13 
A1BAV C8  C13 C 0 1 N N N N N N 13.852 -0.964 1.192  2.420  0.345  -0.288 C8  A1BAV 14 
A1BAV N1  N2  N 0 1 Y N N N N N 15.565 3.667  6.041  -4.571 -0.732 0.111  N1  A1BAV 15 
A1BAV N3  N3  N 0 1 Y N N N N N 15.118 0.004  4.246  -1.546 1.969  0.108  N3  A1BAV 16 
A1BAV N4  N4  N 0 1 N N N N N N 15.146 1.013  2.114  -0.016 0.190  -0.133 N4  A1BAV 17 
A1BAV O1  O1  O 0 1 N N N N N N 13.374 -1.415 2.428  2.452  -0.299 -1.564 O1  A1BAV 18 
A1BAV O2  O2  O 0 1 N N N N N N 11.656 -2.105 -0.353 4.924  -0.473 0.797  O2  A1BAV 19 
A1BAV H4  H1  H 0 1 N N N N N N 15.715 5.606  4.981  -4.335 -2.890 -0.071 H4  A1BAV 20 
A1BAV H11 H2  H 0 1 N N N N N N 13.216 0.554  -0.202 3.554  1.835  0.782  H11 A1BAV 21 
A1BAV H12 H3  H 0 1 N N N N N N 12.446 0.656  1.417  3.574  2.027  -0.988 H12 A1BAV 22 
A1BAV H17 H4  H 0 1 N N N N N N 14.830 -2.748 0.474  1.709  -1.429 0.710  H17 A1BAV 23 
A1BAV H18 H5  H 0 1 N N N N N N 14.163 -1.690 -0.815 2.444  -0.220 1.792  H18 A1BAV 24 
A1BAV H3  H6  H 0 1 N N N N N N 14.452 4.554  2.128  -1.131 -3.007 0.732  H3  A1BAV 25 
A1BAV H1  H7  H 0 1 N N N N N N 16.096 5.228  2.388  -1.844 -3.541 -0.809 H1  A1BAV 26 
A1BAV H2  H8  H 0 1 N N N N N N 15.899 3.572  1.721  -0.631 -2.238 -0.793 H2  A1BAV 27 
A1BAV H13 H9  H 0 1 N N N N N N 11.149 -0.167 -0.814 4.981  0.014  -1.211 H13 A1BAV 28 
A1BAV H14 H10 H 0 1 N N N N N N 10.728 -0.716 0.844  5.757  1.183  -0.116 H14 A1BAV 29 
A1BAV H16 H11 H 0 1 N N N N N N 12.442 -3.089 1.275  3.958  -2.149 1.523  H16 A1BAV 30 
A1BAV H15 H12 H 0 1 N N N N N N 12.820 -3.802 -0.329 3.921  -1.949 -0.246 H15 A1BAV 31 
A1BAV H6  H13 H 0 1 N N N N N N 15.108 -0.778 6.180  -2.928 3.494  0.321  H6  A1BAV 32 
A1BAV H8  H14 H 0 1 N N N N N N 15.867 -0.932 1.945  1.127  1.683  0.797  H8  A1BAV 33 
A1BAV H9  H15 H 0 1 N N N N N N 15.632 -0.056 0.395  1.005  1.818  -0.974 H9  A1BAV 34 
A1BAV H5  H16 H 0 1 N N N N N N 15.634 3.930  7.003  -5.535 -0.655 0.182  H5  A1BAV 35 
A1BAV H7  H17 H 0 1 N N N N N N 15.908 1.557  1.762  0.144  -0.763 -0.216 H7  A1BAV 36 
A1BAV H10 H18 H 0 1 N N N N N N 13.300 -0.681 3.026  1.728  -0.924 -1.707 H10 A1BAV 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1BAV O2  C10 SING N N 1  
A1BAV O2  C11 SING N N 2  
A1BAV C10 C9  SING N N 3  
A1BAV C12 C11 SING N N 4  
A1BAV C12 C8  SING N N 5  
A1BAV C9  C8  SING N N 6  
A1BAV C8  C7  SING N N 7  
A1BAV C8  O1  SING N N 8  
A1BAV C7  N4  SING N N 9  
A1BAV N4  C6  SING N N 10 
A1BAV C1  C2  SING N N 11 
A1BAV C6  C13 DOUB Y N 12 
A1BAV C6  N3  SING Y N 13 
A1BAV C2  C13 SING Y N 14 
A1BAV C2  C3  DOUB Y N 15 
A1BAV C13 C4  SING Y N 16 
A1BAV N3  C5  DOUB Y N 17 
A1BAV C3  N1  SING Y N 18 
A1BAV C4  N1  SING Y N 19 
A1BAV C4  N2  DOUB Y N 20 
A1BAV C5  N2  SING Y N 21 
A1BAV C3  H4  SING N N 22 
A1BAV C9  H11 SING N N 23 
A1BAV C9  H12 SING N N 24 
A1BAV C12 H17 SING N N 25 
A1BAV C12 H18 SING N N 26 
A1BAV C1  H3  SING N N 27 
A1BAV C1  H1  SING N N 28 
A1BAV C1  H2  SING N N 29 
A1BAV C10 H13 SING N N 30 
A1BAV C10 H14 SING N N 31 
A1BAV C11 H16 SING N N 32 
A1BAV C11 H15 SING N N 33 
A1BAV C5  H6  SING N N 34 
A1BAV C7  H8  SING N N 35 
A1BAV C7  H9  SING N N 36 
A1BAV N1  H5  SING N N 37 
A1BAV N4  H7  SING N N 38 
A1BAV O1  H10 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1BAV SMILES           ACDLabs              14.52   "OC1(CNc2ncnc3[NH]cc(C)c32)CCOCC1"                                                                                   
A1BAV InChI            InChI                1.06    "InChI=1S/C13H18N4O2/c1-9-6-14-11-10(9)12(17-8-16-11)15-7-13(18)2-4-19-5-3-13/h6,8,18H,2-5,7H2,1H3,(H2,14,15,16,17)" 
A1BAV InChIKey         InChI                1.06    IBPXIYCBLMCNDD-UHFFFAOYSA-N                                                                                          
A1BAV SMILES_CANONICAL CACTVS               3.385   "Cc1c[nH]c2ncnc(NCC3(O)CCOCC3)c12"                                                                                   
A1BAV SMILES           CACTVS               3.385   "Cc1c[nH]c2ncnc(NCC3(O)CCOCC3)c12"                                                                                   
A1BAV SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c[nH]c2c1c(ncn2)NCC3(CCOCC3)O"                                                                                   
A1BAV SMILES           "OpenEye OEToolkits" 3.1.0.0 "Cc1c[nH]c2c1c(ncn2)NCC3(CCOCC3)O"                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1BAV "SYSTEMATIC NAME" ACDLabs              14.52   "4-{[(5-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}oxan-4-ol"    
A1BAV "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[[(5-methyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl]oxan-4-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1BAV "Create component" 2024-09-25 RCSB 
A1BAV "Initial release"  2025-06-11 RCSB 
# 
