data_XNV
#

_chem_comp.id                                   XNV
_chem_comp.name                                 "ethyl (4R)-4-({(2S)-2-[3-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-2-oxopyridin-1(2H)-yl]pent-4-ynoyl}amino)-5-[(3S)-2-oxopyrrolidin-3-yl]pentanoate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H31 N5 O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "AG7404, bound form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-01-14
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       525.554
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XNV
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3Q3Y
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XNV  C01   C01   C  0  1  N  N  N  -18.394  28.585  -26.546    8.253  -4.585  -0.378  C01   XNV   1  
XNV  C02   C02   C  0  1  N  N  N  -17.267  27.538  -26.646    7.877  -3.330   0.412  C02   XNV   2  
XNV  O03   O03   O  0  1  N  N  N  -17.660  26.367  -27.382    6.626  -2.796  -0.097  O03   XNV   3  
XNV  C04   C04   C  0  1  N  N  N  -16.988  25.194  -27.114    6.153  -1.686   0.493  C04   XNV   4  
XNV  C05   C05   C  0  1  N  N  N  -17.751  24.011  -27.696    4.860  -1.074   0.019  C05   XNV   5  
XNV  C06   C06   C  0  1  N  N  N  -18.263  22.912  -26.720    4.550   0.171   0.852  C06   XNV   6  
XNV  C07   C07   C  0  1  N  N  R  -19.506  23.383  -25.904    3.237   0.793   0.371  C07   XNV   7  
XNV  N08   N08   N  0  1  N  N  N  -20.678  23.385  -26.770    2.133  -0.134   0.633  N08   XNV   8  
XNV  C09   C09   C  0  1  N  N  N  -21.480  24.493  -26.881    1.037  -0.114  -0.150  C09   XNV   9  
XNV  C10   C10   C  0  1  N  N  S  -22.633  24.392  -27.890   -0.145  -0.987   0.186  C10   XNV  10  
XNV  N11   N11   N  0  1  N  N  N  -23.815  25.122  -27.414   -1.200  -0.784  -0.810  N11   XNV  11  
XNV  C12   C12   C  0  1  N  N  N  -24.543  24.462  -26.374   -2.408  -0.334  -0.418  C12   XNV  12  
XNV  C13   C13   C  0  1  N  N  N  -25.778  25.081  -25.899   -3.430  -0.137  -1.372  C13   XNV  13  
XNV  N14   N14   N  0  1  N  N  N  -26.534  24.325  -24.990   -4.689   0.331  -0.976  N14   XNV  14  
XNV  C15   C15   C  0  1  N  N  N  -27.910  24.074  -25.202   -5.414  -0.365  -0.079  C15   XNV  15  
XNV  C16   C16   C  0  1  Y  N  N  -28.478  23.085  -24.235   -6.790   0.071   0.261  C16   XNV  16  
XNV  N17   N17   N  0  1  Y  N  N  -27.796  22.487  -23.263   -7.433   1.102  -0.229  N17   XNV  17  
XNV  O18   O18   O  0  1  Y  N  N  -28.653  21.663  -22.631   -8.541   1.199   0.244  O18   XNV  18  
XNV  C19   C19   C  0  1  Y  N  N  -29.908  21.746  -23.140   -8.790   0.225   1.132  C19   XNV  19  
XNV  C20   C20   C  0  1  N  N  N  -31.052  20.972  -22.612  -10.061   0.028   1.917  C20   XNV  20  
XNV  C21   C21   C  0  1  Y  N  N  -29.852  22.642  -24.184   -7.681  -0.549   1.181  C21   XNV  21  
XNV  O22   O22   O  0  1  N  N  N  -28.595  24.610  -26.068   -4.941  -1.351   0.452  O22   XNV  22  
XNV  C23   C23   C  0  1  N  N  N  -26.149  26.316  -26.397   -3.175  -0.408  -2.689  C23   XNV  23  
XNV  C24   C24   C  0  1  N  N  N  -25.360  26.936  -27.397   -1.906  -0.875  -3.059  C24   XNV  24  
XNV  C25   C25   C  0  1  N  N  N  -24.229  26.355  -27.869   -0.948  -1.048  -2.119  C25   XNV  25  
XNV  O26   O26   O  0  1  N  N  N  -24.113  23.383  -25.944   -2.618  -0.098   0.761  O26   XNV  26  
XNV  C27   C27   C  0  1  N  N  N  -22.164  24.848  -29.275    0.287  -2.454   0.180  C27   XNV  27  
XNV  C28   C28   C  0  1  N  N  N  -23.250  24.625  -30.208   -0.835  -3.297   0.625  C28   XNV  28  
XNV  C29   C29   C  0  1  N  N  N  -24.125  24.445  -30.969   -1.730  -3.970   0.979  C29   XNV  29  
XNV  O30   O30   O  0  1  N  N  N  -21.309  25.517  -26.239    1.001   0.606  -1.125  O30   XNV  30  
XNV  C31   C31   C  0  1  N  N  N  -19.754  22.521  -24.640    2.991   2.105   1.118  C31   XNV  31  
XNV  C32   C32   C  0  1  N  N  S  -20.900  22.961  -23.756    4.063   3.124   0.728  C32   XNV  32  
XNV  C33   C33   C  0  1  N  N  N  -20.652  24.328  -23.049    3.933   4.403   1.587  C33   XNV  33  
XNV  C34   C34   C  0  1  N  N  N  -21.488  24.259  -21.784    4.296   5.505   0.567  C34   XNV  34  
XNV  N35   N35   N  0  1  N  N  N  -21.424  22.828  -21.489    3.976   4.942  -0.749  N35   XNV  35  
XNV  C36   C36   C  0  1  N  N  N  -21.130  22.063  -22.581    3.845   3.605  -0.690  C36   XNV  36  
XNV  O37   O37   O  0  1  N  N  N  -21.110  20.844  -22.622    3.590   2.889  -1.635  O37   XNV  37  
XNV  O38   O38   O  0  1  N  N  N  -16.295  25.146  -26.125    6.764  -1.179   1.403  O38   XNV  38  
XNV  H10   H10   H  0  1  N  N  N  -22.941  23.340  -27.984   -0.522  -0.723   1.174  H10   XNV  39  
XNV  H20   H20   H  0  1  N  N  N  -31.833  21.664  -22.264  -10.774   0.810   1.657  H20   XNV  40  
XNV  H20A  H20A  H  0  0  N  N  N  -31.458  20.330  -23.407  -10.488  -0.946   1.678  H20A  XNV  41  
XNV  H20B  H20B  H  0  0  N  N  N  -30.716  20.347  -21.772   -9.841   0.077   2.983  H20B  XNV  42  
XNV  H01   H01   H  0  1  N  N  N  -18.687  28.905  -27.557    7.468  -5.333  -0.269  H01   XNV  43  
XNV  H21   H21   H  0  1  N  N  N  -30.663  22.948  -24.828   -7.512  -1.431   1.781  H21   XNV  44  
XNV  H31   H31   H  0  1  N  N  N  -19.973  21.497  -24.978    2.007   2.494   0.854  H31   XNV  45  
XNV  H01A  H01A  H  0  0  N  N  N  -19.262  28.142  -26.035    8.369  -4.331  -1.432  H01A  XNV  46  
XNV  H31A  H31A  H  0  0  N  N  N  -18.838  22.557  -24.033    3.034   1.925   2.192  H31A  XNV  47  
XNV  H01B  H01B  H  0  0  N  N  N  -18.037  29.455  -25.975    9.192  -4.987   0.003  H01B  XNV  48  
XNV  H02   H02   H  0  1  N  N  N  -16.988  27.230  -25.628    7.761  -3.585   1.465  H02   XNV  49  
XNV  H32   H32   H  0  1  N  N  N  -21.735  22.976  -24.472    5.057   2.690   0.837  H32   XNV  50  
XNV  H02A  H02A  H  0  0  N  N  N  -16.410  27.999  -27.159    8.662  -2.583   0.302  H02A  XNV  51  
XNV  H23   H23   H  0  1  N  N  N  -27.037  26.806  -26.025   -3.943  -0.264  -3.435  H23   XNV  52  
XNV  H33   H33   H  0  1  N  N  N  -19.586  24.466  -22.814    2.913   4.527   1.950  H33   XNV  53  
XNV  H33A  H33A  H  0  0  N  N  N  -20.965  25.168  -23.687    4.641   4.390   2.416  H33A  XNV  54  
XNV  HN14  HN14  H  0  0  N  N  N  -26.090  23.955  -24.174   -5.038   1.156  -1.347  HN14  XNV  55  
XNV  H24   H24   H  0  1  N  N  N  -25.666  27.893  -27.793   -1.691  -1.093  -4.095  H24   XNV  56  
XNV  H34   H34   H  0  1  N  N  N  -21.073  24.874  -20.972    3.700   6.399   0.750  H34   XNV  57  
XNV  H34A  H34A  H  0  0  N  N  N  -22.519  24.610  -21.942    5.359   5.741   0.629  H34A  XNV  58  
XNV  H05   H05   H  0  1  N  N  N  -17.070  23.513  -28.402    4.953  -0.795  -1.031  H05   XNV  59  
XNV  H25   H25   H  0  1  N  N  N  -23.642  26.869  -28.616    0.029  -1.403  -2.413  H25   XNV  60  
XNV  HN35  HN35  H  0  0  N  N  N  -21.580  22.447  -20.578    3.873   5.466  -1.559  HN35  XNV  61  
XNV  H05A  H05A  H  0  0  N  N  N  -18.638  24.425  -28.198    4.052  -1.797   0.132  H05A  XNV  62  
XNV  H06   H06   H  0  1  N  N  N  -18.544  22.025  -27.307    4.457  -0.108   1.902  H06   XNV  63  
XNV  H07   H07   H  0  1  N  N  N  -19.307  24.403  -25.544    3.300   0.990  -0.699  H07   XNV  64  
XNV  H27   H27   H  0  1  N  N  N  -21.902  25.916  -29.251    0.581  -2.743  -0.829  H27   XNV  65  
XNV  H27A  H27A  H  0  0  N  N  N  -21.280  24.270  -29.582    1.131  -2.587   0.857  H27A  XNV  66  
XNV  HN08  HN08  H  0  0  N  N  N  -20.902  22.563  -27.294    2.191  -0.761   1.370  HN08  XNV  67  
XNV  H29   H29   H  0  1  N  N  N  -24.915  24.282  -31.656   -2.530  -4.571   1.296  H29   XNV  68  
XNV  H06A  H06A  H  0  0  N  N  N  -17.455  22.664  -26.016    5.358   0.894   0.739  H06A  XNV  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XNV  H01B  C01   SING  N  N   1  
XNV  C02   C01   SING  N  N   2  
XNV  H01   C01   SING  N  N   3  
XNV  C01   H01A  SING  N  N   4  
XNV  O03   C02   SING  N  N   5  
XNV  H02A  C02   SING  N  N   6  
XNV  C02   H02   SING  N  N   7  
XNV  O03   C04   SING  N  N   8  
XNV  C05   C04   SING  N  N   9  
XNV  C04   O38   DOUB  N  N  10  
XNV  H05A  C05   SING  N  N  11  
XNV  H05   C05   SING  N  N  12  
XNV  C05   C06   SING  N  N  13  
XNV  C06   H06   SING  N  N  14  
XNV  C06   C07   SING  N  N  15  
XNV  C06   H06A  SING  N  N  16  
XNV  N08   C07   SING  N  N  17  
XNV  C07   H07   SING  N  N  18  
XNV  C07   C31   SING  N  N  19  
XNV  HN08  N08   SING  N  N  20  
XNV  C09   N08   SING  N  N  21  
XNV  C10   C09   SING  N  N  22  
XNV  C09   O30   DOUB  N  N  23  
XNV  C27   C10   SING  N  N  24  
XNV  H10   C10   SING  N  N  25  
XNV  C10   N11   SING  N  N  26  
XNV  C25   N11   SING  N  N  27  
XNV  N11   C12   SING  N  N  28  
XNV  C12   O26   DOUB  N  N  29  
XNV  C12   C13   SING  N  N  30  
XNV  C23   C13   DOUB  N  N  31  
XNV  C13   N14   SING  N  N  32  
XNV  C15   N14   SING  N  N  33  
XNV  N14   HN14  SING  N  N  34  
XNV  O22   C15   DOUB  N  N  35  
XNV  C15   C16   SING  N  N  36  
XNV  C16   C21   SING  Y  N  37  
XNV  C16   N17   DOUB  Y  N  38  
XNV  N17   O18   SING  Y  N  39  
XNV  C19   O18   SING  Y  N  40  
XNV  C21   C19   DOUB  Y  N  41  
XNV  C19   C20   SING  N  N  42  
XNV  H20B  C20   SING  N  N  43  
XNV  C20   H20   SING  N  N  44  
XNV  C20   H20A  SING  N  N  45  
XNV  H21   C21   SING  N  N  46  
XNV  C24   C23   SING  N  N  47  
XNV  C23   H23   SING  N  N  48  
XNV  C25   C24   DOUB  N  N  49  
XNV  H24   C24   SING  N  N  50  
XNV  H25   C25   SING  N  N  51  
XNV  C28   C27   SING  N  N  52  
XNV  H27   C27   SING  N  N  53  
XNV  C27   H27A  SING  N  N  54  
XNV  C29   C28   TRIP  N  N  55  
XNV  H29   C29   SING  N  N  56  
XNV  H31   C31   SING  N  N  57  
XNV  C31   H31A  SING  N  N  58  
XNV  C31   C32   SING  N  N  59  
XNV  H32   C32   SING  N  N  60  
XNV  C32   C33   SING  N  N  61  
XNV  C32   C36   SING  N  N  62  
XNV  H33   C33   SING  N  N  63  
XNV  C33   H33A  SING  N  N  64  
XNV  C33   C34   SING  N  N  65  
XNV  H34   C34   SING  N  N  66  
XNV  C34   N35   SING  N  N  67  
XNV  C34   H34A  SING  N  N  68  
XNV  C36   N35   SING  N  N  69  
XNV  N35   HN35  SING  N  N  70  
XNV  O37   C36   DOUB  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XNV  SMILES            ACDLabs               12.01  "O=C(NC1=CC=CN(C1=O)C(C(=O)NC(CC2C(=O)NCC2)CCC(=O)OCC)CC#C)c3noc(c3)C"  
XNV  InChI             InChI                 1.03   "InChI=1S/C26H31N5O7/c1-4-7-21(31-13-6-8-19(26(31)36)29-24(34)20-14-16(3)38-30-20)25(35)28-18(9-10-22(32)37-5-2)15-17-11-12-27-23(17)33/h1,6,8,13-14,17-18,21H,5,7,9-12,15H2,2-3H3,(H,27,33)(H,28,35)(H,29,34)/t17-,18+,21-/m0/s1"  
XNV  InChIKey          InChI                 1.03   WVFVHUYBPRBKRA-UEXGIBASSA-N  
XNV  SMILES_CANONICAL  CACTVS                3.370  "CCOC(=O)CC[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC#C)N2C=CC=C(NC(=O)c3cc(C)on3)C2=O"  
XNV  SMILES            CACTVS                3.370  "CCOC(=O)CC[CH](C[CH]1CCNC1=O)NC(=O)[CH](CC#C)N2C=CC=C(NC(=O)c3cc(C)on3)C2=O"  
XNV  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "CCOC(=O)CC[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC#C)N2C=CC=C(C2=O)NC(=O)c3cc(on3)C"  
XNV  SMILES            "OpenEye OEToolkits"  1.7.2  "CCOC(=O)CCC(CC1CCNC1=O)NC(=O)C(CC#C)N2C=CC=C(C2=O)NC(=O)c3cc(on3)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XNV  "SYSTEMATIC NAME"  ACDLabs               12.01  "ethyl (4R)-4-({(2S)-2-[3-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-2-oxopyridin-1(2H)-yl]pent-4-ynoyl}amino)-5-[(3S)-2-oxopyrrolidin-3-yl]pentanoate"  
XNV  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "ethyl (4R)-4-[[(2S)-2-[3-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]-2-oxidanylidene-pyridin-1-yl]pent-4-ynoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XNV  "Create component"      2011-01-14  RCSB  
XNV  "Modify aromatic_flag"  2011-06-04  RCSB  
XNV  "Modify descriptor"     2011-06-04  RCSB  
XNV  "Modify synonyms"       2011-08-29  RCSB  
XNV  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     XNV
_pdbx_chem_comp_synonyms.name        "AG7404, bound form"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
