data_A1BOX
# 
_chem_comp.id                                    A1BOX 
_chem_comp.name                                  "(3S)-1-{[3-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H20 N2 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2025-01-10 
_chem_comp.pdbx_modified_date                    2025-02-21 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        292.397 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1BOX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7HY4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1BOX N1  N1  N 0 1 N N N N N N 23.795 13.802 15.078 4.800  2.487  -0.692 N1  A1BOX 1  
A1BOX C4  C1  C 0 1 Y N N N N N 25.263 10.087 9.303  -2.136 -0.971 -1.682 C4  A1BOX 2  
A1BOX C5  C2  C 0 1 Y N N N N N 25.831 11.165 8.643  -1.823 -0.905 -0.336 C5  A1BOX 3  
A1BOX C6  C3  C 0 1 N N N N N N 25.295 12.550 8.839  -0.483 -1.395 0.149  C6  A1BOX 4  
A1BOX C7  C4  C 0 1 N N N N N N 25.749 13.085 10.180 0.508  -0.259 0.121  C7  A1BOX 5  
A1BOX C8  C5  C 0 1 N N N N N N 24.003 14.854 9.884  2.217  -1.790 0.975  C8  A1BOX 6  
A1BOX C10 C6  C 0 1 N N N N N N 22.773 15.070 12.067 4.520  -1.124 0.275  C10 A1BOX 7  
A1BOX C13 C7  C 0 1 N N N N N N 25.245 14.615 12.001 2.757  0.632  0.492  C13 A1BOX 8  
A1BOX O1  O1  O 0 1 N N N N N N 24.531 15.862 14.508 6.134  0.982  0.244  O1  A1BOX 9  
A1BOX C12 C8  C 0 1 N N N N N N 24.099 14.742 14.196 5.050  1.245  -0.232 C12 A1BOX 10 
A1BOX C11 C9  C 0 1 N N S N N N 23.941 14.339 12.742 3.983  0.184  -0.310 C11 A1BOX 11 
A1BOX C9  C10 C 0 1 N N N N N N 22.663 14.682 10.592 3.448  -2.211 0.167  C9  A1BOX 12 
A1BOX N   N2  N 0 1 N N N N N N 25.077 14.166 10.619 1.780  -0.465 0.515  N   A1BOX 13 
A1BOX O   O2  O 0 1 N N N N N N 26.641 12.544 10.828 0.160  0.840  -0.257 O   A1BOX 14 
A1BOX C3  C11 C 0 1 Y N N N N N 25.721 8.810  9.074  -3.362 -0.517 -2.133 C3  A1BOX 15 
A1BOX C2  C12 C 0 1 Y N N N N N 26.759 8.594  8.186  -4.278 0.004  -1.240 C2  A1BOX 16 
A1BOX C14 C13 C 0 1 Y N N N N N 26.869 10.944 7.751  -2.736 -0.390 0.563  C14 A1BOX 17 
A1BOX C1  C14 C 0 1 Y N N N N N 27.327 9.664  7.512  -3.967 0.072  0.112  C1  A1BOX 18 
A1BOX S   S1  S 0 1 N N N N N N 28.582 9.404  6.305  -5.132 0.736  1.255  S   A1BOX 19 
A1BOX C   C15 C 0 1 N N N N N N 29.059 11.052 5.787  -6.537 1.176  0.195  C   A1BOX 20 
A1BOX H15 H1  H 0 1 N N N N N N 23.910 13.978 16.056 5.487  3.170  -0.642 H15 A1BOX 21 
A1BOX H16 H2  H 0 1 N N N N N N 23.450 12.917 14.766 3.935  2.697  -1.077 H16 A1BOX 22 
A1BOX H6  H3  H 0 1 N N N N N N 24.456 10.250 10.002 -1.420 -1.374 -2.382 H6  A1BOX 23 
A1BOX H7  H4  H 0 1 N N N N N N 25.670 13.204 8.038  -0.580 -1.767 1.169  H7  A1BOX 24 
A1BOX H8  H5  H 0 1 N N N N N N 24.196 12.525 8.808  -0.133 -2.198 -0.499 H8  A1BOX 25 
A1BOX H9  H6  H 0 1 N N N N N N 24.241 15.926 9.818  1.415  -2.513 0.821  H9  A1BOX 26 
A1BOX H10 H7  H 0 1 N N N N N N 23.932 14.432 8.871  2.471  -1.747 2.033  H10 A1BOX 27 
A1BOX H13 H8  H 0 1 N N N N N N 22.936 16.155 12.142 5.407  -1.432 -0.278 H13 A1BOX 28 
A1BOX H14 H9  H 0 1 N N N N N N 21.837 14.803 12.580 4.780  -0.974 1.323  H14 A1BOX 29 
A1BOX H17 H10 H 0 1 N N N N N N 25.466 15.692 12.020 3.057  0.876  1.512  H17 A1BOX 30 
A1BOX H18 H11 H 0 1 N N N N N N 26.070 14.063 12.476 2.314  1.510  0.022  H18 A1BOX 31 
A1BOX H   H12 H 0 1 N N N N N N 23.741 13.258 12.700 3.700  0.028  -1.351 H   A1BOX 32 
A1BOX H11 H13 H 0 1 N N N N N N 21.913 15.323 10.106 3.840  -3.149 0.563  H11 A1BOX 33 
A1BOX H12 H14 H 0 1 N N N N N N 22.349 13.630 10.518 3.170  -2.345 -0.878 H12 A1BOX 34 
A1BOX H5  H15 H 0 1 N N N N N N 25.269 7.975  9.589  -3.603 -0.570 -3.184 H5  A1BOX 35 
A1BOX H4  H16 H 0 1 N N N N N N 27.127 7.593  8.018  -5.235 0.359  -1.593 H4  A1BOX 36 
A1BOX H19 H17 H 0 1 N N N N N N 27.323 11.780 7.239  -2.490 -0.339 1.613  H19 A1BOX 37 
A1BOX H2  H18 H 0 1 N N N N N N 29.849 10.983 5.024  -7.332 1.604  0.805  H2  A1BOX 38 
A1BOX H3  H19 H 0 1 N N N N N N 28.186 11.571 5.365  -6.217 1.906  -0.549 H3  A1BOX 39 
A1BOX H1  H20 H 0 1 N N N N N N 29.435 11.614 6.654  -6.906 0.283  -0.308 H1  A1BOX 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1BOX C   S   SING N N 1  
A1BOX S   C1  SING N N 2  
A1BOX C1  C2  DOUB Y N 3  
A1BOX C2  C3  SING Y N 4  
A1BOX C3  C4  DOUB Y N 5  
A1BOX C4  C5  SING Y N 6  
A1BOX C5  C6  SING N N 7  
A1BOX C6  C7  SING N N 8  
A1BOX O   C7  DOUB N N 9  
A1BOX C7  N   SING N N 10 
A1BOX N   C8  SING N N 11 
A1BOX C8  C9  SING N N 12 
A1BOX C9  C10 SING N N 13 
A1BOX C10 C11 SING N N 14 
A1BOX C11 C12 SING N N 15 
A1BOX N1  C12 SING N N 16 
A1BOX C12 O1  DOUB N N 17 
A1BOX C13 C11 SING N N 18 
A1BOX N   C13 SING N N 19 
A1BOX C14 C5  DOUB Y N 20 
A1BOX C1  C14 SING Y N 21 
A1BOX N1  H15 SING N N 22 
A1BOX N1  H16 SING N N 23 
A1BOX C4  H6  SING N N 24 
A1BOX C6  H7  SING N N 25 
A1BOX C6  H8  SING N N 26 
A1BOX C8  H9  SING N N 27 
A1BOX C8  H10 SING N N 28 
A1BOX C10 H13 SING N N 29 
A1BOX C10 H14 SING N N 30 
A1BOX C13 H17 SING N N 31 
A1BOX C13 H18 SING N N 32 
A1BOX C11 H   SING N N 33 
A1BOX C9  H11 SING N N 34 
A1BOX C9  H12 SING N N 35 
A1BOX C3  H5  SING N N 36 
A1BOX C2  H4  SING N N 37 
A1BOX C14 H19 SING N N 38 
A1BOX C   H2  SING N N 39 
A1BOX C   H3  SING N N 40 
A1BOX C   H1  SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1BOX SMILES           ACDLabs              14.52   "O=C(Cc1cccc(SC)c1)N1CCCC(C1)C(N)=O"                                                                                                 
A1BOX InChI            InChI                1.06    "InChI=1S/C15H20N2O2S/c1-20-13-6-2-4-11(8-13)9-14(18)17-7-3-5-12(10-17)15(16)19/h2,4,6,8,12H,3,5,7,9-10H2,1H3,(H2,16,19)/t12-/m0/s1" 
A1BOX InChIKey         InChI                1.06    YEEQWHOUTZRGAB-LBPRGKRZSA-N                                                                                                          
A1BOX SMILES_CANONICAL CACTVS               3.385   "CSc1cccc(CC(=O)N2CCC[C@@H](C2)C(N)=O)c1"                                                                                            
A1BOX SMILES           CACTVS               3.385   "CSc1cccc(CC(=O)N2CCC[CH](C2)C(N)=O)c1"                                                                                              
A1BOX SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1cccc(c1)CC(=O)N2CCC[C@@H](C2)C(=O)N"                                                                                            
A1BOX SMILES           "OpenEye OEToolkits" 3.1.0.0 "CSc1cccc(c1)CC(=O)N2CCCC(C2)C(=O)N"                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1BOX "SYSTEMATIC NAME" ACDLabs              14.52   "(3S)-1-{[3-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide"      
A1BOX "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(3-methylsulfanylphenyl)ethanoyl]piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1BOX "Create component" 2025-01-10 RCSB 
A1BOX "Initial release"  2025-02-26 RCSB 
# 
