data_A1IXZ
# 
_chem_comp.id                                    A1IXZ 
_chem_comp.name                                  "(3~{S})-3-(1,3-benzodioxol-5-yl)-3-[7-[2-[[(1~{R})-cyclohex-2-en-1-yl]amino]-2-oxidanylidene-ethoxy]naphthalen-2-yl]propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H27 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2025-01-07 
_chem_comp.pdbx_modified_date                    2025-08-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        473.517 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1IXZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9HWV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1IXZ C1   C1  C 0 1 N N N N N N 39.929 21.854 5.178  5.456  -0.488 -0.128 C1   A1IXZ 1  
A1IXZ C2   C2  C 0 1 N N R N N N 41.425 22.505 7.033  7.842  -0.939 -0.324 C2   A1IXZ 2  
A1IXZ C4   C3  C 0 1 N N N N N N 42.809 23.907 8.504  9.675  0.572  -1.003 C4   A1IXZ 3  
A1IXZ C5   C4  C 0 1 N N N N N N 43.496 22.652 9.027  10.749 -0.312 -0.441 C5   A1IXZ 4  
A1IXZ O6   O1  O 0 1 N N N N N N 37.701 17.869 14.310 -2.852 3.278  -1.467 O6   A1IXZ 5  
A1IXZ C7   C5  C 0 1 N N N N N N 41.494 21.330 8.080  8.883  -1.597 0.583  C7   A1IXZ 6  
A1IXZ C9   C6  C 0 1 Y N N N N N 38.400 19.504 5.129  1.905  0.230  0.418  C9   A1IXZ 7  
A1IXZ C11  C7  C 0 1 Y N N N N N 38.647 18.428 7.330  -0.454 0.609  0.254  C11  A1IXZ 8  
A1IXZ C13  C8  C 0 1 Y N N N N N 38.883 17.250 9.478  -2.811 0.990  0.116  C13  A1IXZ 9  
A1IXZ C15  C9  C 0 1 Y N N N N N 40.384 17.905 11.299 -4.993 -0.072 -0.296 C15  A1IXZ 10 
A1IXZ C16  C10 C 0 1 Y N N N N N 41.526 17.257 10.802 -5.569 -0.082 0.961  C16  A1IXZ 11 
A1IXZ C19  C11 C 0 1 N N N N N N 43.612 20.895 12.537 -7.676 -3.712 -0.795 C19  A1IXZ 12 
A1IXZ C21  C12 C 0 1 Y N N N N N 40.522 19.136 11.991 -5.257 -1.094 -1.189 C21  A1IXZ 13 
A1IXZ C22  C13 C 0 1 N N N N N N 37.853 17.546 11.915 -4.779 2.395  -0.437 C22  A1IXZ 14 
A1IXZ C23  C14 C 0 1 N N N N N N 38.164 17.219 13.383 -3.917 3.520  -0.949 C23  A1IXZ 15 
A1IXZ C24  C15 C 0 1 Y N N N N N 38.823 16.045 8.798  -2.856 1.252  1.484  C24  A1IXZ 16 
A1IXZ C25  C16 C 0 1 Y N N N N N 38.691 15.993 7.426  -1.729 1.199  2.245  C25  A1IXZ 17 
A1IXZ C26  C17 C 0 1 Y N N N N N 38.595 17.157 6.675  -0.500 0.875  1.646  C26  A1IXZ 18 
A1IXZ C27  C18 C 0 1 Y N N N N N 38.441 17.071 5.273  0.683  0.804  2.402  C27  A1IXZ 19 
A1IXZ C10  C19 C 0 1 Y N N N N N 38.545 19.599 6.529  0.774  0.284  -0.346 C10  A1IXZ 20 
A1IXZ C12  C20 C 0 1 Y N N N N N 38.796 18.456 8.748  -1.639 0.674  -0.499 C12  A1IXZ 21 
A1IXZ C14  C21 C 0 1 N N S N N N 39.057 17.196 11.018 -4.079 1.059  -0.695 C14  A1IXZ 22 
A1IXZ C17  C22 C 0 1 Y N N N N N 42.800 17.800 10.990 -6.411 -1.114 1.330  C17  A1IXZ 23 
A1IXZ C18  C23 C 0 1 Y N N N N N 42.907 18.993 11.678 -6.681 -2.141 0.440  C18  A1IXZ 24 
A1IXZ C20  C24 C 0 1 Y N N N N N 41.810 19.651 12.160 -6.100 -2.131 -0.826 C20  A1IXZ 25 
A1IXZ C28  C25 C 0 1 Y N N N N N 38.354 18.237 4.536  1.856  0.487  1.791  C28  A1IXZ 26 
A1IXZ C3   C26 C 0 1 N N N N N N 41.716 23.811 7.724  8.410  0.302  -0.948 C3   A1IXZ 27 
A1IXZ C6   C27 C 0 1 N N N N N N 42.382 21.609 9.322  10.199 -1.719 -0.196 C6   A1IXZ 28 
A1IXZ C8   C28 C 0 1 N N N N N N 38.535 21.906 4.581  4.240  -0.126 0.686  C8   A1IXZ 29 
A1IXZ N1   N1  N 0 1 N N N N N N 40.153 22.487 6.341  6.661  -0.587 0.467  N1   A1IXZ 30 
A1IXZ O1   O2  O 0 1 N N N N N N 40.763 21.243 4.577  5.348  -0.695 -1.318 O1   A1IXZ 31 
A1IXZ O2   O3  O 0 1 N N N N N N 38.280 20.529 4.214  3.092  -0.084 -0.164 O2   A1IXZ 32 
A1IXZ O3   O4  O 0 1 N N N N N N 44.032 19.692 11.958 -7.461 -3.255 0.553  O3   A1IXZ 33 
A1IXZ O4   O5  O 0 1 N N N N N N 42.223 20.790 12.781 -6.517 -3.239 -1.506 O4   A1IXZ 34 
A1IXZ O5   O6  O 0 1 N N N N N N 38.968 16.151 13.562 -4.331 4.791  -0.829 O5   A1IXZ 35 
A1IXZ HC2  H1  H 0 1 N N N N N N 42.225 22.328 6.299  7.553  -1.638 -1.109 HC2  A1IXZ 36 
A1IXZ HC4  H2  H 0 1 N N N N N N 43.201 24.880 8.761  9.976  1.492  -1.483 HC4  A1IXZ 37 
A1IXZ H52  H3  H 0 0 N N N N N N 44.190 22.259 8.270  11.579 -0.366 -1.146 H5_2 A1IXZ 38 
A1IXZ H51  H4  H 0 0 N N N N N N 44.051 22.882 9.949  11.104 0.105  0.501  H5_1 A1IXZ 39 
A1IXZ H72  H5  H 0 0 N N N N N N 40.472 21.125 8.431  9.038  -0.981 1.469  H7_2 A1IXZ 40 
A1IXZ H71  H6  H 0 0 N N N N N N 41.892 20.441 7.569  8.537  -2.586 0.881  H7_1 A1IXZ 41 
A1IXZ HC16 H7  H 0 0 N N N N N N 41.418 16.325 10.267 -5.360 0.718  1.655  HC16 A1IXZ 42 
A1IXZ H191 H8  H 0 0 N N N N N N 44.147 21.063 13.483 -7.727 -4.801 -0.827 H191 A1IXZ 43 
A1IXZ H192 H9  H 0 0 N N N N N N 43.810 21.731 11.850 -8.585 -3.273 -1.208 H192 A1IXZ 44 
A1IXZ HC21 H10 H 0 0 N N N N N N 39.658 19.659 12.375 -4.806 -1.083 -2.170 HC21 A1IXZ 45 
A1IXZ H222 H11 H 0 0 N N N N N N 37.632 18.620 11.822 -4.940 2.519  0.634  H222 A1IXZ 46 
A1IXZ H221 H12 H 0 0 N N N N N N 36.979 16.962 11.591 -5.738 2.408  -0.953 H221 A1IXZ 47 
A1IXZ HC24 H13 H 0 0 N N N N N N 38.881 15.122 9.356  -3.799 1.500  1.947  HC24 A1IXZ 48 
A1IXZ HC25 H14 H 0 0 N N N N N N 38.662 15.034 6.929  -1.779 1.404  3.304  HC25 A1IXZ 49 
A1IXZ HC27 H15 H 0 0 N N N N N N 38.392 16.109 4.785  0.661  1.005  3.463  HC27 A1IXZ 50 
A1IXZ HC10 H16 H 0 0 N N N N N N 38.579 20.571 6.998  0.823  0.079  -1.405 HC10 A1IXZ 51 
A1IXZ HC12 H17 H 0 0 N N N N N N 38.842 19.403 9.266  -1.619 0.473  -1.560 HC12 A1IXZ 52 
A1IXZ HC14 H18 H 0 0 N N N N N N 39.259 16.136 11.232 -3.838 0.974  -1.755 HC14 A1IXZ 53 
A1IXZ HC17 H19 H 0 0 N N N N N N 43.678 17.300 10.607 -6.860 -1.119 2.312  HC17 A1IXZ 54 
A1IXZ HC28 H20 H 0 0 N N N N N N 38.247 18.168 3.464  2.763  0.433  2.376  HC28 A1IXZ 55 
A1IXZ HC3  H21 H 0 1 N N N N N N 41.058 24.658 7.596  7.721  1.014  -1.379 HC3  A1IXZ 56 
A1IXZ H61  H22 H 0 0 N N N N N N 42.854 20.667 9.639  10.014 -2.211 -1.151 H6_1 A1IXZ 57 
A1IXZ H62  H23 H 0 0 N N N N N N 41.745 21.991 10.134 10.917 -2.297 0.385  H6_2 A1IXZ 58 
A1IXZ H82  H24 H 0 0 N N N N N N 37.802 22.259 5.321  4.089  -0.873 1.465  H8_2 A1IXZ 59 
A1IXZ H81  H25 H 0 0 N N N N N N 38.509 22.561 3.698  4.388  0.852  1.145  H8_1 A1IXZ 60 
A1IXZ HN1  H26 H 0 1 N N N N N N 39.389 22.980 6.758  6.746  -0.425 1.420  HN1  A1IXZ 61 
A1IXZ H1   H27 H 0 1 N N N N N N 39.100 16.006 14.491 -3.744 5.478  -1.172 H1   A1IXZ 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1IXZ C1  C8   SING N N 1  
A1IXZ C1  N1   SING N N 2  
A1IXZ C1  O1   DOUB N N 3  
A1IXZ C10 C11  DOUB Y N 4  
A1IXZ C10 C9   SING Y N 5  
A1IXZ C11 C12  SING Y N 6  
A1IXZ C11 C26  SING Y N 7  
A1IXZ C12 C13  DOUB Y N 8  
A1IXZ C13 C14  SING N N 9  
A1IXZ C13 C24  SING Y N 10 
A1IXZ C14 C15  SING N N 11 
A1IXZ C14 C22  SING N N 12 
A1IXZ C15 C16  DOUB Y N 13 
A1IXZ C15 C21  SING Y N 14 
A1IXZ C16 C17  SING Y N 15 
A1IXZ C17 C18  DOUB Y N 16 
A1IXZ C18 C20  SING Y N 17 
A1IXZ C18 O3   SING N N 18 
A1IXZ C19 O3   SING N N 19 
A1IXZ C19 O4   SING N N 20 
A1IXZ C2  C3   SING N N 21 
A1IXZ C2  C7   SING N N 22 
A1IXZ C2  N1   SING N N 23 
A1IXZ C20 C21  DOUB Y N 24 
A1IXZ C20 O4   SING N N 25 
A1IXZ C22 C23  SING N N 26 
A1IXZ C23 O5   SING N N 27 
A1IXZ C23 O6   DOUB N N 28 
A1IXZ C24 C25  DOUB Y N 29 
A1IXZ C25 C26  SING Y N 30 
A1IXZ C26 C27  DOUB Y N 31 
A1IXZ C27 C28  SING Y N 32 
A1IXZ C28 C9   DOUB Y N 33 
A1IXZ C3  C4   DOUB N N 34 
A1IXZ C4  C5   SING N N 35 
A1IXZ C5  C6   SING N N 36 
A1IXZ C6  C7   SING N N 37 
A1IXZ C8  O2   SING N N 38 
A1IXZ C9  O2   SING N N 39 
A1IXZ C2  HC2  SING N N 40 
A1IXZ C4  HC4  SING N N 41 
A1IXZ C5  H52  SING N N 42 
A1IXZ C5  H51  SING N N 43 
A1IXZ C7  H72  SING N N 44 
A1IXZ C7  H71  SING N N 45 
A1IXZ C16 HC16 SING N N 46 
A1IXZ C19 H191 SING N N 47 
A1IXZ C19 H192 SING N N 48 
A1IXZ C21 HC21 SING N N 49 
A1IXZ C22 H222 SING N N 50 
A1IXZ C22 H221 SING N N 51 
A1IXZ C24 HC24 SING N N 52 
A1IXZ C25 HC25 SING N N 53 
A1IXZ C27 HC27 SING N N 54 
A1IXZ C10 HC10 SING N N 55 
A1IXZ C12 HC12 SING N N 56 
A1IXZ C14 HC14 SING N N 57 
A1IXZ C17 HC17 SING N N 58 
A1IXZ C28 HC28 SING N N 59 
A1IXZ C3  HC3  SING N N 60 
A1IXZ C6  H61  SING N N 61 
A1IXZ C6  H62  SING N N 62 
A1IXZ C8  H82  SING N N 63 
A1IXZ C8  H81  SING N N 64 
A1IXZ N1  HN1  SING N N 65 
A1IXZ O5  H1   SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1IXZ InChI            InChI                1.06  "InChI=1S/C28H27NO6/c30-27(29-22-4-2-1-3-5-22)16-33-23-10-8-18-6-7-19(12-21(18)13-23)24(15-28(31)32)20-9-11-25-26(14-20)35-17-34-25/h2,4,6-14,22,24H,1,3,5,15-17H2,(H,29,30)(H,31,32)/t22-,24-/m0/s1" 
A1IXZ InChIKey         InChI                1.06  ZRNMFRDXSKOSDV-UPVQGACJSA-N                                                                                                                                                                           
A1IXZ SMILES_CANONICAL CACTVS               3.385 "OC(=O)C[C@H](c1ccc2OCOc2c1)c3ccc4ccc(OCC(=O)N[C@@H]5CCCC=C5)cc4c3"                                                                                                                                   
A1IXZ SMILES           CACTVS               3.385 "OC(=O)C[CH](c1ccc2OCOc2c1)c3ccc4ccc(OCC(=O)N[CH]5CCCC=C5)cc4c3"                                                                                                                                      
A1IXZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc2c1ccc(c2)OCC(=O)N[C@@H]3CCCC=C3)[C@H](CC(=O)O)c4ccc5c(c4)OCO5"                                                                                                                               
A1IXZ SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(cc2c1ccc(c2)OCC(=O)NC3CCCC=C3)C(CC(=O)O)c4ccc5c(c4)OCO5"                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           A1IXZ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(3~{S})-3-(1,3-benzodioxol-5-yl)-3-[7-[2-[[(1~{R})-cyclohex-2-en-1-yl]amino]-2-oxidanylidene-ethoxy]naphthalen-2-yl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1IXZ "Create component" 2025-01-07 PDBE 
A1IXZ "Initial release"  2025-09-03 RCSB 
# 
