data_YGZ
# 
_chem_comp.id                                    YGZ 
_chem_comp.name                                  "({[(3aS,4R,7S,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methoxy}carbonyl)sulfamic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H17 N7 O7 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-12-04 
_chem_comp.pdbx_modified_date                    2025-05-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        379.350 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YGZ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8V66 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YGZ O11 O1  O 0 1 N N N N N N 12.059 52.603 -9.185  -2.423 2.345  1.337  O11 YGZ 1  
YGZ C01 C1  C 0 1 N N N N N N 9.674  52.096 -9.073  -1.472 2.257  -0.923 C01 YGZ 2  
YGZ C02 C2  C 0 1 N N N N N N 9.372  50.746 -8.307  -1.525 1.114  -1.975 C02 YGZ 3  
YGZ C04 C3  C 0 1 N N N N N N 11.134 49.248 -7.213  -1.545 -1.387 -1.367 C04 YGZ 4  
YGZ C06 C4  C 0 1 N N R N N N 13.095 50.271 -6.294  -0.950 -1.114 0.934  C06 YGZ 5  
YGZ C07 C5  C 0 1 N N S N N N 12.488 51.674 -6.291  -2.205 -0.298 1.223  C07 YGZ 6  
YGZ C08 C6  C 0 1 N N S N N N 11.168 51.684 -7.177  -2.719 0.373  -0.055 C08 YGZ 7  
YGZ C09 C7  C 0 1 N N N N N N 10.955 52.657 -8.335  -2.668 1.898  0.002  C09 YGZ 8  
YGZ C13 C8  C 0 1 N N N N N N 10.804 52.076 -4.817  -4.312 -1.026 0.822  C13 YGZ 9  
YGZ C16 C9  C 0 1 N N N N N N 13.903 50.283 -7.615  0.225  -0.158 0.720  C16 YGZ 10 
YGZ C18 C10 C 0 1 N N N N N N 14.919 51.710 -9.182  2.584  -0.227 0.363  C18 YGZ 11 
YGZ N03 N1  N 0 1 N N N N N N 10.603 50.484 -7.598  -1.897 -0.065 -1.193 N03 YGZ 12 
YGZ N05 N2  N 0 1 N N N N N N 12.222 49.131 -6.531  -1.100 -1.956 -0.257 N05 YGZ 13 
YGZ N12 N3  N 0 1 N N N N N N 10.176 51.953 -6.080  -4.091 -0.124 -0.186 N12 YGZ 14 
YGZ N14 N4  N 0 1 N N N N N N 12.122 52.008 -4.883  -3.310 -1.177 1.629  N14 YGZ 15 
YGZ N15 N5  N 0 1 N N N N N N 10.113 52.302 -3.643  -5.495 -1.713 0.963  N15 YGZ 16 
YGZ N20 N6  N 0 1 N N N N N N 15.645 52.845 -9.419  3.755  -0.877 0.208  N20 YGZ 17 
YGZ N25 N7  N 0 1 N N N N N N 10.327 48.136 -7.604  -1.646 -2.047 -2.568 N25 YGZ 18 
YGZ O10 O2  O 0 1 N N N N N N 10.775 53.902 -7.769  -3.881 2.464  -0.501 O10 YGZ 19 
YGZ O17 O3  O 0 1 N N N N N N 14.711 51.435 -7.832  1.449  -0.923 0.561  O17 YGZ 20 
YGZ O19 O4  O 0 1 N N N N N N 14.484 50.966 -10.038 2.553  0.987  0.323  O19 YGZ 21 
YGZ O22 O5  O 0 1 N N N N N N 15.249 53.614 -11.719 4.870  0.922  -1.061 O22 YGZ 22 
YGZ O23 O6  O 0 1 N N N N N N 17.187 54.428 -10.504 5.412  0.785  1.229  O23 YGZ 23 
YGZ O24 O7  O 0 1 N N N N N N 17.120 52.177 -11.458 6.198  -0.977 -0.126 O24 YGZ 24 
YGZ S21 S1  S 0 1 N N N N N N 16.407 53.311 -10.926 5.151  -0.021 -0.036 S21 YGZ 25 
YGZ H1  H1  H 0 1 N N N N N N 12.823 52.942 -8.734  -2.314 3.302  1.418  H1  YGZ 26 
YGZ H2  H2  H 0 1 N N N N N N 8.830  52.796 -8.984  -0.533 2.235  -0.371 H2  YGZ 27 
YGZ H3  H3  H 0 1 N N N N N N 9.883  51.907 -10.136 -1.622 3.228  -1.395 H3  YGZ 28 
YGZ H4  H4  H 0 1 N N N N N N 8.533  50.869 -7.607  -2.280 1.325  -2.732 H4  YGZ 29 
YGZ H5  H5  H 0 1 N N N N N N 9.144  49.934 -9.014  -0.548 0.974  -2.438 H5  YGZ 30 
YGZ H6  H6  H 0 1 N N N N N N 13.757 50.120 -5.428  -0.736 -1.750 1.793  H6  YGZ 31 
YGZ H7  H7  H 0 1 N N N N N N 13.207 52.403 -6.693  -2.005 0.442  1.998  H7  YGZ 32 
YGZ H8  H8  H 0 1 N N N N N N 13.189 50.208 -8.449  0.051  0.438  -0.176 H8  YGZ 33 
YGZ H9  H9  H 0 1 N N N N N N 14.562 49.402 -7.616  0.319  0.502  1.583  H9  YGZ 34 
YGZ H10 H10 H 0 1 N N N N N N 9.190  52.035 -6.225  -4.730 0.140  -0.867 H10 YGZ 35 
YGZ H11 H11 H 0 1 N N N N N N 10.612 52.424 -2.785  -6.219 -1.567 0.333  H11 YGZ 36 
YGZ H12 H12 H 0 1 N N N N N N 9.114  52.344 -3.651  -5.606 -2.342 1.692  H12 YGZ 37 
YGZ H13 H13 H 0 1 N N N N N N 15.752 53.476 -8.650  3.779  -1.846 0.240  H13 YGZ 38 
YGZ H14 H14 H 0 1 N N N N N N 10.597 47.208 -7.348  -1.384 -2.979 -2.634 H14 YGZ 39 
YGZ H15 H15 H 0 1 N N N N N N 9.492  48.286 -8.133  -1.979 -1.581 -3.351 H15 YGZ 40 
YGZ H16 H16 H 0 1 N N N N N N 10.013 53.885 -7.201  -3.886 3.431  -0.519 H16 YGZ 41 
YGZ H17 H17 H 0 1 N N N N N N 16.796 55.230 -10.831 6.213  1.327  1.191  H17 YGZ 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YGZ O22 S21 DOUB N N 1  
YGZ O24 S21 DOUB N N 2  
YGZ S21 O23 SING N N 3  
YGZ S21 N20 SING N N 4  
YGZ O19 C18 DOUB N N 5  
YGZ N20 C18 SING N N 6  
YGZ O11 C09 SING N N 7  
YGZ C18 O17 SING N N 8  
YGZ C01 C09 SING N N 9  
YGZ C01 C02 SING N N 10 
YGZ C09 O10 SING N N 11 
YGZ C09 C08 SING N N 12 
YGZ C02 N03 SING N N 13 
YGZ O17 C16 SING N N 14 
YGZ C16 C06 SING N N 15 
YGZ N25 C04 SING N N 16 
YGZ N03 C04 SING N N 17 
YGZ N03 C08 SING N N 18 
YGZ C04 N05 DOUB N N 19 
YGZ C08 C07 SING N N 20 
YGZ C08 N12 SING N N 21 
YGZ N05 C06 SING N N 22 
YGZ C06 C07 SING N N 23 
YGZ C07 N14 SING N N 24 
YGZ N12 C13 SING N N 25 
YGZ N14 C13 DOUB N N 26 
YGZ C13 N15 SING N N 27 
YGZ O11 H1  SING N N 28 
YGZ C01 H2  SING N N 29 
YGZ C01 H3  SING N N 30 
YGZ C02 H4  SING N N 31 
YGZ C02 H5  SING N N 32 
YGZ C06 H6  SING N N 33 
YGZ C07 H7  SING N N 34 
YGZ C16 H8  SING N N 35 
YGZ C16 H9  SING N N 36 
YGZ N12 H10 SING N N 37 
YGZ N15 H11 SING N N 38 
YGZ N15 H12 SING N N 39 
YGZ N20 H13 SING N N 40 
YGZ N25 H14 SING N N 41 
YGZ N25 H15 SING N N 42 
YGZ O10 H16 SING N N 43 
YGZ O23 H17 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YGZ SMILES           ACDLabs              12.01 "O=S(=O)(O)NC(=O)OCC1N=C(N)N2CCC(O)(O)C32NC(N)=NC13"                                                                                                                             
YGZ InChI            InChI                1.06  "InChI=1S/C10H17N7O7S/c11-6-14-5-4(3-24-8(18)16-25(21,22)23)13-7(12)17-2-1-9(19,20)10(5,17)15-6/h4-5,19-20H,1-3H2,(H2,12,13)(H,16,18)(H3,11,14,15)(H,21,22,23)/t4-,5-,10-/m0/s1" 
YGZ InChIKey         InChI                1.06  JKKCSFJSULZNDN-HGRQIUPRSA-N                                                                                                                                                      
YGZ SMILES_CANONICAL CACTVS               3.385 "NC1=N[C@H]2[C@H](COC(=O)N[S](O)(=O)=O)N=C(N)N3CCC(O)(O)[C@]23N1"                                                                                                                
YGZ SMILES           CACTVS               3.385 "NC1=N[CH]2[CH](COC(=O)N[S](O)(=O)=O)N=C(N)N3CCC(O)(O)[C]23N1"                                                                                                                   
YGZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1CN2C(=N[C@H]([C@H]3[C@]2(C1(O)O)NC(=N3)N)COC(=O)NS(=O)(=O)O)N"                                                                                                                
YGZ SMILES           "OpenEye OEToolkits" 2.0.7 "C1CN2C(=NC(C3C2(C1(O)O)NC(=N3)N)COC(=O)NS(=O)(=O)O)N"                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YGZ "SYSTEMATIC NAME" ACDLabs              12.01 "({[(3aS,4R,7S,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methoxy}carbonyl)sulfamic acid"                   
YGZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{a}~{S},4~{R},10~{a}~{S})-2,6-bis(azanyl)-10,10-bis(oxidanyl)-3~{a},4,8,9-tetrahydro-1~{H}-pyrrolo[1,2-c]purin-4-yl]methoxycarbonylsulfamic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YGZ "Create component" 2023-12-04 RCSB 
YGZ "Initial release"  2025-05-07 RCSB 
# 
