30.19
18.445
34.684
90.776
A
O5'
DC
1
ATOM
A
O5'
DC
1
1
1.00
1
O
27.48
18.939
34.713
89.428
A
C5'
DC
1
ATOM
A
C5'
DC
1
1
1.00
1
C
26.24
20.086
33.755
89.286
A
C4'
DC
1
ATOM
A
C4'
DC
1
1
1.00
1
C
25.39
19.617
32.539
89.905
A
O4'
DC
1
ATOM
A
O4'
DC
1
1
1.00
1
O
25.73
20.434
33.382
87.819
A
C3'
DC
1
ATOM
A
C3'
DC
1
1
1.00
1
C
27.53
21.831
32.949
87.719
A
O3'
DC
1
ATOM
A
O3'
DC
1
1
1.00
1
O
25.04
19.488
32.196
87.629
A
C2'
DC
1
ATOM
A
C2'
DC
1
1
1.00
1
C
23.43
19.521
31.485
88.974
A
C1'
DC
1
ATOM
A
C1'
DC
1
1
1.00
1
C
20.98
18.313
30.732
89.375
A
N1
DC
1
ATOM
A
N1
DC
1
1
1.00
1
N
19.06
18.488
29.453
89.907
A
C2
DC
1
ATOM
A
C2
DC
1
1
1.00
1
C
18.36
19.588
28.922
90.079
A
O2
DC
1
ATOM
A
O2
DC
1
1
1.00
1
O
17.81
17.394
28.756
90.259
A
N3
DC
1
ATOM
A
N3
DC
1
1
1.00
1
N
17.67
16.190
29.278
90.099
A
C4
DC
1
ATOM
A
C4
DC
1
1
1.00
1
C
16.84
15.153
28.546
90.456
A
N4
DC
1
ATOM
A
N4
DC
1
1
1.00
1
N
17.71
15.982
30.585
89.565
A
C5
DC
1
ATOM
A
C5
DC
1
1
1.00
1
C
19.32
17.075
31.279
89.212
A
C6
DC
1
ATOM
A
C6
DC
1
1
1.00
1
C
28.09
22.636
32.521
86.331
A
P
DG
2
ATOM
A
P
DG
1
2
1.00
1
P
26.65
23.988
33.128
86.291
A
OP1
DG
2
ATOM
A
OP1
DG
1
2
1.00
1
O
29.37
21.650
32.715
85.235
A
OP2
DG
2
ATOM
A
OP2
DG
1
2
1.00
1
O
25.86
22.776
30.956
86.326
A
O5'
DG
2
ATOM
A
O5'
DG
1
2
1.00
1
O
22.26
23.239
30.276
87.446
A
C5'
DG
2
ATOM
A
C5'
DG
1
2
1.00
1
C
20.17
23.441
28.853
87.109
A
C4'
DG
2
ATOM
A
C4'
DG
1
2
1.00
1
C
18.89
22.221
28.177
87.390
A
O4'
DG
2
ATOM
A
O4'
DG
1
2
1.00
1
O
19.94
23.649
28.619
85.571
A
C3'
DG
2
ATOM
A
C3'
DG
1
2
1.00
1
C
20.97
24.497
27.474
85.326
A
O3'
DG
2
ATOM
A
O3'
DG
1
2
1.00
1
O
18.60
22.244
28.333
85.091
A
C2'
DG
2
ATOM
A
C2'
DG
1
2
1.00
1
C
17.88
21.634
27.584
86.246
A
C1'
DG
2
ATOM
A
C1'
DG
1
2
1.00
1
C
15.72
20.190
27.715
86.370
A
N9
DG
2
ATOM
A
N9
DG
1
2
1.00
1
N
15.30
19.426
28.771
86.044
A
C8
DG
2
ATOM
A
C8
DG
1
2
1.00
1
C
15.53
18.152
28.589
86.275
A
N7
DG
2
ATOM
A
N7
DG
1
2
1.00
1
N
13.96
18.076
27.315
86.793
A
C5
DG
2
ATOM
A
C5
DG
1
2
1.00
1
C
12.91
16.952
26.601
87.227
A
C6
DG
2
ATOM
A
C6
DG
1
2
1.00
1
C
11.90
15.792
26.987
87.206
A
O6
DG
2
ATOM
A
O6
DG
1
2
1.00
1
O
12.95
17.285
25.328
87.709
A
N1
DG
2
ATOM
A
N1
DG
1
2
1.00
1
N
12.34
18.560
24.818
87.757
A
C2
DG
2
ATOM
A
C2
DG
1
2
1.00
1
C
10.54
18.725
23.599
88.240
A
N2
DG
2
ATOM
A
N2
DG
1
2
1.00
1
N
13.75
19.622
25.512
87.333
A
N3
DG
2
ATOM
A
N3
DG
1
2
1.00
1
N
14.61
19.318
26.753
86.864
A
C4
DG
2
ATOM
A
C4
DG
1
2
1.00
1
C
21.82
25.039
26.933
83.906
A
P
DC
3
ATOM
A
P
DC
1
3
1.00
1
P
21.65
26.503
26.649
84.021
A
OP1
DC
3
ATOM
A
OP1
DC
1
3
1.00
1
O
21.57
24.554
27.812
82.828
A
OP2
DC
3
ATOM
A
OP2
DC
1
3
1.00
1
O
20.59
24.232
25.558
83.811
A
O5'
DC
3
ATOM
A
O5'
DC
1
3
1.00
1
O
20.67
24.582
24.572
84.701
A
C5'
DC
3
ATOM
A
C5'
DC
1
3
1.00
1
C
20.70
23.738
23.337
84.770
A
C4'
DC
3
ATOM
A
C4'
DC
1
3
1.00
1
C
18.94
22.381
23.651
85.090
A
O4'
DC
3
ATOM
A
O4'
DC
1
3
1.00
1
O
21.83
23.658
22.748
83.424
A
C3'
DC
3
ATOM
A
C3'
DC
1
3
1.00
1
C
24.82
23.916
21.344
83.459
A
O3'
DC
3
ATOM
A
O3'
DC
1
3
1.00
1
O
20.85
22.296
23.136
82.953
A
C2'
DC
3
ATOM
A
C2'
DC
1
3
1.00
1
C
18.05
21.431
23.234
84.160
A
C1'
DC
3
ATOM
A
C1'
DC
1
3
1.00
1
C
17.98
20.335
24.218
83.915
A
N1
DC
3
ATOM
A
N1
DC
1
3
1.00
1
N
17.17
19.036
23.957
84.285
A
C2
DC
3
ATOM
A
C2
DC
1
3
1.00
1
C
18.66
18.673
22.971
84.886
A
O2
DC
3
ATOM
A
O2
DC
1
3
1.00
1
O
16.33
18.070
24.834
84.011
A
N3
DC
3
ATOM
A
N3
DC
1
3
1.00
1
N
16.82
18.311
25.990
83.405
A
C4
DC
3
ATOM
A
C4
DC
1
3
1.00
1
C
18.46
17.272
26.850
83.181
A
N4
DC
3
ATOM
A
N4
DC
1
3
1.00
1
N
16.65
19.644
26.304
83.011
A
C5
DC
3
ATOM
A
C5
DC
1
3
1.00
1
C
17.51
20.605
25.405
83.286
A
C6
DC
3
ATOM
A
C6
DC
1
3
1.00
1
C
26.70
24.166
20.520
82.047
A
P
DA
4
ATOM
A
P
DA
1
4
1.00
1
P
26.85
25.194
19.466
82.226
A
OP1
DA
4
ATOM
A
OP1
DA
1
4
1.00
1
O
26.47
24.135
21.416
80.854
A
OP2
DA
4
ATOM
A
OP2
DA
1
4
1.00
1
O
25.72
22.746
19.875
82.125
A
O5'
DA
4
ATOM
A
O5'
DA
1
4
1.00
1
O
23.18
22.492
19.128
83.296
A
C5'
DA
4
ATOM
A
C5'
DA
1
4
1.00
1
C
22.43
21.398
18.214
83.053
A
C4'
DA
4
ATOM
A
C4'
DA
1
4
1.00
1
C
21.44
20.188
18.955
82.994
A
O4'
DA
4
ATOM
A
O4'
DA
1
4
1.00
1
O
21.90
21.489
17.580
81.693
A
C3'
DA
4
ATOM
A
C3'
DA
1
4
1.00
1
C
23.94
20.978
16.294
82.013
A
O3'
DA
4
ATOM
A
O3'
DA
1
4
1.00
1
O
20.02
20.670
18.534
80.788
A
C2'
DA
4
ATOM
A
C2'
DA
1
4
1.00
1
C
18.53
19.581
19.062
81.715
A
C1'
DA
4
ATOM
A
C1'
DA
1
4
1.00
1
C
14.05
19.204
20.464
81.414
A
N9
DA
4
ATOM
A
N9
DA
1
4
1.00
1
N
14.30
19.917
21.436
80.750
A
C8
DA
4
ATOM
A
C8
DA
1
4
1.00
1
C
12.40
19.298
22.593
80.605
A
N7
DA
4
ATOM
A
N7
DA
1
4
1.00
1
N
10.58
18.081
22.368
81.218
A
C5
DA
4
ATOM
A
C5
DA
1
4
1.00
1
C
10.80
16.980
23.191
81.390
A
C6
DA
4
ATOM
A
C6
DA
1
4
1.00
1
C
11.79
16.951
24.459
80.949
A
N6
DA
4
ATOM
A
N6
DA
1
4
1.00
1
N
9.88
15.938
22.681
82.022
A
N1
DA
4
ATOM
A
N1
DA
1
4
1.00
1
N
9.72
16.016
21.429
82.440
A
C2
DA
4
ATOM
A
C2
DA
1
4
1.00
1
C
10.30
16.983
20.548
82.342
A
N3
DA
4
ATOM
A
N3
DA
1
4
1.00
1
N
12.22
18.017
21.093
81.707
A
C4
DA
4
ATOM
A
C4
DA
1
4
1.00
1
C
26.13
20.648
15.223
80.926
A
P
DA
5
ATOM
A
P
DA
1
5
1.00
1
P
26.39
21.071
13.909
81.429
A
OP1
DA
5
ATOM
A
OP1
DA
1
5
1.00
1
O
26.43
21.087
15.708
79.563
A
OP2
DA
5
ATOM
A
OP2
DA
1
5
1.00
1
O
25.62
19.064
15.343
80.965
A
O5'
DA
5
ATOM
A
O5'
DA
1
5
1.00
1
O
23.72
18.271
15.076
82.119
A
C5'
DA
5
ATOM
A
C5'
DA
1
5
1.00
1
C
21.00
16.762
15.307
81.904
A
C4'
DA
5
ATOM
A
C4'
DA
1
5
1.00
1
C
19.33
16.465
16.659
81.536
A
O4'
DA
5
ATOM
A
O4'
DA
1
5
1.00
1
O
20.63
16.299
14.489
80.710
A
C3'
DA
5
ATOM
A
C3'
DA
1
5
1.00
1
C
22.90
14.945
14.255
80.989
A
O3'
DA
5
ATOM
A
O3'
DA
1
5
1.00
1
O
18.14
16.494
15.422
79.523
A
C2'
DA
5
ATOM
A
C2'
DA
1
5
1.00
1
C
16.32
16.014
16.684
80.157
A
C1'
DA
5
ATOM
A
C1'
DA
1
5
1.00
1
C
12.85
16.491
17.909
79.535
A
N9
DA
5
ATOM
A
N9
DA
1
5
1.00
1
N
11.61
17.688
18.186
79.010
A
C8
DA
5
ATOM
A
C8
DA
1
5
1.00
1
C
12.11
17.782
19.390
78.544
A
N7
DA
5
ATOM
A
N7
DA
1
5
1.00
1
N
11.87
16.537
19.954
78.779
A
C5
DA
5
ATOM
A
C5
DA
1
5
1.00
1
C
11.86
15.999
21.224
78.506
A
C6
DA
5
ATOM
A
C6
DA
1
5
1.00
1
C
14.18
16.715
22.179
77.895
A
N6
DA
5
ATOM
A
N6
DA
1
5
1.00
1
N
10.76
14.737
21.477
78.867
A
N1
DA
5
ATOM
A
N1
DA
1
5
1.00
1
N
10.55
14.065
20.489
79.467
A
C2
DA
5
ATOM
A
C2
DA
1
5
1.00
1
C
10.74
14.459
19.268
79.771
A
N3
DA
5
ATOM
A
N3
DA
1
5
1.00
1
N
11.90
15.733
19.055
79.392
A
C4
DA
5
ATOM
A
C4
DA
1
5
1.00
1
C
24.57
14.095
13.215
80.115
A
P
DA
6
ATOM
A
P
DA
1
6
1.00
1
P
25.38
13.340
12.346
81.045
A
OP1
DA
6
ATOM
A
OP1
DA
1
6
1.00
1
O
24.71
14.944
12.637
79.050
A
OP2
DA
6
ATOM
A
OP2
DA
1
6
1.00
1
O
24.49
13.065
14.208
79.443
A
O5'
DA
6
ATOM
A
O5'
DA
1
6
1.00
1
O
21.83
12.127
14.866
80.277
A
C5'
DA
6
ATOM
A
C5'
DA
1
6
1.00
1
C
19.55
11.093
15.742
79.592
A
C4'
DA
6
ATOM
A
C4'
DA
1
6
1.00
1
C
18.84
11.706
16.877
78.975
A
O4'
DA
6
ATOM
A
O4'
DA
1
6
1.00
1
O
19.76
10.455
15.009
78.431
A
C3'
DA
6
ATOM
A
C3'
DA
1
6
1.00
1
C
20.00
9.057
15.380
78.395
A
O3'
DA
6
ATOM
A
O3'
DA
1
6
1.00
1
O
17.58
11.286
15.487
77.241
A
C2'
DA
6
ATOM
A
C2'
DA
1
6
1.00
1
C
16.25
11.577
16.921
77.537
A
C1'
DA
6
ATOM
A
C1'
DA
1
6
1.00
1
C
14.31
12.835
17.443
76.952
A
N9
DA
6
ATOM
A
N9
DA
1
6
1.00
1
N
13.14
14.054
16.854
76.741
A
C8
DA
6
ATOM
A
C8
DA
1
6
1.00
1
C
11.78
14.948
17.677
76.187
A
N7
DA
6
ATOM
A
N7
DA
1
6
1.00
1
N
10.16
14.298
18.874
76.024
A
C5
DA
6
ATOM
A
C5
DA
1
6
1.00
1
C
9.85
14.705
20.114
75.503
A
C6
DA
6
ATOM
A
C6
DA
1
6
1.00
1
C
9.91
15.924
20.400
75.002
A
N6
DA
6
ATOM
A
N6
DA
1
6
1.00
1
N
8.93
13.808
21.080
75.497
A
N1
DA
6
ATOM
A
N1
DA
1
6
1.00
1
N
11.76
12.618
20.784
75.975
A
C2
DA
6
ATOM
A
C2
DA
1
6
1.00
1
C
13.72
12.081
19.672
76.496
A
N3
DA
6
ATOM
A
N3
DA
1
6
1.00
1
N
12.79
13.016
18.733
76.487
A
C4
DA
6
ATOM
A
C4
DA
1
6
1.00
1
C
21.05
8.097
14.824
77.271
A
P
DT
7
ATOM
A
P
DT
1
7
1.00
1
P
21.58
6.709
14.840
77.788
A
OP1
DT
7
ATOM
A
OP1
DT
1
7
1.00
1
O
19.99
8.696
13.588
76.731
A
OP2
DT
7
ATOM
A
OP2
DT
1
7
1.00
1
O
21.05
8.189
15.980
76.152
A
O5'
DT
7
ATOM
A
O5'
DT
1
7
1.00
1
O
18.81
7.430
17.139
76.305
A
C5'
DT
7
ATOM
A
C5'
DT
1
7
1.00
1
C
18.47
7.583
18.219
75.273
A
C4'
DT
7
ATOM
A
C4'
DT
1
7
1.00
1
C
18.49
8.958
18.681
75.102
A
O4'
DT
7
ATOM
A
O4'
DT
1
7
1.00
1
O
19.28
7.295
17.547
73.952
A
C3'
DT
7
ATOM
A
C3'
DT
1
7
1.00
1
C
20.19
6.719
18.343
72.979
A
O3'
DT
7
ATOM
A
O3'
DT
1
7
1.00
1
O
18.70
8.644
17.283
73.384
A
C2'
DT
7
ATOM
A
C2'
DT
1
7
1.00
1
C
17.25
9.370
18.521
73.741
A
C1'
DT
7
ATOM
A
C1'
DT
1
7
1.00
1
C
15.88
10.832
18.366
73.420
A
N1
DT
7
ATOM
A
N1
DT
1
7
1.00
1
N
15.94
11.489
19.495
72.929
A
C2
DT
7
ATOM
A
C2
DT
1
7
1.00
1
C
17.35
10.994
20.609
72.764
A
O2
DT
7
ATOM
A
O2
DT
1
7
1.00
1
O
15.54
12.805
19.350
72.589
A
N3
DT
7
ATOM
A
N3
DT
1
7
1.00
1
N
13.85
13.538
18.182
72.696
A
C4
DT
7
ATOM
A
C4
DT
1
7
1.00
1
C
12.14
14.730
18.215
72.422
A
O4
DT
7
ATOM
A
O4
DT
1
7
1.00
1
O
14.91
12.797
17.069
73.204
A
C5
DT
7
ATOM
A
C5
DT
1
7
1.00
1
C
16.70
13.515
15.712
73.368
A
C7
DT
7
ATOM
A
C7
DT
1
7
1.00
1
C
15.29
11.497
17.185
73.550
A
C6
DT
7
ATOM
A
C6
DT
1
7
1.00
1
C
21.36
5.164
18.455
72.806
A
P
DT
8
ATOM
A
P
DT
1
8
1.00
1
P
22.97
4.508
19.108
73.958
A
OP1
DT
8
ATOM
A
OP1
DT
1
8
1.00
1
O
21.53
4.682
17.174
72.341
A
OP2
DT
8
ATOM
A
OP2
DT
1
8
1.00
1
O
22.68
5.184
19.556
71.664
A
O5'
DT
8
ATOM
A
O5'
DT
1
8
1.00
1
O
21.36
6.088
20.600
71.956
A
C5'
DT
8
ATOM
A
C5'
DT
1
8
1.00
1
C
22.38
6.404
21.562
70.863
A
C4'
DT
8
ATOM
A
C4'
DT
1
8
1.00
1
C
22.70
7.804
21.440
70.645
A
O4'
DT
8
ATOM
A
O4'
DT
1
8
1.00
1
O
22.54
5.806
21.292
69.509
A
C3'
DT
8
ATOM
A
C3'
DT
1
8
1.00
1
C
25.63
5.717
22.633
69.077
A
O3'
DT
8
ATOM
A
O3'
DT
1
8
1.00
1
O
21.90
6.858
20.442
68.888
A
C2'
DT
8
ATOM
A
C2'
DT
1
8
1.00
1
C
20.98
8.140
21.061
69.359
A
C1'
DT
8
ATOM
A
C1'
DT
1
8
1.00
1
C
20.36
9.344
20.186
69.428
A
N1
DT
8
ATOM
A
N1
DT
1
8
1.00
1
N
19.71
10.584
20.737
69.160
A
C2
DT
8
ATOM
A
C2
DT
1
8
1.00
1
C
22.61
10.766
21.912
68.889
A
O2
DT
8
ATOM
A
O2
DT
1
8
1.00
1
O
19.01
11.672
19.907
69.185
A
N3
DT
8
ATOM
A
N3
DT
1
8
1.00
1
N
18.35
11.620
18.578
69.456
A
C4
DT
8
ATOM
A
C4
DT
1
8
1.00
1
C
18.53
12.619
17.896
69.483
A
O4
DT
8
ATOM
A
O4
DT
1
8
1.00
1
O
18.31
10.335
18.083
69.720
A
C5
DT
8
ATOM
A
C5
DT
1
8
1.00
1
C
18.11
10.230
16.640
70.019
A
C7
DT
8
ATOM
A
C7
DT
1
8
1.00
1
C
19.68
9.247
18.854
69.709
A
C6
DT
8
ATOM
A
C6
DT
1
8
1.00
1
C
26.00
4.976
23.336
67.816
A
P
DT
9
ATOM
A
P
DT
1
9
1.00
1
P
27.31
4.452
24.656
68.243
A
OP1
DT
9
ATOM
A
OP1
DT
1
9
1.00
1
O
27.71
4.114
22.349
67.181
A
OP2
DT
9
ATOM
A
OP2
DT
1
9
1.00
1
O
27.25
6.259
23.553
66.899
A
O5'
DT
9
ATOM
A
O5'
DT
1
9
1.00
1
O
27.16
7.016
24.632
67.356
A
C5'
DT
9
ATOM
A
C5'
DT
1
9
1.00
1
C
28.59
7.996
25.095
66.383
A
C4'
DT
9
ATOM
A
C4'
DT
1
9
1.00
1
C
28.66
9.094
24.167
66.240
A
O4'
DT
9
ATOM
A
O4'
DT
1
9
1.00
1
O
29.30
7.344
25.088
65.061
A
C3'
DT
9
ATOM
A
C3'
DT
1
9
1.00
1
C
32.15
7.784
26.310
64.529
A
O3'
DT
9
ATOM
A
O3'
DT
1
9
1.00
1
O
28.48
7.825
23.781
64.445
A
C2'
DT
9
ATOM
A
C2'
DT
1
9
1.00
1
C
27.10
9.223
23.565
64.978
A
C1'
DT
9
ATOM
A
C1'
DT
1
9
1.00
1
C
25.83
9.655
22.173
65.232
A
N1
DT
9
ATOM
A
N1
DT
1
9
1.00
1
N
25.77
11.024
21.882
65.206
A
C2
DT
9
ATOM
A
C2
DT
1
9
1.00
1
C
27.04
11.907
22.700
65.007
A
O2
DT
9
ATOM
A
O2
DT
1
9
1.00
1
O
24.82
11.424
20.581
65.428
A
N3
DT
9
ATOM
A
N3
DT
1
9
1.00
1
N
25.62
10.562
19.551
65.682
A
C4
DT
9
ATOM
A
C4
DT
1
9
1.00
1
C
26.54
11.011
18.434
65.867
A
O4
DT
9
ATOM
A
O4
DT
1
9
1.00
1
O
25.80
9.156
19.894
65.700
A
C5
DT
9
ATOM
A
C5
DT
1
9
1.00
1
C
24.85
8.154
18.783
65.972
A
C7
DT
9
ATOM
A
C7
DT
1
9
1.00
1
C
26.06
8.748
21.172
65.484
A
C6
DT
9
ATOM
A
C6
DT
1
9
1.00
1
C
33.95
7.255
26.786
63.113
A
P
DG
10
ATOM
A
P
DG
1
10
1.00
1
P
33.59
6.913
28.224
63.206
A
OP1
DG
10
ATOM
A
OP1
DG
1
10
1.00
1
O
33.23
6.285
25.792
62.567
A
OP2
DG
10
ATOM
A
OP2
DG
1
10
1.00
1
O
33.22
8.586
26.605
62.251
A
O5'
DG
10
ATOM
A
O5'
DG
1
10
1.00
1
O
31.16
9.870
27.130
62.570
A
C5'
DG
10
ATOM
A
C5'
DG
1
10
1.00
1
C
30.70
10.964
26.560
61.648
A
C4'
DG
10
ATOM
A
C4'
DG
1
10
1.00
1
C
29.59
11.284
25.157
61.904
A
O4'
DG
10
ATOM
A
O4'
DG
1
10
1.00
1
O
31.29
10.438
26.532
60.195
A
C3'
DG
10
ATOM
A
C3'
DG
1
10
1.00
1
C
34.38
11.612
26.632
59.426
A
O3'
DG
10
ATOM
A
O3'
DG
1
10
1.00
1
O
29.10
9.860
25.104
60.099
A
C2'
DG
10
ATOM
A
C2'
DG
1
10
1.00
1
C
26.67
10.942
24.318
60.820
A
C1'
DG
10
ATOM
A
C1'
DG
1
10
1.00
1
C
24.58
10.481
22.976
61.249
A
N9
DG
10
ATOM
A
N9
DG
1
10
1.00
1
N
23.19
9.202
22.522
61.457
A
C8
DG
10
ATOM
A
C8
DG
1
10
1.00
1
C
21.90
9.107
21.269
61.799
A
N7
DG
10
ATOM
A
N7
DG
1
10
1.00
1
N
22.13
10.419
20.851
61.823
A
C5
DG
10
ATOM
A
C5
DG
1
10
1.00
1
C
21.21
10.928
19.583
62.135
A
C6
DG
10
ATOM
A
C6
DG
1
10
1.00
1
C
21.82
10.278
18.603
62.463
A
O6
DG
10
ATOM
A
O6
DG
1
10
1.00
1
O
21.06
12.321
19.527
62.056
A
N1
DG
10
ATOM
A
N1
DG
1
10
1.00
1
N
19.81
13.124
20.586
61.711
A
C2
DG
10
ATOM
A
C2
DG
1
10
1.00
1
C
18.42
14.420
20.383
61.665
A
N2
DG
10
ATOM
A
N2
DG
1
10
1.00
1
N
21.63
12.655
21.805
61.414
A
N3
DG
10
ATOM
A
N3
DG
1
10
1.00
1
N
23.26
11.283
21.873
61.489
A
C4
DG
10
ATOM
A
C4
DG
1
10
1.00
1
C
36.74
12.047
27.481
58.174
A
P
DC
11
ATOM
A
P
DC
1
11
1.00
1
P
35.81
12.356
28.870
58.607
A
OP1
DC
11
ATOM
A
OP1
DC
1
11
1.00
1
O
36.68
11.191
27.140
57.008
A
OP2
DC
11
ATOM
A
OP2
DC
1
11
1.00
1
O
35.84
13.358
26.652
57.978
A
O5'
DC
11
ATOM
A
O5'
DC
1
11
1.00
1
O
34.17
14.300
26.805
59.021
A
C5'
DC
11
ATOM
A
C5'
DC
1
11
1.00
1
C
32.93
15.414
25.820
58.944
A
C4'
DC
11
ATOM
A
C4'
DC
1
11
1.00
1
C
31.59
14.958
24.463
59.212
A
O4'
DC
11
ATOM
A
O4'
DC
1
11
1.00
1
O
32.52
15.925
25.798
57.508
A
C3'
DC
11
ATOM
A
C3'
DC
1
11
1.00
1
C
34.31
17.323
25.616
57.665
A
O3'
DC
11
ATOM
A
O3'
DC
1
11
1.00
1
O
30.59
15.156
24.638
56.857
A
C2'
DC
11
ATOM
A
C2'
DC
1
11
1.00
1
C
28.84
15.009
23.644
58.008
A
C1'
DC
11
ATOM
A
C1'
DC
1
11
1.00
1
C
25.46
13.764
22.830
57.948
A
N1
DC
11
ATOM
A
N1
DC
1
11
1.00
1
N
23.72
13.877
21.496
58.253
A
C2
DC
11
ATOM
A
C2
DC
1
11
1.00
1
C
22.19
14.961
21.008
58.542
A
O2
DC
11
ATOM
A
O2
DC
1
11
1.00
1
O
22.85
12.767
20.712
58.209
A
N3
DC
11
ATOM
A
N3
DC
1
11
1.00
1
N
23.71
11.558
21.197
57.866
A
C4
DC
11
ATOM
A
C4
DC
1
11
1.00
1
C
21.98
10.494
20.368
57.838
A
N4
DC
11
ATOM
A
N4
DC
1
11
1.00
1
N
24.28
11.423
22.598
57.540
A
C5
DC
11
ATOM
A
C5
DC
1
11
1.00
1
C
25.43
12.547
23.363
57.596
A
C6
DC
11
ATOM
A
C6
DC
1
11
1.00
1
C
36.29
18.304
25.780
56.453
A
P
DG
12
ATOM
A
P
DG
1
12
1.00
1
P
35.19
19.637
26.243
56.936
A
OP1
DG
12
ATOM
A
OP1
DG
1
12
1.00
1
O
36.50
17.558
26.490
55.355
A
OP2
DG
12
ATOM
A
OP2
DG
1
12
1.00
1
O
34.43
18.471
24.254
55.941
A
O5'
DG
12
ATOM
A
O5'
DG
1
12
1.00
1
O
31.75
19.244
23.282
56.612
A
C5'
DG
12
ATOM
A
C5'
DG
1
12
1.00
1
C
30.04
19.368
21.890
55.939
A
C4'
DG
12
ATOM
A
C4'
DG
1
12
1.00
1
C
28.25
18.186
21.055
55.903
A
O4'
DG
12
ATOM
A
O4'
DG
1
12
1.00
1
O
29.19
19.698
22.164
54.461
A
C3'
DG
12
ATOM
A
C3'
DG
1
12
1.00
1
C
30.24
20.509
21.090
53.993
A
O3'
DG
12
ATOM
A
O3'
DG
1
12
1.00
1
O
27.07
18.343
22.155
53.834
A
C2'
DG
12
ATOM
A
C2'
DG
1
12
1.00
1
C
26.40
17.757
20.969
54.565
A
C1'
DG
12
ATOM
A
C1'
DG
1
12
1.00
1
C
24.63
16.322
20.926
54.522
A
N9
DG
12
ATOM
A
N9
DG
1
12
1.00
1
N
23.98
15.544
21.973
54.218
A
C8
DG
12
ATOM
A
C8
DG
1
12
1.00
1
C
24.08
14.287
21.714
54.275
A
N7
DG
12
ATOM
A
N7
DG
1
12
1.00
1
N
23.55
14.214
20.367
54.623
A
C5
DG
12
ATOM
A
C5
DG
1
12
1.00
1
C
23.07
13.055
19.566
54.804
A
C6
DG
12
ATOM
A
C6
DG
1
12
1.00
1
C
23.91
11.883
19.919
54.676
A
O6
DG
12
ATOM
A
O6
DG
1
12
1.00
1
O
21.93
13.383
18.286
55.153
A
N1
DG
12
ATOM
A
N1
DG
1
12
1.00
1
N
21.49
14.659
17.826
55.320
A
C2
DG
12
ATOM
A
C2
DG
1
12
1.00
1
C
22.20
14.765
16.564
55.658
A
N2
DG
12
ATOM
A
N2
DG
1
12
1.00
1
N
22.22
15.767
18.553
55.158
A
N3
DG
12
ATOM
A
N3
DG
1
12
1.00
1
N
23.93
15.468
19.845
54.797
A
C4
DG
12
ATOM
A
C4
DG
1
12
1.00
1
C
35.82
8.113
9.702
55.580
B
O5'
DC
13
ATOM
B
O5'
DC
1
1
1.00
1
O
33.22
8.729
10.914
55.149
B
C5'
DC
13
ATOM
B
C5'
DC
1
1
1.00
1
C
32.22
10.031
11.066
55.894
B
C4'
DC
13
ATOM
B
C4'
DC
1
1
1.00
1
C
31.84
10.691
12.260
55.547
B
O4'
DC
13
ATOM
B
O4'
DC
1
1
1.00
1
O
32.30
9.761
11.209
57.358
B
C3'
DC
13
ATOM
B
C3'
DC
1
1
1.00
1
C
32.94
10.972
10.920
57.939
B
O3'
DC
13
ATOM
B
O3'
DC
1
1
1.00
1
O
31.89
9.503
12.666
57.514
B
C2'
DC
13
ATOM
B
C2'
DC
1
1
1.00
1
C
31.18
10.614
13.190
56.624
B
C1'
DC
13
ATOM
B
C1'
DC
1
1
1.00
1
C
30.16
10.352
14.534
56.077
B
N1
DC
13
ATOM
B
N1
DC
1
1
1.00
1
N
28.81
11.400
15.362
55.929
B
C2
DC
13
ATOM
B
C2
DC
1
1
1.00
1
C
28.07
12.506
14.973
56.239
B
O2
DC
13
ATOM
B
O2
DC
1
1
1.00
1
O
28.92
11.190
16.593
55.417
B
N3
DC
13
ATOM
B
N3
DC
1
1
1.00
1
N
29.63
9.968
16.991
55.068
B
C4
DC
13
ATOM
B
C4
DC
1
1
1.00
1
C
30.30
9.724
18.189
54.576
B
N4
DC
13
ATOM
B
N4
DC
1
1
1.00
1
N
30.41
8.861
16.139
55.214
B
C5
DC
13
ATOM
B
C5
DC
1
1
1.00
1
C
31.02
9.104
14.922
55.729
B
C6
DC
13
ATOM
B
C6
DC
1
1
1.00
1
C
34.38
11.124
9.801
59.038
B
P
DG
14
ATOM
B
P
DG
1
2
1.00
1
P
34.06
10.916
8.482
58.378
B
OP1
DG
14
ATOM
B
OP1
DG
1
2
1.00
1
O
33.04
10.392
10.204
60.287
B
OP2
DG
14
ATOM
B
OP2
DG
1
2
1.00
1
O
31.92
12.650
9.997
59.283
B
O5'
DG
14
ATOM
B
O5'
DG
1
2
1.00
1
O
28.53
13.565
10.025
58.223
B
C5'
DG
14
ATOM
B
C5'
DG
1
2
1.00
1
C
26.66
14.779
10.804
58.613
B
C4'
DG
14
ATOM
B
C4'
DG
1
2
1.00
1
C
25.87
14.563
12.169
58.294
B
O4'
DG
14
ATOM
B
O4'
DG
1
2
1.00
1
O
25.76
14.960
10.804
60.093
B
C3'
DG
14
ATOM
B
C3'
DG
1
2
1.00
1
C
26.59
16.304
10.814
60.437
B
O3'
DG
14
ATOM
B
O3'
DG
1
2
1.00
1
O
25.85
14.317
12.052
60.522
B
C2'
DG
14
ATOM
B
C2'
DG
1
2
1.00
1
C
25.73
14.556
13.036
59.407
B
C1'
DG
14
ATOM
B
C1'
DG
1
2
1.00
1
C
25.31
13.445
14.046
59.422
B
N9
DG
14
ATOM
B
N9
DG
1
2
1.00
1
N
24.39
12.133
13.803
59.666
B
C8
DG
14
ATOM
B
C8
DG
1
2
1.00
1
C
24.87
11.386
14.861
59.667
B
N7
DG
14
ATOM
B
N7
DG
1
2
1.00
1
N
24.09
12.250
15.900
59.404
B
C5
DG
14
ATOM
B
C5
DG
1
2
1.00
1
C
23.90
11.958
17.281
59.287
B
C6
DG
14
ATOM
B
C6
DG
1
2
1.00
1
C
24.06
10.857
17.861
59.369
B
O6
DG
14
ATOM
B
O6
DG
1
2
1.00
1
O
23.08
13.104
17.988
59.019
B
N1
DG
14
ATOM
B
N1
DG
1
2
1.00
1
N
21.87
14.353
17.464
58.881
B
C2
DG
14
ATOM
B
C2
DG
1
2
1.00
1
C
20.02
15.329
18.324
58.618
B
N2
DG
14
ATOM
B
N2
DG
1
2
1.00
1
N
23.25
14.630
16.162
58.989
B
N3
DG
14
ATOM
B
N3
DG
1
2
1.00
1
N
24.34
13.523
15.430
59.251
B
C4
DG
14
ATOM
B
C4
DG
1
2
1.00
1
C
27.88
16.884
10.596
61.947
B
P
DC
15
ATOM
B
P
DC
1
3
1.00
1
P
28.01
18.097
9.744
61.823
B
OP1
DC
15
ATOM
B
OP1
DC
1
3
1.00
1
O
27.26
15.828
10.231
62.943
B
OP2
DC
15
ATOM
B
OP2
DC
1
3
1.00
1
O
26.37
17.368
12.093
62.284
B
O5'
DC
15
ATOM
B
O5'
DC
1
3
1.00
1
O
22.94
18.347
12.597
61.403
B
C5'
DC
15
ATOM
B
C5'
DC
1
3
1.00
1
C
21.60
18.663
14.049
61.544
B
C4'
DC
15
ATOM
B
C4'
DC
1
3
1.00
1
C
19.12
17.496
14.860
61.308
B
O4'
DC
15
ATOM
B
O4'
DC
1
3
1.00
1
O
22.61
18.989
14.302
62.972
B
C3'
DC
15
ATOM
B
C3'
DC
1
3
1.00
1
C
23.95
20.068
15.211
63.143
B
O3'
DC
15
ATOM
B
O3'
DC
1
3
1.00
1
O
22.40
17.696
14.891
63.504
B
C2'
DC
15
ATOM
B
C2'
DC
1
3
1.00
1
C
19.61
17.116
15.665
62.392
B
C1'
DC
15
ATOM
B
C1'
DC
1
3
1.00
1
C
18.69
15.671
15.743
62.553
B
N1
DC
15
ATOM
B
N1
DC
1
3
1.00
1
N
18.91
15.069
16.981
62.446
B
C2
DC
15
ATOM
B
C2
DC
1
3
1.00
1
C
19.29
15.698
17.999
62.185
B
O2
DC
15
ATOM
B
O2
DC
1
3
1.00
1
O
18.32
13.722
17.077
62.619
B
N3
DC
15
ATOM
B
N3
DC
1
3
1.00
1
N
18.15
12.990
16.008
62.878
B
C4
DC
15
ATOM
B
C4
DC
1
3
1.00
1
C
20.02
11.664
16.172
63.030
B
N4
DC
15
ATOM
B
N4
DC
1
3
1.00
1
N
17.56
13.586
14.733
62.987
B
C5
DC
15
ATOM
B
C5
DC
1
3
1.00
1
C
18.72
14.923
14.650
62.817
B
C6
DC
15
ATOM
B
C6
DC
1
3
1.00
1
C
23.08
20.884
15.094
64.539
B
P
DA
16
ATOM
B
P
DA
1
4
1.00
1
P
22.19
22.268
14.629
64.305
B
OP1
DA
16
ATOM
B
OP1
DA
1
4
1.00
1
O
22.20
20.015
14.494
65.556
B
OP2
DA
16
ATOM
B
OP2
DA
1
4
1.00
1
O
22.27
20.954
16.607
64.853
B
O5'
DA
16
ATOM
B
O5'
DA
1
4
1.00
1
O
21.86
21.587
17.333
63.814
B
C5'
DA
16
ATOM
B
C5'
DA
1
4
1.00
1
C
21.20
21.200
18.768
63.881
B
C4'
DA
16
ATOM
B
C4'
DA
1
4
1.00
1
C
20.18
19.799
18.865
63.924
B
O4'
DA
16
ATOM
B
O4'
DA
1
4
1.00
1
O
22.16
21.637
19.399
65.165
B
C3'
DA
16
ATOM
B
C3'
DA
1
4
1.00
1
C
24.10
21.811
20.765
64.798
B
O3'
DA
16
ATOM
B
O3'
DA
1
4
1.00
1
O
20.42
20.473
19.116
66.102
B
C2'
DA
16
ATOM
B
C2'
DA
1
4
1.00
1
C
18.13
19.315
19.293
65.181
B
C1'
DA
16
ATOM
B
C1'
DA
1
4
1.00
1
C
15.55
18.060
18.545
65.504
B
N9
DA
16
ATOM
B
N9
DA
1
4
1.00
1
N
14.45
17.884
17.301
66.041
B
C8
DA
16
ATOM
B
C8
DA
1
4
1.00
1
C
14.16
16.650
16.950
66.213
B
N7
DA
16
ATOM
B
N7
DA
1
4
1.00
1
N
13.96
15.942
18.078
65.737
B
C5
DA
16
ATOM
B
C5
DA
1
4
1.00
1
C
13.33
14.577
18.391
65.618
B
C6
DA
16
ATOM
B
C6
DA
1
4
1.00
1
C
15.25
13.638
17.521
65.991
B
N6
DA
16
ATOM
B
N6
DA
1
4
1.00
1
N
13.44
14.207
19.586
65.104
B
N1
DA
16
ATOM
B
N1
DA
1
4
1.00
1
N
12.61
15.133
20.431
64.715
B
C2
DA
16
ATOM
B
C2
DA
1
4
1.00
1
C
14.16
16.418
20.228
64.787
B
N3
DA
16
ATOM
B
N3
DA
1
4
1.00
1
N
14.24
16.790
19.036
65.307
B
C4
DA
16
ATOM
B
C4
DA
1
4
1.00
1
C
26.17
22.536
21.764
65.806
B
P
DA
17
ATOM
B
P
DA
1
5
1.00
1
P
26.42
23.512
22.611
65.070
B
OP1
DA
17
ATOM
B
OP1
DA
1
5
1.00
1
O
24.51
22.962
20.963
66.972
B
OP2
DA
17
ATOM
B
OP2
DA
1
5
1.00
1
O
24.51
21.281
22.709
66.122
B
O5'
DA
17
ATOM
B
O5'
DA
1
5
1.00
1
O
24.28
20.808
23.414
64.983
B
C5'
DA
17
ATOM
B
C5'
DA
1
5
1.00
1
C
23.54
19.569
24.223
65.182
B
C4'
DA
17
ATOM
B
C4'
DA
1
5
1.00
1
C
21.73
18.408
23.473
65.533
B
O4'
DA
17
ATOM
B
O4'
DA
1
5
1.00
1
O
25.47
19.841
25.050
66.325
B
C3'
DA
17
ATOM
B
C3'
DA
1
5
1.00
1
C
27.65
19.179
26.276
65.971
B
O3'
DA
17
ATOM
B
O3'
DA
1
5
1.00
1
O
24.02
19.261
24.169
67.481
B
C2'
DA
17
ATOM
B
C2'
DA
1
5
1.00
1
C
20.93
18.036
23.551
66.883
B
C1'
DA
17
ATOM
B
C1'
DA
1
5
1.00
1
C
17.69
17.739
22.241
67.526
B
N9
DA
17
ATOM
B
N9
DA
1
5
1.00
1
N
16.77
18.491
21.225
68.031
B
C8
DA
17
ATOM
B
C8
DA
1
5
1.00
1
C
16.38
17.814
20.232
68.551
B
N7
DA
17
ATOM
B
N7
DA
1
5
1.00
1
N
16.19
16.507
20.639
68.371
B
C5
DA
17
ATOM
B
C5
DA
1
5
1.00
1
C
16.92
15.277
20.061
68.699
B
C6
DA
17
ATOM
B
C6
DA
1
5
1.00
1
C
17.04
15.120
18.876
69.286
B
N6
DA
17
ATOM
B
N6
DA
1
5
1.00
1
N
17.48
14.198
20.742
68.379
B
N1
DA
17
ATOM
B
N1
DA
1
5
1.00
1
N
18.24
14.331
21.912
67.776
B
C2
DA
17
ATOM
B
C2
DA
1
5
1.00
1
C
17.34
15.419
22.569
67.408
B
N3
DA
17
ATOM
B
N3
DA
1
5
1.00
1
N
16.96
16.480
21.848
67.751
B
C4
DA
17
ATOM
B
C4
DA
1
5
1.00
1
C
27.43
19.548
27.558
66.847
B
P
DA
18
ATOM
B
P
DA
1
6
1.00
1
P
27.46
19.594
28.763
65.986
B
OP1
DA
18
ATOM
B
OP1
DA
1
6
1.00
1
O
27.57
20.700
27.166
67.730
B
OP2
DA
18
ATOM
B
OP2
DA
1
6
1.00
1
O
27.18
18.174
27.610
67.685
B
O5'
DA
18
ATOM
B
O5'
DA
1
6
1.00
1
O
24.51
16.970
27.669
66.913
B
C5'
DA
18
ATOM
B
C5'
DA
1
6
1.00
1
C
23.00
15.645
27.667
67.656
B
C4'
DA
18
ATOM
B
C4'
DA
1
6
1.00
1
C
19.15
15.323
26.356
68.164
B
O4'
DA
18
ATOM
B
O4'
DA
1
6
1.00
1
O
23.07
15.766
28.562
68.908
B
C3'
DA
18
ATOM
B
C3'
DA
1
6
1.00
1
C
27.40
14.504
29.192
69.119
B
O3'
DA
18
ATOM
B
O3'
DA
1
6
1.00
1
O
20.17
16.082
27.521
69.948
B
C2'
DA
18
ATOM
B
C2'
DA
1
6
1.00
1
C
16.91
15.257
26.332
69.561
B
C1'
DA
18
ATOM
B
C1'
DA
1
6
1.00
1
C
13.15
15.804
25.078
70.115
B
N9
DA
18
ATOM
B
N9
DA
1
6
1.00
1
N
11.98
17.112
24.713
70.275
B
C8
DA
18
ATOM
B
C8
DA
1
6
1.00
1
C
10.52
17.261
23.542
70.832
B
N7
DA
18
ATOM
B
N7
DA
1
6
1.00
1
N
8.83
15.964
23.095
71.054
B
C5
DA
18
ATOM
B
C5
DA
1
6
1.00
1
C
8.14
15.468
21.922
71.606
B
C6
DA
18
ATOM
B
C6
DA
1
6
1.00
1
C
5.53
16.238
20.925
72.058
B
N6
DA
18
ATOM
B
N6
DA
1
6
1.00
1
N
8.26
14.136
21.796
71.676
B
N1
DA
18
ATOM
B
N1
DA
1
6
1.00
1
N
8.89
13.374
22.785
71.225
B
C2
DA
18
ATOM
B
C2
DA
1
6
1.00
1
C
10.47
13.715
23.944
70.676
B
N3
DA
18
ATOM
B
N3
DA
1
6
1.00
1
N
10.31
15.066
24.026
70.621
B
C4
DA
18
ATOM
B
C4
DA
1
6
1.00
1
C
30.37
14.187
30.242
70.272
B
P
DT
19
ATOM
B
P
DT
1
7
1.00
1
P
30.86
13.167
31.173
69.754
B
OP1
DT
19
ATOM
B
OP1
DT
1
7
1.00
1
O
30.51
15.470
30.758
70.865
B
OP2
DT
19
ATOM
B
OP2
DT
1
7
1.00
1
O
29.29
13.486
29.336
71.352
B
O5'
DT
19
ATOM
B
O5'
DT
1
7
1.00
1
O
26.72
12.199
28.988
70.957
B
C5'
DT
19
ATOM
B
C5'
DT
1
7
1.00
1
C
25.61
11.517
28.051
71.880
B
C4'
DT
19
ATOM
B
C4'
DT
1
7
1.00
1
C
24.71
12.269
26.827
72.062
B
O4'
DT
19
ATOM
B
O4'
DT
1
7
1.00
1
O
24.90
11.502
28.753
73.230
B
C3'
DT
19
ATOM
B
C3'
DT
1
7
1.00
1
C
24.87
10.334
28.366
73.888
B
O3'
DT
19
ATOM
B
O3'
DT
1
7
1.00
1
O
24.53
12.719
28.143
73.866
B
C2'
DT
19
ATOM
B
C2'
DT
1
7
1.00
1
C
22.98
12.591
26.730
73.414
B
C1'
DT
19
ATOM
B
C1'
DT
1
7
1.00
1
C
22.02
13.793
25.887
73.728
B
N1
DT
19
ATOM
B
N1
DT
1
7
1.00
1
N
21.73
13.461
24.656
74.217
B
C2
DT
19
ATOM
B
C2
DT
1
7
1.00
1
C
24.31
12.293
24.284
74.326
B
O2
DT
19
ATOM
B
O2
DT
1
7
1.00
1
O
21.19
14.477
23.806
74.584
B
N3
DT
19
ATOM
B
N3
DT
1
7
1.00
1
N
20.11
15.810
24.057
74.520
B
C4
DT
19
ATOM
B
C4
DT
1
7
1.00
1
C
18.44
16.592
23.165
74.882
B
O4
DT
19
ATOM
B
O4
DT
1
7
1.00
1
O
20.03
16.095
25.376
73.999
B
C5
DT
19
ATOM
B
C5
DT
1
7
1.00
1
C
19.36
17.537
25.818
73.875
B
C7
DT
19
ATOM
B
C7
DT
1
7
1.00
1
C
20.49
15.112
26.237
73.619
B
C6
DT
19
ATOM
B
C6
DT
1
7
1.00
1
C
27.15
9.440
29.358
74.798
B
P
DT
20
ATOM
B
P
DT
1
8
1.00
1
P
26.56
8.383
30.036
74.009
B
OP1
DT
20
ATOM
B
OP1
DT
1
8
1.00
1
O
27.31
10.304
30.153
75.716
B
OP2
DT
20
ATOM
B
OP2
DT
1
8
1.00
1
O
25.46
8.655
28.215
75.613
B
O5'
DT
20
ATOM
B
O5'
DT
1
8
1.00
1
O
24.77
9.083
26.882
75.496
B
C5'
DT
20
ATOM
B
C5'
DT
1
8
1.00
1
C
24.24
8.401
25.973
76.396
B
C4'
DT
20
ATOM
B
C4'
DT
1
8
1.00
1
C
23.36
9.364
24.946
76.643
B
O4'
DT
20
ATOM
B
O4'
DT
1
8
1.00
1
O
25.43
8.064
26.565
77.708
B
C3'
DT
20
ATOM
B
C3'
DT
1
8
1.00
1
C
28.56
6.997
25.772
78.202
B
O3'
DT
20
ATOM
B
O3'
DT
1
8
1.00
1
O
23.32
9.357
26.381
78.435
B
C2'
DT
20
ATOM
B
C2'
DT
1
8
1.00
1
C
21.64
9.880
25.079
77.922
B
C1'
DT
20
ATOM
B
C1'
DT
1
8
1.00
1
C
19.54
11.312
25.071
77.832
B
N1
DT
20
ATOM
B
N1
DT
1
8
1.00
1
N
19.00
11.908
23.886
78.112
B
C2
DT
20
ATOM
B
C2
DT
1
8
1.00
1
C
20.00
11.276
22.863
78.389
B
O2
DT
20
ATOM
B
O2
DT
1
8
1.00
1
O
19.74
13.282
23.881
78.048
B
N3
DT
20
ATOM
B
N3
DT
1
8
1.00
1
N
20.02
14.094
24.961
77.721
B
C4
DT
20
ATOM
B
C4
DT
1
8
1.00
1
C
21.76
15.316
24.872
77.674
B
O4
DT
20
ATOM
B
O4
DT
1
8
1.00
1
O
19.91
13.383
26.150
77.441
B
C5
DT
20
ATOM
B
C5
DT
1
8
1.00
1
C
18.06
14.194
27.358
77.067
B
C7
DT
20
ATOM
B
C7
DT
1
8
1.00
1
C
19.78
12.032
26.178
77.497
B
C6
DT
20
ATOM
B
C6
DT
1
8
1.00
1
C
30.66
6.392
26.105
79.640
B
P
DT
21
ATOM
B
P
DT
1
9
1.00
1
P
31.17
4.941
25.772
79.595
B
OP1
DT
21
ATOM
B
OP1
DT
1
9
1.00
1
O
30.64
6.849
27.454
80.056
B
OP2
DT
21
ATOM
B
OP2
DT
1
9
1.00
1
O
29.41
7.142
25.041
80.558
B
O5'
DT
21
ATOM
B
O5'
DT
1
9
1.00
1
O
27.17
6.755
23.706
80.363
B
C5'
DT
21
ATOM
B
C5'
DT
1
9
1.00
1
C
26.06
7.484
22.690
81.181
B
C4'
DT
21
ATOM
B
C4'
DT
1
9
1.00
1
C
25.37
8.937
22.758
80.962
B
O4'
DT
21
ATOM
B
O4'
DT
1
9
1.00
1
O
26.09
7.329
23.107
82.642
B
C3'
DT
21
ATOM
B
C3'
DT
1
9
1.00
1
C
27.49
7.096
21.928
83.428
B
O3'
DT
21
ATOM
B
O3'
DT
1
9
1.00
1
O
24.58
8.638
23.815
82.963
B
C2'
DT
21
ATOM
B
C2'
DT
1
9
1.00
1
C
22.43
9.650
23.031
82.168
B
C1'
DT
21
ATOM
B
C1'
DT
1
9
1.00
1
C
19.48
10.903
23.759
81.861
B
N1
DT
21
ATOM
B
N1
DT
1
9
1.00
1
N
18.91
12.128
23.117
81.951
B
C2
DT
21
ATOM
B
C2
DT
1
9
1.00
1
C
19.90
12.278
21.942
82.240
B
O2
DT
21
ATOM
B
O2
DT
1
9
1.00
1
O
18.30
13.276
23.826
81.675
B
N3
DT
21
ATOM
B
N3
DT
1
9
1.00
1
N
18.26
13.318
25.127
81.319
B
C4
DT
21
ATOM
B
C4
DT
1
9
1.00
1
C
19.26
14.394
25.654
81.083
B
O4
DT
21
ATOM
B
O4
DT
1
9
1.00
1
O
19.14
12.027
25.743
81.244
B
C5
DT
21
ATOM
B
C5
DT
1
9
1.00
1
C
18.19
11.951
27.227
80.872
B
C7
DT
21
ATOM
B
C7
DT
1
9
1.00
1
C
19.70
10.877
25.051
81.514
B
C6
DT
21
ATOM
B
C6
DT
1
9
1.00
1
C
28.12
6.330
22.137
84.813
B
P
DG
22
ATOM
B
P
DG
1
10
1.00
1
P
28.97
5.181
21.214
84.860
B
OP1
DG
22
ATOM
B
OP1
DG
1
10
1.00
1
O
27.93
6.146
23.599
85.030
B
OP2
DG
22
ATOM
B
OP2
DG
1
10
1.00
1
O
27.10
7.321
21.678
85.953
B
O5'
DG
22
ATOM
B
O5'
DG
1
10
1.00
1
O
25.18
8.135
20.517
85.822
B
C5'
DG
22
ATOM
B
C5'
DG
1
10
1.00
1
C
23.63
9.451
20.492
86.679
B
C4'
DG
22
ATOM
B
C4'
DG
1
10
1.00
1
C
21.72
10.542
21.275
86.118
B
O4'
DG
22
ATOM
B
O4'
DG
1
10
1.00
1
O
22.74
9.202
21.229
88.025
B
C3'
DG
22
ATOM
B
C3'
DG
1
10
1.00
1
C
25.35
10.057
20.527
88.868
B
O3'
DG
22
ATOM
B
O3'
DG
1
10
1.00
1
O
20.23
9.680
22.663
87.768
B
C2'
DG
22
ATOM
B
C2'
DG
1
10
1.00
1
C
19.04
10.931
22.298
86.991
B
C1'
DG
22
ATOM
B
C1'
DG
1
10
1.00
1
C
16.80
11.599
23.439
86.297
B
N9
DG
22
ATOM
B
N9
DG
1
10
1.00
1
N
16.60
11.042
24.656
86.003
B
C8
DG
22
ATOM
B
C8
DG
1
10
1.00
1
C
16.79
11.872
25.505
85.438
B
N7
DG
22
ATOM
B
N7
DG
1
10
1.00
1
N
14.47
13.079
24.813
85.341
B
C5
DG
22
ATOM
B
C5
DG
1
10
1.00
1
C
14.49
14.328
25.251
84.816
B
C6
DG
22
ATOM
B
C6
DG
1
10
1.00
1
C
15.42
14.627
26.341
84.302
B
O6
DG
22
ATOM
B
O6
DG
1
10
1.00
1
O
13.33
15.306
24.267
84.907
B
N1
DG
22
ATOM
B
N1
DG
1
10
1.00
1
N
13.03
15.097
23.049
85.429
B
C2
DG
22
ATOM
B
C2
DG
1
10
1.00
1
C
12.61
16.127
22.257
85.426
B
N2
DG
22
ATOM
B
N2
DG
1
10
1.00
1
N
14.80
13.927
22.630
85.924
B
N3
DG
22
ATOM
B
N3
DG
1
10
1.00
1
N
14.73
12.939
23.554
85.857
B
C4
DG
22
ATOM
B
C4
DG
1
10
1.00
1
C
28.00
9.621
19.443
89.933
B
P
DC
23
ATOM
B
P
DC
1
11
1.00
1
P
27.77
8.933
18.285
89.271
B
OP1
DC
23
ATOM
B
OP1
DC
1
11
1.00
1
O
26.77
9.036
20.208
91.043
B
OP2
DC
23
ATOM
B
OP2
DC
1
11
1.00
1
O
28.05
11.007
18.925
90.455
B
O5'
DC
23
ATOM
B
O5'
DC
1
11
1.00
1
O
27.96
11.835
18.290
89.457
B
C5'
DC
23
ATOM
B
C5'
DC
1
11
1.00
1
C
27.60
13.329
18.295
89.786
B
C4'
DC
23
ATOM
B
C4'
DC
1
11
1.00
1
C
25.62
14.004
19.351
89.054
B
O4'
DC
23
ATOM
B
O4'
DC
1
11
1.00
1
O
28.20
13.486
18.636
91.287
B
C3'
DC
23
ATOM
B
C3'
DC
1
11
1.00
1
C
31.44
14.640
18.053
91.903
B
O3'
DC
23
ATOM
B
O3'
DC
1
11
1.00
1
O
25.85
13.677
20.094
91.208
B
C2'
DC
23
ATOM
B
C2'
DC
1
11
1.00
1
C
23.89
14.527
20.304
89.933
B
C1'
DC
23
ATOM
B
C1'
DC
1
11
1.00
1
C
21.53
14.385
21.735
89.559
B
N1
DC
23
ATOM
B
N1
DC
1
11
1.00
1
N
19.79
15.470
22.497
89.182
B
C2
DC
23
ATOM
B
C2
DC
1
11
1.00
1
C
17.52
16.598
22.037
89.060
B
O2
DC
23
ATOM
B
O2
DC
1
11
1.00
1
O
18.31
15.253
23.808
88.925
B
N3
DC
23
ATOM
B
N3
DC
1
11
1.00
1
N
19.44
14.035
24.361
89.024
B
C4
DC
23
ATOM
B
C4
DC
1
11
1.00
1
C
20.36
13.779
25.643
88.780
B
N4
DC
23
ATOM
B
N4
DC
1
11
1.00
1
N
20.27
12.930
23.607
89.397
B
C5
DC
23
ATOM
B
C5
DC
1
11
1.00
1
C
22.03
13.155
22.306
89.647
B
C6
DC
23
ATOM
B
C6
DC
1
11
1.00
1
C
34.55
14.749
17.875
93.567
B
P
DG
24
ATOM
B
P
DG
1
12
1.00
1
P
34.86
14.977
16.444
93.910
B
OP1
DG
24
ATOM
B
OP1
DG
1
12
1.00
1
O
33.79
13.656
18.594
94.303
B
OP2
DG
24
ATOM
B
OP2
DG
1
12
1.00
1
O
32.66
16.137
18.712
93.798
B
O5'
DG
24
ATOM
B
O5'
DG
1
12
1.00
1
O
30.27
17.232
18.098
93.128
B
C5'
DG
24
ATOM
B
C5'
DG
1
12
1.00
1
C
28.89
18.503
18.880
92.867
B
C4'
DG
24
ATOM
B
C4'
DG
1
12
1.00
1
C
27.26
18.359
20.121
92.084
B
O4'
DG
24
ATOM
B
O4'
DG
1
12
1.00
1
O
27.87
18.909
19.310
94.223
B
C3'
DG
24
ATOM
B
C3'
DG
1
12
1.00
1
C
29.27
20.308
19.219
94.517
B
O3'
DG
24
ATOM
B
O3'
DG
1
12
1.00
1
O
27.00
18.486
20.743
94.309
B
C2'
DG
24
ATOM
B
C2'
DG
1
12
1.00
1
C
25.73
18.608
21.302
92.918
B
C1'
DG
24
ATOM
B
C1'
DG
1
12
1.00
1
C
23.40
17.568
22.356
92.779
B
N9
DG
24
ATOM
B
N9
DG
1
12
1.00
1
N
21.98
16.254
22.253
93.107
B
C8
DG
24
ATOM
B
C8
DG
1
12
1.00
1
C
22.07
15.576
23.330
92.873
B
N7
DG
24
ATOM
B
N7
DG
1
12
1.00
1
N
21.10
16.500
24.219
92.350
B
C5
DG
24
ATOM
B
C5
DG
1
12
1.00
1
C
21.66
16.319
25.536
91.906
B
C6
DG
24
ATOM
B
C6
DG
1
12
1.00
1
C
24.00
15.262
26.167
91.921
B
O6
DG
24
ATOM
B
O6
DG
1
12
1.00
1
O
20.62
17.486
26.130
91.424
B
N1
DG
24
ATOM
B
N1
DG
1
12
1.00
1
N
21.08
18.702
25.497
91.380
B
C2
DG
24
ATOM
B
C2
DG
1
12
1.00
1
C
21.21
19.772
26.189
90.911
B
N2
DG
24
ATOM
B
N2
DG
1
12
1.00
1
N
21.21
18.853
24.227
91.808
B
N3
DG
24
ATOM
B
N3
DG
1
12
1.00
1
N
21.75
17.723
23.648
92.281
B
C4
DG
24
ATOM
B
C4
DG
1
12
1.00
1
C
34.53
10.781
26.217
68.705
B
C1
TNT
25
HETATM
C
C1
TNT
2
1.00
1
C
34.77
11.798
25.261
68.487
B
C2
TNT
25
HETATM
C
C2
TNT
2
1.00
1
C
35.10
12.558
25.333
67.322
B
C3
TNT
25
HETATM
C
C3
TNT
2
1.00
1
C
35.63
12.327
26.313
66.344
B
C4
TNT
25
HETATM
C
C4
TNT
2
1.00
1
C
34.92
11.317
27.268
66.576
B
C5
TNT
25
HETATM
C
C5
TNT
2
1.00
1
C
35.01
10.564
27.211
67.747
B
C6
TNT
25
HETATM
C
C6
TNT
2
1.00
1
C
37.48
13.017
26.277
65.101
B
C7
TNT
25
HETATM
C
C7
TNT
2
1.00
1
C
37.59
13.731
25.190
64.715
B
N1
TNT
25
HETATM
C
N1
TNT
2
1.00
1
N
38.74
12.897
27.336
64.263
B
N2
TNT
25
HETATM
C
N2
TNT
2
1.00
1
N
31.77
7.760
23.098
74.471
B
C1'
TNT
25
HETATM
C
C1'
TNT
2
1.00
1
C
31.94
6.587
22.781
75.210
B
C2'
TNT
25
HETATM
C
C2'
TNT
2
1.00
1
C
32.80
6.636
22.017
76.395
B
C3'
TNT
25
HETATM
C
C3'
TNT
2
1.00
1
C
33.51
7.943
21.550
76.821
B
C4'
TNT
25
HETATM
C
C4'
TNT
2
1.00
1
C
33.37
9.062
21.855
76.068
B
C5'
TNT
25
HETATM
C
C5'
TNT
2
1.00
1
C
32.52
8.997
22.609
74.929
B
C6'
TNT
25
HETATM
C
C6'
TNT
2
1.00
1
C
34.35
8.182
20.782
77.981
B
C7'
TNT
25
HETATM
C
C7'
TNT
2
1.00
1
C
33.97
9.366
20.869
78.623
B
N1'
TNT
25
HETATM
C
N1'
TNT
2
1.00
1
N
33.75
7.137
20.056
78.489
B
N2'
TNT
25
HETATM
C
N2'
TNT
2
1.00
1
N
33.59
9.886
24.945
70.484
B
CA
TNT
25
HETATM
C
CA
TNT
2
1.00
1
C
34.36
9.931
26.184
69.760
B
O1
TNT
25
HETATM
C
O1
TNT
2
1.00
1
O
33.52
8.720
25.013
71.467
B
CB
TNT
25
HETATM
C
CB
TNT
2
1.00
1
C
32.74
8.958
24.070
72.636
B
CA'
TNT
25
HETATM
C
CA'
TNT
2
1.00
1
C
32.48
7.691
23.867
73.326
B
O1'
TNT
25
HETATM
C
O1'
TNT
2
1.00
1
O
24.72
20.792
22.549
51.338
A
O
HOH
26
HETATM
D
O
HOH
3
1.00
1
O
48.42
22.015
24.465
79.586
A
O
HOH
27
HETATM
D
O
HOH
3
1.00
1
O
24.50
21.676
25.630
58.632
A
O
HOH
29
HETATM
D
O
HOH
3
1.00
1
O
33.08
10.405
15.732
66.552
A
O
HOH
31
HETATM
D
O
HOH
3
1.00
1
O
33.93
26.135
32.131
84.504
A
O
HOH
34
HETATM
D
O
HOH
3
1.00
1
O
31.09
6.301
24.450
59.698
A
O
HOH
35
HETATM
D
O
HOH
3
1.00
1
O
32.33
12.066
13.542
70.397
A
O
HOH
37
HETATM
D
O
HOH
3
1.00
1
O
44.56
13.608
15.383
69.202
A
O
HOH
38
HETATM
D
O
HOH
3
1.00
1
O
52.29
7.029
16.991
61.203
A
O
HOH
40
HETATM
D
O
HOH
3
1.00
1
O
57.56
28.420
23.825
83.858
A
O
HOH
41
HETATM
D
O
HOH
3
1.00
1
O
67.70
17.290
17.109
74.575
A
O
HOH
42
HETATM
D
O
HOH
3
1.00
1
O
42.35
12.303
18.666
81.600
A
O
HOH
44
HETATM
D
O
HOH
3
1.00
1
O
55.09
21.001
28.264
58.915
A
O
HOH
45
HETATM
D
O
HOH
3
1.00
1
O
54.41
3.077
25.873
59.117
A
O
HOH
47
HETATM
D
O
HOH
3
1.00
1
O
46.51
22.234
21.389
77.187
A
O
HOH
50
HETATM
D
O
HOH
3
1.00
1
O
36.28
10.785
7.780
80.954
A
O
HOH
52
HETATM
D
O
HOH
3
1.00
1
O
20.63
10.727
11.945
77.462
A
O
HOH
53
HETATM
D
O
HOH
3
1.00
1
O
51.71
4.871
23.417
62.549
A
O
HOH
54
HETATM
D
O
HOH
3
1.00
1
O
67.94
10.574
30.772
64.640
A
O
HOH
59
HETATM
D
O
HOH
3
1.00
1
O
46.03
14.476
29.327
87.402
A
O
HOH
63
HETATM
D
O
HOH
3
1.00
1
O
29.33
12.537
9.831
78.921
A
O
HOH
64
HETATM
D
O
HOH
3
1.00
1
O
56.01
8.282
30.796
62.434
A
O
HOH
65
HETATM
D
O
HOH
3
1.00
1
O
62.59
19.356
20.696
84.545
A
O
HOH
67
HETATM
D
O
HOH
3
1.00
1
O
57.71
8.827
28.935
56.792
A
O
HOH
69
HETATM
D
O
HOH
3
1.00
1
O
67.49
3.519
20.777
75.841
A
O
HOH
71
HETATM
D
O
HOH
3
1.00
1
O
56.48
20.693
16.058
76.898
A
O
HOH
74
HETATM
D
O
HOH
3
1.00
1
O
63.24
20.037
19.558
76.919
A
O
HOH
75
HETATM
D
O
HOH
3
1.00
1
O
72.89
17.137
16.864
71.331
A
O
HOH
80
HETATM
D
O
HOH
3
1.00
1
O
55.24
24.031
16.184
79.062
A
O
HOH
81
HETATM
D
O
HOH
3
1.00
1
O
54.30
15.263
13.607
76.510
A
O
HOH
82
HETATM
D
O
HOH
3
1.00
1
O
48.63
12.234
10.893
75.491
A
O
HOH
83
HETATM
D
O
HOH
3
1.00
1
O
66.19
11.045
30.326
62.003
A
O
HOH
86
HETATM
D
O
HOH
3
1.00
1
O
56.41
0.870
15.096
63.358
A
O
HOH
87
HETATM
D
O
HOH
3
1.00
1
O
48.74
12.444
28.963
89.822
A
O
HOH
90
HETATM
D
O
HOH
3
1.00
1
O
65.90
11.758
31.169
55.396
A
O
HOH
91
HETATM
D
O
HOH
3
1.00
1
O
16.45
9.976
9.962
78.828
A
O
HOH
92
HETATM
D
O
HOH
3
1.00
1
O
70.23
11.968
17.554
84.091
A
O
HOH
94
HETATM
D
O
HOH
3
1.00
1
O
50.20
11.037
24.186
48.095
A
O
HOH
97
HETATM
D
O
HOH
3
1.00
1
O
44.01
12.162
20.736
94.813
B
O
HOH
28
HETATM
E
O
HOH
3
1.00
1
O
29.83
16.921
24.847
62.982
B
O
HOH
30
HETATM
E
O
HOH
3
1.00
1
O
41.80
14.313
24.377
62.076
B
O
HOH
32
HETATM
E
O
HOH
3
1.00
1
O
33.30
19.641
9.136
59.526
B
O
HOH
33
HETATM
E
O
HOH
3
1.00
1
O
38.89
9.855
19.535
80.952
B
O
HOH
36
HETATM
E
O
HOH
3
1.00
1
O
41.42
18.983
19.555
96.880
B
O
HOH
39
HETATM
E
O
HOH
3
1.00
1
O
38.65
10.804
7.909
55.581
B
O
HOH
43
HETATM
E
O
HOH
3
1.00
1
O
51.32
11.084
13.339
64.578
B
O
HOH
46
HETATM
E
O
HOH
3
1.00
1
O
33.13
6.646
19.843
89.482
B
O
HOH
48
HETATM
E
O
HOH
3
1.00
1
O
43.81
5.689
7.289
55.413
B
O
HOH
49
HETATM
E
O
HOH
3
1.00
1
O
47.03
16.807
29.957
73.223
B
O
HOH
51
HETATM
E
O
HOH
3
1.00
1
O
62.76
6.360
20.825
92.199
B
O
HOH
55
HETATM
E
O
HOH
3
1.00
1
O
65.46
9.753
12.345
62.204
B
O
HOH
56
HETATM
E
O
HOH
3
1.00
1
O
60.69
15.459
14.556
66.858
B
O
HOH
57
HETATM
E
O
HOH
3
1.00
1
O
48.35
10.065
23.028
91.287
B
O
HOH
58
HETATM
E
O
HOH
3
1.00
1
O
61.75
18.232
25.826
78.351
B
O
HOH
60
HETATM
E
O
HOH
3
1.00
1
O
51.74
7.631
25.219
88.266
B
O
HOH
61
HETATM
E
O
HOH
3
1.00
1
O
50.75
19.008
26.483
62.056
B
O
HOH
62
HETATM
E
O
HOH
3
1.00
1
O
38.23
2.318
23.825
80.611
B
O
HOH
66
HETATM
E
O
HOH
3
1.00
1
O
50.67
5.538
18.553
84.415
B
O
HOH
68
HETATM
E
O
HOH
3
1.00
1
O
79.32
19.733
22.261
74.159
B
O
HOH
70
HETATM
E
O
HOH
3
1.00
1
O
47.53
8.206
17.707
81.803
B
O
HOH
72
HETATM
E
O
HOH
3
1.00
1
O
42.41
2.773
19.452
83.584
B
O
HOH
73
HETATM
E
O
HOH
3
1.00
1
O
66.51
15.663
28.250
80.540
B
O
HOH
76
HETATM
E
O
HOH
3
1.00
1
O
37.71
2.289
18.222
86.650
B
O
HOH
77
HETATM
E
O
HOH
3
1.00
1
O
51.31
4.863
19.439
87.406
B
O
HOH
78
HETATM
E
O
HOH
3
1.00
1
O
51.99
2.492
20.899
85.747
B
O
HOH
79
HETATM
E
O
HOH
3
1.00
1
O
44.16
9.183
12.787
52.562
B
O
HOH
84
HETATM
E
O
HOH
3
1.00
1
O
61.86
22.807
12.310
61.745
B
O
HOH
85
HETATM
E
O
HOH
3
1.00
1
O
63.94
5.237
22.166
89.286
B
O
HOH
88
HETATM
E
O
HOH
3
1.00
1
O
60.87
0.283
15.998
85.978
B
O
HOH
89
HETATM
E
O
HOH
3
1.00
1
O
65.17
12.993
6.616
49.123
B
O
HOH
93
HETATM
E
O
HOH
3
1.00
1
O
49.95
17.025
29.175
77.447
B
O
HOH
95
HETATM
E
O
HOH
3
1.00
1
O
49.76
6.333
9.265
57.827
B
O
HOH
96
HETATM
E
O
HOH
3
1.00
1
O
53.57
13.040
10.734
64.768
B
O
HOH
98
HETATM
E
O
HOH
3
1.00
1
O
0.040355
0.000000
0.000000
0.000000
0.024295
0.000000
0.000000
0.000000
0.015265
0.00000
0.00000
0.00000
Nunn, C.M.
Neidle, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
24.780
41.160
65.510
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
C17 H20 N4 O2
312.366
1,3-BIS(AMIDINOPHENOXY)PROPANE
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
Y
147
N
C
Y
148
N
C
Y
149
N
C
Y
150
N
C
Y
151
N
C
Y
152
N
C
N
153
N
C
N
154
N
N
N
155
N
N
Y
156
N
C
Y
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
N
162
N
C
N
163
N
N
N
164
N
N
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
Y
152
N
doub
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
Y
157
N
doub
N
158
N
sing
Y
159
N
sing
N
160
N
sing
Y
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
Y
169
N
doub
Y
170
N
sing
N
171
N
sing
Y
172
N
sing
N
173
N
sing
Y
174
N
doub
N
175
N
sing
Y
176
N
sing
N
177
N
sing
Y
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
38
2317
2325
10.1021/jm00013a008
7608897
Sequence-dependent drug binding to the minor groove of DNA: crystal structure of the DNA dodecamer d(CGCAAATTTGCG)2 complexed with propamidine.
1995
10.2210/pdb102d/pdb
pdb_0000102d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
289.00
1
AREA DETECTOR
XENTRONICS
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
3662.404
DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')
2
syn
polymer
312.366
1,3-BIS(AMIDINOPHENOXY)PROPANE
1
syn
non-polymer
18.015
water
73
nat
water
no
no
(DC)(DG)(DC)(DA)(DA)(DA)(DT)(DT)(DT)(DG)(DC)(DG)
CGCAAATTTGCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
2.28
46.06
VAPOR DIFFUSION, SITTING DROP
7.00
pH 7.00, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K
277.00
WATER
1
MPD
1
MGCL2
1
NA CACODYLATE
1
WATER
2
MPD
2
2.206
1
19
A
1
B
24
-5.599
A_DC1:DG24_B
1
-9.356
-0.109
0.184
-0.160
4.541
1
19
A
2
B
23
-4.717
A_DG2:DC23_B
2
-8.708
0.019
0.545
-0.290
-5.131
1
19
A
3
B
22
0.629
A_DC3:DG22_B
3
-6.485
0.050
0.134
-0.045
15.404
1
20
A
4
B
21
-2.999
A_DA4:DT21_B
4
-10.654
0.259
-0.268
-0.094
4.838
1
20
A
5
B
20
-1.543
A_DA5:DT20_B
5
-15.845
0.133
-0.128
-0.044
2.228
1
20
A
6
B
19
-4.332
A_DA6:DT19_B
6
-19.128
0.142
0.329
-0.035
-0.167
1
20
A
7
B
18
0.450
A_DT7:DA18_B
7
-18.014
0.015
0.332
-0.031
-0.759
1
20
A
8
B
17
-4.420
A_DT8:DA17_B
8
-16.903
-0.258
-0.166
-0.238
-7.042
1
20
A
9
B
16
-7.743
A_DT9:DA16_B
9
-10.913
-0.357
-0.318
-0.029
7.644
1
19
A
10
B
15
-1.804
A_DG10:DC15_B
10
0.533
0.034
0.299
-0.152
4.338
1
19
A
11
B
14
-0.926
A_DC11:DG14_B
11
-20.209
0.199
0.475
-0.224
0.173
1
19
A
12
B
13
-4.458
A_DG12:DC13_B
12
9.345
-0.186
-0.161
-0.323
3.444
37.511
A
A
1
2
3.823
B
B
24
23
3.460
2.454
-0.082
-0.065
AA_DC1DG2:DC23DG24_BB
1
-3.208
4.997
37.301
-0.441
-0.317
3.667
39.581
A
A
2
3
-5.026
B
B
23
22
3.635
-3.387
0.725
0.275
AA_DG2DC3:DG22DC23_BB
2
6.171
-9.158
38.974
0.853
-0.257
3.053
30.319
A
A
3
4
11.242
B
B
22
21
3.023
5.842
-0.570
0.604
AA_DC3DA4:DT21DG22_BB
3
1.418
-2.727
29.731
0.051
1.358
3.564
34.799
A
A
4
5
2.571
B
B
21
20
3.564
1.537
-0.080
0.094
AA_DA4DA5:DT20DT21_BB
4
-1.824
3.053
34.720
-0.098
-0.169
3.196
41.819
A
A
5
6
2.902
B
B
20
19
3.235
2.069
0.142
-0.386
AA_DA5DA6:DT19DT20_BB
5
-2.940
4.124
41.671
-0.753
-0.503
3.388
27.451
A
A
6
7
0.161
B
B
19
18
3.393
0.076
0.154
-0.802
AA_DA6DT7:DA18DT19_BB
6
-0.492
1.036
27.447
-1.709
-0.451
3.169
37.587
A
A
7
8
2.311
B
B
18
17
3.217
1.487
-0.310
-0.090
AA_DT7DT8:DA17DA18_BB
7
3.613
-5.618
37.391
-0.329
0.941
3.452
39.009
A
A
8
9
-3.085
B
B
17
16
3.487
-2.059
-0.291
0.217
AA_DT8DT9:DA16DA17_BB
8
2.067
-3.099
38.904
0.588
0.701
2.882
34.516
A
A
9
10
-3.454
B
B
16
15
3.102
-2.038
0.645
0.990
AA_DT9DG10:DC15DA16_BB
9
-6.133
10.394
33.924
1.961
-1.964
3.468
38.501
A
A
10
11
-10.641
B
B
15
14
3.577
-6.980
-0.512
0.347
AA_DG10DC11:DG14DC15_BB
10
-0.564
0.860
37.883
1.467
0.701
3.567
39.173
A
A
11
12
-10.821
B
B
14
13
3.735
-7.186
0.328
0.643
AA_DC11DG12:DC13DG14_BB
11
6.467
-9.739
38.006
1.935
0.389
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1995-02-07
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
NDB
1994-12-15
REL
REL
TNT
1,3-BIS(AMIDINOPHENOXY)PROPANE
HOH
water
TNT
25
2
TNT
TNT
25
B
HOH
26
3
HOH
HOH
26
A
HOH
27
3
HOH
HOH
27
A
HOH
29
3
HOH
HOH
29
A
HOH
31
3
HOH
HOH
31
A
HOH
34
3
HOH
HOH
34
A
HOH
35
3
HOH
HOH
35
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
44
3
HOH
HOH
44
A
HOH
45
3
HOH
HOH
45
A
HOH
47
3
HOH
HOH
47
A
HOH
50
3
HOH
HOH
50
A
HOH
52
3
HOH
HOH
52
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
59
3
HOH
HOH
59
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
65
3
HOH
HOH
65
A
HOH
67
3
HOH
HOH
67
A
HOH
69
3
HOH
HOH
69
A
HOH
71
3
HOH
HOH
71
A
HOH
74
3
HOH
HOH
74
A
HOH
75
3
HOH
HOH
75
A
HOH
80
3
HOH
HOH
80
A
HOH
81
3
HOH
HOH
81
A
HOH
82
3
HOH
HOH
82
A
HOH
83
3
HOH
HOH
83
A
HOH
86
3
HOH
HOH
86
A
HOH
87
3
HOH
HOH
87
A
HOH
90
3
HOH
HOH
90
A
HOH
91
3
HOH
HOH
91
A
HOH
92
3
HOH
HOH
92
A
HOH
94
3
HOH
HOH
94
A
HOH
97
3
HOH
HOH
97
A
HOH
28
3
HOH
HOH
28
B
HOH
30
3
HOH
HOH
30
B
HOH
32
3
HOH
HOH
32
B
HOH
33
3
HOH
HOH
33
B
HOH
36
3
HOH
HOH
36
B
HOH
39
3
HOH
HOH
39
B
HOH
43
3
HOH
HOH
43
B
HOH
46
3
HOH
HOH
46
B
HOH
48
3
HOH
HOH
48
B
HOH
49
3
HOH
HOH
49
B
HOH
51
3
HOH
HOH
51
B
HOH
55
3
HOH
HOH
55
B
HOH
56
3
HOH
HOH
56
B
HOH
57
3
HOH
HOH
57
B
HOH
58
3
HOH
HOH
58
B
HOH
60
3
HOH
HOH
60
B
HOH
61
3
HOH
HOH
61
B
HOH
62
3
HOH
HOH
62
B
HOH
66
3
HOH
HOH
66
B
HOH
68
3
HOH
HOH
68
B
HOH
70
3
HOH
HOH
70
B
HOH
72
3
HOH
HOH
72
B
HOH
73
3
HOH
HOH
73
B
HOH
76
3
HOH
HOH
76
B
HOH
77
3
HOH
HOH
77
B
HOH
78
3
HOH
HOH
78
B
HOH
79
3
HOH
HOH
79
B
HOH
84
3
HOH
HOH
84
B
HOH
85
3
HOH
HOH
85
B
HOH
88
3
HOH
HOH
88
B
HOH
89
3
HOH
HOH
89
B
HOH
93
3
HOH
HOH
93
B
HOH
95
3
HOH
HOH
95
B
HOH
96
3
HOH
HOH
96
B
HOH
98
3
HOH
HOH
98
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
A
4
n
4
DA
4
A
A
5
n
5
DA
5
A
A
6
n
6
DA
6
A
T
7
n
7
DT
7
A
T
8
n
8
DT
8
A
T
9
n
9
DT
9
A
G
10
n
10
DG
10
A
C
11
n
11
DC
11
A
G
12
n
12
DG
12
A
C
13
n
1
DC
13
B
G
14
n
2
DG
14
B
C
15
n
3
DC
15
B
A
16
n
4
DA
16
B
A
17
n
5
DA
17
B
A
18
n
6
DA
18
B
T
19
n
7
DT
19
B
T
20
n
8
DT
20
B
T
21
n
9
DT
21
B
G
22
n
10
DG
22
B
C
23
n
11
DC
23
B
G
24
n
12
DG
24
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
5.10
0.60
118.90
124.00
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
1
8.02
1.20
119.70
127.72
A
A
A
C3'
O3'
P
DG
DG
DC
2
2
3
Y
1
5.31
0.70
110.30
115.61
A
A
A
C1'
O4'
C4'
DC
DC
DC
3
3
3
N
1
-6.42
0.80
105.90
99.48
A
A
A
O4'
C1'
C2'
DC
DC
DC
3
3
3
N
1
6.08
0.30
108.30
114.38
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
1
-2.69
0.40
121.90
119.21
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
1
5.94
0.60
118.90
124.84
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
1
-7.03
0.70
121.90
114.87
A
A
A
N3
C2
O2
DC
DC
DC
3
3
3
N
1
-12.53
1.90
104.00
91.47
A
A
A
O3'
P
O5'
DC
DA
DA
3
4
4
Y
1
5.87
0.70
110.30
116.17
A
A
A
C1'
O4'
C4'
DA
DA
DA
4
4
4
N
1
2.98
0.30
108.30
111.28
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
-2.68
0.40
105.80
103.12
A
A
A
C8
N9
C4
DA
DA
DA
4
4
4
N
1
4.25
0.70
110.30
114.55
A
A
A
C1'
O4'
C4'
DA
DA
DA
6
6
6
N
1
-5.21
0.80
105.90
100.69
A
A
A
O4'
C1'
C2'
DA
DA
DA
6
6
6
N
1
4.33
0.50
129.30
133.63
A
A
A
N1
C2
N3
DA
DA
DA
6
6
6
N
1
3.59
0.40
105.80
109.39
A
A
A
N9
C4
C5
DA
DA
DA
6
6
6
N
1
-5.42
0.80
105.90
100.48
A
A
A
O4'
C1'
C2'
DT
DT
DT
7
7
7
N
1
11.31
0.30
108.30
119.61
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
1
-5.55
0.60
122.30
116.75
A
A
A
N3
C2
O2
DT
DT
DT
7
7
7
N
1
4.82
0.60
118.00
122.82
A
A
A
C4
C5
C6
DT
DT
DT
8
8
8
N
1
-4.28
0.60
122.30
118.02
A
A
A
N3
C2
O2
DT
DT
DT
8
8
8
N
1
13.00
1.20
119.70
132.70
A
A
A
C3'
O3'
P
DT
DT
DT
8
8
9
Y
1
-10.16
1.60
120.90
110.74
A
A
A
P
O5'
C5'
DT
DT
DT
9
9
9
N
1
5.43
0.70
110.30
115.73
A
A
A
C1'
O4'
C4'
DT
DT
DT
9
9
9
N
1
-6.07
0.80
105.90
99.83
A
A
A
O4'
C1'
C2'
DT
DT
DT
9
9
9
N
1
3.88
0.60
114.60
118.48
A
A
A
N1
C2
N3
DT
DT
DT
9
9
9
N
1
-5.63
0.60
122.30
116.67
A
A
A
N3
C2
O2
DT
DT
DT
9
9
9
N
1
4.71
0.30
108.30
113.01
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
15.02
1.20
119.70
134.72
A
A
A
C3'
O3'
P
DG
DG
DC
10
10
11
Y
1
-2.53
0.40
121.90
119.37
A
A
A
N3
C4
C5
DC
DC
DC
11
11
11
N
1
7.79
1.10
109.80
117.59
A
A
A
C5'
C4'
O4'
DG
DG
DG
12
12
12
N
1
3.98
0.60
126.00
129.98
A
A
A
N3
C4
N9
DG
DG
DG
12
12
12
N
1
4.64
0.70
118.00
122.64
B
B
B
N3
C4
N4
DC
DC
DC
13
13
13
N
1
4.20
0.70
110.30
114.50
B
B
B
C1'
O4'
C4'
DG
DG
DG
14
14
14
N
1
-5.34
0.80
105.90
100.56
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
1
6.84
0.30
108.30
115.14
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
1
4.28
0.70
110.30
114.58
B
B
B
C1'
O4'
C4'
DC
DC
DC
15
15
15
N
1
-5.82
0.80
105.90
100.08
B
B
B
O4'
C1'
C2'
DC
DC
DC
15
15
15
N
1
4.35
0.30
108.30
112.65
B
B
B
O4'
C1'
N1
DC
DC
DC
15
15
15
N
1
3.64
0.60
118.90
122.54
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
1
-3.91
0.50
129.30
125.39
B
B
B
N1
C2
N3
DA
DA
DA
16
16
16
N
1
4.85
0.50
110.60
115.45
B
B
B
C2
N3
C4
DA
DA
DA
16
16
16
N
1
4.76
0.70
110.30
115.06
B
B
B
C1'
O4'
C4'
DA
DA
DA
17
17
17
N
1
-4.92
0.80
105.90
100.98
B
B
B
O4'
C1'
C2'
DA
DA
DA
17
17
17
N
1
6.51
0.30
108.30
114.81
B
B
B
O4'
C1'
N9
DA
DA
DA
17
17
17
N
1
2.82
0.40
105.80
108.62
B
B
B
N9
C4
C5
DA
DA
DA
17
17
17
N
1
3.54
0.30
108.30
111.84
B
B
B
O4'
C1'
N9
DA
DA
DA
18
18
18
N
1
-9.72
1.60
120.90
111.18
B
B
B
P
O5'
C5'
DT
DT
DT
19
19
19
N
1
6.98
0.30
108.30
115.28
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
1
3.65
0.60
114.60
118.25
B
B
B
N1
C2
N3
DT
DT
DT
19
19
19
N
1
4.35
0.60
118.00
122.35
B
B
B
C4
C5
C6
DT
DT
DT
19
19
19
N
1
4.65
0.70
124.90
129.55
B
B
B
C5
C4
O4
DT
DT
DT
19
19
19
N
1
-4.17
0.60
122.90
118.73
B
B
B
C6
C5
C7
DT
DT
DT
19
19
19
N
1
4.43
0.60
114.60
119.03
B
B
B
N1
C2
N3
DT
DT
DT
21
21
21
N
1
3.96
0.60
118.00
121.96
B
B
B
C4
C5
C6
DT
DT
DT
21
21
21
N
1
-6.13
0.60
122.30
116.17
B
B
B
N3
C2
O2
DT
DT
DT
21
21
21
N
1
-3.04
0.40
104.50
101.46
B
B
B
O4'
C4'
C3'
DG
DG
DG
22
22
22
N
1
-5.63
0.80
102.40
96.77
B
B
B
C3'
C2'
C1'
DG
DG
DG
22
22
22
N
1
4.83
0.30
108.30
113.13
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
1
-3.71
0.50
128.60
124.89
B
B
B
N3
C4
C5
DG
DG
DG
22
22
22
N
1
9.25
0.30
108.30
117.55
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
1
4.11
0.60
118.90
123.01
B
B
B
N1
C2
O2
DC
DC
DC
23
23
23
N
1
5.97
0.70
118.00
123.97
B
B
B
N3
C4
N4
DC
DC
DC
23
23
23
N
1
-5.40
0.70
120.20
114.80
B
B
B
C5
C4
N4
DC
DC
DC
23
23
23
N
1
-11.25
1.80
114.10
102.85
B
B
B
C5'
C4'
C3'
DG
DG
DG
24
24
24
N
1
5.20
0.30
108.30
113.50
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
1
A
A
O3'
C3'
DT
DT
7
7
-0.036
0.006
1.419
1.383
N
1
A
A
C5
C7
DT
DT
7
7
0.048
0.006
1.496
1.544
N
1
B
B
O3'
C3'
DC
DC
13
13
-0.045
0.006
1.419
1.374
N
1
B
B
C3'
C2'
DG
DG
14
14
-0.048
0.008
1.516
1.468
N
1
B
B
C4'
C3'
DA
DA
17
17
-0.084
0.010
1.521
1.437
N
1
B
B
N9
C4
DA
DA
17
17
-0.036
0.006
1.374
1.338
N
1
B
B
C5'
C4'
DG
DG
22
22
0.059
0.007
1.512
1.571
N
0.1550000
0.1550000
2.200
8.000
842
90.800
1
2.000
TR
isotropic
TR
isotropic
2.200
8.000
73
582
23
486
0
0.022
4.00
fix
fix
2.200
102D
12110
3410
0.0530000
1
refinement
X-PLOR
data scaling
XENGEN
SEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINE
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
24
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
24
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
24
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
23
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
23
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
23
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
22
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
22
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
22
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DT
21
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DT
21
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
DT
20
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
DT
20
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
19
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
19
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
18
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
18
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
17
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
17
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
16
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
16
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
15
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
15
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
15
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
14
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
14
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
14
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
13
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
13
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
13
B
N4
DC
1
1_555
DNA
B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA
102D
PDB
1
102D
1
12
102D
1
12
102D
A
1
1
12
13
24
102D
13
24
102D
B
1
1
12
BINDING SITE FOR RESIDUE TNT B 25
B
TNT
25
Software
11
A
DA
6
A
DA
6
11
1_555
A
DT
7
A
DT
7
11
1_555
A
DT
8
A
DT
8
11
1_555
A
DT
9
A
DT
9
11
1_555
A
DG
10
A
DG
10
11
1_555
B
DA
18
B
DA
6
11
1_555
B
DT
19
B
DT
7
11
1_555
B
DT
20
B
DT
8
11
1_555
B
DT
21
B
DT
9
11
1_555
B
HOH
32
E
HOH
11
1_555
B
HOH
36
E
HOH
11
1_555
19
P 21 21 21