0.005811
0.003355
0.000000
0.000000
0.006709
0.000000
0.000000
0.000000
0.012500
0.00000
0.00000
0.00000
RESIDUES 162 - 164 IN WILD-TYPE AND ALL MUTANT LYSOZYMES ARE EXTREMELY MOBILE. THUS THE COORDINATES FOR THESE RESIDUES ARE VERY UNRELIABLE. THIS ENTRY DOES NOT INCLUDE RESIDUES 163 AND 164.
Heinz, D.W.
Matthews, B.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
36
90.00
90.00
120.00
172.100
172.100
80.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
Nature
NATUAS
0006
0028-0836
361
561
564
10.1038/361561a0
8429913
How amino-acid insertions are allowed in an alpha-helix of T4 lysozyme.
1993
10.2210/pdb104l/pdb
pdb_0000104l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
18770.520
T4 LYSOZYME
2
man
polymer
18.015
water
32
nat
water
no
no
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSAAELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGI
LRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTW
DAYKNL
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSAAELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGI
LRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTW
DAYKNL
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
T4-like viruses
Enterobacteria phage T4 sensu lato
sample
10665
Enterobacteria phage T4
PLASMID
M13
3.04
59.49
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Other
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
SHEET
THERE ARE SEVERAL SUBTLE ASPECTS OF THE SECONDARY STRUCTURE
OF THIS MOLECULE WHICH CANNOT CONVENIENTLY BE REPRESENTED
IN THE HELIX AND SHEET RECORDS BELOW. THESE ASPECTS
INFLUENCE THE REPRESENTATION OF HELIX 6 AND STRAND 3 OF
SHEET *S1*. THE PAPER J.MOL.BIOL., V. 118, P. 81, 1978
SHOULD BE CONSULTED FOR THESE SUBTLETIES.
Y
BNL
1992-09-29
REL
REL
HOH
water
HOH
3
2
HOH
HOH
165
A
HOH
4
2
HOH
HOH
166
A
HOH
5
2
HOH
HOH
167
A
HOH
6
2
HOH
HOH
168
A
HOH
7
2
HOH
HOH
169
A
HOH
10
2
HOH
HOH
170
A
HOH
11
2
HOH
HOH
171
A
HOH
12
2
HOH
HOH
172
A
HOH
13
2
HOH
HOH
173
A
HOH
14
2
HOH
HOH
174
A
HOH
15
2
HOH
HOH
175
A
HOH
16
2
HOH
HOH
176
A
HOH
18
2
HOH
HOH
177
A
HOH
19
2
HOH
HOH
178
A
HOH
21
2
HOH
HOH
179
A
HOH
22
2
HOH
HOH
180
A
HOH
23
2
HOH
HOH
181
A
HOH
24
2
HOH
HOH
182
A
HOH
27
2
HOH
HOH
183
A
HOH
28
2
HOH
HOH
184
A
HOH
29
2
HOH
HOH
185
A
HOH
30
2
HOH
HOH
186
A
HOH
32
2
HOH
HOH
187
A
HOH
1
2
HOH
HOH
165
B
HOH
2
2
HOH
HOH
166
B
HOH
8
2
HOH
HOH
167
B
HOH
9
2
HOH
HOH
168
B
HOH
17
2
HOH
HOH
169
B
HOH
20
2
HOH
HOH
170
B
HOH
25
2
HOH
HOH
171
B
HOH
26
2
HOH
HOH
172
B
HOH
31
2
HOH
HOH
173
B
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
ILE
3
n
3
ILE
3
A
PHE
4
n
4
PHE
4
A
GLU
5
n
5
GLU
5
A
MET
6
n
6
MET
6
A
LEU
7
n
7
LEU
7
A
ARG
8
n
8
ARG
8
A
ILE
9
n
9
ILE
9
A
ASP
10
n
10
ASP
10
A
GLU
11
n
11
GLU
11
A
GLY
12
n
12
GLY
12
A
LEU
13
n
13
LEU
13
A
ARG
14
n
14
ARG
14
A
LEU
15
n
15
LEU
15
A
LYS
16
n
16
LYS
16
A
ILE
17
n
17
ILE
17
A
TYR
18
n
18
TYR
18
A
LYS
19
n
19
LYS
19
A
ASP
20
n
20
ASP
20
A
THR
21
n
21
THR
21
A
GLU
22
n
22
GLU
22
A
GLY
23
n
23
GLY
23
A
TYR
24
n
24
TYR
24
A
TYR
25
n
25
TYR
25
A
THR
26
n
26
THR
26
A
ILE
27
n
27
ILE
27
A
GLY
28
n
28
GLY
28
A
ILE
29
n
29
ILE
29
A
GLY
30
n
30
GLY
30
A
HIS
31
n
31
HIS
31
A
LEU
32
n
32
LEU
32
A
LEU
33
n
33
LEU
33
A
THR
34
n
34
THR
34
A
LYS
35
n
35
LYS
35
A
SER
36
n
36
SER
36
A
PRO
37
n
37
PRO
37
A
SER
38
n
38
SER
38
A
LEU
39
n
39
LEU
39
A
ASN
40
n
40
ASN
40
A
ALA
41
n
41
ALA
41
A
ALA
42
n
42
ALA
42
A
LYS
43
n
43
LYS
43
A
SER
44
n
44
SER
44
A
ALA
44
n
45
A
ALA
44
A
ALA
44
n
46
B
ALA
44
A
GLU
45
n
47
GLU
45
A
LEU
46
n
48
LEU
46
A
ASP
47
n
49
ASP
47
A
LYS
48
n
50
LYS
48
A
ALA
49
n
51
ALA
49
A
ILE
50
n
52
ILE
50
A
GLY
51
n
53
GLY
51
A
ARG
52
n
54
ARG
52
A
ASN
53
n
55
ASN
53
A
THR
54
n
56
THR
54
A
ASN
55
n
57
ASN
55
A
GLY
56
n
58
GLY
56
A
VAL
57
n
59
VAL
57
A
ILE
58
n
60
ILE
58
A
THR
59
n
61
THR
59
A
LYS
60
n
62
LYS
60
A
ASP
61
n
63
ASP
61
A
GLU
62
n
64
GLU
62
A
ALA
63
n
65
ALA
63
A
GLU
64
n
66
GLU
64
A
LYS
65
n
67
LYS
65
A
LEU
66
n
68
LEU
66
A
PHE
67
n
69
PHE
67
A
ASN
68
n
70
ASN
68
A
GLN
69
n
71
GLN
69
A
ASP
70
n
72
ASP
70
A
VAL
71
n
73
VAL
71
A
ASP
72
n
74
ASP
72
A
ALA
73
n
75
ALA
73
A
ALA
74
n
76
ALA
74
A
VAL
75
n
77
VAL
75
A
ARG
76
n
78
ARG
76
A
GLY
77
n
79
GLY
77
A
ILE
78
n
80
ILE
78
A
LEU
79
n
81
LEU
79
A
ARG
80
n
82
ARG
80
A
ASN
81
n
83
ASN
81
A
ALA
82
n
84
ALA
82
A
LYS
83
n
85
LYS
83
A
LEU
84
n
86
LEU
84
A
LYS
85
n
87
LYS
85
A
PRO
86
n
88
PRO
86
A
VAL
87
n
89
VAL
87
A
TYR
88
n
90
TYR
88
A
ASP
89
n
91
ASP
89
A
SER
90
n
92
SER
90
A
LEU
91
n
93
LEU
91
A
ASP
92
n
94
ASP
92
A
ALA
93
n
95
ALA
93
A
VAL
94
n
96
VAL
94
A
ARG
95
n
97
ARG
95
A
ARG
96
n
98
ARG
96
A
ALA
97
n
99
ALA
97
A
ALA
98
n
100
ALA
98
A
LEU
99
n
101
LEU
99
A
ILE
100
n
102
ILE
100
A
ASN
101
n
103
ASN
101
A
MET
102
n
104
MET
102
A
VAL
103
n
105
VAL
103
A
PHE
104
n
106
PHE
104
A
GLN
105
n
107
GLN
105
A
MET
106
n
108
MET
106
A
GLY
107
n
109
GLY
107
A
GLU
108
n
110
GLU
108
A
THR
109
n
111
THR
109
A
GLY
110
n
112
GLY
110
A
VAL
111
n
113
VAL
111
A
ALA
112
n
114
ALA
112
A
GLY
113
n
115
GLY
113
A
PHE
114
n
116
PHE
114
A
THR
115
n
117
THR
115
A
ASN
116
n
118
ASN
116
A
SER
117
n
119
SER
117
A
LEU
118
n
120
LEU
118
A
ARG
119
n
121
ARG
119
A
MET
120
n
122
MET
120
A
LEU
121
n
123
LEU
121
A
GLN
122
n
124
GLN
122
A
GLN
123
n
125
GLN
123
A
LYS
124
n
126
LYS
124
A
ARG
125
n
127
ARG
125
A
TRP
126
n
128
TRP
126
A
ASP
127
n
129
ASP
127
A
GLU
128
n
130
GLU
128
A
ALA
129
n
131
ALA
129
A
ALA
130
n
132
ALA
130
A
VAL
131
n
133
VAL
131
A
ASN
132
n
134
ASN
132
A
LEU
133
n
135
LEU
133
A
ALA
134
n
136
ALA
134
A
LYS
135
n
137
LYS
135
A
SER
136
n
138
SER
136
A
ARG
137
n
139
ARG
137
A
TRP
138
n
140
TRP
138
A
TYR
139
n
141
TYR
139
A
ASN
140
n
142
ASN
140
A
GLN
141
n
143
GLN
141
A
THR
142
n
144
THR
142
A
PRO
143
n
145
PRO
143
A
ASN
144
n
146
ASN
144
A
ARG
145
n
147
ARG
145
A
ALA
146
n
148
ALA
146
A
LYS
147
n
149
LYS
147
A
ARG
148
n
150
ARG
148
A
VAL
149
n
151
VAL
149
A
ILE
150
n
152
ILE
150
A
THR
151
n
153
THR
151
A
THR
152
n
154
THR
152
A
PHE
153
n
155
PHE
153
A
ARG
154
n
156
ARG
154
A
THR
155
n
157
THR
155
A
GLY
156
n
158
GLY
156
A
THR
157
n
159
THR
157
A
TRP
158
n
160
TRP
158
A
ASP
159
n
161
ASP
159
A
ALA
160
n
162
ALA
160
A
TYR
161
n
163
TYR
161
A
LYS
162
n
164
LYS
162
A
n
165
163
A
n
166
164
A
MET
1
n
1
MET
1
B
ASN
2
n
2
ASN
2
B
ILE
3
n
3
ILE
3
B
PHE
4
n
4
PHE
4
B
GLU
5
n
5
GLU
5
B
MET
6
n
6
MET
6
B
LEU
7
n
7
LEU
7
B
ARG
8
n
8
ARG
8
B
ILE
9
n
9
ILE
9
B
ASP
10
n
10
ASP
10
B
GLU
11
n
11
GLU
11
B
GLY
12
n
12
GLY
12
B
LEU
13
n
13
LEU
13
B
ARG
14
n
14
ARG
14
B
LEU
15
n
15
LEU
15
B
LYS
16
n
16
LYS
16
B
ILE
17
n
17
ILE
17
B
TYR
18
n
18
TYR
18
B
LYS
19
n
19
LYS
19
B
ASP
20
n
20
ASP
20
B
THR
21
n
21
THR
21
B
GLU
22
n
22
GLU
22
B
GLY
23
n
23
GLY
23
B
TYR
24
n
24
TYR
24
B
TYR
25
n
25
TYR
25
B
THR
26
n
26
THR
26
B
ILE
27
n
27
ILE
27
B
GLY
28
n
28
GLY
28
B
ILE
29
n
29
ILE
29
B
GLY
30
n
30
GLY
30
B
HIS
31
n
31
HIS
31
B
LEU
32
n
32
LEU
32
B
LEU
33
n
33
LEU
33
B
THR
34
n
34
THR
34
B
LYS
35
n
35
LYS
35
B
SER
36
n
36
SER
36
B
PRO
37
n
37
PRO
37
B
SER
38
n
38
SER
38
B
LEU
39
n
39
LEU
39
B
ASN
40
n
40
ASN
40
B
ALA
41
n
41
ALA
41
B
ALA
42
n
42
ALA
42
B
LYS
43
n
43
LYS
43
B
SER
44
n
44
SER
44
B
ALA
44
n
45
A
ALA
44
B
ALA
44
n
46
B
ALA
44
B
GLU
45
n
47
GLU
45
B
LEU
46
n
48
LEU
46
B
ASP
47
n
49
ASP
47
B
LYS
48
n
50
LYS
48
B
ALA
49
n
51
ALA
49
B
ILE
50
n
52
ILE
50
B
GLY
51
n
53
GLY
51
B
ARG
52
n
54
ARG
52
B
ASN
53
n
55
ASN
53
B
THR
54
n
56
THR
54
B
ASN
55
n
57
ASN
55
B
GLY
56
n
58
GLY
56
B
VAL
57
n
59
VAL
57
B
ILE
58
n
60
ILE
58
B
THR
59
n
61
THR
59
B
LYS
60
n
62
LYS
60
B
ASP
61
n
63
ASP
61
B
GLU
62
n
64
GLU
62
B
ALA
63
n
65
ALA
63
B
GLU
64
n
66
GLU
64
B
LYS
65
n
67
LYS
65
B
LEU
66
n
68
LEU
66
B
PHE
67
n
69
PHE
67
B
ASN
68
n
70
ASN
68
B
GLN
69
n
71
GLN
69
B
ASP
70
n
72
ASP
70
B
VAL
71
n
73
VAL
71
B
ASP
72
n
74
ASP
72
B
ALA
73
n
75
ALA
73
B
ALA
74
n
76
ALA
74
B
VAL
75
n
77
VAL
75
B
ARG
76
n
78
ARG
76
B
GLY
77
n
79
GLY
77
B
ILE
78
n
80
ILE
78
B
LEU
79
n
81
LEU
79
B
ARG
80
n
82
ARG
80
B
ASN
81
n
83
ASN
81
B
ALA
82
n
84
ALA
82
B
LYS
83
n
85
LYS
83
B
LEU
84
n
86
LEU
84
B
LYS
85
n
87
LYS
85
B
PRO
86
n
88
PRO
86
B
VAL
87
n
89
VAL
87
B
TYR
88
n
90
TYR
88
B
ASP
89
n
91
ASP
89
B
SER
90
n
92
SER
90
B
LEU
91
n
93
LEU
91
B
ASP
92
n
94
ASP
92
B
ALA
93
n
95
ALA
93
B
VAL
94
n
96
VAL
94
B
ARG
95
n
97
ARG
95
B
ARG
96
n
98
ARG
96
B
ALA
97
n
99
ALA
97
B
ALA
98
n
100
ALA
98
B
LEU
99
n
101
LEU
99
B
ILE
100
n
102
ILE
100
B
ASN
101
n
103
ASN
101
B
MET
102
n
104
MET
102
B
VAL
103
n
105
VAL
103
B
PHE
104
n
106
PHE
104
B
GLN
105
n
107
GLN
105
B
MET
106
n
108
MET
106
B
GLY
107
n
109
GLY
107
B
GLU
108
n
110
GLU
108
B
THR
109
n
111
THR
109
B
GLY
110
n
112
GLY
110
B
VAL
111
n
113
VAL
111
B
ALA
112
n
114
ALA
112
B
GLY
113
n
115
GLY
113
B
PHE
114
n
116
PHE
114
B
THR
115
n
117
THR
115
B
ASN
116
n
118
ASN
116
B
SER
117
n
119
SER
117
B
LEU
118
n
120
LEU
118
B
ARG
119
n
121
ARG
119
B
MET
120
n
122
MET
120
B
LEU
121
n
123
LEU
121
B
GLN
122
n
124
GLN
122
B
GLN
123
n
125
GLN
123
B
LYS
124
n
126
LYS
124
B
ARG
125
n
127
ARG
125
B
TRP
126
n
128
TRP
126
B
ASP
127
n
129
ASP
127
B
GLU
128
n
130
GLU
128
B
ALA
129
n
131
ALA
129
B
ALA
130
n
132
ALA
130
B
VAL
131
n
133
VAL
131
B
ASN
132
n
134
ASN
132
B
LEU
133
n
135
LEU
133
B
ALA
134
n
136
ALA
134
B
LYS
135
n
137
LYS
135
B
SER
136
n
138
SER
136
B
ARG
137
n
139
ARG
137
B
TRP
138
n
140
TRP
138
B
TYR
139
n
141
TYR
139
B
ASN
140
n
142
ASN
140
B
GLN
141
n
143
GLN
141
B
THR
142
n
144
THR
142
B
PRO
143
n
145
PRO
143
B
ASN
144
n
146
ASN
144
B
ARG
145
n
147
ARG
145
B
ALA
146
n
148
ALA
146
B
LYS
147
n
149
LYS
147
B
ARG
148
n
150
ARG
148
B
VAL
149
n
151
VAL
149
B
ILE
150
n
152
ILE
150
B
THR
151
n
153
THR
151
B
THR
152
n
154
THR
152
B
PHE
153
n
155
PHE
153
B
ARG
154
n
156
ARG
154
B
THR
155
n
157
THR
155
B
GLY
156
n
158
GLY
156
B
THR
157
n
159
THR
157
B
TRP
158
n
160
TRP
158
B
ASP
159
n
161
ASP
159
B
ALA
160
n
162
ALA
160
B
TYR
161
n
163
TYR
161
B
LYS
162
n
164
LYS
162
B
n
165
163
B
n
166
164
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
18
A
O
TYR
18
A
N
THR
26
A
N
THR
26
A
N
ILE
27
A
N
ILE
27
A
O
HIS
31
A
O
HIS
31
B
O
TYR
18
B
O
TYR
18
B
N
THR
26
B
N
THR
26
1
A
ASN
163
A
ASN
165
1
Y
1
A
LEU
164
A
LEU
166
1
Y
1
B
ASN
163
B
ASN
165
1
Y
1
B
LEU
164
B
LEU
166
1
Y
1
-5.55
0.90
118.30
112.75
A
A
A
CB
CG
OD2
ASP
ASP
ASP
10
10
10
N
1
-3.75
0.50
120.30
116.55
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
14
14
14
N
1
10.86
1.60
122.70
133.56
A
A
A
O
C
N
ASN
ASN
ALA
40
40
41
Y
1
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD1
ASP
ASP
ASP
47
47
47
N
1
-8.54
1.40
112.40
103.86
A
A
A
CA
CB
CG2
THR
THR
THR
59
59
59
N
1
6.30
0.90
118.30
124.60
A
A
A
CB
CG
OD1
ASP
ASP
ASP
70
70
70
N
1
-6.74
0.90
118.30
111.56
A
A
A
CB
CG
OD2
ASP
ASP
ASP
70
70
70
N
1
-4.54
0.50
120.30
115.76
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
76
76
76
N
1
-8.03
0.90
118.30
110.27
A
A
A
CB
CG
OD1
ASP
ASP
ASP
89
89
89
N
1
6.45
0.90
118.30
124.75
A
A
A
CB
CG
OD2
ASP
ASP
ASP
89
89
89
N
1
-6.26
0.90
118.30
112.04
A
A
A
CB
CG
OD2
ASP
ASP
ASP
92
92
92
N
1
-3.50
0.50
120.30
116.80
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
95
95
95
N
1
-12.55
1.90
110.20
97.65
A
A
A
CB
CA
C
LEU
LEU
LEU
133
133
133
N
1
-10.16
1.40
112.40
102.24
A
A
A
CA
CB
CG2
THR
THR
THR
142
142
142
N
1
3.16
0.50
120.30
123.46
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
154
154
154
N
1
-5.90
0.90
118.30
112.40
B
B
B
CB
CG
OD1
ASP
ASP
ASP
61
61
61
N
1
-5.68
0.90
118.30
112.62
B
B
B
CB
CG
OD1
ASP
ASP
ASP
72
72
72
N
1
3.05
0.50
120.30
123.35
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
80
80
80
N
1
-7.29
0.90
118.30
111.01
B
B
B
CB
CG
OD1
ASP
ASP
ASP
89
89
89
N
1
5.56
0.90
118.30
123.86
B
B
B
CB
CG
OD2
ASP
ASP
ASP
89
89
89
N
1
6.11
0.90
118.30
124.41
B
B
B
CB
CG
OD1
ASP
ASP
ASP
92
92
92
N
1
-8.12
0.90
118.30
110.18
B
B
B
CB
CG
OD2
ASP
ASP
ASP
92
92
92
N
1
-5.92
0.90
118.30
112.38
B
B
B
CB
CG
OD1
ASP
ASP
ASP
127
127
127
N
1
5.62
0.90
118.30
123.92
B
B
B
CB
CG
OD2
ASP
ASP
ASP
127
127
127
N
1
-30.91
2.10
128.40
97.49
B
B
B
C
N
CD
THR
PRO
PRO
142
143
143
Y
1
5.28
0.50
120.30
125.58
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
145
145
145
N
1
-7.33
0.90
118.30
110.97
B
B
B
CB
CG
OD1
ASP
ASP
ASP
159
159
159
N
1
6.75
0.90
118.30
125.05
B
B
B
CB
CG
OD2
ASP
ASP
ASP
159
159
159
N
1
A
A
CD
OE1
GLU
GLU
11
11
0.070
0.011
1.252
1.322
N
1
A
A
CD
OE1
GLU
GLU
45
45
0.071
0.011
1.252
1.323
N
1
A
A
CD
OE2
GLU
GLU
62
62
0.073
0.011
1.252
1.325
N
1
A
A
CD
OE2
GLU
GLU
64
64
0.081
0.011
1.252
1.333
N
1
A
A
CD
OE1
GLU
GLU
108
108
0.066
0.011
1.252
1.318
N
1
A
A
CD
OE2
GLU
GLU
128
128
0.084
0.011
1.252
1.336
N
1
B
B
CD
OE1
GLU
GLU
22
22
0.070
0.011
1.252
1.322
N
1
B
B
CD
OE1
GLU
GLU
45
45
0.069
0.011
1.252
1.321
N
1
B
B
CD
OE1
GLU
GLU
108
108
0.078
0.011
1.252
1.330
N
1
B
B
CD
OE2
GLU
GLU
128
128
0.078
0.011
1.252
1.330
N
1
A
A
NZ
NZ
LYS
LYS
85
85
2.14
1_555
6_556
1
A
ASN
2
172.05
169.16
1
A
ILE
17
-30.75
134.64
1
A
ASP
20
-66.07
-174.02
1
A
ARG
52
160.97
153.21
1
A
ALA
73
-38.75
-37.44
1
A
ILE
78
-23.82
-53.29
1
A
THR
115
-44.36
-80.34
1
A
ARG
119
-68.69
-70.53
1
A
LYS
124
77.86
33.77
1
A
ALA
130
-47.11
-14.06
1
A
LYS
135
-105.98
65.75
1
A
THR
157
-130.32
-150.46
1
B
ILE
17
-38.61
165.00
1
B
TYR
18
168.09
171.80
1
B
GLU
22
-112.55
76.14
1
B
THR
34
174.23
156.84
1
B
SER
38
-42.02
-8.20
1
B
ASP
47
-74.31
24.76
1
B
LYS
48
-127.27
-50.38
1
B
ARG
52
166.98
151.09
1
B
ASN
55
27.81
56.04
1
B
ASP
70
-60.16
-80.77
1
B
VAL
71
-33.70
-36.93
1
B
ARG
76
-43.95
-70.33
1
B
ARG
80
-101.90
48.49
1
B
ASP
92
-67.92
-143.58
1
B
THR
115
-36.28
-83.64
1
B
LYS
124
67.60
-0.86
1
B
LEU
133
-29.46
-44.38
1
B
ARG
154
-48.91
-72.72
1
B
THR
155
-61.10
-79.42
1
B
TRP
158
-50.26
-1.79
RESIDUES 162 - 164 IN WILD-TYPE AND ALL MUTANT LYSOZYMES
ARE EXTREMELY MOBILE. THUS THE COORDINATES FOR THESE
RESIDUES ARE VERY UNRELIABLE. THIS ENTRY DOES NOT INCLUDE
RESIDUES 163 AND 164.
0.1750000
2.8
1
2.8
32
2636
0
0
2604
0.018
2.7
refinement
TNT
HOW AMINO-ACID INSERTIONS ARE ALLOWED IN AN ALPHA-HELIX OF T4 LYSOZYME
1
N
N
1
N
N
2
N
N
2
N
N
A
ASN
2
A
ASN
2
HELX_P
A
GLU
11
A
GLU
11
1
1
10
A
ASN
40
A
ASN
40
HELX_P
A
GLY
51
A
GLY
53
1
2
14
A
THR
59
A
THR
61
HELX_P
A
LEU
79
A
LEU
81
1
3
21
A
LEU
84
A
LEU
86
HELX_P
A
LEU
91
A
LEU
93
1
4
8
A
ASP
92
A
ASP
94
HELX_P
A
GLY
107
A
GLY
109
1
5
16
A
MET
106
A
MET
108
HELX_P
A
GLY
113
A
GLY
115
1
6
8
A
PHE
114
A
PHE
116
HELX_P
A
LEU
121
A
LEU
123
1
7
8
A
ARG
125
A
ARG
127
HELX_P
A
LEU
133
A
LEU
135
1
8
9
A
SER
136
A
SER
138
HELX_P
A
THR
142
A
THR
144
1
9
7
A
THR
142
A
THR
144
HELX_P
A
GLY
156
A
GLY
158
1
10
15
A
TRP
158
A
TRP
160
HELX_P
A
LYS
162
A
LYS
164
5
11
5
B
ASN
2
B
ASN
2
HELX_P
B
GLY
12
B
GLY
12
1
12
11
B
ASN
40
B
ASN
40
HELX_P
B
ILE
50
B
ILE
52
1
13
13
B
THR
59
B
THR
61
HELX_P
B
ARG
80
B
ARG
82
1
14
22
B
LYS
83
B
LYS
85
HELX_P
B
LEU
91
B
LEU
93
1
15
9
B
VAL
94
B
VAL
96
HELX_P
B
GLY
107
B
GLY
109
1
16
14
B
GLY
107
B
GLY
109
HELX_P
B
PHE
114
B
PHE
116
1
17
8
B
PHE
114
B
PHE
116
HELX_P
B
GLN
123
B
GLN
125
1
18
10
B
ASP
127
B
ASP
129
HELX_P
B
ALA
134
B
ALA
136
1
19
8
B
SER
136
B
SER
138
HELX_P
B
THR
142
B
THR
144
1
20
7
B
PRO
143
B
PRO
145
HELX_P
B
THR
155
B
THR
157
1
21
13
B
THR
157
B
THR
159
HELX_P
B
LYS
162
B
LYS
164
5
22
6
HYDROLASE(O-GLYCOSYL)
HYDROLASE(O-GLYCOSYL)
LYS_BPT4
UNP
1
1
P00720
MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILR
NAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA
YKNL
1
164
104L
1
164
P00720
A
1
1
166
1
164
104L
1
164
P00720
B
1
1
166
1
insertion
ALA
44
104L
A
A
P00720
UNP
45
1
insertion
ALA
44
104L
B
A
P00720
UNP
46
1
CYS
conflict
THR
54
104L
A
P00720
UNP
54
56
1
CYS
conflict
ALA
97
104L
A
P00720
UNP
97
99
2
insertion
ALA
44
104L
A
B
P00720
UNP
45
2
insertion
ALA
44
104L
B
B
P00720
UNP
46
2
CYS
conflict
THR
54
104L
B
P00720
UNP
54
56
2
CYS
conflict
ALA
97
104L
B
P00720
UNP
97
99
3
2
anti-parallel
anti-parallel
anti-parallel
A
TYR
18
A
TYR
18
A
LYS
19
A
LYS
19
A
TYR
25
A
TYR
25
A
ILE
27
A
ILE
27
A
HIS
31
A
HIS
31
A
THR
34
A
THR
34
B
TYR
18
B
TYR
18
B
LYS
19
B
LYS
19
B
TYR
25
B
TYR
25
B
THR
26
B
THR
26
155
H 3 2