0.026267
0.000000
0.009592
0.000000
0.030120
0.000000
0.000000
0.000000
0.023083
0.00000
0.00000
0.00000
Harata, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
110.06
90.00
38.070
33.200
46.120
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
49
497
504
10.1107/S0907444993005542
15299509
X-ray structure of monoclinic turkey egg lysozyme at 1.3 A resolution.
1993
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
14228.105
TURKEY EGG WHITE LYSOZYME
3.2.1.17
1
man
polymer
18.015
water
114
nat
water
no
no
KVYGRCELAAAMKRLGLDNYRGYSLGNWVCAAKFESNFNTHATNRNTDGSTDYGILQINSRWWCNDGRTPGSKNLCNIPC
SALLSSDITASVNCAKKIASGGNGMNAWVAWRNRCKGTDVHAWIRGCRL
KVYGRCELAAAMKRLGLDNYRGYSLGNWVCAAKFESNFNTHATNRNTDGSTDYGILQINSRWWCNDGRTPGSKNLCNIPC
SALLSSDITASVNCAKKIASGGNGMNAWVAWRNRCKGTDVHAWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
turkey
EGG WHITE
sample
9103
Meleagris gallopavo
1.92
36.07
pdbx_database_status
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
2005-08-09
SPRSDE
Y
BNL
1993-06-10
REL
REL
HOH
water
HOH
1
2
HOH
HOH
130
A
HOH
2
2
HOH
HOH
131
A
HOH
3
2
HOH
HOH
132
A
HOH
4
2
HOH
HOH
133
A
HOH
5
2
HOH
HOH
134
A
HOH
6
2
HOH
HOH
135
A
HOH
7
2
HOH
HOH
136
A
HOH
8
2
HOH
HOH
137
A
HOH
9
2
HOH
HOH
138
A
HOH
10
2
HOH
HOH
139
A
HOH
11
2
HOH
HOH
140
A
HOH
12
2
HOH
HOH
141
A
HOH
13
2
HOH
HOH
142
A
HOH
14
2
HOH
HOH
143
A
HOH
15
2
HOH
HOH
144
A
HOH
16
2
HOH
HOH
145
A
HOH
17
2
HOH
HOH
146
A
HOH
18
2
HOH
HOH
147
A
HOH
19
2
HOH
HOH
148
A
HOH
20
2
HOH
HOH
149
A
HOH
21
2
HOH
HOH
150
A
HOH
22
2
HOH
HOH
151
A
HOH
23
2
HOH
HOH
152
A
HOH
24
2
HOH
HOH
153
A
HOH
25
2
HOH
HOH
154
A
HOH
26
2
HOH
HOH
155
A
HOH
27
2
HOH
HOH
156
A
HOH
28
2
HOH
HOH
157
A
HOH
29
2
HOH
HOH
158
A
HOH
30
2
HOH
HOH
159
A
HOH
31
2
HOH
HOH
160
A
HOH
32
2
HOH
HOH
161
A
HOH
33
2
HOH
HOH
162
A
HOH
34
2
HOH
HOH
163
A
HOH
35
2
HOH
HOH
164
A
HOH
36
2
HOH
HOH
165
A
HOH
37
2
HOH
HOH
166
A
HOH
38
2
HOH
HOH
167
A
HOH
39
2
HOH
HOH
168
A
HOH
40
2
HOH
HOH
169
A
HOH
41
2
HOH
HOH
170
A
HOH
42
2
HOH
HOH
171
A
HOH
43
2
HOH
HOH
172
A
HOH
44
2
HOH
HOH
173
A
HOH
45
2
HOH
HOH
174
A
HOH
46
2
HOH
HOH
175
A
HOH
47
2
HOH
HOH
176
A
HOH
48
2
HOH
HOH
177
A
HOH
49
2
HOH
HOH
178
A
HOH
50
2
HOH
HOH
179
A
HOH
51
2
HOH
HOH
180
A
HOH
52
2
HOH
HOH
181
A
HOH
53
2
HOH
HOH
182
A
HOH
54
2
HOH
HOH
183
A
HOH
55
2
HOH
HOH
184
A
HOH
56
2
HOH
HOH
185
A
HOH
57
2
HOH
HOH
186
A
HOH
58
2
HOH
HOH
187
A
HOH
59
2
HOH
HOH
188
A
HOH
60
2
HOH
HOH
189
A
HOH
61
2
HOH
HOH
190
A
HOH
62
2
HOH
HOH
191
A
HOH
63
2
HOH
HOH
192
A
HOH
64
2
HOH
HOH
193
A
HOH
65
2
HOH
HOH
194
A
HOH
66
2
HOH
HOH
195
A
HOH
67
2
HOH
HOH
196
A
HOH
68
2
HOH
HOH
197
A
HOH
69
2
HOH
HOH
198
A
HOH
70
2
HOH
HOH
199
A
HOH
71
2
HOH
HOH
200
A
HOH
72
2
HOH
HOH
201
A
HOH
73
2
HOH
HOH
202
A
HOH
74
2
HOH
HOH
203
A
HOH
75
2
HOH
HOH
204
A
HOH
76
2
HOH
HOH
205
A
HOH
77
2
HOH
HOH
206
A
HOH
78
2
HOH
HOH
207
A
HOH
79
2
HOH
HOH
208
A
HOH
80
2
HOH
HOH
209
A
HOH
81
2
HOH
HOH
210
A
HOH
82
2
HOH
HOH
211
A
HOH
83
2
HOH
HOH
212
A
HOH
84
2
HOH
HOH
213
A
HOH
85
2
HOH
HOH
214
A
HOH
86
2
HOH
HOH
215
A
HOH
87
2
HOH
HOH
216
A
HOH
88
2
HOH
HOH
217
A
HOH
89
2
HOH
HOH
218
A
HOH
90
2
HOH
HOH
219
A
HOH
91
2
HOH
HOH
220
A
HOH
92
2
HOH
HOH
221
A
HOH
93
2
HOH
HOH
222
A
HOH
94
2
HOH
HOH
223
A
HOH
95
2
HOH
HOH
224
A
HOH
96
2
HOH
HOH
225
A
HOH
97
2
HOH
HOH
226
A
HOH
98
2
HOH
HOH
227
A
HOH
99
2
HOH
HOH
228
A
HOH
100
2
HOH
HOH
229
A
HOH
101
2
HOH
HOH
230
A
HOH
102
2
HOH
HOH
231
A
HOH
103
2
HOH
HOH
232
A
HOH
104
2
HOH
HOH
233
A
HOH
105
2
HOH
HOH
234
A
HOH
106
2
HOH
HOH
235
A
HOH
107
2
HOH
HOH
236
A
HOH
108
2
HOH
HOH
237
A
HOH
109
2
HOH
HOH
238
A
HOH
110
2
HOH
HOH
239
A
HOH
111
2
HOH
HOH
240
A
HOH
112
2
HOH
HOH
241
A
HOH
113
2
HOH
HOH
242
A
HOH
114
2
HOH
HOH
243
A
LYS
1
n
1
LYS
1
A
VAL
2
n
2
VAL
2
A
TYR
3
n
3
TYR
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
CYS
6
n
6
CYS
6
A
GLU
7
n
7
GLU
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
LEU
15
n
15
LEU
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ASN
19
n
19
ASN
19
A
TYR
20
n
20
TYR
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
SER
24
n
24
SER
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
TRP
28
n
28
TRP
28
A
VAL
29
n
29
VAL
29
A
CYS
30
n
30
CYS
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ASN
39
n
39
ASN
39
A
THR
40
n
40
THR
40
A
HIS
41
n
41
HIS
41
A
ALA
42
n
42
ALA
42
A
THR
43
n
43
THR
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
ASN
46
n
46
ASN
46
A
THR
47
n
47
THR
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
SER
50
n
50
SER
50
A
THR
51
n
51
THR
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
GLY
54
n
54
GLY
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
TRP
62
n
62
TRP
62
A
TRP
63
n
63
TRP
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ARG
68
n
68
ARG
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
LYS
73
n
73
LYS
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
CYS
76
n
76
CYS
76
A
ASN
77
n
77
ASN
77
A
ILE
78
n
78
ILE
78
A
PRO
79
n
79
PRO
79
A
CYS
80
n
80
CYS
80
A
SER
81
n
81
SER
81
A
ALA
82
n
82
ALA
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ASP
87
n
87
ASP
87
A
ILE
88
n
88
ILE
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
SER
91
n
91
SER
91
A
VAL
92
n
92
VAL
92
A
ASN
93
n
93
ASN
93
A
CYS
94
n
94
CYS
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
ALA
99
n
99
ALA
99
A
SER
100
n
100
SER
100
A
GLY
101
n
101
GLY
101
A
GLY
102
n
102
GLY
102
A
ASN
103
n
103
ASN
103
A
GLY
104
n
104
GLY
104
A
MET
105
n
105
MET
105
A
ASN
106
n
106
ASN
106
A
ALA
107
n
107
ALA
107
A
TRP
108
n
108
TRP
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
TRP
111
n
111
TRP
111
A
ARG
112
n
112
ARG
112
A
ASN
113
n
113
ASN
113
A
ARG
114
n
114
ARG
114
A
CYS
115
n
115
CYS
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
THR
118
n
118
THR
118
A
ASP
119
n
119
ASP
119
A
VAL
120
n
120
VAL
120
A
HIS
121
n
121
HIS
121
A
ALA
122
n
122
ALA
122
A
TRP
123
n
123
TRP
123
A
ILE
124
n
124
ILE
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
CYS
127
n
127
CYS
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
3.18
0.50
120.30
123.48
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
5
5
5
N
1
4.03
0.50
120.30
124.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
14
14
14
N
1
-3.37
0.50
120.30
116.93
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
14
14
14
N
1
6.07
0.80
106.30
112.37
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
28
28
28
N
1
-6.49
0.80
107.30
100.81
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
28
28
28
N
1
6.17
0.90
133.90
140.07
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
28
28
28
N
1
-16.21
1.90
110.30
94.09
A
A
A
N
CA
CB
THR
THR
THR
40
40
40
N
1
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
45
45
45
N
1
-3.18
0.50
120.30
117.12
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
45
45
45
N
1
7.55
0.80
106.30
113.85
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
62
62
62
N
1
-10.38
1.30
127.00
116.62
A
A
A
CB
CG
CD1
TRP
TRP
TRP
62
62
62
N
1
-7.10
0.80
107.30
100.20
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
62
62
62
N
1
7.51
0.90
133.90
141.41
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
62
62
62
N
1
6.30
0.80
106.30
112.60
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
63
63
63
N
1
-4.85
0.80
107.30
102.45
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
63
63
63
N
1
12.17
1.60
110.90
123.07
A
A
A
CG1
CB
CG2
VAL
VAL
VAL
92
92
92
N
1
5.81
0.80
106.30
112.11
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
111
111
111
N
1
-15.76
2.20
111.50
95.74
A
A
A
N
CA
CB
VAL
VAL
VAL
120
120
120
N
1
12.23
1.60
110.90
123.13
A
A
A
CG1
CB
CG2
VAL
VAL
VAL
120
120
120
N
1
-4.83
0.80
107.30
102.47
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
123
123
123
N
1
A
A
NE2
CD2
HIS
HIS
41
41
-0.073
0.011
1.373
1.300
N
0.189
0.189
1.30
10.0
1
1.30
10.0
114
1108
0
0
994
0.016
2.9
1.5
2.0
2.0
2.5
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
LYSOZYME (E.C.3.2.1.17)
X-RAY STRUCTURE OF MONOCLINIC TURKEY EGG LYSOZYME AT 1.3 ANGSTROMS RESOLUTION
1
N
N
2
N
N
A
GLY
4
A
GLY
4
HELX_P
A
GLY
16
A
GLY
16
1
H1
13
A
SER
24
A
SER
24
HELX_P
A
SER
36
A
SER
36
1
H2
13
A
PRO
79
A
PRO
79
HELX_P
A
LEU
83
A
LEU
83
5
H3
5
A
ILE
88
A
ILE
88
HELX_P
A
SER
100
A
SER
100
1
H4
13
A
TRP
108
A
TRP
108
HELX_P
A
CYS
115
A
CYS
115
1
H5
8
A
VAL
120
A
VAL
120
HELX_P
A
ARG
125
A
ARG
125
5
H6
6
disulf
2.004
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
127
A
SG
CYS
127
1_555
disulf
2.018
A
CYS
30
A
SG
CYS
30
1_555
A
CYS
115
A
SG
CYS
115
1_555
disulf
2.025
A
CYS
64
A
SG
CYS
64
1_555
A
CYS
80
A
SG
CYS
80
1_555
disulf
1.987
A
CYS
76
A
SG
CYS
76
1_555
A
CYS
94
A
SG
CYS
94
1_555
HYDROLASE(O-GLYCOSYL)
HYDROLASE(O-GLYCOSYL)
LYSC_MELGA
UNP
1
1
P00703
MRSLLILVLCFLPLAALGKVYGRCELAAAMKRLGLDNYRGYSLGNWVCAAKFESNFNTHATNRNTDGSTDYGILQINSRW
WCNDGRTPGSKNLCNIPCSALLSSDITASVNCAKKIASGGNGMNAWVAWRNRCKGTDVHAWIRGCRL
19
147
135L
1
129
P00703
A
1
1
129
2
3
2
anti-parallel
anti-parallel
anti-parallel
parallel
A
LYS
1
A
LYS
1
A
TYR
3
A
TYR
3
A
PHE
38
A
PHE
38
A
THR
40
A
THR
40
A
ALA
42
A
ALA
42
A
ASN
46
A
ASN
46
A
SER
50
A
SER
50
A
GLY
54
A
GLY
54
A
GLN
57
A
GLN
57
A
SER
60
A
SER
60
A
ARG
61
A
ARG
61
A
ASN
65
A
ASN
65
A
LYS
73
A
LYS
73
A
ILE
78
A
ILE
78
4
P 1 21 1