1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Schultze, P. Macaya, R.F. Feigon, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 235 1532 1547 10.1006/jmbi.1994.1105 8107090 Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG). 1994 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 90 3745 Thrombin-Binding DNA Aptamer Forms a Unimolecular Quadruplex Structure in Solution 1993 10.2210/pdb148d/pdb pdb_0000148d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4743.051 DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3') 1 syn polymer no no (DG)(DG)(DT)(DT)(DG)(DG)(DT)(DG)(DT)(DG)(DG)(DT)(DT)(DG)(DG) GGTTGGTGTGGTTGG A polydeoxyribonucleotide n n n n n n n n n n n n n n n -4.136 3 6 A 1 A 6 -90.486 A_DG1:DG6_A 1 -9.408 0.907 0.675 3.694 -19.346 6 A 15 A 10 84.235 A_DG15:DG10_A 2 -2.097 -2.330 1.017 -3.072 20.419 3 6 A 2 A 5 87.476 A_DG2:DG5_A 3 15.637 -1.136 -0.428 -3.642 -0.503 6 A 14 A 11 -96.472 A_DG14:DG11_A 4 0.862 1.084 -0.498 3.491 -3.981 2 13 A 4 A 13 175.946 A_DT4:DT13_A 5 -38.723 2.066 0.889 3.072 -1.459 176.556 A A 1 15 -3.859 A A 6 10 -1.466 -7.715 -0.888 -2.591 AA_DG1DG15:DG10DG6_AA 1 -9.137 4.571 176.537 -1.298 0.446 0.035 179.935 A A 15 2 39.862 A A 10 5 0.051 79.724 -1.119 -2.987 AA_DG15DG2:DG5DG10_AA 2 150.196 -75.098 179.255 -1.494 0.560 0.809 -179.895 A A 2 14 2.071 A A 5 11 0.809 -4.142 1.304 3.543 AA_DG2DG14:DG11DG5_AA 3 11.689 5.845 -179.894 -1.772 0.652 -0.596 172.706 A A 14 4 84.340 A A 11 13 1.308 162.604 -2.261 -0.001 AA_DG14DT4:DT13DG11_AA 4 58.038 -30.104 13.988 -0.298 1.239 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1994-04-30 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1993-11-15 REL CHEMICALLY SYNTHESIZED sample target function 20 12 .0023 M 0.11M 6.1 K STEP (1) SUBSTRUCTURE EMBEDDING ON 20 STRUCTURES STEP (2) TEMPLATE FITTING AND REGULARIZATION BY SIMULATED ANNEALING (20 STRUCTURES) STEP (3) SIMULATED ANNEALING AND ENERGY MINIMIZATION (20 STRUCTURES) STEP (4) RELAXATION MATRIX REFINEMENT ON THE BEST 6 OF 20 STRUCTURES THIS PROCEDURE WAS CARRIED OUT SEPARATELY WITH DISTANCE RESTRAINTS ENFORCING HYDROGEN BONDING BETWEEN T4 AND T13 INVOLVING O2 ATOMS IN ONE CASE (MODELS 1-6) AND O4 ATOMS IN THE OTHER (MODELS 7-12). ALL MODELS WERE SUPERIMPOSED ON MODEL 1, USING ALL NON-HYDROGEN ATOMS OF G1, G2, G5, G6, G10, G11, G14, G15; I.E., ALL G RESIDUES PARTICIPATING IN TETRAD FORMATION. SIMULATED ANNEALING, MATRIX RELAXATION 1 closest to the average H2O/D2O G 1 n 1 DG 1 A G 2 n 2 DG 2 A T 3 n 3 DT 3 A T 4 n 4 DT 4 A G 5 n 5 DG 5 A G 6 n 6 DG 6 A T 7 n 7 DT 7 A G 8 n 8 DG 8 A T 9 n 9 DT 9 A G 10 n 10 DG 10 A G 11 n 11 DG 11 A T 12 n 12 DT 12 A T 13 n 13 DT 13 A G 14 n 14 DG 14 A G 15 n 15 DG 15 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 6 A C4' DG 8 PLANAR 1 6.72 0.30 108.30 115.02 A A A O4' C1' N9 DG DG DG 1 1 1 N 1 3.33 0.50 113.10 116.43 A A A N7 C8 N9 DG DG DG 1 1 1 N 1 7.58 1.20 119.70 127.28 A A A C3' O3' P DG DG DT 2 2 3 Y 1 4.77 0.30 108.30 113.07 A A A O4' C1' N1 DT DT DT 3 3 3 N 1 -4.32 0.60 122.90 118.58 A A A C6 C5 C7 DT DT DT 3 3 3 N 1 6.78 1.10 109.80 116.58 A A A C5' C4' O4' DT DT DT 4 4 4 N 1 -6.25 0.80 105.90 99.65 A A A O4' C1' C2' DT DT DT 4 4 4 N 1 -5.22 0.80 102.40 97.18 A A A C3' C2' C1' DG DG DG 5 5 5 N 1 3.25 0.50 113.10 116.35 A A A N7 C8 N9 DG DG DG 5 5 5 N 1 -6.46 0.70 102.20 95.74 A A A C4' C3' C2' DG DG DG 6 6 6 N 1 -7.27 0.80 105.90 98.63 A A A O4' C1' C2' DG DG DG 6 6 6 N 1 2.62 0.30 108.30 110.92 A A A O4' C1' N9 DG DG DG 6 6 6 N 1 3.53 0.50 113.10 116.63 A A A N7 C8 N9 DG DG DG 6 6 6 N 1 -16.71 1.90 104.00 87.29 A A A O3' P O5' DG DT DT 6 7 7 Y 1 4.18 0.60 106.00 110.18 A A A O4' C4' C3' DT DT DT 7 7 7 N 1 -4.97 0.70 102.20 97.23 A A A C4' C3' C2' DT DT DT 7 7 7 N 1 12.85 1.10 109.80 122.65 A A A C5' C4' O4' DG DG DG 8 8 8 N 1 -4.94 0.70 102.20 97.26 A A A C4' C3' C2' DG DG DG 8 8 8 N 1 7.57 1.20 102.50 110.07 A A A C3' C2' C1' DG DG DG 8 8 8 N 1 -6.84 0.80 105.90 99.06 A A A O4' C1' C2' DG DG DG 8 8 8 N 1 -12.92 1.90 112.60 99.68 A A A N9 C1' C2' DG DG DG 8 8 8 N 1 -4.83 0.70 108.00 103.17 A A A O4' C1' N9 DG DG DG 8 8 8 N 1 -3.40 0.50 104.30 100.90 A A A C5 N7 C8 DG DG DG 8 8 8 N 1 4.56 0.50 113.10 117.66 A A A N7 C8 N9 DG DG DG 8 8 8 N 1 9.70 1.60 120.90 130.60 A A A P O5' C5' DT DT DT 9 9 9 N 1 -4.16 0.40 104.50 100.34 A A A O4' C4' C3' DT DT DT 9 9 9 N 1 4.59 0.70 110.30 114.89 A A A C1' O4' C4' DT DT DT 9 9 9 N 1 2.26 0.30 108.30 110.56 A A A O4' C1' N1 DT DT DT 9 9 9 N 1 -4.33 0.60 122.90 118.57 A A A C6 C5 C7 DT DT DT 9 9 9 N 1 -3.25 0.50 104.30 101.05 A A A C5 N7 C8 DG DG DG 11 11 11 N 1 3.56 0.50 113.10 116.66 A A A N7 C8 N9 DG DG DG 11 11 11 N 1 6.99 0.30 108.30 115.29 A A A O4' C1' N1 DT DT DT 12 12 12 N 1 5.48 0.30 108.30 113.78 A A A O4' C1' N1 DT DT DT 13 13 13 N 1 4.19 0.30 108.30 112.49 A A A O4' C1' N9 DG DG DG 15 15 15 N 1 3.18 0.50 113.10 116.28 A A A N7 C8 N9 DG DG DG 15 15 15 N 1 -2.42 0.40 106.40 103.98 A A A C8 N9 C4 DG DG DG 15 15 15 N 2 3.50 0.30 108.30 111.80 A A A O4' C1' N9 DG DG DG 1 1 1 N 2 3.49 0.50 113.10 116.59 A A A N7 C8 N9 DG DG DG 1 1 1 N 2 3.35 0.50 113.10 116.45 A A A N7 C8 N9 DG DG DG 2 2 2 N 2 3.11 0.30 108.30 111.41 A A A O4' C1' N1 DT DT DT 3 3 3 N 2 -3.67 0.60 122.90 119.23 A A A C6 C5 C7 DT DT DT 3 3 3 N 2 10.28 1.10 109.80 120.08 A A A C5' C4' O4' DT DT DT 4 4 4 N 2 -7.09 0.80 105.90 98.81 A A A O4' C1' C2' DT DT DT 4 4 4 N 2 -3.46 0.40 104.50 101.04 A A A O4' C4' C3' DG DG DG 5 5 5 N 2 7.43 1.20 115.70 123.13 A A A C5' C4' C3' DG DG DG 5 5 5 N 2 -5.28 0.70 108.00 102.72 A A A O4' C1' N9 DG DG DG 5 5 5 N 2 3.61 0.50 113.10 116.71 A A A N7 C8 N9 DG DG DG 5 5 5 N 2 7.68 1.10 109.80 117.48 A A A C5' C4' O4' DG DG DG 6 6 6 N 2 -5.89 0.80 105.90 100.01 A A A O4' C1' C2' DG DG DG 6 6 6 N 2 6.23 0.30 108.30 114.53 A A A O4' C1' N9 DG DG DG 6 6 6 N 2 3.99 0.50 113.10 117.09 A A A N7 C8 N9 DG DG DG 6 6 6 N 2 -16.17 1.90 104.00 87.83 A A A O3' P O5' DG DT DT 6 7 7 Y 2 3.87 0.60 106.00 109.87 A A A O4' C4' C3' DT DT DT 7 7 7 N 2 -5.84 0.70 102.20 96.36 A A A C4' C3' C2' DT DT DT 7 7 7 N 2 4.49 0.60 106.00 110.49 A A A O4' C4' C3' DG DG DG 8 8 8 N 2 14.71 1.10 109.80 124.51 A A A C5' C4' O4' DG DG DG 8 8 8 N 2 -6.43 0.70 102.20 95.77 A A A C4' C3' C2' DG DG DG 8 8 8 N 2 10.37 1.20 102.50 112.87 A A A C3' C2' C1' DG DG DG 8 8 8 N 2 -8.97 0.80 105.90 96.93 A A A O4' C1' C2' DG DG DG 8 8 8 N 2 -11.80 1.90 112.60 100.80 A A A N9 C1' C2' DG DG DG 8 8 8 N 2 3.62 0.50 113.10 116.72 A A A N7 C8 N9 DG DG DG 8 8 8 N 2 -5.07 0.40 104.50 99.43 A A A O4' C4' C3' DT DT DT 9 9 9 N 2 2.98 0.30 108.30 111.28 A A A O4' C1' N1 DT DT DT 9 9 9 N 2 -4.57 0.60 122.90 118.33 A A A C6 C5 C7 DT DT DT 9 9 9 N 2 2.29 0.30 108.30 110.59 A A A O4' C1' N9 DG DG DG 10 10 10 N 2 9.09 0.30 108.30 117.39 A A A O4' C1' N1 DT DT DT 12 12 12 N 2 3.48 0.30 108.30 111.78 A A A O4' C1' N1 DT DT DT 13 13 13 N 2 -4.35 0.60 122.90 118.55 A A A C6 C5 C7 DT DT DT 13 13 13 N 2 3.32 0.30 108.30 111.62 A A A O4' C1' N9 DG DG DG 15 15 15 N 3 4.20 0.30 108.30 112.50 A A A O4' C1' N9 DG DG DG 1 1 1 N 3 3.38 0.50 113.10 116.48 A A A N7 C8 N9 DG DG DG 1 1 1 N 3 3.40 0.50 113.10 116.50 A A A N7 C8 N9 DG DG DG 2 2 2 N 3 2.51 0.30 108.30 110.81 A A A O4' C1' N1 DT DT DT 3 3 3 N 3 -3.98 0.60 122.90 118.92 A A A C6 C5 C7 DT DT DT 3 3 3 N 3 8.09 1.10 109.80 117.89 A A A C5' C4' O4' DT DT DT 4 4 4 N 3 -6.34 0.80 105.90 99.56 A A A O4' C1' C2' DT DT DT 4 4 4 N 3 3.12 0.50 113.10 116.22 A A A N7 C8 N9 DG DG DG 5 5 5 N 3 8.43 1.20 119.70 128.13 A A A C3' O3' P DG DG DG 5 5 6 Y 3 4.28 0.60 106.00 110.28 A A A O4' C4' C3' DG DG DG 6 6 6 N 3 -5.38 0.70 102.20 96.82 A A A C4' C3' C2' DG DG DG 6 6 6 N 3 -6.24 0.80 105.90 99.66 A A A O4' C1' C2' DG DG DG 6 6 6 N 3 7.55 0.30 108.30 115.85 A A A O4' C1' N9 DG DG DG 6 6 6 N 3 4.16 0.50 113.10 117.26 A A A N7 C8 N9 DG DG DG 6 6 6 N 3 -12.80 1.90 104.00 91.20 A A A O3' P O5' DG DT DT 6 7 7 Y 3 4.40 0.60 106.00 110.40 A A A O4' C4' C3' DT DT DT 7 7 7 N 3 -5.37 0.70 102.20 96.83 A A A C4' C3' C2' DT DT DT 7 7 7 N 3 4.52 0.60 106.00 110.52 A A A O4' C4' C3' DG DG DG 8 8 8 N 3 14.69 1.10 109.80 124.49 A A A C5' C4' O4' DG DG DG 8 8 8 N 3 -5.08 0.70 102.20 97.12 A A A C4' C3' C2' DG DG DG 8 8 8 N 3 8.88 1.20 102.50 111.38 A A A C3' C2' C1' DG DG DG 8 8 8 N 3 -7.19 0.80 105.90 98.71 A A A O4' C1' C2' DG DG DG 8 8 8 N 3 -11.56 1.90 112.60 101.04 A A A N9 C1' C2' DG DG DG 8 8 8 N 3 -4.55 0.70 108.00 103.45 A A A O4' C1' N9 DG DG DG 8 8 8 N 3 -3.11 0.50 104.30 101.19 A A A C5 N7 C8 DG DG DG 8 8 8 N 3 4.46 0.50 113.10 117.56 A A A N7 C8 N9 DG DG DG 8 8 8 N 3 -4.14 0.40 104.50 100.36 A A A O4' C4' C3' DT DT DT 9 9 9 N 3 4.72 0.70 110.30 115.02 A A A C1' O4' C4' DT DT DT 9 9 9 N 3 -5.04 0.80 105.90 100.86 A A A O4' C1' C2' DT DT DT 9 9 9 N 3 1.83 0.30 108.30 110.13 A A A O4' C1' N1 DT DT DT 9 9 9 N 3 7.48 0.30 108.30 115.78 A A A O4' C1' N1 DT DT DT 12 12 12 N 3 7.12 0.30 108.30 115.42 A A A O4' C1' N1 DT DT DT 13 13 13 N 3 -3.70 0.60 122.90 119.20 A A A C6 C5 C7 DT DT DT 13 13 13 N 3 3.03 0.50 113.10 116.13 A A A N7 C8 N9 DG DG DG 14 14 14 N 3 3.55 0.30 108.30 111.85 A A A O4' C1' N9 DG DG DG 15 15 15 N 4 2.61 0.30 108.30 110.91 A A A O4' C1' N9 DG DG DG 1 1 1 N 4 3.53 0.50 113.10 116.63 A A A N7 C8 N9 DG DG DG 1 1 1 N 4 3.44 0.50 113.10 116.54 A A A N7 C8 N9 DG DG DG 2 2 2 N 4 7.67 1.20 119.70 127.37 A A A C3' O3' P DG DG DT 2 2 3 Y 4 2.50 0.30 108.30 110.80 A A A O4' C1' N1 DT DT DT 3 3 3 N 4 9.36 1.10 109.80 119.16 A A A C5' C4' O4' DT DT DT 4 4 4 N 4 -7.15 0.80 105.90 98.75 A A A O4' C1' C2' DT DT DT 4 4 4 N 4 7.46 1.20 119.70 127.16 A A A C3' O3' P DT DT DG 4 4 5 Y 4 -2.53 0.40 104.50 101.97 A A A O4' C4' C3' DG DG DG 5 5 5 N 4 3.82 0.50 113.10 116.92 A A A N7 C8 N9 DG DG DG 5 5 5 N 4 9.74 1.10 109.80 119.54 A A A C5' C4' O4' DG DG DG 6 6 6 N 4 -5.64 0.80 105.90 100.26 A A A O4' C1' C2' DG DG DG 6 6 6 N 4 5.62 0.30 108.30 113.92 A A A O4' C1' N9 DG DG DG 6 6 6 N 4 3.84 0.50 113.10 116.94 A A A N7 C8 N9 DG DG DG 6 6 6 N 4 -14.41 1.90 104.00 89.59 A A A O3' P O5' DG DT DT 6 7 7 Y 4 4.09 0.60 106.00 110.09 A A A O4' C4' C3' DT DT DT 7 7 7 N 4 -5.98 0.70 102.20 96.22 A A A C4' C3' C2' DT DT DT 7 7 7 N 4 3.90 0.60 106.00 109.90 A A A O4' C4' C3' DG DG DG 8 8 8 N 4 13.81 1.10 109.80 123.61 A A A C5' C4' O4' DG DG DG 8 8 8 N 4 -6.89 0.70 102.20 95.31 A A A C4' C3' C2' DG DG DG 8 8 8 N 4 10.04 1.20 102.50 112.54 A A A C3' C2' C1' DG DG DG 8 8 8 N 4 -8.94 0.80 105.90 96.96 A A A O4' C1' C2' DG DG DG 8 8 8 N 4 -11.67 1.90 112.60 100.93 A A A N9 C1' C2' DG DG DG 8 8 8 N 4 4.18 0.50 113.10 117.28 A A A N7 C8 N9 DG DG DG 8 8 8 N 4 -5.19 0.40 104.50 99.31 A A A O4' C4' C3' DT DT DT 9 9 9 N 4 3.34 0.30 108.30 111.64 A A A O4' C1' N1 DT DT DT 9 9 9 N 4 -4.48 0.60 122.90 118.43 A A A C6 C5 C7 DT DT DT 9 9 9 N 4 3.01 0.50 113.10 116.11 A A A N7 C8 N9 DG DG DG 10 10 10 N 4 -4.49 0.70 102.20 97.71 A A A C4' C3' C2' DT DT DT 12 12 12 N 4 7.80 0.30 108.30 116.10 A A A O4' C1' N1 DT DT DT 12 12 12 N 4 6.08 0.30 108.30 114.38 A A A O4' C1' N1 DT DT DT 13 13 13 N 4 -3.84 0.60 122.90 119.06 A A A C6 C5 C7 DT DT DT 13 13 13 N 4 3.04 0.50 113.10 116.14 A A A N7 C8 N9 DG DG DG 14 14 14 N 4 4.48 0.30 108.30 112.78 A A A O4' C1' N9 DG DG DG 15 15 15 N 5 7.45 0.30 108.30 115.75 A A A O4' C1' N9 DG DG DG 1 1 1 N 5 3.49 0.50 113.10 116.59 A A A N7 C8 N9 DG DG DG 1 1 1 N 5 3.05 0.50 113.10 116.15 A A A N7 C8 N9 DG DG DG 2 2 2 N 5 -5.59 0.80 102.40 96.81 A A A C3' C2' C1' DG DG DG 5 5 5 N 5 3.94 0.50 113.10 117.04 A A A N7 C8 N9 DG DG DG 5 5 5 N 5 7.25 1.20 119.70 126.95 A A A C3' O3' P DG DG DG 5 5 6 Y 5 -5.00 0.70 102.20 97.20 A A A C4' C3' C2' DG DG DG 6 6 6 N 5 -9.00 0.80 105.90 96.90 A A A O4' C1' C2' DG DG DG 6 6 6 N 5 -3.28 0.50 104.30 101.02 A A A C5 N7 C8 DG DG DG 6 6 6 N 5 4.07 0.50 113.10 117.17 A A A N7 C8 N9 DG DG DG 6 6 6 N 5 -14.12 1.90 104.00 89.88 A A A O3' P O5' DG DT DT 6 7 7 Y 5 -5.23 0.70 108.00 102.77 A A A O4' C1' N1 DT DT DT 7 7 7 N 5 4.68 0.60 106.00 110.68 A A A O4' C4' C3' DG DG DG 8 8 8 N 5 11.55 1.20 115.70 127.25 A A A C5' C4' C3' DG DG DG 8 8 8 N 5 9.92 1.10 109.80 119.72 A A A C5' C4' O4' DG DG DG 8 8 8 N 5 8.74 1.20 102.50 111.24 A A A C3' C2' C1' DG DG DG 8 8 8 N 5 -5.76 0.80 105.90 100.14 A A A O4' C1' C2' DG DG DG 8 8 8 N 5 -6.92 0.70 108.00 101.08 A A A O4' C1' N9 DG DG DG 8 8 8 N 5 3.86 0.50 113.10 116.96 A A A N7 C8 N9 DG DG DG 8 8 8 N 5 2.16 0.30 108.30 110.46 A A A O4' C1' N1 DT DT DT 9 9 9 N 5 -3.91 0.60 122.90 118.99 A A A C6 C5 C7 DT DT DT 9 9 9 N 5 2.50 0.30 108.30 110.80 A A A O4' C1' N9 DG DG DG 10 10 10 N 5 5.79 0.30 108.30 114.09 A A A O4' C1' N1 DT DT DT 12 12 12 N 5 5.58 0.30 108.30 113.88 A A A O4' C1' N1 DT DT DT 13 13 13 N 5 2.49 0.30 108.30 110.79 A A A O4' C1' N9 DG DG DG 14 14 14 N 5 3.38 0.30 108.30 111.68 A A A O4' C1' N9 DG DG DG 15 15 15 N 5 3.12 0.50 113.10 116.22 A A A N7 C8 N9 DG DG DG 15 15 15 N 6 6.15 0.30 108.30 114.45 A A A O4' C1' N9 DG DG DG 1 1 1 N 6 3.45 0.50 113.10 116.55 A A A N7 C8 N9 DG DG DG 1 1 1 N 6 3.04 0.50 113.10 116.14 A A A N7 C8 N9 DG DG DG 2 2 2 N 6 4.45 0.30 108.30 112.75 A A A O4' C1' N1 DT DT DT 3 3 3 N 6 9.33 1.10 109.80 119.13 A A A C5' C4' O4' DT DT DT 4 4 4 N 6 -6.05 0.80 105.90 99.85 A A A O4' C1' C2' DT DT DT 4 4 4 N 6 7.85 1.20 115.70 123.55 A A A C5' C4' C3' DG DG DG 5 5 5 N 6 3.36 0.50 113.10 116.46 A A A N7 C8 N9 DG DG DG 5 5 5 N 6 4.68 0.60 106.00 110.68 A A A O4' C4' C3' DG DG DG 6 6 6 N 6 -5.66 0.70 102.20 96.54 A A A C4' C3' C2' DG DG DG 6 6 6 N 6 -4.94 0.80 105.90 100.96 A A A O4' C1' C2' DG DG DG 6 6 6 N 6 4.34 0.50 113.10 117.44 A A A N7 C8 N9 DG DG DG 6 6 6 N 6 4.52 0.60 106.00 110.52 A A A O4' C4' C3' DT DT DT 7 7 7 N 6 -5.69 0.70 102.20 96.51 A A A C4' C3' C2' DT DT DT 7 7 7 N 6 6.66 0.60 106.00 112.66 A A A O4' C4' C3' DG DG DG 8 8 8 N 6 11.69 1.20 115.70 127.39 A A A C5' C4' C3' DG DG DG 8 8 8 N 6 9.15 1.10 109.80 118.95 A A A C5' C4' O4' DG DG DG 8 8 8 N 6 -5.70 0.70 102.20 96.50 A A A C4' C3' C2' DG DG DG 8 8 8 N 6 8.85 1.20 102.50 111.35 A A A C3' C2' C1' DG DG DG 8 8 8 N 6 -4.86 0.80 105.90 101.04 A A A O4' C1' C2' DG DG DG 8 8 8 N 6 -13.17 1.90 112.60 99.43 A A A N9 C1' C2' DG DG DG 8 8 8 N 6 -5.07 0.70 108.00 102.93 A A A O4' C1' N9 DG DG DG 8 8 8 N 6 3.84 0.50 113.10 116.94 A A A N7 C8 N9 DG DG DG 8 8 8 N 6 -5.61 0.80 109.40 103.79 A A A O5' C5' C4' DT DT DT 9 9 9 N 6 10.55 1.60 120.90 131.45 A A A P O5' C5' DT DT DT 9 9 9 N 6 7.23 1.20 115.70 122.93 A A A C5' C4' C3' DT DT DT 9 9 9 N 6 3.06 0.30 108.30 111.36 A A A O4' C1' N1 DT DT DT 9 9 9 N 6 3.83 0.60 119.00 122.83 A A A C4 C5 C7 DT DT DT 9 9 9 N 6 -6.11 0.60 122.90 116.79 A A A C6 C5 C7 DT DT DT 9 9 9 N 6 7.29 0.30 108.30 115.59 A A A O4' C1' N1 DT DT DT 12 12 12 N 6 5.09 0.30 108.30 113.39 A A A O4' C1' N1 DT DT DT 13 13 13 N 6 -3.91 0.60 122.90 118.99 A A A C6 C5 C7 DT DT DT 13 13 13 N 6 2.08 0.30 108.30 110.38 A A A O4' C1' N9 DG DG DG 14 14 14 N 6 3.05 0.50 113.10 116.15 A A A N7 C8 N9 DG DG DG 14 14 14 N 6 4.05 0.30 108.30 112.35 A A A O4' C1' N9 DG DG DG 15 15 15 N 7 5.71 0.30 108.30 114.01 A A A O4' C1' N9 DG DG DG 1 1 1 N 7 3.41 0.50 113.10 116.51 A A A N7 C8 N9 DG DG DG 1 1 1 N 7 3.42 0.50 113.10 116.52 A A A N7 C8 N9 DG DG DG 2 2 2 N 7 -3.72 0.60 122.90 119.18 A A A C6 C5 C7 DT DT DT 3 3 3 N 7 8.06 1.10 109.80 117.86 A A A C5' C4' O4' DT DT DT 4 4 4 N 7 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C5' C4' C3' DG DG DG 10 10 10 N 7 -5.22 0.80 102.40 97.18 A A A C3' C2' C1' DG DG DG 10 10 10 N 7 3.20 0.50 113.10 116.30 A A A N7 C8 N9 DG DG DG 10 10 10 N 7 8.99 0.30 108.30 117.29 A A A O4' C1' N1 DT DT DT 12 12 12 N 7 2.28 0.30 108.30 110.58 A A A O4' C1' N1 DT DT DT 13 13 13 N 7 -3.91 0.60 122.90 118.99 A A A C6 C5 C7 DT DT DT 13 13 13 N 7 3.01 0.50 113.10 116.11 A A A N7 C8 N9 DG DG DG 14 14 14 N 7 5.93 0.30 108.30 114.23 A A A O4' C1' N9 DG DG DG 15 15 15 N 8 6.57 0.30 108.30 114.87 A A A O4' C1' N9 DG DG DG 1 1 1 N 8 3.61 0.50 113.10 116.71 A A A N7 C8 N9 DG DG DG 1 1 1 N 8 5.45 0.30 108.30 113.75 A A A O4' C1' N1 DT DT DT 3 3 3 N 8 -4.29 0.60 122.90 118.61 A A A C6 C5 C7 DT DT DT 4 4 4 N 8 -3.31 0.50 104.30 100.99 A A A C5 N7 C8 DG DG DG 5 5 5 N 8 4.25 0.50 113.10 117.35 A A A N7 C8 N9 DG DG DG 5 5 5 N 8 1.84 0.30 108.30 110.14 A A A O4' C1' N9 DG DG DG 6 6 6 N 8 3.69 0.50 113.10 116.79 A A A N7 C8 N9 DG DG DG 6 6 6 N 8 4.66 0.60 106.00 110.66 A A A O4' C4' C3' DT DT DT 7 7 7 N 8 -6.63 0.70 102.20 95.57 A A A C4' C3' C2' DT DT DT 7 7 7 N 8 -5.10 0.70 108.00 102.90 A A A O4' C1' N1 DT DT DT 7 7 7 N 8 6.15 0.60 106.00 112.15 A A A O4' C4' C3' DG DG DG 8 8 8 N 8 8.58 1.20 115.70 124.28 A A A C5' C4' C3' DG DG DG 8 8 8 N 8 11.77 1.10 109.80 121.57 A A A C5' C4' O4' DG DG DG 8 8 8 N 8 -7.75 0.70 102.20 94.45 A A A C4' C3' C2' DG DG DG 8 8 8 N 8 11.14 1.20 102.50 113.64 A A A C3' C2' C1' DG DG DG 8 8 8 N 8 -7.84 0.80 105.90 98.06 A A A O4' C1' C2' DG DG DG 8 8 8 N 8 -12.79 1.90 112.60 99.81 A A A N9 C1' C2' DG DG DG 8 8 8 N 8 -5.47 0.70 108.00 102.53 A A A O4' C1' N9 DG DG DG 8 8 8 N 8 4.81 0.50 113.10 117.91 A A A N7 C8 N9 DG DG DG 8 8 8 N 8 -3.16 0.40 106.40 103.24 A A A C8 N9 C4 DG DG DG 8 8 8 N 8 -3.69 0.40 104.50 100.81 A A A O4' C4' C3' DT DT DT 9 9 9 N 8 2.88 0.30 108.30 111.18 A A A O4' C1' N1 DT DT DT 9 9 9 N 8 -4.10 0.60 122.90 118.80 A A A C6 C5 C7 DT DT DT 9 9 9 N 8 2.79 0.30 108.30 111.09 A A A O4' C1' N9 DG DG DG 10 10 10 N 8 3.27 0.50 113.10 116.37 A A A N7 C8 N9 DG DG DG 11 11 11 N 8 8.80 1.20 119.70 128.50 A A A C3' O3' P DG DG DT 11 11 12 Y 8 6.73 0.30 108.30 115.03 A A A O4' C1' N1 DT DT DT 12 12 12 N 8 5.63 0.30 108.30 113.93 A A A O4' C1' N1 DT DT DT 13 13 13 N 8 -4.11 0.60 122.90 118.79 A A A C6 C5 C7 DT DT DT 13 13 13 N 8 4.47 0.30 108.30 112.77 A A A O4' C1' N9 DG DG DG 14 14 14 N 8 3.22 0.50 113.10 116.32 A A A N7 C8 N9 DG DG DG 14 14 14 N 8 3.86 0.30 108.30 112.16 A A A O4' C1' N9 DG DG DG 15 15 15 N 8 3.00 0.50 113.10 116.10 A A A N7 C8 N9 DG DG DG 15 15 15 N 9 3.78 0.30 108.30 112.08 A A A O4' C1' N9 DG DG DG 1 1 1 N 9 3.76 0.50 113.10 116.86 A A A N7 C8 N9 DG DG DG 1 1 1 N 9 3.12 0.50 113.10 116.22 A A A N7 C8 N9 DG DG DG 2 2 2 N 9 5.42 0.30 108.30 113.72 A A A O4' C1' N1 DT DT DT 3 3 3 N 9 -4.08 0.60 122.90 118.82 A A A C6 C5 C7 DT DT DT 4 4 4 N 9 -4.32 0.70 108.00 103.68 A A A O4' C1' N9 DG DG DG 5 5 5 N 9 -3.44 0.50 104.30 100.86 A A A C5 N7 C8 DG DG DG 5 5 5 N 9 4.52 0.50 113.10 117.62 A A A N7 C8 N9 DG DG DG 5 5 5 N 9 -5.15 0.80 109.40 104.25 A A A O5' C5' C4' DG DG DG 6 6 6 N 9 8.03 1.10 109.80 117.83 A A A C5' C4' O4' DG DG DG 6 6 6 N 9 5.74 0.30 108.30 114.04 A A A O4' C1' N9 DG DG DG 6 6 6 N 9 5.16 0.50 113.10 118.26 A A A N7 C8 N9 DG DG DG 6 6 6 N 9 -3.14 0.40 106.40 103.26 A A A C8 N9 C4 DG DG DG 6 6 6 N 9 9.13 1.20 119.70 128.83 A A A C3' O3' P DG DG DT 6 6 7 Y 9 4.87 0.60 106.00 110.87 A A A O4' C4' C3' DT DT DT 7 7 7 N 9 -5.98 0.70 102.20 96.22 A A A C4' C3' C2' DT DT DT 7 7 7 N 9 -5.63 0.80 109.40 103.77 A A A O5' C5' C4' DG DG DG 8 8 8 N 9 17.43 1.10 109.80 127.23 A A A C5' C4' O4' DG DG DG 8 8 8 N 9 -5.13 0.70 102.20 97.07 A A A C4' C3' C2' DG DG DG 8 8 8 N 9 7.45 1.20 102.50 109.95 A A A C3' C2' C1' DG DG DG 8 8 8 N 9 -5.71 0.80 105.90 100.19 A A A O4' C1' C2' DG DG DG 8 8 8 N 9 4.26 0.50 113.10 117.36 A A A N7 C8 N9 DG DG DG 8 8 8 N 9 -5.31 0.40 104.50 99.19 A A A O4' C4' C3' DT DT DT 9 9 9 N 9 7.48 1.10 109.80 117.28 A A A C5' C4' O4' DT DT DT 9 9 9 N 9 1.98 0.30 108.30 110.28 A A A O4' C1' N9 DG DG DG 10 10 10 N 9 3.12 0.50 113.10 116.22 A A A N7 C8 N9 DG DG DG 10 10 10 N 9 3.88 0.60 106.00 109.88 A A A O4' C4' C3' DG DG DG 11 11 11 N 9 -4.23 0.70 102.20 97.97 A A A C4' C3' C2' DT DT DT 12 12 12 N 9 7.85 0.30 108.30 116.15 A A A O4' C1' N1 DT DT DT 12 12 12 N 9 2.50 0.30 108.30 110.80 A A A O4' C1' N1 DT DT DT 13 13 13 N 9 -4.31 0.60 122.90 118.59 A A A C6 C5 C7 DT DT DT 13 13 13 N 9 4.30 0.30 108.30 112.60 A A A O4' C1' N9 DG DG DG 14 14 14 N 9 3.08 0.50 113.10 116.18 A A A N7 C8 N9 DG DG DG 14 14 14 N 9 2.58 0.30 108.30 110.88 A A A O4' C1' N9 DG DG DG 15 15 15 N 10 6.34 0.30 108.30 114.64 A A A O4' C1' N9 DG DG DG 1 1 1 N 10 3.23 0.50 113.10 116.33 A A A N7 C8 N9 DG DG DG 1 1 1 N 10 3.64 0.60 106.00 109.64 A A A O4' C4' C3' DG DG DG 2 2 2 N 10 3.08 0.50 113.10 116.18 A A A N7 C8 N9 DG DG DG 2 2 2 N 10 8.69 1.20 119.70 128.39 A A A C3' O3' P DG DG DT 2 2 3 Y 10 2.46 0.30 108.30 110.76 A A A O4' C1' N1 DT DT DT 3 3 3 N 10 8.20 1.10 109.80 118.00 A A A C5' C4' O4' DT DT DT 4 4 4 N 10 -5.22 0.80 105.90 100.68 A A A O4' C1' C2' DT DT DT 4 4 4 N 10 -3.63 0.60 122.90 119.27 A A A C6 C5 C7 DT DT DT 4 4 4 N 10 8.16 1.20 115.70 123.86 A A A C5' C4' C3' DG DG DG 5 5 5 N 10 3.36 0.50 113.10 116.46 A A A N7 C8 N9 DG DG DG 5 5 5 N 10 3.71 0.60 106.00 109.71 A A A O4' C4' C3' DG DG DG 6 6 6 N 10 11.21 1.10 109.80 121.01 A A A C5' C4' O4' DG DG DG 6 6 6 N 10 -5.11 0.80 105.90 100.79 A A A O4' C1' C2' DG DG DG 6 6 6 N 10 4.82 0.30 108.30 113.12 A A A O4' C1' N9 DG DG DG 6 6 6 N 10 4.92 0.50 113.10 118.02 A A A N7 C8 N9 DG DG DG 6 6 6 N 10 -2.49 0.40 106.40 103.91 A A A C8 N9 C4 DG DG DG 6 6 6 N 10 -12.87 1.90 104.00 91.13 A A A O3' P O5' DG DT DT 6 7 7 Y 10 3.65 0.60 106.00 109.65 A A A O4' C4' C3' DT DT DT 7 7 7 N 10 -6.15 0.70 102.20 96.05 A A A C4' C3' C2' DT DT DT 7 7 7 N 10 4.20 0.60 106.00 110.20 A A A O4' C4' C3' DG DG DG 8 8 8 N 10 13.27 1.10 109.80 123.07 A A A C5' C4' O4' DG DG DG 8 8 8 N 10 -6.80 0.70 102.20 95.40 A A A C4' C3' C2' DG DG DG 8 8 8 N 10 9.42 1.20 102.50 111.92 A A A C3' C2' C1' DG DG DG 8 8 8 N 10 -7.91 0.80 105.90 97.99 A A A O4' C1' C2' DG DG DG 8 8 8 N 10 -12.20 1.90 112.60 100.40 A A A N9 C1' C2' DG DG DG 8 8 8 N 10 3.47 0.50 113.10 116.57 A A A N7 C8 N9 DG DG DG 8 8 8 N 10 -6.90 0.80 109.40 102.50 A A A O5' C5' C4' DT DT DT 9 9 9 N 10 10.51 1.60 120.90 131.41 A A A P O5' C5' DT DT DT 9 9 9 N 10 -2.75 0.40 104.50 101.75 A A A O4' C4' C3' DT DT DT 9 9 9 N 10 2.67 0.30 108.30 110.97 A A A O4' C1' N1 DT DT DT 9 9 9 N 10 -4.88 0.60 122.90 118.02 A A A C6 C5 C7 DT DT DT 9 9 9 N 10 3.09 0.50 113.10 116.19 A A A N7 C8 N9 DG DG DG 11 11 11 N 10 -4.47 0.70 102.20 97.73 A A A C4' C3' C2' DT DT DT 12 12 12 N 10 8.11 0.30 108.30 116.41 A A A O4' C1' N1 DT DT DT 12 12 12 N 10 5.51 0.30 108.30 113.81 A A A O4' C1' N1 DT DT DT 13 13 13 N 10 -3.82 0.60 122.90 119.08 A A A C6 C5 C7 DT DT DT 13 13 13 N 10 4.28 0.30 108.30 112.58 A A A O4' C1' N9 DG DG DG 14 14 14 N 10 3.01 0.50 113.10 116.11 A A A N7 C8 N9 DG DG DG 14 14 14 N 10 5.24 0.30 108.30 113.54 A A A O4' C1' N9 DG DG DG 15 15 15 N 11 3.53 0.30 108.30 111.83 A A A O4' C1' N9 DG DG DG 1 1 1 N 11 3.64 0.50 113.10 116.74 A A A N7 C8 N9 DG DG DG 1 1 1 N 11 3.06 0.50 113.10 116.16 A A A N7 C8 N9 DG DG DG 2 2 2 N 11 8.29 1.20 119.70 127.99 A A A C3' O3' P DG DG DT 2 2 3 Y 11 5.14 0.30 108.30 113.44 A A A O4' C1' N1 DT DT DT 3 3 3 N 11 6.74 1.10 109.80 116.54 A A A C5' C4' O4' DT DT DT 4 4 4 N 11 2.47 0.30 108.30 110.77 A A A O4' C1' N9 DG DG DG 5 5 5 N 11 3.66 0.50 113.10 116.76 A A A N7 C8 N9 DG DG DG 5 5 5 N 11 4.81 0.60 106.00 110.81 A A A O4' C4' C3' DG DG DG 6 6 6 N 11 -16.22 1.90 104.00 87.78 A A A O3' P O5' DG DT DT 6 7 7 Y 11 5.10 0.60 106.00 111.10 A A A O4' C4' C3' DT DT DT 7 7 7 N 11 -5.24 0.70 102.20 96.96 A A A C4' C3' C2' DT DT DT 7 7 7 N 11 13.19 1.10 109.80 122.99 A A A C5' C4' O4' DG DG DG 8 8 8 N 11 -6.59 0.70 102.20 95.61 A A A C4' C3' C2' DG DG DG 8 8 8 N 11 8.50 1.20 102.50 111.00 A A A C3' C2' C1' DG DG DG 8 8 8 N 11 -7.57 0.80 105.90 98.33 A A A O4' C1' C2' DG DG DG 8 8 8 N 11 -5.08 0.40 104.50 99.42 A A A O4' C4' C3' DT DT DT 9 9 9 N 11 6.66 1.10 109.80 116.46 A A A C5' C4' O4' DT DT DT 9 9 9 N 11 4.97 0.70 110.30 115.27 A A A C1' O4' C4' DT DT DT 9 9 9 N 11 -6.61 0.80 105.90 99.29 A A A O4' C1' C2' DT DT DT 9 9 9 N 11 3.43 0.50 113.10 116.53 A A A N7 C8 N9 DG DG DG 10 10 10 N 11 4.48 0.30 108.30 112.78 A A A O4' C1' N1 DT DT DT 12 12 12 N 11 6.30 0.30 108.30 114.60 A A A O4' C1' N1 DT DT DT 13 13 13 N 11 -3.80 0.60 122.90 119.10 A A A C6 C5 C7 DT DT DT 13 13 13 N 11 4.23 0.30 108.30 112.53 A A A O4' C1' N9 DG DG DG 14 14 14 N 11 3.17 0.50 113.10 116.27 A A A N7 C8 N9 DG DG DG 14 14 14 N 11 -2.44 0.40 106.40 103.96 A A A C8 N9 C4 DG DG DG 14 14 14 N 11 3.14 0.50 113.10 116.24 A A A N7 C8 N9 DG DG DG 15 15 15 N 12 4.98 0.30 108.30 113.28 A A A O4' C1' N9 DG DG DG 1 1 1 N 12 3.48 0.50 113.10 116.58 A A A N7 C8 N9 DG DG DG 1 1 1 N 12 8.41 1.20 119.70 128.11 A A A C3' O3' P DG DG DT 2 2 3 Y 12 2.65 0.30 108.30 110.95 A A A O4' C1' N1 DT DT DT 3 3 3 N 12 9.20 1.10 109.80 119.00 A A A C5' C4' O4' DT DT DT 4 4 4 N 12 -5.90 0.80 105.90 100.00 A A A O4' C1' C2' DT DT DT 4 4 4 N 12 -3.33 0.50 104.30 100.97 A A A C5 N7 C8 DG DG DG 5 5 5 N 12 3.89 0.50 113.10 116.99 A A A N7 C8 N9 DG DG DG 5 5 5 N 12 3.66 0.60 106.00 109.66 A A A O4' C4' C3' DG DG DG 6 6 6 N 12 7.80 1.10 109.80 117.60 A A A C5' C4' O4' DG DG DG 6 6 6 N 12 4.82 0.30 108.30 113.12 A A A O4' C1' N9 DG DG DG 6 6 6 N 12 -3.16 0.50 104.30 101.14 A A A C5 N7 C8 DG DG DG 6 6 6 N 12 4.12 0.50 113.10 117.22 A A A N7 C8 N9 DG DG DG 6 6 6 N 12 -18.09 1.90 104.00 85.91 A A A O3' P O5' DG DT DT 6 7 7 Y 12 5.13 0.60 106.00 111.13 A A A O4' C4' C3' DT DT DT 7 7 7 N 12 -5.30 0.70 102.20 96.90 A A A C4' C3' C2' DT DT DT 7 7 7 N 12 4.82 0.60 106.00 110.82 A A A O4' C4' C3' DG DG DG 8 8 8 N 12 13.45 1.10 109.80 123.25 A A A C5' C4' O4' DG DG DG 8 8 8 N 12 -7.15 0.70 102.20 95.05 A A A C4' C3' C2' DG DG DG 8 8 8 N 12 9.20 1.20 102.50 111.70 A A A C3' C2' C1' DG DG DG 8 8 8 N 12 -6.65 0.80 105.90 99.25 A A A O4' C1' C2' DG DG DG 8 8 8 N 12 -12.72 1.90 112.60 99.88 A A A N9 C1' C2' DG DG DG 8 8 8 N 12 -3.03 0.50 104.30 101.27 A A A C5 N7 C8 DG DG DG 8 8 8 N 12 4.01 0.50 113.10 117.11 A A A N7 C8 N9 DG DG DG 8 8 8 N 12 -5.79 0.80 109.40 103.61 A A A O5' C5' C4' DT DT DT 9 9 9 N 12 -3.42 0.40 104.50 101.08 A A A O4' C4' C3' DT DT DT 9 9 9 N 12 3.60 0.30 108.30 111.90 A A A O4' C1' N1 DT DT DT 9 9 9 N 12 -3.91 0.60 122.90 118.99 A A A C6 C5 C7 DT DT DT 9 9 9 N 12 2.50 0.30 108.30 110.80 A A A O4' C1' N9 DG DG DG 10 10 10 N 12 -3.15 0.50 104.30 101.15 A A A C5 N7 C8 DG DG DG 11 11 11 N 12 3.70 0.50 113.10 116.80 A A A N7 C8 N9 DG DG DG 11 11 11 N 12 2.13 0.30 108.30 110.43 A A A O4' C1' N1 DT DT DT 12 12 12 N 12 -3.61 0.60 122.90 119.29 A A A C6 C5 C7 DT DT DT 12 12 12 N 12 6.06 0.30 108.30 114.36 A A A O4' C1' N1 DT DT DT 13 13 13 N 12 5.13 0.30 108.30 113.43 A A A O4' C1' N9 DG DG DG 14 14 14 N 12 3.33 0.50 113.10 116.43 A A A N7 C8 N9 DG DG DG 14 14 14 N 12 2.76 0.30 108.30 111.06 A A A O4' C1' N9 DG DG DG 15 15 15 N 1 A A C5 C7 DT DT 4 4 0.041 0.006 1.496 1.537 N 1 A A C5 C7 DT DT 7 7 0.047 0.006 1.496 1.543 N 1 A A C5' C4' DG DG 8 8 0.050 0.007 1.512 1.562 N 1 A A C5' C4' DT DT 9 9 0.119 0.007 1.512 1.631 N 1 A A C5 C7 DT DT 9 9 0.048 0.006 1.496 1.544 N 1 A A C5' C4' DG DG 10 10 0.054 0.007 1.512 1.566 N 1 A A C5 C7 DT DT 12 12 0.038 0.006 1.496 1.534 N 2 A A C5 C7 DT DT 3 3 0.037 0.006 1.496 1.533 N 2 A A C5 C7 DT DT 4 4 0.042 0.006 1.496 1.538 N 2 A A C8 N9 DG DG 5 5 -0.043 0.007 1.374 1.331 N 2 A A C5 C7 DT DT 7 7 0.045 0.006 1.496 1.541 N 2 A A C5' C4' DG DG 8 8 0.061 0.007 1.512 1.573 N 2 A A C5' C4' DT DT 9 9 0.129 0.007 1.512 1.641 N 2 A A C5 C7 DT DT 12 12 0.038 0.006 1.496 1.534 N 3 A A C5 C7 DT DT 4 4 0.040 0.006 1.496 1.536 N 3 A A C5 C7 DT DT 7 7 0.043 0.006 1.496 1.539 N 3 A A C5' C4' DG DG 8 8 0.051 0.007 1.512 1.563 N 3 A A C5' C4' DT DT 9 9 0.121 0.007 1.512 1.633 N 3 A A C5 C7 DT DT 9 9 0.041 0.006 1.496 1.537 N 3 A A C5 C7 DT DT 12 12 0.039 0.006 1.496 1.535 N 4 A A C5 C7 DT DT 3 3 0.040 0.006 1.496 1.536 N 4 A A C5' C4' DT DT 4 4 0.043 0.007 1.512 1.555 N 4 A A C5' C4' DG DG 5 5 0.047 0.007 1.512 1.559 N 4 A A C5 C7 DT DT 7 7 0.041 0.006 1.496 1.537 N 4 A A C5' C4' DG DG 8 8 0.061 0.007 1.512 1.573 N 4 A A C5' C4' DT DT 9 9 0.134 0.007 1.512 1.646 N 4 A A C5 C7 DT DT 12 12 0.038 0.006 1.496 1.534 N 5 A A C5 C7 DT DT 3 3 0.036 0.006 1.496 1.532 N 5 A A C5 C7 DT DT 4 4 0.036 0.006 1.496 1.532 N 5 A A C2' C1' DG DG 6 6 -0.063 0.010 1.518 1.455 N 5 A A C8 N9 DG DG 6 6 -0.048 0.007 1.374 1.326 N 5 A A C5 C7 DT DT 7 7 0.039 0.006 1.496 1.535 N 5 A A C5' C4' DG DG 8 8 0.058 0.007 1.512 1.570 N 5 A A C5' C4' DT DT 9 9 0.085 0.007 1.512 1.597 N 5 A A C5 C7 DT DT 9 9 0.039 0.006 1.496 1.535 N 5 A A C5' C4' DG DG 10 10 0.057 0.007 1.512 1.569 N 5 A A C5 C7 DT DT 12 12 0.039 0.006 1.496 1.535 N 6 A A C5 C7 DT DT 3 3 0.038 0.006 1.496 1.534 N 6 A A C8 N9 DG DG 6 6 -0.046 0.007 1.374 1.328 N 6 A A C5 C7 DT DT 7 7 0.042 0.006 1.496 1.538 N 6 A A C5' C4' DG DG 8 8 0.042 0.007 1.512 1.554 N 6 A A C5' C4' DT DT 9 9 0.077 0.007 1.512 1.589 N 6 A A C5 C7 DT DT 9 9 0.039 0.006 1.496 1.535 N 6 A A C5' C4' DG DG 10 10 0.060 0.007 1.512 1.572 N 6 A A C5 C7 DT DT 12 12 0.039 0.006 1.496 1.535 N 7 A A C5 C7 DT DT 3 3 0.036 0.006 1.496 1.532 N 7 A A C5 C7 DT DT 4 4 0.042 0.006 1.496 1.538 N 7 A A C5 C7 DT DT 7 7 0.042 0.006 1.496 1.538 N 7 A A C5' C4' DG DG 8 8 0.058 0.007 1.512 1.570 N 7 A A C5' C4' DT DT 9 9 0.115 0.007 1.512 1.627 N 7 A A C5 C7 DT DT 9 9 0.045 0.006 1.496 1.541 N 7 A A C5' C4' DG DG 10 10 0.059 0.007 1.512 1.571 N 7 A A C5 C7 DT DT 12 12 0.037 0.006 1.496 1.533 N 7 A A C5 C7 DT DT 13 13 0.039 0.006 1.496 1.535 N 8 A A C2' C1' DG DG 6 6 -0.065 0.010 1.518 1.453 N 8 A A C8 N9 DG DG 6 6 -0.049 0.007 1.374 1.325 N 8 A A C5 C7 DT DT 7 7 0.038 0.006 1.496 1.534 N 8 A A C5' C4' DT DT 9 9 0.096 0.007 1.512 1.608 N 8 A A C5 C7 DT DT 9 9 0.047 0.006 1.496 1.543 N 8 A A C5' C4' DG DG 10 10 0.060 0.007 1.512 1.572 N 8 A A C5 C7 DT DT 13 13 0.037 0.006 1.496 1.533 N 9 A A C5 C7 DT DT 7 7 0.041 0.006 1.496 1.537 N 9 A A C5' C4' DG DG 8 8 0.083 0.007 1.512 1.595 N 9 A A C5' C4' DT DT 9 9 0.122 0.007 1.512 1.634 N 9 A A C5 C7 DT DT 12 12 0.039 0.006 1.496 1.535 N 10 A A C5 C7 DT DT 3 3 0.038 0.006 1.496 1.534 N 10 A A C5' C4' DG DG 8 8 0.049 0.007 1.512 1.561 N 10 A A C5' C4' DT DT 9 9 0.110 0.007 1.512 1.622 N 10 A A C5 C7 DT DT 9 9 0.038 0.006 1.496 1.534 N 10 A A C5' C4' DG DG 10 10 0.049 0.007 1.512 1.561 N 10 A A C5 C7 DT DT 12 12 0.037 0.006 1.496 1.533 N 11 A A C3' C2' DG DG 6 6 -0.049 0.008 1.516 1.467 N 11 A A C5 C7 DT DT 7 7 0.046 0.006 1.496 1.542 N 11 A A C5' C4' DG DG 8 8 0.067 0.007 1.512 1.579 N 11 A A C5' C4' DT DT 9 9 0.123 0.007 1.512 1.635 N 11 A A C5 C7 DT DT 12 12 0.036 0.006 1.496 1.532 N 11 A A C5 C7 DT DT 13 13 0.037 0.006 1.496 1.533 N 12 A A C5 C7 DT DT 3 3 0.039 0.006 1.496 1.535 N 12 A A C8 N9 DG DG 6 6 -0.059 0.007 1.374 1.315 N 12 A A C5 C7 DT DT 7 7 0.046 0.006 1.496 1.542 N 12 A A C5' C4' DT DT 9 9 0.107 0.007 1.512 1.619 N 12 A A C5 C7 DT DT 9 9 0.036 0.006 1.496 1.532 N 12 A A C5' C4' DG DG 10 10 0.053 0.007 1.512 1.565 N 12 A A C5 C7 DT DT 13 13 0.038 0.006 1.496 1.534 N model building X-PLOR refinement X-PLOR phasing X-PLOR THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE THROMBIN BINDING DNA APTAMER D(GGTTGGTGTGGTTGG) 1 N N hydrog TYPE_6_PAIR A DG 1 A N1 DG 1 1_555 A DG 6 A O6 DG 6 1_555 hydrog TYPE_6_PAIR A DG 1 A N2 DG 1 1_555 A DG 6 A N7 DG 6 1_555 hydrog TYPE_6_PAIR A DG 1 A N7 DG 1 1_555 A DG 15 A N2 DG 15 1_555 hydrog TYPE_6_PAIR A DG 1 A O6 DG 1 1_555 A DG 15 A N1 DG 15 1_555 hydrog TYPE_6_PAIR A DG 2 A N7 DG 2 1_555 A DG 5 A N2 DG 5 1_555 hydrog TYPE_6_PAIR A DG 2 A O6 DG 2 1_555 A DG 5 A N1 DG 5 1_555 hydrog TYPE_6_PAIR A DG 2 A N1 DG 2 1_555 A DG 14 A O6 DG 14 1_555 hydrog TYPE_6_PAIR A DG 2 A N2 DG 2 1_555 A DG 14 A N7 DG 14 1_555 hydrog TYPE_13_PAIR A DT 4 A N3 DT 4 1_555 A DT 13 A O2 DT 13 1_555 hydrog TYPE_13_PAIR A DT 4 A O2 DT 4 1_555 A DT 13 A N3 DT 13 1_555 hydrog TYPE_6_PAIR A DG 5 A N7 DG 5 1_555 A DG 11 A N2 DG 11 1_555 hydrog TYPE_6_PAIR A DG 5 A O6 DG 5 1_555 A DG 11 A N1 DG 11 1_555 hydrog TYPE_6_PAIR A DG 6 A N1 DG 6 1_555 A DG 10 A O6 DG 10 1_555 hydrog TYPE_6_PAIR A DG 6 A N2 DG 6 1_555 A DG 10 A N7 DG 10 1_555 hydrog DG-DG MISPAIR A DG 10 A N1 DG 10 1_555 A DG 14 A O6 DG 14 1_555 hydrog TYPE_6_PAIR A DG 10 A N1 DG 10 1_555 A DG 15 A O6 DG 15 1_555 hydrog TYPE_6_PAIR A DG 10 A N2 DG 10 1_555 A DG 15 A N7 DG 15 1_555 hydrog TYPE_6_PAIR A DG 11 A N7 DG 11 1_555 A DG 14 A N2 DG 14 1_555 hydrog TYPE_6_PAIR A DG 11 A O6 DG 11 1_555 A DG 14 A N1 DG 14 1_555 DNA DNA 148D PDB 1 148D 1 15 148D 1 15 148D A 1 1 15 1 P 1