0.041134 0.000000 0.000000 0.000000 0.025222 0.000000 0.000000 0.000000 0.015860 0.00000 0.00000 0.00000 Leonard, G.A. McAuley-Hecht, K.E. Gibson, N.J. Brown, T. Watson, W.P. Hunter, W.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 24.311 39.648 63.050 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C12 H14 N5 O6 P 355.243 n 3-[2-DEOXY-RIBOFURANOSYL]-3H-1,3,4,5A,8-PENTAAZA-AS-INDACENE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N P N 145 N O N 146 N O N 147 N O N 148 N O Y 149 N N Y 150 N C Y 151 N N Y 152 N C Y 153 N N Y 154 N C Y 155 N C Y 156 N C Y 157 N N Y 158 N C Y 159 N N Y 160 N C N 161 N C N 162 N C N 163 R C N 164 N O N 165 R C N 166 S C N 167 N O N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N H N 184 N H N 185 N MG N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing Y 157 N sing Y 158 N sing N 159 N sing Y 160 N sing Y 161 N doub Y 162 N doub Y 163 N sing N 164 N sing Y 165 N sing Y 166 N sing Y 167 N doub Y 168 N sing Y 169 N doub N 170 N sing Y 171 N sing N 172 N sing Y 173 N sing Y 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing US Biochemistry BICHAW 0033 0006-2960 33 4755 4761 10.1021/bi00182a002 8161534 Guanine-1,N6-ethenoadenine base pairs in the crystal structure of d(CGCGAATT(epsilon dA)GCG). 1994 10.2210/pdb150d/pdb pdb_0000150d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 297.00 1 IMAGE PLATE RIGAKU RAXIS IIC x-ray 1 1.0 ROTATING ANODE RIGAKU RU200 3711.438 DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDA)P*GP*CP*G)-3') 2 syn polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 128 nat water no yes (DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(EDA)(DG)(DC)(DG) CGCGAATTAGCG A,B polydeoxyribonucleotide n n n n n n n n n n n n 2.05 39.91 VAPOR DIFFUSION, SITTING DROP 6.50 pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K 277.00 WATER 1 MPD 1 NA CACODYLATE 1 MGCL2 1 SPERMINE_HCL 1 WATER 2 MPD 2 -6.630 1 19 A 1 B 24 2.663 A_DC1:DG24_B 1 -12.840 0.086 0.297 -0.177 -2.689 1 19 A 2 B 23 -2.632 A_DG2:DC23_B 2 -19.232 -0.171 -0.190 -0.375 -2.801 1 19 A 3 B 22 2.741 A_DC3:DG22_B 3 -10.907 0.017 0.186 -0.135 0.011 3 9 A 4 B 21 -85.218 A_DG4:EDA21_B 4 -17.154 1.384 -0.099 3.671 10.093 1 20 A 5 B 20 -5.986 A_DA5:DT20_B 5 -18.176 -0.070 -0.037 -0.232 3.793 1 20 A 6 B 19 -2.190 A_DA6:DT19_B 6 -19.863 0.272 0.239 -0.333 -1.312 1 20 A 7 B 18 1.308 A_DT7:DA18_B 7 -21.535 -0.237 0.012 -0.316 -6.564 1 20 A 8 B 17 -3.241 A_DT8:DA17_B 8 -17.348 -0.102 0.058 -0.242 -6.163 A 9 B 16 87.717 A_EDA9:DG16_B 9 15.988 -1.376 0.268 -3.488 4.695 1 19 A 10 B 15 0.691 A_DG10:DC15_B 10 -6.412 -0.250 0.309 -0.336 4.180 1 19 A 11 B 14 -9.558 A_DC11:DG14_B 11 -15.688 -0.131 0.381 -0.467 4.765 1 19 A 12 B 13 -0.774 A_DG12:DC13_B 12 10.171 0.096 -0.417 -0.354 3.286 32.941 A A 1 2 12.985 B B 24 23 3.340 7.289 -0.722 0.607 AA_DC1DG2:DC23DG24_BB 1 3.908 -6.963 31.914 -0.207 1.960 3.189 41.401 A A 2 3 -7.264 B B 23 22 3.275 -5.123 1.166 0.766 AA_DG2DC3:DG22DC23_BB 2 1.076 -1.526 41.083 1.627 -1.534 3.188 78.361 A A 3 4 1.016 B B 22 21 3.142 1.283 1.397 -0.413 AA_DC3DG4:EDA21DG22_BB 3 3.633 -2.876 78.281 -0.361 -1.008 2.853 -10.134 A A 4 5 -4.788 B B 21 20 3.236 0.838 -0.626 1.998 AA_DG4DA5:DT20EDA21_BB 4 -2.161 -12.344 -9.866 -12.750 -7.261 3.275 41.592 A A 5 6 2.754 B B 20 19 3.310 1.955 0.141 -0.531 AA_DA5DA6:DT19DT20_BB 5 -1.712 2.413 41.514 -0.956 -0.381 3.361 28.463 A A 6 7 1.507 B B 19 18 3.374 0.740 0.216 -0.726 AA_DA6DT7:DA18DT19_BB 6 2.014 -4.100 28.383 -1.652 0.036 3.339 38.928 A A 7 8 2.002 B B 18 17 3.342 1.334 -0.181 -0.072 AA_DT7DT8:DA17DA18_BB 7 -0.270 0.405 38.905 -0.273 0.238 -0.617 176.214 A A 8 9 6.227 B B 17 16 1.560 12.271 1.008 -3.374 AA_DT8EDA9:DG16DA17_BB 8 -175.530 89.076 40.904 -1.711 -0.831 1.401 -174.734 A A 9 10 54.317 B B 16 15 0.247 -106.498 -3.077 -1.667 AA_EDA9DG10:DC15DG16_BB 9 137.963 70.365 -45.656 1.169 -1.106 3.379 39.434 A A 10 11 -13.000 B B 15 14 3.508 -8.697 -1.072 0.553 AA_DG10DC11:DG14DC15_BB 10 -2.965 4.432 38.390 1.917 1.215 3.604 39.901 A A 11 12 -9.815 B B 14 13 3.657 -6.652 0.968 0.596 AA_DC11DG12:DC13DG14_BB 11 5.028 -7.418 39.055 1.735 -0.768 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_conn_type struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1994-05-31 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1993-12-02 REL REL MG MAGNESIUM ION HOH water MO6 25 2 MG MG 25 A HOH 26 3 HOH HOH 26 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 30 3 HOH HOH 30 A HOH 31 3 HOH HOH 31 A HOH 34 3 HOH HOH 34 A HOH 35 3 HOH HOH 35 A HOH 38 3 HOH HOH 38 A HOH 43 3 HOH HOH 43 A HOH 55 3 HOH HOH 55 A HOH 56 3 HOH HOH 56 A HOH 57 3 HOH HOH 57 A HOH 59 3 HOH HOH 59 A HOH 68 3 HOH HOH 68 A HOH 69 3 HOH HOH 69 A HOH 70 3 HOH HOH 70 A HOH 71 3 HOH HOH 71 A HOH 72 3 HOH HOH 72 A HOH 83 3 HOH HOH 83 A HOH 86 3 HOH HOH 86 A HOH 87 3 HOH HOH 87 A HOH 90 3 HOH HOH 90 A HOH 91 3 HOH HOH 91 A HOH 92 3 HOH HOH 92 A HOH 94 3 HOH HOH 94 A HOH 95 3 HOH HOH 95 A HOH 96 3 HOH HOH 96 A HOH 97 3 HOH HOH 97 A HOH 104 3 HOH HOH 104 A HOH 105 3 HOH HOH 105 A HOH 106 3 HOH HOH 106 A HOH 107 3 HOH HOH 107 A HOH 108 3 HOH HOH 108 A HOH 109 3 HOH HOH 109 A HOH 110 3 HOH HOH 110 A HOH 111 3 HOH HOH 111 A HOH 113 3 HOH HOH 113 A HOH 114 3 HOH HOH 114 A HOH 115 3 HOH HOH 115 A HOH 116 3 HOH HOH 116 A HOH 117 3 HOH HOH 117 A HOH 118 3 HOH HOH 118 A HOH 119 3 HOH HOH 119 A HOH 120 3 HOH HOH 120 A HOH 123 3 HOH HOH 123 A HOH 124 3 HOH HOH 124 A HOH 126 3 HOH HOH 126 A HOH 128 3 HOH HOH 128 A HOH 129 3 HOH HOH 129 A HOH 130 3 HOH HOH 130 A HOH 132 3 HOH HOH 132 A HOH 134 3 HOH HOH 134 A HOH 135 3 HOH HOH 135 A HOH 136 3 HOH HOH 136 A HOH 138 3 HOH HOH 138 A HOH 139 3 HOH HOH 139 A HOH 141 3 HOH HOH 141 A HOH 146 3 HOH HOH 146 A HOH 147 3 HOH HOH 147 A MO6 25 3 HOH HOH 148 A MO6 25 3 HOH HOH 150 A MO6 25 3 HOH HOH 153 A HOH 27 3 HOH HOH 27 B HOH 32 3 HOH HOH 32 B HOH 33 3 HOH HOH 33 B HOH 36 3 HOH HOH 36 B HOH 37 3 HOH HOH 37 B HOH 39 3 HOH HOH 39 B HOH 40 3 HOH HOH 40 B HOH 41 3 HOH HOH 41 B HOH 42 3 HOH HOH 42 B HOH 44 3 HOH HOH 44 B HOH 45 3 HOH HOH 45 B HOH 46 3 HOH HOH 46 B HOH 47 3 HOH HOH 47 B HOH 48 3 HOH HOH 48 B HOH 49 3 HOH HOH 49 B HOH 50 3 HOH HOH 50 B HOH 51 3 HOH HOH 51 B HOH 52 3 HOH HOH 52 B HOH 53 3 HOH HOH 53 B HOH 54 3 HOH HOH 54 B HOH 58 3 HOH HOH 58 B HOH 60 3 HOH HOH 60 B HOH 61 3 HOH HOH 61 B HOH 62 3 HOH HOH 62 B HOH 63 3 HOH HOH 63 B HOH 64 3 HOH HOH 64 B HOH 65 3 HOH HOH 65 B HOH 66 3 HOH HOH 66 B HOH 67 3 HOH HOH 67 B HOH 73 3 HOH HOH 73 B HOH 74 3 HOH HOH 74 B HOH 75 3 HOH HOH 75 B HOH 76 3 HOH HOH 76 B HOH 77 3 HOH HOH 77 B HOH 78 3 HOH HOH 78 B HOH 79 3 HOH HOH 79 B HOH 80 3 HOH HOH 80 B HOH 81 3 HOH HOH 81 B HOH 82 3 HOH HOH 82 B HOH 84 3 HOH HOH 84 B HOH 85 3 HOH HOH 85 B HOH 88 3 HOH HOH 88 B HOH 89 3 HOH HOH 89 B HOH 93 3 HOH HOH 93 B HOH 98 3 HOH HOH 98 B HOH 99 3 HOH HOH 99 B HOH 100 3 HOH HOH 100 B HOH 101 3 HOH HOH 101 B HOH 102 3 HOH HOH 102 B HOH 103 3 HOH HOH 103 B HOH 112 3 HOH HOH 112 B HOH 121 3 HOH HOH 121 B HOH 122 3 HOH HOH 122 B HOH 125 3 HOH HOH 125 B HOH 127 3 HOH HOH 127 B HOH 131 3 HOH HOH 131 B HOH 133 3 HOH HOH 133 B HOH 137 3 HOH HOH 137 B HOH 140 3 HOH HOH 140 B HOH 142 3 HOH HOH 142 B HOH 143 3 HOH HOH 143 B HOH 144 3 HOH HOH 144 B HOH 145 3 HOH HOH 145 B MO6 25 3 HOH HOH 149 B MO6 25 3 HOH HOH 151 B MO6 25 3 HOH HOH 152 B C 1 n 1 DC 1 A G 2 n 2 DG 2 A C 3 n 3 DC 3 A G 4 n 4 DG 4 A A 5 n 5 DA 5 A A 6 n 6 DA 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A +A 9 n 9 EDA 9 A G 10 n 10 DG 10 A C 11 n 11 DC 11 A G 12 n 12 DG 12 A C 13 n 1 DC 13 B G 14 n 2 DG 14 B C 15 n 3 DC 15 B G 16 n 4 DG 16 B A 17 n 5 DA 17 B A 18 n 6 DA 18 B T 19 n 7 DT 19 B T 20 n 8 DT 20 B +A 21 n 9 EDA 21 B G 22 n 10 DG 22 B C 23 n 11 DC 23 B G 24 n 12 DG 24 B author_defined_assembly 2 dimeric A HOH 148 D O HOH 1_555 A MG 25 C MG MG 1_555 A HOH 150 D O HOH 1_555 90.4 A HOH 148 D O HOH 1_555 A MG 25 C MG MG 1_555 A HOH 153 D O HOH 1_555 90.3 A HOH 150 D O HOH 1_555 A MG 25 C MG MG 1_555 A HOH 153 D O HOH 1_555 90.1 A HOH 148 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 149 E O HOH 1_555 178.6 A HOH 150 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 149 E O HOH 1_555 90.9 A HOH 153 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 149 E O HOH 1_555 89.2 A HOH 148 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 151 E O HOH 1_555 90.3 A HOH 150 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 151 E O HOH 1_555 179.1 A HOH 153 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 151 E O HOH 1_555 89.3 B HOH 149 E O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 151 E O HOH 1_555 88.3 A HOH 148 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 152 E O HOH 1_555 91.0 A HOH 150 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 152 E O HOH 1_555 90.1 A HOH 153 D O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 152 E O HOH 1_555 178.7 B HOH 149 E O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 152 E O HOH 1_555 89.5 B HOH 151 E O HOH 1_555 A MG 25 C MG MG 1_555 B HOH 152 E O HOH 1_555 90.5 A EDA 9 A EDA 9 DA B EDA 21 B EDA 9 DA 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A B O O HOH HOH 90 89 2.04 1 B B N7 O DA HOH 17 39 2.13 1 B B O O HOH HOH 42 143 2.17 1 -2.56 0.40 121.90 119.34 A A A N3 C4 C5 DC DC DC 1 1 1 N 1 -5.34 0.80 109.40 104.06 A A A O5' C5' C4' DG DG DG 2 2 2 N 1 3.19 0.50 111.50 114.69 A A A C5 C6 N1 DG DG DG 2 2 2 N 1 10.04 1.20 119.70 129.74 A A A C3' O3' P DG DG DC 2 2 3 Y 1 -5.17 0.80 109.40 104.23 A A A O5' C5' C4' DC DC DC 3 3 3 N 1 8.61 1.20 119.70 128.31 A A A C3' O3' P DC DC DG 3 3 4 Y 1 4.63 0.30 108.30 112.93 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 11.35 1.20 119.70 131.05 A A A C3' O3' P DG DG DA 4 4 5 Y 1 3.75 0.30 108.30 112.05 A A A O4' C1' N9 DA DA DA 5 5 5 N 1 -3.09 0.50 117.70 114.61 A A A C5 C6 N1 DA DA DA 6 6 6 N 1 7.89 1.20 119.70 127.59 A A A C3' O3' P DA DA DT 6 6 7 Y 1 -5.07 0.80 109.40 104.33 A A A O5' C5' C4' DT DT DT 7 7 7 N 1 -4.30 0.60 127.20 122.90 A A A C2 N3 C4 DT DT DT 7 7 7 N 1 10.71 1.20 119.70 130.41 A A A C3' O3' P DT DT DT 7 7 8 Y 1 -5.01 0.80 109.40 104.39 A A A O5' C5' C4' DT DT DT 8 8 8 N 1 -6.86 0.80 105.90 99.04 A A A O4' C1' C2' DT DT DT 8 8 8 N 1 -4.53 0.60 127.20 122.67 A A A C2 N3 C4 DT DT DT 8 8 8 N 1 3.61 0.60 115.20 118.81 A A A N3 C4 C5 DT DT DT 8 8 8 N 1 9.23 1.20 119.70 128.93 A A A C3' O3' P DT DT EDA 8 8 9 Y 1 11.73 1.20 119.70 131.43 A A A C3' O3' P EDA EDA DG 9 9 10 Y 1 -5.17 0.80 105.90 100.73 A A A O4' C1' C2' DG DG DG 10 10 10 N 1 6.37 0.30 108.30 114.67 A A A O4' C1' N9 DG DG DG 10 10 10 N 1 -2.57 0.40 121.90 119.33 A A A N3 C4 C5 DC DC DC 11 11 11 N 1 -5.07 0.80 109.40 104.33 A A A O5' C5' C4' DG DG DG 12 12 12 N 1 3.19 0.30 108.30 111.49 B B B O4' C1' N1 DC DC DC 13 13 13 N 1 -2.50 0.40 121.90 119.40 B B B N3 C4 C5 DC DC DC 15 15 15 N 1 -5.00 0.70 102.20 97.20 B B B C4' C3' C2' DG DG DG 16 16 16 N 1 -5.46 0.80 102.40 96.94 B B B C3' C2' C1' DG DG DG 16 16 16 N 1 4.97 0.30 108.30 113.27 B B B O4' C1' N9 DG DG DG 16 16 16 N 1 1.92 0.30 108.30 110.22 B B B O4' C1' N9 DA DA DA 17 17 17 N 1 3.84 0.60 118.60 122.44 B B B C6 N1 C2 DA DA DA 17 17 17 N 1 -3.43 0.50 117.70 114.27 B B B C5 C6 N1 DA DA DA 17 17 17 N 1 3.65 0.30 108.30 111.95 B B B O4' C1' N9 DA DA DA 18 18 18 N 1 -3.30 0.50 129.30 126.00 B B B N1 C2 N3 DA DA DA 18 18 18 N 1 2.53 0.30 108.30 110.83 B B B O4' C1' N1 DT DT DT 19 19 19 N 1 3.77 0.60 114.60 118.37 B B B N1 C2 N3 DT DT DT 19 19 19 N 1 -5.00 0.60 127.20 122.20 B B B C2 N3 C4 DT DT DT 19 19 19 N 1 3.70 0.60 115.20 118.90 B B B N3 C4 C5 DT DT DT 19 19 19 N 1 7.11 1.10 109.80 116.91 B B B C5' C4' O4' DT DT DT 20 20 20 N 1 -4.99 0.60 127.20 122.21 B B B C2 N3 C4 DT DT DT 20 20 20 N 1 8.59 1.20 119.70 128.29 B B B C3' O3' P DT DT EDA 20 20 21 Y 1 -4.88 0.80 105.90 101.02 B B B O4' C1' C2' DG DG DG 22 22 22 N 1 5.69 0.30 108.30 113.99 B B B O4' C1' N9 DG DG DG 22 22 22 N 1 3.20 0.50 111.50 114.70 B B B C5 C6 N1 DG DG DG 22 22 22 N 1 -2.58 0.40 121.90 119.32 B B B N3 C4 C5 DC DC DC 23 23 23 N 1 2.38 0.30 108.30 110.68 B B B O4' C1' N9 DG DG DG 24 24 24 N 1 -3.90 0.60 125.10 121.20 B B B C6 N1 C2 DG DG DG 24 24 24 N 1 3.60 0.50 111.50 115.10 B B B C5 C6 N1 DG DG DG 24 24 24 N 1 B B O4' C4' DT DT 20 20 -0.065 0.010 1.446 1.381 N 0.182 0.182 2.250 7.000 2837 1 2.000 TR isotropic TR isotropic 2.250 7.000 122 623 11 490 0 fix fix 2.250 150D 12357 9932 0.500 1 refinement X-PLOR refinement NUCLSQ GUANINE.1,N6-ETHENOADENINE BASE-PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(EDA)GCG) 1 N N 1 N N 2 N N 3 N N 3 N N covale 1.594 both A DT 8 A O3' DT 8 1_555 A EDA 9 A P EDA 9 1_555 covale 1.591 both A EDA 9 A O3' EDA 9 1_555 A DG 10 A P DG 10 1_555 covale 1.587 both B DT 20 B O3' DT 8 1_555 B EDA 21 B P EDA 9 1_555 covale 1.591 both B EDA 21 B O3' EDA 9 1_555 B DG 22 B P DG 10 1_555 metalc 1.969 A MG 25 C MG MG 1_555 A HOH 148 D O HOH 1_555 metalc 1.978 A MG 25 C MG MG 1_555 A HOH 150 D O HOH 1_555 metalc 1.994 A MG 25 C MG MG 1_555 A HOH 153 D O HOH 1_555 metalc 2.005 A MG 25 C MG MG 1_555 B HOH 149 E O HOH 1_555 metalc 1.995 A MG 25 C MG MG 1_555 B HOH 151 E O HOH 1_555 metalc 1.977 A MG 25 C MG MG 1_555 B HOH 152 E O HOH 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 24 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 24 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 24 B N2 DG 12 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 23 B N3 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 23 B O2 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 23 B N4 DC 11 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 22 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 22 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 22 B N2 DG 10 1_555 hydrog TYPE_9_PAIR A DG 4 A N1 DG 4 1_555 B EDA 21 B N7 EDA 9 1_555 hydrog TYPE_9_PAIR A DG 4 A O6 DG 4 1_555 B EDA 21 B N6 EDA 9 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B DT 20 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B DT 20 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 19 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 19 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 18 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 18 B N6 DA 6 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 17 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 17 B N6 DA 5 1_555 hydrog EDA-DG MISPAIR A EDA 9 A N6 EDA 9 1_555 B DG 16 B O6 DG 4 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 15 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 15 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 15 B N4 DC 3 1_555 hydrog WATSON-CRICK A DC 11 A N3 DC 11 1_555 B DG 14 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A N4 DC 11 1_555 B DG 14 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A O2 DC 11 1_555 B DG 14 B N2 DG 2 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 13 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 13 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 13 B N4 DC 1 1_555 DNA B-DNA, DOUBLE HELIX, MODIFIED, MISMATCHED, DNA 150D PDB 1 150D 1 12 150D 1 12 150D A 1 1 12 13 24 150D 13 24 150D B 1 1 12 BINDING SITE FOR RESIDUE MG A 25 A MG 25 Software 6 A HOH 148 D HOH 6 1_555 A HOH 150 D HOH 6 1_555 A HOH 153 D HOH 6 1_555 B HOH 149 E HOH 6 1_555 B HOH 151 E HOH 6 1_555 B HOH 152 E HOH 6 1_555 19 P 21 21 21