0.039793
0.000000
0.000000
0.000000
0.024722
0.000000
0.000000
0.000000
0.015501
0.00000
0.00000
0.00000
Ginell, S.L.
Vojtechovsky, J.
Gaffney, B.
Jones, R.
Berman, H.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
25.130
40.450
64.510
C11 H16 N5 O7 P
361.248
n
6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
Y
5
N
N
Y
6
N
C
Y
7
N
N
Y
8
N
C
N
9
N
N
Y
10
N
N
Y
11
N
C
N
12
N
O
Y
13
N
C
Y
14
N
N
Y
15
N
C
N
16
N
C
N
17
N
C
N
18
R
C
N
19
N
O
N
20
R
C
N
21
S
C
N
22
N
O
N
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
O
N
40
N
H
N
41
N
O
N
42
N
P
N
43
N
O
N
44
N
O
N
45
N
O
N
46
N
C
N
47
R
C
N
48
N
O
N
49
S
C
N
50
N
O
N
51
N
C
N
52
R
C
Y
53
N
N
Y
54
N
C
Y
55
N
N
Y
56
N
C
Y
57
N
C
N
58
N
N
Y
59
N
N
Y
60
N
C
Y
61
N
N
Y
62
N
C
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
O
N
78
N
P
N
79
N
O
N
80
N
O
N
81
N
O
N
82
N
C
N
83
R
C
N
84
N
O
N
85
S
C
N
86
N
O
N
87
N
C
N
88
R
C
N
89
N
N
N
90
N
C
N
91
N
O
N
92
N
N
N
93
N
C
N
94
N
N
N
95
N
C
N
96
N
C
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
C
N
117
R
C
N
118
N
O
N
119
S
C
N
120
N
O
N
121
N
C
N
122
R
C
Y
123
N
N
Y
124
N
C
Y
125
N
N
Y
126
N
C
N
127
N
C
N
128
N
O
N
129
N
N
N
130
N
C
N
131
N
N
N
132
N
N
Y
133
N
C
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
O
N
149
N
P
N
150
N
O
N
151
N
O
N
152
N
O
N
153
N
C
N
154
R
C
N
155
N
O
N
156
S
C
N
157
N
O
N
158
N
C
N
159
R
C
N
160
N
N
N
161
N
C
N
162
N
O
N
163
N
N
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
O
N
185
N
H
N
186
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
Y
6
N
sing
Y
7
N
sing
N
8
N
sing
Y
9
N
sing
Y
10
N
doub
Y
11
N
doub
N
12
N
sing
Y
13
N
sing
N
14
N
sing
N
15
N
sing
Y
16
N
doub
N
17
N
sing
Y
18
N
sing
N
19
N
sing
Y
20
N
sing
Y
21
N
doub
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
Y
66
N
sing
Y
67
N
sing
Y
68
N
doub
N
69
N
sing
Y
70
N
sing
Y
71
N
sing
Y
72
N
doub
N
73
N
sing
Y
74
N
doub
N
75
N
sing
N
76
N
sing
Y
77
N
sing
Y
78
N
doub
N
79
N
sing
Y
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
Y
139
N
sing
Y
140
N
sing
Y
141
N
doub
N
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
33
3487
3493
10.1021/bi00178a004
8142345
Crystal structure of a mispaired dodecamer, d(CGAGAATTC(O6Me)GCG)2, containing a carcinogenic O6-methylguanine
1994
10.2210/pdb153d/pdb
pdb_0000153d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
133.00
1
DIFFRACTOMETER
ENRAF-NONIUS CAD4
x-ray
1
1.0
ROTATING ANODE
ENRAF-NONIUS FR571
3701.444
DNA (5'-D(*CP*GP*AP*GP*AP*AP*TP*TP*CP*(6OG)P*CP*G)-3')
2
syn
polymer
18.015
water
49
nat
water
no
yes
(DC)(DG)(DA)(DG)(DA)(DA)(DT)(DT)(DC)(6OG)(DC)(DG)
CGAGAATTCGCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
2.21
44.46
VAPOR DIFFUSION
7.00
pH 7.00, VAPOR DIFFUSION, temperature 277.00K
277.00
WATER
1
MPD
1
MGCL2
1
SPERMINE_HCL
1
NA CACODYLATE
1
WATER
2
MPD
2
10.044
1
19
A
1
B
24
-0.435
A_DC1:DG24_B
1
-3.031
-0.436
-0.041
-0.121
-0.233
1
19
A
2
B
23
-2.324
A_DG2:DC23_B
2
-8.791
-0.601
0.211
-0.542
8.504
A
3
B
22
78.360
A_DA3:6OG22_B
3
0.936
-2.639
-0.523
-2.973
12.398
1
19
A
4
B
21
1.342
A_DG4:DC21_B
4
-12.455
-0.058
0.372
-0.295
4.498
1
20
A
5
B
20
1.100
A_DA5:DT20_B
5
-11.522
0.365
0.313
-0.135
4.844
1
20
A
6
B
19
-4.365
A_DA6:DT19_B
6
-17.320
0.114
0.422
-0.239
-2.121
1
20
A
7
B
18
5.933
A_DT7:DA18_B
7
-14.344
-0.005
0.640
-0.147
-1.167
1
20
A
8
B
17
-4.548
A_DT8:DA17_B
8
-17.321
0.167
-0.062
-0.495
-11.785
1
19
A
9
B
16
1.670
A_DC9:DG16_B
9
-15.596
0.435
0.039
-0.123
-11.221
A
10
B
15
-74.116
A_6OG10:DA15_B
10
-3.410
2.635
0.357
3.475
-3.766
1
19
A
11
B
14
1.839
A_DC11:DG14_B
11
-10.087
0.171
0.404
0.022
-9.137
1
19
A
12
B
13
-0.924
A_DG12:DC13_B
12
-1.825
-0.391
-0.075
-0.333
3.424
32.786
A
A
1
2
5.463
B
B
24
23
3.323
3.064
1.062
-0.182
AA_DC1DG2:DC23DG24_BB
1
5.699
-10.159
32.158
-0.871
-0.861
0.186
-179.404
A
A
2
3
9.261
B
B
23
22
-0.463
-18.515
-2.313
3.678
AA_DG2DA3:6OG22DC23_BB
2
176.513
88.292
-152.597
-1.841
-1.173
-1.816
175.977
A
A
3
4
-59.754
B
B
22
21
-2.108
-118.230
-2.395
-1.703
AA_DA3DG4:DC216OG22_BB
3
128.718
-65.056
79.244
-1.476
0.519
3.455
40.007
A
A
4
5
2.134
B
B
21
20
3.444
1.457
-0.319
-0.025
AA_DG4DA5:DT20DC21_BB
4
-4.458
6.530
39.742
-0.213
-0.074
3.199
35.016
A
A
5
6
-10.372
B
B
20
19
3.126
-6.205
-0.465
-0.561
AA_DA5DA6:DT19DT20_BB
5
-2.300
3.845
34.404
-0.021
0.435
3.576
31.072
A
A
6
7
-9.317
B
B
19
18
3.469
-4.970
0.767
-0.865
AA_DA6DT7:DA18DT19_BB
6
0.614
-1.152
30.676
-0.582
-1.304
2.854
38.861
A
A
7
8
-1.305
B
B
18
17
2.965
-0.864
-0.512
-0.280
AA_DT7DT8:DA17DA18_BB
7
6.302
-9.511
38.357
-0.326
1.456
3.554
45.456
A
A
8
9
-5.350
B
B
17
16
3.571
-4.129
0.099
0.019
AA_DT8DC9:DG16DA17_BB
8
-0.661
0.857
45.273
0.422
-0.192
3.038
76.995
A
A
9
10
0.036
B
B
16
15
2.940
0.044
1.924
-1.707
AA_DC96OG10:DA15DG16_BB
9
4.917
-3.951
76.863
-1.372
-1.415
2.700
-12.265
A
A
10
11
16.126
B
B
15
14
3.626
-2.938
-0.255
3.458
AA_6OG10DC11:DG14DA15_BB
10
-9.639
-52.897
-7.000
-11.676
-15.984
3.267
29.312
A
A
11
12
12.053
B
B
14
13
3.509
6.021
-0.396
-0.163
AA_DC11DG12:DC13DG14_BB
11
5.585
-11.181
28.162
-1.696
2.057
diffrn_detector
chem_comp_atom
chem_comp_bond
database_2
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Data collection
Data collection
Database references
Derived calculations
1
0
1994-01-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2018-04-18
1
4
2024-02-07
_diffrn_detector.detector
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
BNL
Y
NDB
1993-12-16
REL
HOH
water
HOH
25
2
HOH
HOH
25
A
HOH
26
2
HOH
HOH
26
A
HOH
27
2
HOH
HOH
27
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
32
2
HOH
HOH
32
A
HOH
33
2
HOH
HOH
33
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
HOH
36
2
HOH
HOH
36
A
HOH
37
2
HOH
HOH
37
A
HOH
38
2
HOH
HOH
38
A
HOH
39
2
HOH
HOH
39
A
HOH
40
2
HOH
HOH
40
A
HOH
41
2
HOH
HOH
41
A
HOH
42
2
HOH
HOH
42
A
HOH
43
2
HOH
HOH
43
A
HOH
44
2
HOH
HOH
44
A
HOH
45
2
HOH
HOH
45
A
HOH
46
2
HOH
HOH
46
A
HOH
47
2
HOH
HOH
47
A
HOH
48
2
HOH
HOH
48
A
HOH
49
2
HOH
HOH
49
A
HOH
50
2
HOH
HOH
50
A
HOH
68
2
HOH
HOH
68
A
HOH
51
2
HOH
HOH
51
B
HOH
52
2
HOH
HOH
52
B
HOH
53
2
HOH
HOH
53
B
HOH
54
2
HOH
HOH
54
B
HOH
55
2
HOH
HOH
55
B
HOH
56
2
HOH
HOH
56
B
HOH
57
2
HOH
HOH
57
B
HOH
58
2
HOH
HOH
58
B
HOH
59
2
HOH
HOH
59
B
HOH
60
2
HOH
HOH
60
B
HOH
61
2
HOH
HOH
61
B
HOH
62
2
HOH
HOH
62
B
HOH
63
2
HOH
HOH
63
B
HOH
64
2
HOH
HOH
64
B
HOH
65
2
HOH
HOH
65
B
HOH
66
2
HOH
HOH
66
B
HOH
67
2
HOH
HOH
67
B
HOH
69
2
HOH
HOH
69
B
HOH
70
2
HOH
HOH
70
B
HOH
71
2
HOH
HOH
71
B
HOH
72
2
HOH
HOH
72
B
HOH
73
2
HOH
HOH
73
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
A
3
n
3
DA
3
A
G
4
n
4
DG
4
A
A
5
n
5
DA
5
A
A
6
n
6
DA
6
A
T
7
n
7
DT
7
A
T
8
n
8
DT
8
A
C
9
n
9
DC
9
A
+G
10
n
10
6OG
10
A
C
11
n
11
DC
11
A
G
12
n
12
DG
12
A
C
13
n
1
DC
13
B
G
14
n
2
DG
14
B
A
15
n
3
DA
15
B
G
16
n
4
DG
16
B
A
17
n
5
DA
17
B
A
18
n
6
DA
18
B
T
19
n
7
DT
19
B
T
20
n
8
DT
20
B
C
21
n
9
DC
21
B
+G
22
n
10
6OG
22
B
C
23
n
11
DC
23
B
G
24
n
12
DG
24
B
author_defined_assembly
2
dimeric
A
6OG
10
6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE
A
6OG
10
DG
B
6OG
22
6-O-METHYL GUANOSINE-5'-MONOPHOSPHATE
B
6OG
10
DG
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-7.91
0.80
109.40
101.49
A
A
A
O5'
C5'
C4'
DC
DC
DC
1
1
1
N
1
-4.55
0.70
102.20
97.65
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
1
-6.85
0.80
102.40
95.55
A
A
A
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
1
5.19
0.30
108.30
113.49
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
-9.13
1.00
110.10
100.97
A
A
A
C1'
O4'
C4'
DG
DG
DG
2
2
2
N
1
3.02
0.30
108.30
111.32
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
3.25
0.50
111.50
114.75
A
A
A
C5
C6
N1
DG
DG
DG
2
2
2
N
1
-5.42
0.80
105.90
100.48
A
A
A
O4'
C1'
C2'
DA
DA
DA
3
3
3
N
1
3.64
0.60
118.60
122.24
A
A
A
C6
N1
C2
DA
DA
DA
3
3
3
N
1
-3.16
0.50
129.30
126.14
A
A
A
N1
C2
N3
DA
DA
DA
3
3
3
N
1
7.24
1.20
110.70
117.94
A
A
A
O5'
P
OP1
DG
DG
DG
4
4
4
N
1
2.18
0.30
108.30
110.48
A
A
A
O4'
C1'
N9
DG
DG
DG
4
4
4
N
1
3.05
0.50
111.50
114.55
A
A
A
C5
C6
N1
DG
DG
DG
4
4
4
N
1
-3.10
0.50
129.30
126.20
A
A
A
N1
C2
N3
DA
DA
DA
5
5
5
N
1
-5.01
0.80
109.40
104.39
A
A
A
O5'
C5'
C4'
DA
DA
DA
6
6
6
N
1
10.48
1.20
119.70
130.18
A
A
A
C3'
O3'
P
DA
DA
DT
6
6
7
Y
1
-5.03
0.80
109.40
104.37
A
A
A
O5'
C5'
C4'
DT
DT
DT
7
7
7
N
1
-5.10
0.60
127.20
122.10
A
A
A
C2
N3
C4
DT
DT
DT
7
7
7
N
1
4.32
0.60
115.20
119.52
A
A
A
N3
C4
C5
DT
DT
DT
7
7
7
N
1
8.21
1.20
119.70
127.91
A
A
A
C3'
O3'
P
DT
DT
DT
7
7
8
Y
1
2.11
0.30
108.30
110.41
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
1
-4.34
0.60
127.20
122.86
A
A
A
C2
N3
C4
DT
DT
DT
8
8
8
N
1
8.56
1.20
119.70
128.26
A
A
A
C3'
O3'
P
DT
DT
DC
8
8
9
Y
1
-2.74
0.40
121.90
119.16
A
A
A
N3
C4
C5
DC
DC
DC
9
9
9
N
1
21.60
1.20
119.70
141.30
A
A
A
C3'
O3'
P
6OG
6OG
DC
10
10
11
Y
1
-13.60
1.60
120.90
107.30
A
A
A
P
O5'
C5'
DC
DC
DC
11
11
11
N
1
3.35
0.30
108.30
111.65
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
-4.22
0.70
102.20
97.98
B
B
B
C4'
C3'
C2'
DC
DC
DC
13
13
13
N
1
3.36
0.30
108.30
111.66
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
26.00
1.20
119.70
145.70
B
B
B
C3'
O3'
P
DC
DC
DG
13
13
14
Y
1
-9.56
1.50
119.60
110.04
B
B
B
OP1
P
OP2
DG
DG
DG
14
14
14
N
1
-9.65
1.60
120.90
111.25
B
B
B
P
O5'
C5'
DG
DG
DG
14
14
14
N
1
-8.84
0.80
109.40
100.56
B
B
B
O5'
C5'
C4'
DA
DA
DA
15
15
15
N
1
4.16
0.30
108.30
112.46
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
1
-3.24
0.50
117.70
114.46
B
B
B
C5
C6
N1
DA
DA
DA
15
15
15
N
1
8.00
1.20
119.70
127.70
B
B
B
C3'
O3'
P
DA
DA
DG
15
15
16
Y
1
-6.29
1.00
110.10
103.81
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
1
4.07
0.30
108.30
112.37
B
B
B
O4'
C1'
N9
DG
DG
DG
16
16
16
N
1
3.11
0.50
111.50
114.61
B
B
B
C5
C6
N1
DG
DG
DG
16
16
16
N
1
-5.10
0.80
109.40
104.30
B
B
B
O5'
C5'
C4'
DA
DA
DA
17
17
17
N
1
-3.54
0.50
129.30
125.76
B
B
B
N1
C2
N3
DA
DA
DA
17
17
17
N
1
-9.51
1.50
119.60
110.09
B
B
B
OP1
P
OP2
DA
DA
DA
18
18
18
N
1
7.85
1.20
110.70
118.55
B
B
B
O5'
P
OP2
DA
DA
DA
18
18
18
N
1
-3.10
0.50
117.70
114.60
B
B
B
C5
C6
N1
DA
DA
DA
18
18
18
N
1
-5.81
0.80
109.40
103.59
B
B
B
O5'
C5'
C4'
DT
DT
DT
19
19
19
N
1
-5.09
0.60
127.20
122.11
B
B
B
C2
N3
C4
DT
DT
DT
19
19
19
N
1
4.08
0.60
115.20
119.28
B
B
B
N3
C4
C5
DT
DT
DT
19
19
19
N
1
3.35
0.30
108.30
111.65
B
B
B
O4'
C1'
N1
DT
DT
DT
20
20
20
N
1
-4.71
0.60
127.20
122.49
B
B
B
C2
N3
C4
DT
DT
DT
20
20
20
N
1
4.48
0.60
115.20
119.68
B
B
B
N3
C4
C5
DT
DT
DT
20
20
20
N
1
-8.09
0.80
109.40
101.31
B
B
B
O5'
C5'
C4'
DC
DC
DC
21
21
21
N
1
4.57
0.30
108.30
112.87
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
1
-5.11
0.80
109.40
104.29
B
B
B
O5'
C5'
C4'
DG
DG
DG
24
24
24
N
1
7.43
0.30
108.30
115.73
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
1
3.16
0.50
111.50
114.66
B
B
B
C5
C6
N1
DG
DG
DG
24
24
24
N
1
B
B
O3'
P
DC
DG
13
14
-0.086
0.012
1.607
1.521
Y
0.169
2.900
8.000
1031
1
2.000
TR
isotropic
TR
isotropic
2.900
8.000
49
541
2
490
0
0.530
2.000
0.790
2.000
3.630
4.000
2.630
8.000
0.012
0.020
0.022
0.025
0.023
0.025
0.024
0.025
0.012
0.020
0.090
0.100
0.130
0.300
0.180
0.300
fix
fix
2.300
153D
2924
1
refinement
NUCLSQ
CRYSTAL STRUCTURE OF A MISPAIRED DODECAMER, D(CGAGAATTC(O6ME)GCG)2, CONTAINING A CARCINOGENIC O6-METHYLGUANINE
1
N
N
1
N
N
2
N
N
2
N
N
covale
1.589
both
A
DC
9
A
O3'
DC
9
1_555
A
6OG
10
A
P
6OG
10
1_555
covale
1.551
one
A
6OG
10
A
O3'
6OG
10
1_555
A
DC
11
A
P
DC
11
1_555
covale
1.578
both
B
DC
21
B
O3'
DC
9
1_555
B
6OG
22
B
P
6OG
10
1_555
covale
1.601
one
B
6OG
22
B
O3'
6OG
10
1_555
B
DC
23
B
P
DC
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
24
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
24
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
24
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
23
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
23
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
23
B
N4
DC
11
1_555
hydrog
DA-6OG MISPAIR
A
DA
3
A
N7
DA
3
1_555
B
6OG
22
B
N2
6OG
10
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
21
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
21
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
21
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
DT
20
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
DT
20
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
19
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
19
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
18
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
18
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
17
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
17
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N3
DC
9
1_555
B
DG
16
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N4
DC
9
1_555
B
DG
16
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
9
A
O2
DC
9
1_555
B
DG
16
B
N2
DG
4
1_555
hydrog
6OG-DA MISPAIR
A
6OG
10
A
N2
6OG
10
1_555
B
DA
15
B
N7
DA
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
14
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
14
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
14
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
13
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
13
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
13
B
N4
DC
1
1_555
DNA
B-DNA, DOUBLE HELIX, MODIFIED, MISMATCHED, DNA
153D
PDB
1
153D
1
12
153D
1
12
153D
A
1
1
12
13
24
153D
13
24
153D
B
1
1
12
19
P 21 21 21