0.018839 0.010877 0.000000 0.000000 0.021754 0.000000 0.000000 0.000000 0.029138 0.00000 0.00000 0.00000 Grzeskowiak, K. Goodsell, D.S. Kaczor-Grzeskowiak, M. Cascio, D. Dickerson, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 53.080 53.080 34.320 Ca 2 40.078 CALCIUM ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer N 1 N CA N 2 N O N 3 N P N 4 N O N 5 N O N 6 N O N 7 N C N 8 R C N 9 N O N 10 S C N 11 N O N 12 N C N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 N C N 49 R C N 50 N N N 51 N C N 52 N O N 53 N N N 54 N C N 55 N N N 56 N C N 57 N C N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N O N 73 N P N 74 N O N 75 N O N 76 N O N 77 N C N 78 R C N 79 N O N 80 S C N 81 N O N 82 N C N 83 R C Y 84 N N Y 85 N C Y 86 N N Y 87 N C N 88 N C N 89 N O N 90 N N N 91 N C N 92 N N N 93 N N Y 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N O N 110 N P N 111 N O N 112 N O N 113 N O N 114 N C N 115 R C N 116 N O N 117 S C N 118 N O N 119 N C N 120 R C N 121 N N N 122 N C N 123 N O N 124 N N N 125 N C N 126 N O N 127 N C N 128 N C N 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N O N 146 N H N 147 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing US Biochemistry BICHAW 0033 0006-2960 32 8923 8931 10.1021/bi00085a025 8364037 Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA. 1993 10.2210/pdb158d/pdb pdb_0000158d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 278.00 1 IMAGE PLATE RIGAKU RAXIS II x-ray 1 1.0 3045.004 DNA (5'-D(*CP*CP*AP*AP*GP*CP*TP*TP*GP*G)-3') 2 syn polymer 40.078 CALCIUM ION 2 syn non-polymer 18.015 water 75 nat water no no (DC)(DC)(DA)(DA)(DG)(DC)(DT)(DT)(DG)(DG) CCAAGCTTGG A,B polydeoxyribonucleotide n n n n n n n n n n 2.29 46.33 VAPOR DIFFUSION 7.50 pH 7.50, VAPOR DIFFUSION, temperature 278.00K 278.00 WATER 1 MPD 1 CA ACETATE 1 WATER 2 MPD 2 -8.419 1 19 A 1 B 20 -0.518 A_DC1:DG20_B 1 -16.117 0.091 0.089 -0.216 -3.674 1 19 A 2 B 19 -3.044 A_DC2:DG19_B 2 -7.949 0.256 0.049 -0.083 -1.595 1 20 A 3 B 18 2.102 A_DA3:DT18_B 3 -6.094 0.153 0.169 -0.028 11.017 1 20 A 4 B 17 0.745 A_DA4:DT17_B 4 -9.527 0.041 0.253 -0.047 11.759 1 19 A 5 B 16 0.734 A_DG5:DC16_B 5 -8.242 -0.057 0.432 -0.074 -7.997 1 19 A 6 B 15 0.207 A_DC6:DG15_B 6 -14.064 0.183 0.148 0.005 -13.231 1 20 A 7 B 14 2.483 A_DT7:DA14_B 7 -11.996 -0.226 0.316 -0.132 -6.781 1 20 A 8 B 13 2.106 A_DT8:DA13_B 8 -9.816 0.045 0.291 -0.085 -1.184 1 19 A 9 B 12 -2.881 A_DG9:DC12_B 9 -7.629 -0.292 0.007 -0.308 7.963 1 19 A 10 B 11 -1.138 A_DG10:DC11_B 10 -16.712 0.072 0.213 -0.221 3.243 31.551 A A 1 2 18.566 B B 20 19 3.259 9.925 -0.461 0.574 AA_DC1DC2:DG19DG20_BB 1 1.942 -3.633 29.925 -0.829 1.217 2.955 48.908 A A 2 3 -6.826 B B 19 18 3.256 -5.639 0.235 2.530 AA_DC2DA3:DT18DG19_BB 2 -1.555 1.882 48.578 3.463 -0.396 3.241 24.858 A A 3 4 22.153 B B 18 17 3.159 9.310 0.621 0.843 AA_DA3DA4:DT17DT18_BB 3 -0.234 0.558 23.073 -0.888 -1.515 3.281 37.526 A A 4 5 -1.157 B B 17 16 3.296 -0.743 0.031 -0.147 AA_DA4DG5:DC16DT17_BB 4 -3.562 5.545 37.355 -0.131 -0.517 3.623 39.225 A A 5 6 4.193 B B 16 15 3.727 2.809 0.026 -1.204 AA_DG5DC6:DG15DC16_BB 5 3.600 -5.374 38.968 -2.171 0.446 3.419 34.765 A A 6 7 2.386 B B 15 14 3.429 1.425 0.106 -0.217 AA_DC6DT7:DA14DG15_BB 6 1.571 -2.631 34.702 -0.591 0.074 3.239 29.442 A A 7 8 22.509 B B 14 13 3.255 11.165 -0.389 0.568 AA_DT7DT8:DA13DA14_BB 7 -0.525 1.058 27.282 -1.347 0.649 2.788 47.878 A A 8 9 -7.580 B B 13 12 3.134 -6.134 -0.308 2.535 AA_DT8DG9:DC12DA13_BB 8 2.346 -2.899 47.452 3.566 0.549 3.181 31.393 A A 9 10 18.963 B B 12 11 3.201 10.068 0.344 0.625 AA_DG9DG10:DC11DC12_BB 9 -3.389 6.384 29.584 -0.748 -1.276 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1994-05-31 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1994-02-03 REL REL CA CALCIUM ION HOH water OC7 21 2 CA CA 21 A OC6 22 2 CA CA 22 B HOH 25 3 HOH HOH 25 A HOH 26 3 HOH HOH 26 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 32 3 HOH HOH 32 A HOH 33 3 HOH HOH 33 A HOH 35 3 HOH HOH 35 A HOH 37 3 HOH HOH 37 A HOH 40 3 HOH HOH 40 A HOH 41 3 HOH HOH 41 A HOH 48 3 HOH HOH 48 A HOH 50 3 HOH HOH 50 A HOH 51 3 HOH HOH 51 A HOH 52 3 HOH HOH 52 A HOH 57 3 HOH HOH 57 A HOH 59 3 HOH HOH 59 A HOH 66 3 HOH HOH 66 A HOH 69 3 HOH HOH 69 A HOH 75 3 HOH HOH 75 A HOH 76 3 HOH HOH 76 A HOH 77 3 HOH HOH 77 A HOH 79 3 HOH HOH 79 A HOH 81 3 HOH HOH 81 A HOH 82 3 HOH HOH 82 A OC7 21 3 HOH HOH 86 A OC7 21 3 HOH HOH 87 A OC7 21 3 HOH HOH 88 A OC7 21 3 HOH HOH 89 A OC7 21 3 HOH HOH 91 A OC6 22 3 HOH HOH 92 A OC6 22 3 HOH HOH 97 A HOH 23 3 HOH HOH 23 B HOH 24 3 HOH HOH 24 B HOH 27 3 HOH HOH 27 B HOH 30 3 HOH HOH 30 B HOH 31 3 HOH HOH 31 B HOH 34 3 HOH HOH 34 B HOH 36 3 HOH HOH 36 B HOH 38 3 HOH HOH 38 B HOH 39 3 HOH HOH 39 B HOH 42 3 HOH HOH 42 B HOH 43 3 HOH HOH 43 B HOH 44 3 HOH HOH 44 B HOH 45 3 HOH HOH 45 B HOH 46 3 HOH HOH 46 B HOH 47 3 HOH HOH 47 B HOH 49 3 HOH HOH 49 B HOH 53 3 HOH HOH 53 B HOH 54 3 HOH HOH 54 B HOH 55 3 HOH HOH 55 B HOH 56 3 HOH HOH 56 B HOH 58 3 HOH HOH 58 B HOH 60 3 HOH HOH 60 B HOH 61 3 HOH HOH 61 B HOH 62 3 HOH HOH 62 B HOH 63 3 HOH HOH 63 B HOH 64 3 HOH HOH 64 B HOH 65 3 HOH HOH 65 B HOH 67 3 HOH HOH 67 B HOH 68 3 HOH HOH 68 B HOH 70 3 HOH HOH 70 B HOH 71 3 HOH HOH 71 B HOH 72 3 HOH HOH 72 B HOH 73 3 HOH HOH 73 B HOH 74 3 HOH HOH 74 B HOH 78 3 HOH HOH 78 B HOH 80 3 HOH HOH 80 B HOH 83 3 HOH HOH 83 B HOH 84 3 HOH HOH 84 B OC7 21 3 HOH HOH 85 B OC7 21 3 HOH HOH 90 B OC6 22 3 HOH HOH 93 B OC6 22 3 HOH HOH 94 B OC6 22 3 HOH HOH 95 B OC6 22 3 HOH HOH 96 B C 1 n 1 DC 1 A C 2 n 2 DC 2 A A 3 n 3 DA 3 A A 4 n 4 DA 4 A G 5 n 5 DG 5 A C 6 n 6 DC 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A G 9 n 9 DG 9 A G 10 n 10 DG 10 A C 11 n 1 DC 11 B C 12 n 2 DC 12 B A 13 n 3 DA 13 B A 14 n 4 DA 14 B G 15 n 5 DG 15 B C 16 n 6 DC 16 B T 17 n 7 DT 17 B T 18 n 8 DT 18 B G 19 n 9 DG 19 B G 20 n 10 DG 20 B author_defined_assembly 2 dimeric A HOH 86 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 87 E O HOH 1_555 71.8 A HOH 86 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 88 E O HOH 1_555 142.0 A HOH 87 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 88 E O HOH 1_555 70.7 A HOH 86 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 89 E O HOH 1_555 151.0 A HOH 87 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 89 E O HOH 1_555 133.3 A HOH 88 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 89 E O HOH 1_555 66.3 A HOH 86 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 91 E O HOH 1_555 90.9 A HOH 87 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 91 E O HOH 1_555 87.1 A HOH 88 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 91 E O HOH 1_555 93.2 A HOH 89 E O HOH 1_555 A CA 21 C CA CA 1_555 A HOH 91 E O HOH 1_555 78.2 A HOH 86 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 85 F O HOH 1_555 73.8 A HOH 87 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 85 F O HOH 1_555 145.1 A HOH 88 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 85 F O HOH 1_555 144.1 A HOH 89 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 85 F O HOH 1_555 78.8 A HOH 91 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 85 F O HOH 1_555 87.5 A HOH 86 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 93.1 A HOH 87 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 101.2 A HOH 88 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 88.3 A HOH 89 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 94.8 A HOH 91 E O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 171.5 B HOH 85 F O HOH 1_555 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 86.4 A HOH 92 E O HOH 1_555 B CA 22 D CA CA 1_555 A HOH 97 E O HOH 1_555 75.9 A HOH 92 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 93 F O HOH 1_555 79.1 A HOH 97 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 93 F O HOH 1_555 93.3 A HOH 92 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 94 F O HOH 1_555 153.4 A HOH 97 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 94 F O HOH 1_555 105.9 B HOH 93 F O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 94 F O HOH 1_555 74.3 A HOH 92 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 95 F O HOH 1_555 137.7 A HOH 97 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 95 F O HOH 1_555 85.8 B HOH 93 F O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 95 F O HOH 1_555 140.6 B HOH 94 F O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 95 F O HOH 1_555 68.2 A HOH 92 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 96 F O HOH 1_555 74.9 A HOH 97 E O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 96 F O HOH 1_555 86.9 B HOH 93 F O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 96 F O HOH 1_555 153.1 B HOH 94 F O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 96 F O HOH 1_555 131.4 B HOH 95 F O HOH 1_555 B CA 22 D CA CA 1_555 B HOH 96 F O HOH 1_555 66.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B HOH 30 F HOH 1 -2.78 0.40 121.90 119.12 A A A N3 C4 C5 DC DC DC 2 2 2 N 1 -3.01 0.50 117.70 114.69 A A A C5 C6 N1 DA DA DA 3 3 3 N 1 -6.37 0.80 102.40 96.03 A A A C3' C2' C1' DA DA DA 4 4 4 N 1 6.90 0.30 108.30 115.20 A A A O4' C1' N9 DA DA DA 4 4 4 N 1 3.62 0.60 118.60 122.22 A A A C6 N1 C2 DA DA DA 4 4 4 N 1 -3.35 0.50 129.30 125.95 A A A N1 C2 N3 DA DA DA 4 4 4 N 1 14.86 1.20 119.70 134.56 A A A C3' O3' P DA DA DG 4 4 5 Y 1 4.98 0.30 108.30 113.28 A A A O4' C1' N9 DG DG DG 5 5 5 N 1 -4.15 0.60 125.10 120.95 A A A C6 N1 C2 DG DG DG 5 5 5 N 1 3.13 0.50 111.50 114.63 A A A C5 C6 N1 DG DG DG 5 5 5 N 1 -3.82 0.60 119.90 116.08 A A A N1 C6 O6 DG DG DG 5 5 5 N 1 7.54 1.20 119.70 127.24 A A A C3' O3' P DC DC DT 6 6 7 Y 1 8.82 1.10 110.50 119.32 A A A O3' P OP2 DC DT DT 6 7 7 Y 1 -5.78 0.90 105.70 99.92 A A A O5' P OP2 DT DT DT 7 7 7 N 1 -6.20 0.60 127.20 121.00 A A A C2 N3 C4 DT DT DT 7 7 7 N 1 5.27 0.60 115.20 120.47 A A A N3 C4 C5 DT DT DT 7 7 7 N 1 -9.27 0.80 109.40 100.13 A A A O5' C5' C4' DT DT DT 8 8 8 N 1 -5.43 0.60 127.20 121.77 A A A C2 N3 C4 DT DT DT 8 8 8 N 1 3.91 0.60 115.20 119.11 A A A N3 C4 C5 DT DT DT 8 8 8 N 1 -3.87 0.60 119.90 116.03 A A A N3 C4 O4 DT DT DT 8 8 8 N 1 10.93 1.20 119.70 130.63 A A A C3' O3' P DT DT DG 8 8 9 Y 1 -5.88 0.70 108.00 102.12 A A A O4' C1' N9 DG DG DG 9 9 9 N 1 3.02 0.50 111.50 114.52 A A A C5 C6 N1 DG DG DG 9 9 9 N 1 -3.62 0.60 128.60 124.98 A A A C5 C6 O6 DG DG DG 9 9 9 N 1 -10.01 1.50 119.60 109.59 A A A OP1 P OP2 DG DG DG 10 10 10 N 1 -5.99 0.80 109.40 103.41 A A A O5' C5' C4' DG DG DG 10 10 10 N 1 3.61 0.30 108.30 111.91 A A A O4' C1' N9 DG DG DG 10 10 10 N 1 -4.90 0.80 102.40 97.50 B B B C3' C2' C1' DC DC DC 12 12 12 N 1 3.21 0.50 119.90 123.11 B B B C2 N3 C4 DC DC DC 12 12 12 N 1 -3.22 0.40 121.90 118.68 B B B N3 C4 C5 DC DC DC 12 12 12 N 1 4.10 0.60 118.90 123.00 B B B N1 C2 O2 DC DC DC 12 12 12 N 1 4.28 0.60 118.60 122.88 B B B C6 N1 C2 DA DA DA 13 13 13 N 1 -4.90 0.50 129.30 124.40 B B B N1 C2 N3 DA DA DA 13 13 13 N 1 -3.17 0.50 117.70 114.53 B B B C5 C6 N1 DA DA DA 13 13 13 N 1 9.92 1.20 110.70 120.62 B B B O5' P OP1 DA DA DA 14 14 14 N 1 -6.00 0.80 109.40 103.40 B B B O5' C5' C4' DA DA DA 14 14 14 N 1 -5.44 0.80 102.40 96.96 B B B C3' C2' C1' DA DA DA 14 14 14 N 1 3.90 0.30 108.30 112.20 B B B O4' C1' N9 DA DA DA 14 14 14 N 1 4.43 0.60 118.60 123.03 B B B C6 N1 C2 DA DA DA 14 14 14 N 1 -3.37 0.50 129.30 125.93 B B B N1 C2 N3 DA DA DA 14 14 14 N 1 -3.73 0.50 117.70 113.97 B B B C5 C6 N1 DA DA DA 14 14 14 N 1 9.03 1.20 119.70 128.73 B B B C3' O3' P DA DA DG 14 14 15 Y 1 10.81 1.10 110.50 121.31 B B B O3' P OP2 DA DG DG 14 15 15 Y 1 4.34 0.30 108.30 112.64 B B B O4' C1' N9 DG DG DG 15 15 15 N 1 -4.20 0.60 125.10 120.90 B B B C6 N1 C2 DG DG DG 15 15 15 N 1 3.72 0.50 111.50 115.22 B B B C5 C6 N1 DG DG DG 15 15 15 N 1 -5.55 0.80 109.40 103.85 B B B O5' C5' C4' DC DC DC 16 16 16 N 1 7.77 1.20 119.70 127.47 B B B C3' O3' P DC DC DT 16 16 17 Y 1 -4.96 0.80 109.40 104.44 B B B O5' C5' C4' DT DT DT 17 17 17 N 1 -6.10 0.70 108.00 101.90 B B B O4' C1' N1 DT DT DT 17 17 17 N 1 -4.52 0.60 127.20 122.68 B B B C2 N3 C4 DT DT DT 17 17 17 N 1 4.39 0.60 115.20 119.59 B B B N3 C4 C5 DT DT DT 17 17 17 N 1 7.42 1.20 119.70 127.12 B B B C3' O3' P DT DT DT 17 17 18 Y 1 -5.85 0.80 109.40 103.55 B B B O5' C5' C4' DT DT DT 18 18 18 N 1 -5.52 0.60 127.20 121.68 B B B C2 N3 C4 DT DT DT 18 18 18 N 1 5.39 0.60 115.20 120.59 B B B N3 C4 C5 DT DT DT 18 18 18 N 1 -3.73 0.60 119.90 116.17 B B B N3 C4 O4 DT DT DT 18 18 18 N 1 -5.07 0.70 108.00 102.93 B B B O4' C1' N9 DG DG DG 19 19 19 N 1 -5.04 0.80 109.40 104.36 B B B O5' C5' C4' DG DG DG 20 20 20 N 1 3.33 0.30 108.30 111.63 B B B O4' C1' N9 DG DG DG 20 20 20 N 1 -3.70 0.60 125.10 121.40 B B B C6 N1 C2 DG DG DG 20 20 20 N 1 3.62 0.50 111.50 115.12 B B B C5 C6 N1 DG DG DG 20 20 20 N 1 -4.27 0.60 128.60 124.33 B B B C5 C6 O6 DG DG DG 20 20 20 N 1 A A O3' C3' DC DC 2 2 -0.038 0.006 1.419 1.381 N 1 A A O4' C1' DG DG 9 9 0.071 0.011 1.420 1.491 N 1 A A O4' C4' DG DG 9 9 -0.070 0.010 1.446 1.376 N 1 B B O4' C4' DC DC 16 16 -0.063 0.010 1.446 1.383 N 1 B B N3 C4 DC DC 16 16 0.050 0.007 1.335 1.385 N 1 B B C2' C1' DG DG 19 19 -0.070 0.010 1.518 1.448 N 0.1790000 1.900 8.000 4095 1 2.000 TR isotropic TR isotropic 1.900 8.000 62 481 15 404 0 fix fix 1.900 158D 4165 4095 2.000 1 refinement NUCLSQ CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNA 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N metalc 2.596 A CA 21 C CA CA 1_555 A HOH 86 E O HOH 1_555 metalc 2.442 A CA 21 C CA CA 1_555 A HOH 87 E O HOH 1_555 metalc 2.526 A CA 21 C CA CA 1_555 A HOH 88 E O HOH 1_555 metalc 2.344 A CA 21 C CA CA 1_555 A HOH 89 E O HOH 1_555 metalc 2.790 A CA 21 C CA CA 1_555 A HOH 91 E O HOH 1_555 metalc 2.483 A CA 21 C CA CA 1_555 B HOH 85 F O HOH 1_555 metalc 2.393 A CA 21 C CA CA 1_555 B HOH 90 F O HOH 1_555 metalc 2.757 A HOH 92 E O HOH 1_555 B CA 22 D CA CA 1_555 metalc 2.580 A HOH 97 E O HOH 1_555 B CA 22 D CA CA 1_555 metalc 2.511 B CA 22 D CA CA 1_555 B HOH 93 F O HOH 1_555 metalc 2.711 B CA 22 D CA CA 1_555 B HOH 94 F O HOH 1_555 metalc 2.565 B CA 22 D CA CA 1_555 B HOH 95 F O HOH 1_555 metalc 2.586 B CA 22 D CA CA 1_555 B HOH 96 F O HOH 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 20 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 20 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 20 B N2 DG 10 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 B DG 19 B N1 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 B DG 19 B O6 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 B DG 19 B N2 DG 9 1_555 hydrog WATSON-CRICK A DA 3 A N1 DA 3 1_555 B DT 18 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 3 A N6 DA 3 1_555 B DT 18 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 4 A N1 DA 4 1_555 B DT 17 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 4 A N6 DA 4 1_555 B DT 17 B O4 DT 7 1_555 hydrog WATSON-CRICK A DG 5 A N1 DG 5 1_555 B DC 16 B N3 DC 6 1_555 hydrog WATSON-CRICK A DG 5 A N2 DG 5 1_555 B DC 16 B O2 DC 6 1_555 hydrog WATSON-CRICK A DG 5 A O6 DG 5 1_555 B DC 16 B N4 DC 6 1_555 hydrog WATSON-CRICK A DC 6 A N3 DC 6 1_555 B DG 15 B N1 DG 5 1_555 hydrog WATSON-CRICK A DC 6 A N4 DC 6 1_555 B DG 15 B O6 DG 5 1_555 hydrog WATSON-CRICK A DC 6 A O2 DC 6 1_555 B DG 15 B N2 DG 5 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 14 B N1 DA 4 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 14 B N6 DA 4 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 13 B N1 DA 3 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 13 B N6 DA 3 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 12 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 12 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 12 B N4 DC 2 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 11 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 11 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 11 B N4 DC 1 1_555 DNA B-DNA, DOUBLE HELIX, DNA 158D PDB 1 158D 1 10 158D 1 10 158D A 1 1 10 11 20 158D 11 20 158D B 1 1 10 BINDING SITE FOR RESIDUE CA A 21 A CA 21 Software 7 BINDING SITE FOR RESIDUE CA B 22 B CA 22 Software 6 A HOH 86 E HOH 7 1_555 A HOH 87 E HOH 7 1_555 A HOH 88 E HOH 7 1_555 A HOH 89 E HOH 7 1_555 A HOH 91 E HOH 7 1_555 B HOH 85 F HOH 7 1_555 B HOH 90 F HOH 7 1_555 A HOH 92 E HOH 6 1_555 A HOH 97 E HOH 6 1_555 B HOH 93 F HOH 6 1_555 B HOH 94 F HOH 6 1_555 B HOH 95 F HOH 6 1_555 B HOH 96 F HOH 6 1_555 168 P 6