0.040535
0.000000
0.000000
0.000000
0.024697
0.000000
0.000000
0.000000
0.015352
0.00000
0.00000
0.00000
McAuley-Hecht, K.E.
Leonard, G.A.
Gibson, N.J.
Thomson, J.B.
Watson, W.P.
Hunter, W.N.
Brown, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
24.670
40.490
65.140
C10 H14 N5 O8 P
363.221
n
8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
N
13
N
N
N
14
N
C
N
15
N
N
N
16
N
C
N
17
N
C
N
18
N
O
N
19
N
N
N
20
N
C
N
21
N
N
N
22
N
N
N
23
N
C
N
24
N
O
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
O
N
40
N
P
N
41
N
O
N
42
N
O
N
43
N
O
N
44
N
C
N
45
R
C
N
46
N
O
N
47
S
C
N
48
N
O
N
49
N
C
N
50
R
C
Y
51
N
N
Y
52
N
C
Y
53
N
N
Y
54
N
C
Y
55
N
C
N
56
N
N
Y
57
N
N
Y
58
N
C
Y
59
N
N
Y
60
N
C
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
O
N
76
N
P
N
77
N
O
N
78
N
O
N
79
N
O
N
80
N
C
N
81
R
C
N
82
N
O
N
83
S
C
N
84
N
O
N
85
N
C
N
86
R
C
N
87
N
N
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
C
N
92
N
N
N
93
N
C
N
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
O
N
110
N
P
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
C
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
N
C
N
120
R
C
Y
121
N
N
Y
122
N
C
Y
123
N
N
Y
124
N
C
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
C
N
129
N
N
N
130
N
N
Y
131
N
C
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
O
N
147
N
P
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
C
N
152
R
C
N
153
N
O
N
154
S
C
N
155
N
O
N
156
N
C
N
157
R
C
N
158
N
N
N
159
N
C
N
160
N
O
N
161
N
N
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
O
N
183
N
H
N
184
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
doub
N
32
N
doub
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
doub
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
doub
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
Y
64
N
sing
Y
65
N
sing
Y
66
N
doub
N
67
N
sing
Y
68
N
sing
Y
69
N
sing
Y
70
N
doub
N
71
N
sing
Y
72
N
doub
N
73
N
sing
N
74
N
sing
Y
75
N
sing
Y
76
N
doub
N
77
N
sing
Y
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
Y
137
N
sing
Y
138
N
sing
Y
139
N
doub
N
140
N
sing
Y
141
N
sing
N
142
N
sing
Y
143
N
doub
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
33
10266
10270
10.1021/bi00200a006
8068665
Crystal structure of a DNA duplex containing 8-hydroxydeoxyguanine-adenine base pairs.
1994
10.2210/pdb178d/pdb
pdb_0000178d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
ROTATING ANODE
RIGAKU RU200
3703.417
DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*(8OG)P*GP*CP*G)-3')
2
syn
polymer
18.015
water
72
nat
water
no
yes
(DC)(DG)(DC)(DA)(DA)(DA)(DT)(DT)(8OG)(DG)(DC)(DG)
CGCAAATTGGCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
2.20
43.99
VAPOR DIFFUSION, SITTING DROP
6.50
pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K
277.00
WATER
1
MPD
1
MGCL2
1
SPERMINE_HCL
1
NA CACODYLATE
1
WATER
2
MPD
2
7.263
1
19
A
1
B
24
0.167
A_DC1:DG24_B
1
-14.618
0.214
-0.266
-0.325
-0.100
1
19
A
2
B
23
-4.706
A_DG2:DC23_B
2
-11.207
-0.263
0.228
-0.434
-5.986
1
19
A
3
B
22
1.206
A_DC3:DG22_B
3
-7.394
-0.166
-0.038
-0.317
-0.315
A
4
B
21
-84.342
A_DA4:8OG21_B
4
-20.468
-0.766
-0.026
5.111
5.848
1
20
A
5
B
20
-1.233
A_DA5:DT20_B
5
-22.838
-0.040
-0.071
-0.379
5.174
1
20
A
6
B
19
-4.569
A_DA6:DT19_B
6
-21.972
0.487
0.336
-0.457
-0.698
1
20
A
7
B
18
2.495
A_DT7:DA18_B
7
-18.903
-0.080
0.060
-0.455
-12.150
1
20
A
8
B
17
-8.050
A_DT8:DA17_B
8
-26.157
-0.038
0.499
-0.520
2.612
A
9
B
16
83.556
A_8OG9:DA16_B
9
18.588
0.086
-0.188
-4.428
4.448
1
19
A
10
B
15
-2.601
A_DG10:DC15_B
10
-7.470
0.808
0.375
-0.445
-6.403
1
19
A
11
B
14
-7.426
A_DC11:DG14_B
11
-18.765
-0.080
0.469
-0.454
1.997
1
19
A
12
B
13
0.506
A_DG12:DC13_B
12
5.237
0.061
0.278
-0.294
3.646
38.488
A
A
1
2
9.078
B
B
24
23
3.623
5.957
-0.503
0.252
AA_DC1DG2:DC23DG24_BB
1
-2.731
4.161
37.947
-0.445
0.383
3.598
36.885
A
A
2
3
-8.095
B
B
23
22
3.587
-5.097
0.903
0.245
AA_DG2DC3:DG22DC23_BB
2
4.085
-6.488
36.322
1.151
-0.814
2.623
67.187
A
A
3
4
8.226
B
B
22
21
2.761
9.078
0.857
-1.305
AA_DC3DA4:8OG21DG22_BB
3
3.638
-3.297
66.554
-1.471
-0.657
-2.162
-3.385
A
A
4
5
-86.714
B
B
21
20
3.505
3.369
0.181
2.341
AA_DA4DA5:DT208OG21_BB
4
0.277
7.122
-0.177
-61.150
4.832
3.068
41.545
A
A
5
6
3.338
B
B
20
19
3.098
2.364
-0.046
-0.342
AA_DA5DA6:DT19DT20_BB
5
-3.509
4.955
41.338
-0.719
-0.287
3.522
29.910
A
A
6
7
-7.191
B
B
19
18
3.433
-3.695
0.384
-0.762
AA_DA6DT7:DA18DT19_BB
6
3.274
-6.371
29.509
-0.658
-0.019
3.593
36.208
A
A
7
8
2.927
B
B
18
17
3.580
1.817
-0.715
-0.402
AA_DT7DT8:DA17DA18_BB
7
-2.222
3.580
36.098
-0.927
0.807
0.505
-174.973
A
A
8
9
-0.847
B
B
17
16
2.252
1.652
0.155
-3.341
AA_DT88OG9:DA16DA17_BB
8
-174.914
-89.635
-16.329
1.661
-1.118
-1.287
176.545
A
A
9
10
-55.149
B
B
16
15
-0.619
-108.206
-2.904
-1.657
AA_8OG9DG10:DC15DA16_BB
9
139.497
-71.096
1.450
-1.406
0.709
3.485
39.780
A
A
10
11
-20.744
B
B
15
14
3.771
-13.816
-1.330
0.551
AA_DG10DC11:DG14DC15_BB
10
-4.285
6.434
37.156
2.654
1.383
3.381
35.337
A
A
11
12
-3.531
B
B
14
13
3.283
-2.137
1.045
-0.087
AA_DC11DG12:DC13DG14_BB
11
4.210
-6.955
35.030
0.179
-1.085
chem_comp_atom
chem_comp_bond
database_2
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1994-10-04
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
BNL
Y
NDB
1994-05-19
REL
REL
HOH
water
HOH
26
2
HOH
HOH
26
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
31
2
HOH
HOH
31
A
HOH
33
2
HOH
HOH
33
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
HOH
37
2
HOH
HOH
37
A
HOH
38
2
HOH
HOH
38
A
HOH
39
2
HOH
HOH
39
A
HOH
41
2
HOH
HOH
41
A
HOH
44
2
HOH
HOH
44
A
HOH
46
2
HOH
HOH
46
A
HOH
48
2
HOH
HOH
48
A
HOH
49
2
HOH
HOH
49
A
HOH
50
2
HOH
HOH
50
A
HOH
52
2
HOH
HOH
52
A
HOH
53
2
HOH
HOH
53
A
HOH
54
2
HOH
HOH
54
A
HOH
55
2
HOH
HOH
55
A
HOH
56
2
HOH
HOH
56
A
HOH
57
2
HOH
HOH
57
A
HOH
58
2
HOH
HOH
58
A
HOH
59
2
HOH
HOH
59
A
HOH
60
2
HOH
HOH
60
A
HOH
61
2
HOH
HOH
61
A
HOH
65
2
HOH
HOH
65
A
HOH
66
2
HOH
HOH
66
A
HOH
67
2
HOH
HOH
67
A
HOH
70
2
HOH
HOH
70
A
HOH
71
2
HOH
HOH
71
A
HOH
72
2
HOH
HOH
72
A
HOH
80
2
HOH
HOH
80
A
HOH
82
2
HOH
HOH
82
A
HOH
84
2
HOH
HOH
84
A
HOH
85
2
HOH
HOH
85
A
HOH
86
2
HOH
HOH
86
A
HOH
90
2
HOH
HOH
90
A
HOH
92
2
HOH
HOH
92
A
HOH
96
2
HOH
HOH
96
A
HOH
25
2
HOH
HOH
25
B
HOH
27
2
HOH
HOH
27
B
HOH
30
2
HOH
HOH
30
B
HOH
32
2
HOH
HOH
32
B
HOH
36
2
HOH
HOH
36
B
HOH
40
2
HOH
HOH
40
B
HOH
42
2
HOH
HOH
42
B
HOH
43
2
HOH
HOH
43
B
HOH
45
2
HOH
HOH
45
B
HOH
47
2
HOH
HOH
47
B
HOH
51
2
HOH
HOH
51
B
HOH
62
2
HOH
HOH
62
B
HOH
63
2
HOH
HOH
63
B
HOH
64
2
HOH
HOH
64
B
HOH
68
2
HOH
HOH
68
B
HOH
69
2
HOH
HOH
69
B
HOH
73
2
HOH
HOH
73
B
HOH
74
2
HOH
HOH
74
B
HOH
75
2
HOH
HOH
75
B
HOH
76
2
HOH
HOH
76
B
HOH
77
2
HOH
HOH
77
B
HOH
78
2
HOH
HOH
78
B
HOH
79
2
HOH
HOH
79
B
HOH
81
2
HOH
HOH
81
B
HOH
83
2
HOH
HOH
83
B
HOH
87
2
HOH
HOH
87
B
HOH
88
2
HOH
HOH
88
B
HOH
89
2
HOH
HOH
89
B
HOH
91
2
HOH
HOH
91
B
HOH
93
2
HOH
HOH
93
B
HOH
94
2
HOH
HOH
94
B
HOH
95
2
HOH
HOH
95
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
A
4
n
4
DA
4
A
A
5
n
5
DA
5
A
A
6
n
6
DA
6
A
T
7
n
7
DT
7
A
T
8
n
8
DT
8
A
+G
9
n
9
8OG
9
A
G
10
n
10
DG
10
A
C
11
n
11
DC
11
A
G
12
n
12
DG
12
A
C
13
n
1
DC
13
B
G
14
n
2
DG
14
B
C
15
n
3
DC
15
B
A
16
n
4
DA
16
B
A
17
n
5
DA
17
B
A
18
n
6
DA
18
B
T
19
n
7
DT
19
B
T
20
n
8
DT
20
B
+G
21
n
9
8OG
21
B
G
22
n
10
DG
22
B
C
23
n
11
DC
23
B
G
24
n
12
DG
24
B
author_defined_assembly
2
dimeric
A
8OG
9
A
8OG
9
DG
B
8OG
21
B
8OG
9
DG
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-5.43
0.80
102.40
96.97
A
A
A
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
1
2.94
0.30
108.30
111.24
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
2.64
0.30
108.30
110.94
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
3.20
0.50
111.50
114.70
A
A
A
C5
C6
N1
DG
DG
DG
2
2
2
N
1
1.91
0.30
108.30
110.21
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
1
-3.05
0.50
129.30
126.25
A
A
A
N1
C2
N3
DA
DA
DA
4
4
4
N
1
2.19
0.30
108.30
110.49
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
-3.11
0.50
129.30
126.19
A
A
A
N1
C2
N3
DA
DA
DA
5
5
5
N
1
-3.42
0.50
129.30
125.88
A
A
A
N1
C2
N3
DA
DA
DA
6
6
6
N
1
-4.19
0.60
127.20
123.01
A
A
A
C2
N3
C4
DT
DT
DT
7
7
7
N
1
3.79
0.30
108.30
112.09
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
1
-4.45
0.60
127.20
122.75
A
A
A
C2
N3
C4
DT
DT
DT
8
8
8
N
1
3.70
0.60
115.20
118.90
A
A
A
N3
C4
C5
DT
DT
DT
8
8
8
N
1
8.97
0.30
108.30
117.27
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
3.13
0.50
111.50
114.63
A
A
A
C5
C6
N1
DG
DG
DG
10
10
10
N
1
3.43
0.50
111.50
114.93
A
A
A
C5
C6
N1
DG
DG
DG
12
12
12
N
1
2.12
0.30
108.30
110.42
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
1
3.02
0.50
111.50
114.52
B
B
B
C5
C6
N1
DG
DG
DG
14
14
14
N
1
2.48
0.30
108.30
110.78
B
B
B
O4'
C1'
N1
DC
DC
DC
15
15
15
N
1
1.87
0.30
108.30
110.17
B
B
B
O4'
C1'
N9
DA
DA
DA
16
16
16
N
1
-3.01
0.50
129.30
126.29
B
B
B
N1
C2
N3
DA
DA
DA
16
16
16
N
1
1.89
0.30
108.30
110.19
B
B
B
O4'
C1'
N9
DA
DA
DA
17
17
17
N
1
-3.18
0.50
129.30
126.12
B
B
B
N1
C2
N3
DA
DA
DA
17
17
17
N
1
3.04
0.30
108.30
111.34
B
B
B
O4'
C1'
N9
DA
DA
DA
18
18
18
N
1
3.97
0.60
118.60
122.57
B
B
B
C6
N1
C2
DA
DA
DA
18
18
18
N
1
-3.50
0.50
129.30
125.80
B
B
B
N1
C2
N3
DA
DA
DA
18
18
18
N
1
-3.17
0.50
117.70
114.53
B
B
B
C5
C6
N1
DA
DA
DA
18
18
18
N
1
2.85
0.30
108.30
111.15
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
1
-4.28
0.60
127.20
122.92
B
B
B
C2
N3
C4
DT
DT
DT
19
19
19
N
1
-4.58
0.60
127.20
122.62
B
B
B
C2
N3
C4
DT
DT
DT
20
20
20
N
1
3.86
0.60
115.20
119.06
B
B
B
N3
C4
C5
DT
DT
DT
20
20
20
N
1
3.40
0.30
108.30
111.70
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
1
3.11
0.50
111.50
114.61
B
B
B
C5
C6
N1
DG
DG
DG
22
22
22
N
1
2.89
0.30
108.30
111.19
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
1
2.89
0.30
108.30
111.19
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
1
3.07
0.50
111.50
114.57
B
B
B
C5
C6
N1
DG
DG
DG
24
24
24
N
0.168
2.500
10.000
1843
1
2.000
TR
isotropic
TR
isotropic
2.500
10.000
72
564
2
490
0
2.445
2.445
3.415
3.415
4.496
4.496
0.006
0.006
0.014
0.014
0.005
0.005
0.010
0.010
0.005
0.005
0.245
0.245
0.070
0.070
0.175
0.175
fix
fix
2.500
178D
9923
1965
1.000
1
refinement
NUCLSQ
CRYSTAL STRUCTURE OF A DNA DUPLEX CONTAINING 8-HYDROXYDEOXYGUANINE.ADENINE BASE-PAIRS
1
N
N
1
N
N
2
N
N
2
N
N
covale
1.608
both
A
DT
8
A
O3'
DT
8
1_555
A
8OG
9
A
P
8OG
9
1_555
covale
1.607
both
A
8OG
9
A
O3'
8OG
9
1_555
A
DG
10
A
P
DG
10
1_555
covale
1.606
both
B
DT
20
B
O3'
DT
8
1_555
B
8OG
21
B
P
8OG
9
1_555
covale
1.595
both
B
8OG
21
B
O3'
8OG
9
1_555
B
DG
22
B
P
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
24
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
24
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
24
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
23
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
23
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
23
B
N4
DC
11
1_555
hydrog
DC-8OG PAIR
A
DC
3
A
N4
DC
3
1_555
B
8OG
21
B
O6
8OG
9
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
22
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
22
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
22
B
N2
DG
10
1_555
hydrog
DA-8OG MISPAIR
A
DA
4
A
N6
DA
4
1_555
B
8OG
21
B
O6
8OG
9
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
DT
20
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
DT
20
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
19
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
19
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
18
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
18
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
17
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
17
B
N6
DA
5
1_555
hydrog
8OG-DA MISPAIR
A
8OG
9
A
O6
8OG
9
1_555
B
DA
16
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
15
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
15
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
15
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
14
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
14
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
14
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
13
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
13
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
13
B
N4
DC
1
1_555
DNA
B-DNA, DOUBLE HELIX, MODIFIED, MISMATCHED, DNA
178D
PDB
1
178D
1
12
178D
1
12
178D
A
1
1
12
13
24
178D
13
24
178D
B
1
1
12
19
P 21 21 21