data_183D # _entry.id 183D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 183D pdb_0000183d 10.2210/pdb183d/pdb RCSB BDJB57 ? ? WWPDB D_1000170185 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-02-27 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 183D _pdbx_database_status.recvd_initial_deposition_date 1994-08-01 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lipscomb, L.A.' 1 'Peek, M.E.' 2 'Morningstar, M.L.' 3 'Verghis, S.M.' 4 'Miller, E.M.' 5 'Rich, A.' 6 'Essigmann, J.M.' 7 'Williams, L.D.' 8 # _citation.id primary _citation.title 'X-ray structure of a DNA decamer containing 7,8-dihydro-8-oxoguanine.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 92 _citation.page_first 719 _citation.page_last 723 _citation.year 1995 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7846041 _citation.pdbx_database_id_DOI 10.1073/pnas.92.3.719 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lipscomb, L.A.' 1 ? primary 'Peek, M.E.' 2 ? primary 'Morningstar, M.L.' 3 ? primary 'Verghis, S.M.' 4 ? primary 'Miller, E.M.' 5 ? primary 'Rich, A.' 6 ? primary 'Essigmann, J.M.' 7 ? primary 'Williams, L.D.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*AP*(8OG)P*CP*GP*CP*TP*GP*G)-3') ; 3061.992 1 ? ? ? ? 2 water nat water 18.015 42 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DA)(8OG)(DC)(DG)(DC)(DT)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCAGCGCTGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 8OG n 1 5 DC n 1 6 DG n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 8OG 4 4 4 8OG +G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 11 11 HOH HOH A . B 2 HOH 2 12 12 HOH HOH A . B 2 HOH 3 13 13 HOH HOH A . B 2 HOH 4 14 14 HOH HOH A . B 2 HOH 5 15 15 HOH HOH A . B 2 HOH 6 16 16 HOH HOH A . B 2 HOH 7 17 17 HOH HOH A . B 2 HOH 8 18 18 HOH HOH A . B 2 HOH 9 19 19 HOH HOH A . B 2 HOH 10 20 20 HOH HOH A . B 2 HOH 11 21 21 HOH HOH A . B 2 HOH 12 22 22 HOH HOH A . B 2 HOH 13 23 23 HOH HOH A . B 2 HOH 14 24 24 HOH HOH A . B 2 HOH 15 25 25 HOH HOH A . B 2 HOH 16 26 26 HOH HOH A . B 2 HOH 17 27 27 HOH HOH A . B 2 HOH 18 28 28 HOH HOH A . B 2 HOH 19 29 29 HOH HOH A . B 2 HOH 20 30 30 HOH HOH A . B 2 HOH 21 31 31 HOH HOH A . B 2 HOH 22 32 32 HOH HOH A . B 2 HOH 23 33 33 HOH HOH A . B 2 HOH 24 34 34 HOH HOH A . B 2 HOH 25 35 35 HOH HOH A . B 2 HOH 26 36 36 HOH HOH A . B 2 HOH 27 37 37 HOH HOH A . B 2 HOH 28 38 38 HOH HOH A . B 2 HOH 29 39 39 HOH HOH A . B 2 HOH 30 40 40 HOH HOH A . B 2 HOH 31 41 41 HOH HOH A . B 2 HOH 32 42 42 HOH HOH A . B 2 HOH 33 43 43 HOH HOH A . B 2 HOH 34 44 44 HOH HOH A . B 2 HOH 35 45 45 HOH HOH A . B 2 HOH 36 46 46 HOH HOH A . B 2 HOH 37 47 47 HOH HOH A . B 2 HOH 38 48 48 HOH HOH A . B 2 HOH 39 49 49 HOH HOH A . B 2 HOH 40 50 50 HOH HOH A . B 2 HOH 41 51 51 HOH HOH A . B 2 HOH 42 52 52 HOH HOH A . # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 183D _cell.length_a 32.270 _cell.length_b 25.560 _cell.length_c 34.710 _cell.angle_alpha 90.00 _cell.angle_beta 115.77 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 183D _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 183D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.57 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.60 _exptl_crystal_grow.pdbx_details 'pH 7.60, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 BIS-TRIS-PROPANE_HCL ? ? ? 1 4 1 MGCL2 ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 277.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SDMS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 183D _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 1.600 _reflns.number_obs 3290 _reflns.number_all 12930 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 183D _refine.ls_number_reflns_obs 3290 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 1.600 _refine.ls_percent_reflns_obs 95.400 _refine.ls_R_factor_obs 0.234 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.234 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 203 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 246 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.60 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 183D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 183D _struct.title 'X-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 183D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, DOUBLE HELIX, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 183D _struct_ref.pdbx_db_accession 183D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 183D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 183D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 3 "O3'" ? ? ? 1_555 A 8OG 4 P ? ? A DA 3 A 8OG 4 1_555 ? ? ? ? ? ? ? 1.625 ? ? covale2 covale both ? A 8OG 4 "O3'" ? ? ? 1_555 A DC 5 P ? ? A 8OG 4 A DC 5 1_555 ? ? ? ? ? ? ? 1.572 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 10 N1 ? ? A DC 1 A DG 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 1 A DG 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 10 N2 ? ? A DC 1 A DG 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 3 A DT 8 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 3 A DT 8 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 8OG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A 8OG 4 A DC 7 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A 8OG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A 8OG 4 A DC 7 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 8OG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A 8OG 4 A DC 7 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 5 A DG 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 5 A DG 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 5 A DG 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 6 A DC 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 6 A DC 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 6 A DC 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A 8OG 4 N1 ? ? A DC 7 A 8OG 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A 8OG 4 O6 ? ? A DC 7 A 8OG 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A 8OG 4 N2 ? ? A DC 7 A 8OG 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 8 A DA 3 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 8 A DA 3 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 10 A DC 1 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 10 A DC 1 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 10 A DC 1 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.555 1.512 0.043 0.007 N 2 1 "C5'" A DG 6 ? ? "C4'" A DG 6 ? ? 1.562 1.512 0.050 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.66 108.30 4.36 0.30 N 2 1 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.19 108.30 1.89 0.30 N 3 1 "O3'" A 8OG 4 ? ? P A DC 5 ? ? "O5'" A DC 5 ? ? 89.65 104.00 -14.35 1.90 Y 4 1 P A DC 5 ? ? "O5'" A DC 5 ? ? "C5'" A DC 5 ? ? 130.79 120.90 9.89 1.60 N 5 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 123.71 118.90 4.81 0.60 N 6 1 "C3'" A DC 5 ? ? "O3'" A DC 5 ? ? P A DG 6 ? ? 129.17 119.70 9.47 1.20 Y 7 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.32 108.30 6.02 0.30 N 8 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.52 108.30 4.22 0.30 N 9 1 N1 A DC 7 ? ? C2 A DC 7 ? ? O2 A DC 7 ? ? 123.30 118.90 4.40 0.60 N 10 1 C5 A DT 8 ? ? C6 A DT 8 ? ? N1 A DT 8 ? ? 119.81 123.70 -3.89 0.60 N 11 1 N3 A DT 8 ? ? C2 A DT 8 ? ? O2 A DT 8 ? ? 117.78 122.30 -4.52 0.60 N 12 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.70 122.90 -4.20 0.60 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C1'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id 8OG _pdbx_validate_chiral.auth_seq_id 4 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.065 'SIDE CHAIN' 2 1 DG A 6 ? ? 0.094 'SIDE CHAIN' 3 1 DC A 7 ? ? 0.076 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' ? ? 'X-RAY DIFFRACTION' 'ALL WATERS' ? ? 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' ? 'X-RAY DIFFRACTION' 'ALL WATERS' ? 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 DA OP3 O N N 39 DA P P N N 40 DA OP1 O N N 41 DA OP2 O N N 42 DA "O5'" O N N 43 DA "C5'" C N N 44 DA "C4'" C N R 45 DA "O4'" O N N 46 DA "C3'" C N S 47 DA "O3'" O N N 48 DA "C2'" C N N 49 DA "C1'" C N R 50 DA N9 N Y N 51 DA C8 C Y N 52 DA N7 N Y N 53 DA C5 C Y N 54 DA C6 C Y N 55 DA N6 N N N 56 DA N1 N Y N 57 DA C2 C Y N 58 DA N3 N Y N 59 DA C4 C Y N 60 DA HOP3 H N N 61 DA HOP2 H N N 62 DA "H5'" H N N 63 DA "H5''" H N N 64 DA "H4'" H N N 65 DA "H3'" H N N 66 DA "HO3'" H N N 67 DA "H2'" H N N 68 DA "H2''" H N N 69 DA "H1'" H N N 70 DA H8 H N N 71 DA H61 H N N 72 DA H62 H N N 73 DA H2 H N N 74 DC OP3 O N N 75 DC P P N N 76 DC OP1 O N N 77 DC OP2 O N N 78 DC "O5'" O N N 79 DC "C5'" C N N 80 DC "C4'" C N R 81 DC "O4'" O N N 82 DC "C3'" C N S 83 DC "O3'" O N N 84 DC "C2'" C N N 85 DC "C1'" C N R 86 DC N1 N N N 87 DC C2 C N N 88 DC O2 O N N 89 DC N3 N N N 90 DC C4 C N N 91 DC N4 N N N 92 DC C5 C N N 93 DC C6 C N N 94 DC HOP3 H N N 95 DC HOP2 H N N 96 DC "H5'" H N N 97 DC "H5''" H N N 98 DC "H4'" H N N 99 DC "H3'" H N N 100 DC "HO3'" H N N 101 DC "H2'" H N N 102 DC "H2''" H N N 103 DC "H1'" H N N 104 DC H41 H N N 105 DC H42 H N N 106 DC H5 H N N 107 DC H6 H N N 108 DG OP3 O N N 109 DG P P N N 110 DG OP1 O N N 111 DG OP2 O N N 112 DG "O5'" O N N 113 DG "C5'" C N N 114 DG "C4'" C N R 115 DG "O4'" O N N 116 DG "C3'" C N S 117 DG "O3'" O N N 118 DG "C2'" C N N 119 DG "C1'" C N R 120 DG N9 N Y N 121 DG C8 C Y N 122 DG N7 N Y N 123 DG C5 C Y N 124 DG C6 C N N 125 DG O6 O N N 126 DG N1 N N N 127 DG C2 C N N 128 DG N2 N N N 129 DG N3 N N N 130 DG C4 C Y N 131 DG HOP3 H N N 132 DG HOP2 H N N 133 DG "H5'" H N N 134 DG "H5''" H N N 135 DG "H4'" H N N 136 DG "H3'" H N N 137 DG "HO3'" H N N 138 DG "H2'" H N N 139 DG "H2''" H N N 140 DG "H1'" H N N 141 DG H8 H N N 142 DG H1 H N N 143 DG H21 H N N 144 DG H22 H N N 145 DT OP3 O N N 146 DT P P N N 147 DT OP1 O N N 148 DT OP2 O N N 149 DT "O5'" O N N 150 DT "C5'" C N N 151 DT "C4'" C N R 152 DT "O4'" O N N 153 DT "C3'" C N S 154 DT "O3'" O N N 155 DT "C2'" C N N 156 DT "C1'" C N R 157 DT N1 N N N 158 DT C2 C N N 159 DT O2 O N N 160 DT N3 N N N 161 DT C4 C N N 162 DT O4 O N N 163 DT C5 C N N 164 DT C7 C N N 165 DT C6 C N N 166 DT HOP3 H N N 167 DT HOP2 H N N 168 DT "H5'" H N N 169 DT "H5''" H N N 170 DT "H4'" H N N 171 DT "H3'" H N N 172 DT "HO3'" H N N 173 DT "H2'" H N N 174 DT "H2''" H N N 175 DT "H1'" H N N 176 DT H3 H N N 177 DT H71 H N N 178 DT H72 H N N 179 DT H73 H N N 180 DT H6 H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 DA OP3 P sing N N 41 DA OP3 HOP3 sing N N 42 DA P OP1 doub N N 43 DA P OP2 sing N N 44 DA P "O5'" sing N N 45 DA OP2 HOP2 sing N N 46 DA "O5'" "C5'" sing N N 47 DA "C5'" "C4'" sing N N 48 DA "C5'" "H5'" sing N N 49 DA "C5'" "H5''" sing N N 50 DA "C4'" "O4'" sing N N 51 DA "C4'" "C3'" sing N N 52 DA "C4'" "H4'" sing N N 53 DA "O4'" "C1'" sing N N 54 DA "C3'" "O3'" sing N N 55 DA "C3'" "C2'" sing N N 56 DA "C3'" "H3'" sing N N 57 DA "O3'" "HO3'" sing N N 58 DA "C2'" "C1'" sing N N 59 DA "C2'" "H2'" sing N N 60 DA "C2'" "H2''" sing N N 61 DA "C1'" N9 sing N N 62 DA "C1'" "H1'" sing N N 63 DA N9 C8 sing Y N 64 DA N9 C4 sing Y N 65 DA C8 N7 doub Y N 66 DA C8 H8 sing N N 67 DA N7 C5 sing Y N 68 DA C5 C6 sing Y N 69 DA C5 C4 doub Y N 70 DA C6 N6 sing N N 71 DA C6 N1 doub Y N 72 DA N6 H61 sing N N 73 DA N6 H62 sing N N 74 DA N1 C2 sing Y N 75 DA C2 N3 doub Y N 76 DA C2 H2 sing N N 77 DA N3 C4 sing Y N 78 DC OP3 P sing N N 79 DC OP3 HOP3 sing N N 80 DC P OP1 doub N N 81 DC P OP2 sing N N 82 DC P "O5'" sing N N 83 DC OP2 HOP2 sing N N 84 DC "O5'" "C5'" sing N N 85 DC "C5'" "C4'" sing N N 86 DC "C5'" "H5'" sing N N 87 DC "C5'" "H5''" sing N N 88 DC "C4'" "O4'" sing N N 89 DC "C4'" "C3'" sing N N 90 DC "C4'" "H4'" sing N N 91 DC "O4'" "C1'" sing N N 92 DC "C3'" "O3'" sing N N 93 DC "C3'" "C2'" sing N N 94 DC "C3'" "H3'" sing N N 95 DC "O3'" "HO3'" sing N N 96 DC "C2'" "C1'" sing N N 97 DC "C2'" "H2'" sing N N 98 DC "C2'" "H2''" sing N N 99 DC "C1'" N1 sing N N 100 DC "C1'" "H1'" sing N N 101 DC N1 C2 sing N N 102 DC N1 C6 sing N N 103 DC C2 O2 doub N N 104 DC C2 N3 sing N N 105 DC N3 C4 doub N N 106 DC C4 N4 sing N N 107 DC C4 C5 sing N N 108 DC N4 H41 sing N N 109 DC N4 H42 sing N N 110 DC C5 C6 doub N N 111 DC C5 H5 sing N N 112 DC C6 H6 sing N N 113 DG OP3 P sing N N 114 DG OP3 HOP3 sing N N 115 DG P OP1 doub N N 116 DG P OP2 sing N N 117 DG P "O5'" sing N N 118 DG OP2 HOP2 sing N N 119 DG "O5'" "C5'" sing N N 120 DG "C5'" "C4'" sing N N 121 DG "C5'" "H5'" sing N N 122 DG "C5'" "H5''" sing N N 123 DG "C4'" "O4'" sing N N 124 DG "C4'" "C3'" sing N N 125 DG "C4'" "H4'" sing N N 126 DG "O4'" "C1'" sing N N 127 DG "C3'" "O3'" sing N N 128 DG "C3'" "C2'" sing N N 129 DG "C3'" "H3'" sing N N 130 DG "O3'" "HO3'" sing N N 131 DG "C2'" "C1'" sing N N 132 DG "C2'" "H2'" sing N N 133 DG "C2'" "H2''" sing N N 134 DG "C1'" N9 sing N N 135 DG "C1'" "H1'" sing N N 136 DG N9 C8 sing Y N 137 DG N9 C4 sing Y N 138 DG C8 N7 doub Y N 139 DG C8 H8 sing N N 140 DG N7 C5 sing Y N 141 DG C5 C6 sing N N 142 DG C5 C4 doub Y N 143 DG C6 O6 doub N N 144 DG C6 N1 sing N N 145 DG N1 C2 sing N N 146 DG N1 H1 sing N N 147 DG C2 N2 sing N N 148 DG C2 N3 doub N N 149 DG N2 H21 sing N N 150 DG N2 H22 sing N N 151 DG N3 C4 sing N N 152 DT OP3 P sing N N 153 DT OP3 HOP3 sing N N 154 DT P OP1 doub N N 155 DT P OP2 sing N N 156 DT P "O5'" sing N N 157 DT OP2 HOP2 sing N N 158 DT "O5'" "C5'" sing N N 159 DT "C5'" "C4'" sing N N 160 DT "C5'" "H5'" sing N N 161 DT "C5'" "H5''" sing N N 162 DT "C4'" "O4'" sing N N 163 DT "C4'" "C3'" sing N N 164 DT "C4'" "H4'" sing N N 165 DT "O4'" "C1'" sing N N 166 DT "C3'" "O3'" sing N N 167 DT "C3'" "C2'" sing N N 168 DT "C3'" "H3'" sing N N 169 DT "O3'" "HO3'" sing N N 170 DT "C2'" "C1'" sing N N 171 DT "C2'" "H2'" sing N N 172 DT "C2'" "H2''" sing N N 173 DT "C1'" N1 sing N N 174 DT "C1'" "H1'" sing N N 175 DT N1 C2 sing N N 176 DT N1 C6 sing N N 177 DT C2 O2 doub N N 178 DT C2 N3 sing N N 179 DT N3 C4 sing N N 180 DT N3 H3 sing N N 181 DT C4 O4 doub N N 182 DT C4 C5 sing N N 183 DT C5 C7 sing N N 184 DT C5 C6 doub N N 185 DT C7 H71 sing N N 186 DT C7 H72 sing N N 187 DT C7 H73 sing N N 188 DT C6 H6 sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 # _ndb_struct_conf_na.entry_id 183D _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 10 2_555 0.084 -0.120 0.280 -5.284 -10.523 -1.087 1 A_DC1:DG10_A A 1 ? A 10 ? 19 1 1 A DC 2 1_555 A DG 9 2_555 0.315 -0.184 -0.057 -0.577 -10.021 -1.708 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1 1 A DA 3 1_555 A DT 8 2_555 -0.002 -0.184 0.209 0.883 -7.569 1.143 3 A_DA3:DT8_A A 3 ? A 8 ? 20 1 1 A 8OG 4 1_555 A DC 7 2_555 -0.014 -0.125 0.467 2.461 -6.679 -3.930 4 A_8OG4:DC7_A A 4 ? A 7 ? 19 1 1 A DC 5 1_555 A DG 6 2_555 -0.009 -0.048 -0.094 2.715 -8.767 -1.614 5 A_DC5:DG6_A A 5 ? A 6 ? 19 1 1 A DG 6 1_555 A DC 5 2_555 0.009 -0.048 -0.094 -2.715 -8.767 -1.614 6 A_DG6:DC5_A A 6 ? A 5 ? 19 1 1 A DC 7 1_555 A 8OG 4 2_555 0.014 -0.125 0.467 -2.462 -6.679 -3.930 7 A_DC7:8OG4_A A 7 ? A 4 ? 19 1 1 A DT 8 1_555 A DA 3 2_555 0.002 -0.184 0.209 -0.883 -7.569 1.143 8 A_DT8:DA3_A A 8 ? A 3 ? 20 1 1 A DG 9 1_555 A DC 2 2_555 -0.315 -0.184 -0.057 0.577 -10.021 -1.708 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1 1 A DG 10 1_555 A DC 1 2_555 -0.084 -0.120 0.280 5.284 -10.523 -1.087 10 A_DG10:DC1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 10 2_555 A DC 2 1_555 A DG 9 2_555 -0.451 0.653 3.276 4.624 6.526 29.411 -0.077 1.794 3.236 12.563 -8.903 30.456 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DC 2 1_555 A DG 9 2_555 A DA 3 1_555 A DT 8 2_555 0.170 2.806 3.265 -1.613 -7.518 49.505 3.825 -0.310 2.831 -8.916 1.913 50.062 2 AA_DC2DA3:DT8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DA 3 1_555 A DT 8 2_555 A 8OG 4 1_555 A DC 7 2_555 0.551 0.515 3.383 -3.620 8.430 22.911 -1.504 -2.455 3.241 20.213 8.681 24.657 3 AA_DA38OG4:DC7DT8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A 8OG 4 1_555 A DC 7 2_555 A DC 5 1_555 A DG 6 2_555 -0.233 0.369 3.407 5.129 -1.195 37.040 0.738 1.062 3.333 -1.869 -8.024 37.399 4 AA_8OG4DC5:DG6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DC 5 1_555 A DG 6 2_555 A DG 6 1_555 A DC 5 2_555 0.000 0.293 3.512 0.000 6.976 42.440 -0.347 0.000 3.515 9.559 0.000 42.983 5 AA_DC5DG6:DC5DG6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DG 6 1_555 A DC 5 2_555 A DC 7 1_555 A 8OG 4 2_555 0.233 0.369 3.407 -5.129 -1.195 37.040 0.738 -1.062 3.333 -1.869 8.024 37.399 6 AA_DG6DC7:8OG4DC5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DC 7 1_555 A 8OG 4 2_555 A DT 8 1_555 A DA 3 2_555 -0.551 0.515 3.383 3.620 8.430 22.911 -1.504 2.455 3.241 20.213 -8.681 24.657 7 AA_DC7DT8:DA38OG4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DT 8 1_555 A DA 3 2_555 A DG 9 1_555 A DC 2 2_555 -0.170 2.806 3.265 1.613 -7.518 49.505 3.825 0.310 2.831 -8.915 -1.913 50.062 8 AA_DT8DG9:DC2DA3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DG 9 1_555 A DC 2 2_555 A DG 10 1_555 A DC 1 2_555 0.451 0.653 3.276 -4.624 6.526 29.411 -0.077 -1.794 3.236 12.563 8.903 30.456 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _atom_sites.entry_id 183D _atom_sites.fract_transf_matrix[1][1] 0.030989 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.014961 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.039124 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031992 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? -14.011 1.746 11.466 1.00 20.21 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? -13.947 2.742 12.515 1.00 13.83 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? -12.509 3.285 12.753 1.00 12.63 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? -11.664 2.236 13.243 1.00 12.57 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? -11.797 3.836 11.497 1.00 12.96 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? -11.361 5.165 11.792 1.00 11.84 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? -10.624 2.907 11.238 1.00 12.35 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? -10.389 2.244 12.591 1.00 11.09 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? -9.930 0.839 12.528 1.00 9.22 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? -8.706 0.551 13.113 1.00 6.69 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? -8.014 1.449 13.569 1.00 9.22 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? -8.308 -0.745 13.197 1.00 5.44 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? -9.082 -1.705 12.723 1.00 3.66 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? -8.667 -2.923 12.868 1.00 3.48 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? -10.334 -1.447 12.112 1.00 5.68 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? -10.728 -0.162 12.034 1.00 6.15 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? -11.087 6.171 10.598 1.00 10.38 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? -11.361 7.521 11.120 1.00 13.15 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? -11.770 5.689 9.368 1.00 11.07 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? -9.498 6.037 10.402 1.00 10.01 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? -8.566 6.469 11.421 1.00 8.16 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? -7.136 6.054 11.073 1.00 8.43 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? -7.030 4.620 11.174 1.00 9.25 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? -6.787 6.432 9.617 1.00 9.81 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? -5.410 6.805 9.501 1.00 10.87 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? -6.995 5.137 8.878 1.00 7.56 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? -6.528 4.132 9.898 1.00 8.14 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? -6.828 2.691 9.677 1.00 6.43 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? -5.971 1.781 10.295 1.00 6.85 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? -4.932 2.155 10.859 1.00 9.47 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? -6.283 0.446 10.262 1.00 6.77 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? -7.394 0.011 9.651 1.00 4.92 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? -7.617 -1.279 9.667 1.00 6.22 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? -8.300 0.920 8.995 1.00 4.90 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? -7.964 2.231 9.043 1.00 6.72 ? 2 DC A C6 1 ATOM 36 P P . DA A 1 3 ? -5.039 8.333 9.311 1.00 12.54 ? 3 DA A P 1 ATOM 37 O OP1 . DA A 1 3 ? -5.681 9.187 10.276 1.00 16.11 ? 3 DA A OP1 1 ATOM 38 O OP2 . DA A 1 3 ? -5.176 8.623 7.874 1.00 13.99 ? 3 DA A OP2 1 ATOM 39 O "O5'" . DA A 1 3 ? -3.487 8.285 9.761 1.00 12.56 ? 3 DA A "O5'" 1 ATOM 40 C "C5'" . DA A 1 3 ? -3.018 7.985 11.050 1.00 10.87 ? 3 DA A "C5'" 1 ATOM 41 C "C4'" . DA A 1 3 ? -1.817 7.057 11.017 1.00 9.56 ? 3 DA A "C4'" 1 ATOM 42 O "O4'" . DA A 1 3 ? -2.084 5.743 10.453 1.00 8.88 ? 3 DA A "O4'" 1 ATOM 43 C "C3'" . DA A 1 3 ? -0.742 7.699 10.134 1.00 12.05 ? 3 DA A "C3'" 1 ATOM 44 O "O3'" . DA A 1 3 ? 0.555 7.525 10.752 1.00 13.95 ? 3 DA A "O3'" 1 ATOM 45 C "C2'" . DA A 1 3 ? -0.884 6.884 8.791 1.00 10.00 ? 3 DA A "C2'" 1 ATOM 46 C "C1'" . DA A 1 3 ? -1.408 5.537 9.211 1.00 8.66 ? 3 DA A "C1'" 1 ATOM 47 N N9 . DA A 1 3 ? -2.304 4.919 8.249 1.00 5.98 ? 3 DA A N9 1 ATOM 48 C C8 . DA A 1 3 ? -3.236 5.486 7.425 1.00 5.63 ? 3 DA A C8 1 ATOM 49 N N7 . DA A 1 3 ? -4.102 4.670 6.885 1.00 6.50 ? 3 DA A N7 1 ATOM 50 C C5 . DA A 1 3 ? -3.690 3.458 7.407 1.00 6.79 ? 3 DA A C5 1 ATOM 51 C C6 . DA A 1 3 ? -4.164 2.157 7.213 1.00 6.36 ? 3 DA A C6 1 ATOM 52 N N6 . DA A 1 3 ? -5.214 1.886 6.449 1.00 6.56 ? 3 DA A N6 1 ATOM 53 N N1 . DA A 1 3 ? -3.511 1.179 7.845 1.00 6.29 ? 3 DA A N1 1 ATOM 54 C C2 . DA A 1 3 ? -2.482 1.453 8.606 1.00 4.74 ? 3 DA A C2 1 ATOM 55 N N3 . DA A 1 3 ? -1.946 2.602 8.875 1.00 5.36 ? 3 DA A N3 1 ATOM 56 C C4 . DA A 1 3 ? -2.610 3.592 8.228 1.00 6.60 ? 3 DA A C4 1 HETATM 57 P P . 8OG A 1 4 ? 1.981 8.032 10.161 1.00 11.03 ? 4 8OG A P 1 HETATM 58 O OP1 . 8OG A 1 4 ? 2.781 7.955 11.384 1.00 14.92 ? 4 8OG A OP1 1 HETATM 59 O OP2 . 8OG A 1 4 ? 1.831 9.286 9.392 1.00 11.67 ? 4 8OG A OP2 1 HETATM 60 O "O5'" . 8OG A 1 4 ? 2.400 6.878 9.204 1.00 15.51 ? 4 8OG A "O5'" 1 HETATM 61 C "C5'" . 8OG A 1 4 ? 2.801 5.567 9.635 1.00 18.14 ? 4 8OG A "C5'" 1 HETATM 62 C "C4'" . 8OG A 1 4 ? 2.950 4.592 8.410 1.00 21.27 ? 4 8OG A "C4'" 1 HETATM 63 O "O4'" . 8OG A 1 4 ? 1.722 4.067 7.823 1.00 20.42 ? 4 8OG A "O4'" 1 HETATM 64 C "C3'" . 8OG A 1 4 ? 3.684 5.319 7.250 1.00 21.93 ? 4 8OG A "C3'" 1 HETATM 65 O "O3'" . 8OG A 1 4 ? 4.645 4.490 6.665 1.00 25.63 ? 4 8OG A "O3'" 1 HETATM 66 C "C2'" . 8OG A 1 4 ? 2.714 5.493 6.098 1.00 21.25 ? 4 8OG A "C2'" 1 HETATM 67 C "C1'" . 8OG A 1 4 ? 1.529 4.700 6.531 1.00 18.95 ? 4 8OG A "C1'" 1 HETATM 68 N N9 . 8OG A 1 4 ? 0.320 4.612 5.766 1.00 3.13 ? 4 8OG A N9 1 HETATM 69 C C8 . 8OG A 1 4 ? -0.478 5.661 5.309 1.00 10.88 ? 4 8OG A C8 1 HETATM 70 N N7 . 8OG A 1 4 ? -1.546 5.165 4.670 1.00 12.32 ? 4 8OG A N7 1 HETATM 71 C C5 . 8OG A 1 4 ? -1.381 3.794 4.745 1.00 9.66 ? 4 8OG A C5 1 HETATM 72 C C6 . 8OG A 1 4 ? -2.281 2.741 4.340 1.00 7.16 ? 4 8OG A C6 1 HETATM 73 O O6 . 8OG A 1 4 ? -3.358 2.851 3.783 1.00 10.14 ? 4 8OG A O6 1 HETATM 74 N N1 . 8OG A 1 4 ? -1.869 1.473 4.672 1.00 6.49 ? 4 8OG A N1 1 HETATM 75 C C2 . 8OG A 1 4 ? -0.729 1.224 5.329 1.00 6.85 ? 4 8OG A C2 1 HETATM 76 N N2 . 8OG A 1 4 ? -0.519 -0.032 5.558 1.00 7.72 ? 4 8OG A N2 1 HETATM 77 N N3 . 8OG A 1 4 ? 0.130 2.176 5.731 1.00 7.31 ? 4 8OG A N3 1 HETATM 78 C C4 . 8OG A 1 4 ? -0.248 3.446 5.408 1.00 9.13 ? 4 8OG A C4 1 HETATM 79 O O8 . 8OG A 1 4 ? -0.074 6.833 5.204 1.00 21.70 ? 4 8OG A O8 1 ATOM 80 P P . DC A 1 5 ? 6.150 4.919 6.514 1.00 25.52 ? 5 DC A P 1 ATOM 81 O OP1 . DC A 1 5 ? 6.698 5.420 7.786 1.00 25.43 ? 5 DC A OP1 1 ATOM 82 O OP2 . DC A 1 5 ? 6.255 5.747 5.253 1.00 26.33 ? 5 DC A OP2 1 ATOM 83 O "O5'" . DC A 1 5 ? 6.561 3.378 6.335 1.00 26.05 ? 5 DC A "O5'" 1 ATOM 84 C "C5'" . DC A 1 5 ? 6.219 2.217 7.114 1.00 23.98 ? 5 DC A "C5'" 1 ATOM 85 C "C4'" . DC A 1 5 ? 5.735 1.078 6.176 1.00 22.36 ? 5 DC A "C4'" 1 ATOM 86 O "O4'" . DC A 1 5 ? 4.434 1.343 5.545 1.00 20.31 ? 5 DC A "O4'" 1 ATOM 87 C "C3'" . DC A 1 5 ? 6.676 0.875 4.954 1.00 24.03 ? 5 DC A "C3'" 1 ATOM 88 O "O3'" . DC A 1 5 ? 6.887 -0.542 4.873 1.00 27.73 ? 5 DC A "O3'" 1 ATOM 89 C "C2'" . DC A 1 5 ? 5.856 1.359 3.750 1.00 21.11 ? 5 DC A "C2'" 1 ATOM 90 C "C1'" . DC A 1 5 ? 4.433 1.025 4.146 1.00 17.77 ? 5 DC A "C1'" 1 ATOM 91 N N1 . DC A 1 5 ? 3.379 1.820 3.459 1.00 16.18 ? 5 DC A N1 1 ATOM 92 C C2 . DC A 1 5 ? 2.250 1.135 3.047 1.00 13.79 ? 5 DC A C2 1 ATOM 93 O O2 . DC A 1 5 ? 2.110 -0.079 3.162 1.00 15.86 ? 5 DC A O2 1 ATOM 94 N N3 . DC A 1 5 ? 1.262 1.820 2.484 1.00 11.73 ? 5 DC A N3 1 ATOM 95 C C4 . DC A 1 5 ? 1.347 3.135 2.321 1.00 11.99 ? 5 DC A C4 1 ATOM 96 N N4 . DC A 1 5 ? 0.304 3.749 1.787 1.00 10.88 ? 5 DC A N4 1 ATOM 97 C C5 . DC A 1 5 ? 2.500 3.876 2.734 1.00 12.61 ? 5 DC A C5 1 ATOM 98 C C6 . DC A 1 5 ? 3.486 3.173 3.295 1.00 13.46 ? 5 DC A C6 1 ATOM 99 P P . DG A 1 6 ? 7.822 -1.372 3.866 1.00 26.13 ? 6 DG A P 1 ATOM 100 O OP1 . DG A 1 6 ? 8.633 -2.250 4.739 1.00 30.76 ? 6 DG A OP1 1 ATOM 101 O OP2 . DG A 1 6 ? 8.483 -0.491 2.877 1.00 29.45 ? 6 DG A OP2 1 ATOM 102 O "O5'" . DG A 1 6 ? 6.722 -2.266 3.112 1.00 27.57 ? 6 DG A "O5'" 1 ATOM 103 C "C5'" . DG A 1 6 ? 5.791 -3.193 3.726 1.00 25.99 ? 6 DG A "C5'" 1 ATOM 104 C "C4'" . DG A 1 6 ? 4.886 -3.908 2.672 1.00 26.14 ? 6 DG A "C4'" 1 ATOM 105 O "O4'" . DG A 1 6 ? 3.960 -3.025 2.001 1.00 25.69 ? 6 DG A "O4'" 1 ATOM 106 C "C3'" . DG A 1 6 ? 5.810 -4.446 1.559 1.00 26.31 ? 6 DG A "C3'" 1 ATOM 107 O "O3'" . DG A 1 6 ? 5.585 -5.833 1.195 1.00 27.63 ? 6 DG A "O3'" 1 ATOM 108 C "C2'" . DG A 1 6 ? 5.667 -3.460 0.435 1.00 25.33 ? 6 DG A "C2'" 1 ATOM 109 C "C1'" . DG A 1 6 ? 4.297 -2.889 0.604 1.00 22.90 ? 6 DG A "C1'" 1 ATOM 110 N N9 . DG A 1 6 ? 4.273 -1.479 0.098 1.00 20.64 ? 6 DG A N9 1 ATOM 111 C C8 . DG A 1 6 ? 5.071 -0.383 0.436 1.00 19.16 ? 6 DG A C8 1 ATOM 112 N N7 . DG A 1 6 ? 4.512 0.785 0.154 1.00 18.45 ? 6 DG A N7 1 ATOM 113 C C5 . DG A 1 6 ? 3.267 0.412 -0.406 1.00 16.26 ? 6 DG A C5 1 ATOM 114 C C6 . DG A 1 6 ? 2.198 1.190 -0.889 1.00 14.17 ? 6 DG A C6 1 ATOM 115 O O6 . DG A 1 6 ? 2.124 2.399 -0.953 1.00 14.87 ? 6 DG A O6 1 ATOM 116 N N1 . DG A 1 6 ? 1.130 0.439 -1.339 1.00 13.47 ? 6 DG A N1 1 ATOM 117 C C2 . DG A 1 6 ? 1.081 -0.920 -1.334 1.00 13.26 ? 6 DG A C2 1 ATOM 118 N N2 . DG A 1 6 ? -0.003 -1.490 -1.790 1.00 14.61 ? 6 DG A N2 1 ATOM 119 N N3 . DG A 1 6 ? 2.067 -1.681 -0.892 1.00 15.12 ? 6 DG A N3 1 ATOM 120 C C4 . DG A 1 6 ? 3.122 -0.944 -0.441 1.00 17.40 ? 6 DG A C4 1 ATOM 121 P P . DC A 1 7 ? 6.385 -6.648 0.048 1.00 25.74 ? 7 DC A P 1 ATOM 122 O OP1 . DC A 1 7 ? 6.367 -8.066 0.440 1.00 28.28 ? 7 DC A OP1 1 ATOM 123 O OP2 . DC A 1 7 ? 7.612 -5.933 -0.375 1.00 24.63 ? 7 DC A OP2 1 ATOM 124 O "O5'" . DC A 1 7 ? 5.333 -6.507 -1.183 1.00 24.87 ? 7 DC A "O5'" 1 ATOM 125 C "C5'" . DC A 1 7 ? 3.985 -6.981 -1.195 1.00 18.97 ? 7 DC A "C5'" 1 ATOM 126 C "C4'" . DC A 1 7 ? 3.320 -6.327 -2.330 1.00 16.57 ? 7 DC A "C4'" 1 ATOM 127 O "O4'" . DC A 1 7 ? 3.470 -4.915 -2.278 1.00 15.77 ? 7 DC A "O4'" 1 ATOM 128 C "C3'" . DC A 1 7 ? 4.083 -6.695 -3.603 1.00 15.93 ? 7 DC A "C3'" 1 ATOM 129 O "O3'" . DC A 1 7 ? 3.277 -7.709 -4.139 1.00 18.26 ? 7 DC A "O3'" 1 ATOM 130 C "C2'" . DC A 1 7 ? 4.092 -5.448 -4.486 1.00 14.49 ? 7 DC A "C2'" 1 ATOM 131 C "C1'" . DC A 1 7 ? 3.403 -4.409 -3.634 1.00 13.18 ? 7 DC A "C1'" 1 ATOM 132 N N1 . DC A 1 7 ? 4.008 -3.070 -3.768 1.00 10.80 ? 7 DC A N1 1 ATOM 133 C C2 . DC A 1 7 ? 3.194 -2.048 -4.223 1.00 9.71 ? 7 DC A C2 1 ATOM 134 O O2 . DC A 1 7 ? 2.078 -2.241 -4.734 1.00 11.15 ? 7 DC A O2 1 ATOM 135 N N3 . DC A 1 7 ? 3.664 -0.789 -4.089 1.00 8.09 ? 7 DC A N3 1 ATOM 136 C C4 . DC A 1 7 ? 4.831 -0.529 -3.550 1.00 5.08 ? 7 DC A C4 1 ATOM 137 N N4 . DC A 1 7 ? 5.195 0.715 -3.430 1.00 7.47 ? 7 DC A N4 1 ATOM 138 C C5 . DC A 1 7 ? 5.670 -1.566 -3.085 1.00 10.08 ? 7 DC A C5 1 ATOM 139 C C6 . DC A 1 7 ? 5.208 -2.825 -3.219 1.00 8.61 ? 7 DC A C6 1 ATOM 140 P P . DT A 1 8 ? 3.616 -8.608 -5.382 1.00 15.92 ? 8 DT A P 1 ATOM 141 O OP1 . DT A 1 8 ? 2.730 -9.742 -5.229 1.00 20.36 ? 8 DT A OP1 1 ATOM 142 O OP2 . DT A 1 8 ? 5.067 -8.856 -5.507 1.00 19.31 ? 8 DT A OP2 1 ATOM 143 O "O5'" . DT A 1 8 ? 3.137 -7.694 -6.595 1.00 16.78 ? 8 DT A "O5'" 1 ATOM 144 C "C5'" . DT A 1 8 ? 1.753 -7.308 -6.853 1.00 12.55 ? 8 DT A "C5'" 1 ATOM 145 C "C4'" . DT A 1 8 ? 1.596 -6.371 -8.042 1.00 10.47 ? 8 DT A "C4'" 1 ATOM 146 O "O4'" . DT A 1 8 ? 2.073 -5.066 -7.736 1.00 9.65 ? 8 DT A "O4'" 1 ATOM 147 C "C3'" . DT A 1 8 ? 2.388 -6.863 -9.314 1.00 10.98 ? 8 DT A "C3'" 1 ATOM 148 O "O3'" . DT A 1 8 ? 1.657 -6.665 -10.521 1.00 10.31 ? 8 DT A "O3'" 1 ATOM 149 C "C2'" . DT A 1 8 ? 3.593 -5.979 -9.295 1.00 8.74 ? 8 DT A "C2'" 1 ATOM 150 C "C1'" . DT A 1 8 ? 2.982 -4.704 -8.751 1.00 8.32 ? 8 DT A "C1'" 1 ATOM 151 N N1 . DT A 1 8 ? 3.902 -3.723 -8.232 1.00 6.74 ? 8 DT A N1 1 ATOM 152 C C2 . DT A 1 8 ? 3.520 -2.369 -8.326 1.00 7.19 ? 8 DT A C2 1 ATOM 153 O O2 . DT A 1 8 ? 2.511 -1.924 -8.884 1.00 7.46 ? 8 DT A O2 1 ATOM 154 N N3 . DT A 1 8 ? 4.383 -1.463 -7.736 1.00 7.86 ? 8 DT A N3 1 ATOM 155 C C4 . DT A 1 8 ? 5.534 -1.785 -7.087 1.00 6.35 ? 8 DT A C4 1 ATOM 156 O O4 . DT A 1 8 ? 6.181 -0.854 -6.618 1.00 7.17 ? 8 DT A O4 1 ATOM 157 C C5 . DT A 1 8 ? 5.853 -3.210 -7.032 1.00 6.41 ? 8 DT A C5 1 ATOM 158 C C7 . DT A 1 8 ? 7.116 -3.677 -6.329 1.00 6.62 ? 8 DT A C7 1 ATOM 159 C C6 . DT A 1 8 ? 5.054 -4.122 -7.585 1.00 6.35 ? 8 DT A C6 1 ATOM 160 H H3 . DT A 1 8 ? 4.123 -0.488 -7.749 1.00 0.00 ? 8 DT A H3 1 ATOM 161 P P . DG A 1 9 ? 0.777 -7.833 -11.226 1.00 10.47 ? 9 DG A P 1 ATOM 162 O OP1 . DG A 1 9 ? -0.059 -8.444 -10.164 1.00 10.20 ? 9 DG A OP1 1 ATOM 163 O OP2 . DG A 1 9 ? 1.591 -8.671 -12.074 1.00 12.31 ? 9 DG A OP2 1 ATOM 164 O "O5'" . DG A 1 9 ? -0.141 -6.977 -12.179 1.00 7.67 ? 9 DG A "O5'" 1 ATOM 165 C "C5'" . DG A 1 9 ? -1.190 -6.151 -11.693 1.00 9.26 ? 9 DG A "C5'" 1 ATOM 166 C "C4'" . DG A 1 9 ? -1.403 -4.861 -12.505 1.00 8.49 ? 9 DG A "C4'" 1 ATOM 167 O "O4'" . DG A 1 9 ? -0.359 -3.907 -12.336 1.00 9.60 ? 9 DG A "O4'" 1 ATOM 168 C "C3'" . DG A 1 9 ? -1.458 -5.161 -13.954 1.00 10.40 ? 9 DG A "C3'" 1 ATOM 169 O "O3'" . DG A 1 9 ? -2.430 -4.322 -14.607 1.00 12.51 ? 9 DG A "O3'" 1 ATOM 170 C "C2'" . DG A 1 9 ? -0.035 -4.830 -14.469 1.00 11.09 ? 9 DG A "C2'" 1 ATOM 171 C "C1'" . DG A 1 9 ? 0.455 -3.777 -13.518 1.00 9.27 ? 9 DG A "C1'" 1 ATOM 172 N N9 . DG A 1 9 ? 1.866 -3.903 -13.137 1.00 7.71 ? 9 DG A N9 1 ATOM 173 C C8 . DG A 1 9 ? 2.700 -4.997 -13.090 1.00 8.44 ? 9 DG A C8 1 ATOM 174 N N7 . DG A 1 9 ? 3.825 -4.767 -12.508 1.00 5.90 ? 9 DG A N7 1 ATOM 175 C C5 . DG A 1 9 ? 3.741 -3.446 -12.139 1.00 6.92 ? 9 DG A C5 1 ATOM 176 C C6 . DG A 1 9 ? 4.739 -2.611 -11.541 1.00 6.36 ? 9 DG A C6 1 ATOM 177 O O6 . DG A 1 9 ? 5.848 -2.903 -11.125 1.00 7.09 ? 9 DG A O6 1 ATOM 178 N N1 . DG A 1 9 ? 4.310 -1.302 -11.466 1.00 7.74 ? 9 DG A N1 1 ATOM 179 C C2 . DG A 1 9 ? 3.066 -0.834 -11.900 1.00 9.33 ? 9 DG A C2 1 ATOM 180 N N2 . DG A 1 9 ? 2.804 0.464 -11.740 1.00 9.07 ? 9 DG A N2 1 ATOM 181 N N3 . DG A 1 9 ? 2.127 -1.610 -12.447 1.00 6.06 ? 9 DG A N3 1 ATOM 182 C C4 . DG A 1 9 ? 2.548 -2.904 -12.528 1.00 6.76 ? 9 DG A C4 1 ATOM 183 P P . DG A 1 10 ? -2.838 -4.422 -16.136 1.00 13.02 ? 10 DG A P 1 ATOM 184 O OP1 . DG A 1 10 ? -4.188 -3.847 -16.163 1.00 15.10 ? 10 DG A OP1 1 ATOM 185 O OP2 . DG A 1 10 ? -2.539 -5.789 -16.626 1.00 13.62 ? 10 DG A OP2 1 ATOM 186 O "O5'" . DG A 1 10 ? -1.843 -3.351 -16.806 1.00 12.85 ? 10 DG A "O5'" 1 ATOM 187 C "C5'" . DG A 1 10 ? -2.011 -1.957 -16.569 1.00 11.69 ? 10 DG A "C5'" 1 ATOM 188 C "C4'" . DG A 1 10 ? -0.778 -1.135 -16.947 1.00 13.20 ? 10 DG A "C4'" 1 ATOM 189 O "O4'" . DG A 1 10 ? 0.351 -1.584 -16.224 1.00 12.15 ? 10 DG A "O4'" 1 ATOM 190 C "C3'" . DG A 1 10 ? -0.500 -1.268 -18.438 1.00 12.72 ? 10 DG A "C3'" 1 ATOM 191 O "O3'" . DG A 1 10 ? -0.904 -0.050 -19.132 1.00 14.33 ? 10 DG A "O3'" 1 ATOM 192 C "C2'" . DG A 1 10 ? 0.979 -1.575 -18.422 1.00 10.86 ? 10 DG A "C2'" 1 ATOM 193 C "C1'" . DG A 1 10 ? 1.448 -1.305 -17.019 1.00 9.11 ? 10 DG A "C1'" 1 ATOM 194 N N9 . DG A 1 10 ? 2.494 -2.184 -16.505 1.00 7.62 ? 10 DG A N9 1 ATOM 195 C C8 . DG A 1 10 ? 2.656 -3.536 -16.630 1.00 8.23 ? 10 DG A C8 1 ATOM 196 N N7 . DG A 1 10 ? 3.714 -4.007 -16.111 1.00 6.28 ? 10 DG A N7 1 ATOM 197 C C5 . DG A 1 10 ? 4.340 -2.860 -15.580 1.00 6.59 ? 10 DG A C5 1 ATOM 198 C C6 . DG A 1 10 ? 5.610 -2.670 -14.907 1.00 4.86 ? 10 DG A C6 1 ATOM 199 O O6 . DG A 1 10 ? 6.457 -3.487 -14.562 1.00 5.57 ? 10 DG A O6 1 ATOM 200 N N1 . DG A 1 10 ? 5.846 -1.352 -14.622 1.00 5.64 ? 10 DG A N1 1 ATOM 201 C C2 . DG A 1 10 ? 4.999 -0.307 -14.923 1.00 4.58 ? 10 DG A C2 1 ATOM 202 N N2 . DG A 1 10 ? 5.390 0.890 -14.556 1.00 5.89 ? 10 DG A N2 1 ATOM 203 N N3 . DG A 1 10 ? 3.833 -0.442 -15.538 1.00 6.37 ? 10 DG A N3 1 ATOM 204 C C4 . DG A 1 10 ? 3.568 -1.743 -15.834 1.00 5.70 ? 10 DG A C4 1 HETATM 205 O O . HOH B 2 . ? -10.447 7.777 14.115 1.00 21.65 ? 11 HOH A O 1 HETATM 206 O O . HOH B 2 . ? 1.758 1.555 -14.933 1.00 20.17 ? 12 HOH A O 1 HETATM 207 O O . HOH B 2 . ? 0.124 3.828 -15.729 1.00 38.60 ? 13 HOH A O 1 HETATM 208 O O . HOH B 2 . ? -10.684 -4.829 11.623 1.00 13.33 ? 14 HOH A O 1 HETATM 209 O O . HOH B 2 . ? -9.469 -4.986 9.029 1.00 17.75 ? 15 HOH A O 1 HETATM 210 O O . HOH B 2 . ? -10.204 -1.926 8.115 1.00 16.87 ? 16 HOH A O 1 HETATM 211 O O . HOH B 2 . ? 9.223 -0.445 -5.906 1.00 31.81 ? 17 HOH A O 1 HETATM 212 O O . HOH B 2 . ? -7.268 3.339 4.220 1.00 35.57 ? 18 HOH A O 1 HETATM 213 O O . HOH B 2 . ? -5.683 6.664 5.221 1.00 41.33 ? 19 HOH A O 1 HETATM 214 O O . HOH B 2 . ? 7.147 -5.363 -10.440 1.00 14.61 ? 20 HOH A O 1 HETATM 215 O O . HOH B 2 . ? 6.495 -7.245 -7.454 1.00 16.93 ? 21 HOH A O 1 HETATM 216 O O . HOH B 2 . ? 11.069 -8.871 -13.187 1.00 27.51 ? 22 HOH A O 1 HETATM 217 O O . HOH B 2 . ? -9.836 -6.868 14.770 1.00 56.46 ? 23 HOH A O 1 HETATM 218 O O . HOH B 2 . ? 7.944 -3.501 7.405 1.00 43.92 ? 24 HOH A O 1 HETATM 219 O O . HOH B 2 . ? 3.497 4.666 -0.736 1.00 29.30 ? 25 HOH A O 1 HETATM 220 O O . HOH B 2 . ? 8.331 -3.855 -2.541 1.00 46.33 ? 26 HOH A O 1 HETATM 221 O O . HOH B 2 . ? 5.770 7.104 -1.096 1.00 32.06 ? 27 HOH A O 1 HETATM 222 O O . HOH B 2 . ? 4.320 7.119 2.105 1.00 45.36 ? 28 HOH A O 1 HETATM 223 O O . HOH B 2 . ? -8.719 13.426 11.471 1.00 54.63 ? 29 HOH A O 1 HETATM 224 O O . HOH B 2 . ? 3.770 -13.588 -9.914 1.00 35.31 ? 30 HOH A O 1 HETATM 225 O O . HOH B 2 . ? -7.988 10.691 11.169 1.00 29.74 ? 31 HOH A O 1 HETATM 226 O O . HOH B 2 . ? 5.136 -0.341 13.958 1.00 40.42 ? 32 HOH A O 1 HETATM 227 O O . HOH B 2 . ? -5.464 -6.506 -17.733 1.00 15.52 ? 33 HOH A O 1 HETATM 228 O O . HOH B 2 . ? -8.820 4.855 15.119 1.00 28.33 ? 34 HOH A O 1 HETATM 229 O O . HOH B 2 . ? -12.411 0.577 -13.234 1.00 64.39 ? 35 HOH A O 1 HETATM 230 O O . HOH B 2 . ? -5.633 -2.204 -17.827 1.00 34.04 ? 36 HOH A O 1 HETATM 231 O O . HOH B 2 . ? 0.372 -10.991 -8.494 1.00 30.38 ? 37 HOH A O 1 HETATM 232 O O . HOH B 2 . ? 3.993 -10.490 -9.702 1.00 34.11 ? 38 HOH A O 1 HETATM 233 O O . HOH B 2 . ? 6.253 -6.735 -12.608 1.00 36.53 ? 39 HOH A O 1 HETATM 234 O O . HOH B 2 . ? 2.167 6.043 13.876 1.00 23.65 ? 40 HOH A O 1 HETATM 235 O O . HOH B 2 . ? -14.082 5.655 8.049 1.00 17.81 ? 41 HOH A O 1 HETATM 236 O O . HOH B 2 . ? -13.825 7.499 6.012 1.00 32.32 ? 42 HOH A O 1 HETATM 237 O O . HOH B 2 . ? -15.939 7.915 4.220 1.00 37.71 ? 43 HOH A O 1 HETATM 238 O O . HOH B 2 . ? 0.656 6.714 1.287 1.00 41.59 ? 44 HOH A O 1 HETATM 239 O O . HOH B 2 . ? 6.436 3.236 0.247 1.00 48.82 ? 45 HOH A O 1 HETATM 240 O O . HOH B 2 . ? 2.230 -1.985 6.368 1.00 33.48 ? 46 HOH A O 1 HETATM 241 O O . HOH B 2 . ? 6.056 -8.175 -10.067 1.00 21.04 ? 47 HOH A O 1 HETATM 242 O O . HOH B 2 . ? -15.973 10.003 9.776 1.00 18.60 ? 48 HOH A O 1 HETATM 243 O O . HOH B 2 . ? -12.883 9.394 9.277 1.00 31.19 ? 49 HOH A O 1 HETATM 244 O O . HOH B 2 . ? 3.924 1.322 9.621 1.00 28.86 ? 50 HOH A O 1 HETATM 245 O O . HOH B 2 . ? -11.044 -3.220 5.631 1.00 62.99 ? 51 HOH A O 1 HETATM 246 O O . HOH B 2 . ? -5.546 -10.411 13.210 1.00 68.93 ? 52 HOH A O 1 #