0.016069
0.000000
0.012013
0.000000
0.041118
0.000000
0.000000
0.000000
0.030579
0.00000
0.00000
0.00000
Goodsell, D.S.
Grzeskowiak, K.
Dickerson, R.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
126.78
90.00
62.230
24.320
40.830
Ca 2
40.078
CALCIUM ION
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
CA
N
2
N
O
N
3
N
P
N
4
N
O
N
5
N
O
N
6
N
O
N
7
N
C
N
8
R
C
N
9
N
O
N
10
S
C
N
11
N
O
N
12
N
C
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
O
N
39
N
P
N
40
N
O
N
41
N
O
N
42
N
O
N
43
N
C
N
44
R
C
N
45
N
O
N
46
S
C
N
47
N
O
N
48
N
C
N
49
R
C
N
50
N
N
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
C
N
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
P
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
C
N
78
R
C
N
79
N
O
N
80
S
C
N
81
N
O
N
82
N
C
N
83
R
C
Y
84
N
N
Y
85
N
C
Y
86
N
N
Y
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
C
N
92
N
N
N
93
N
N
Y
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
O
N
110
N
P
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
C
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
N
C
N
120
R
C
N
121
N
N
N
122
N
C
N
123
N
O
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
H
N
147
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
34
1022
1029
10.1021/bi00003a037
7827018
Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction.
1995
10.2210/pdb196d/pdb
pdb_0000196d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
93.00
1
IMAGE PLATE
RIGAKU RAXIS II
x-ray
1
1.0
3045.004
DNA (5'-D(*CP*TP*CP*TP*CP*GP*AP*GP*AP*G)-3')
2
syn
polymer
40.078
CALCIUM ION
6
syn
non-polymer
18.015
water
114
nat
water
no
no
(DC)(DT)(DC)(DT)(DC)(DG)(DA)(DG)(DA)(DG)
CTCTCGAGAG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
2.03
39.46
VAPOR DIFFUSION, SITTING DROP
VAPOR DIFFUSION, SITTING DROP, temperature 278.00K
278.00
WATER
1
MPD
1
CA ACETATE
1
WATER
2
MPD
2
-8.116
1
19
A
1
B
20
-1.640
A_DC1:DG20_B
1
-13.625
0.212
0.690
-0.098
8.902
1
20
A
2
B
19
-2.456
A_DT2:DA19_B
2
-16.409
-0.246
-0.059
-0.140
-2.039
1
19
A
3
B
18
-5.198
A_DC3:DG18_B
3
-10.624
0.222
0.228
-0.155
2.967
1
20
A
4
B
17
1.294
A_DT4:DA17_B
4
-16.282
-0.217
-0.257
-0.127
2.198
1
19
A
5
B
16
-3.365
A_DC5:DG16_B
5
-4.046
0.067
0.119
0.013
-2.648
1
19
A
6
B
15
-5.240
A_DG6:DC15_B
6
-17.073
-0.121
-0.011
-0.122
-3.538
1
20
A
7
B
14
-0.550
A_DA7:DT14_B
7
-6.180
0.234
-0.202
-0.157
12.555
1
19
A
8
B
13
-1.872
A_DG8:DC13_B
8
-14.233
-0.331
0.268
-0.089
4.549
1
20
A
9
B
12
-2.028
A_DA9:DT12_B
9
-10.027
0.371
0.234
-0.086
5.803
1
19
A
10
B
11
-1.394
A_DG10:DC11_B
10
-16.488
-0.191
0.298
-0.100
2.793
32.669
A
A
1
2
4.469
B
B
20
19
2.890
2.507
-0.452
-0.339
AA_DC1DT2:DA19DG20_BB
1
3.541
-6.313
32.388
-0.981
1.338
3.504
39.973
A
A
2
3
6.536
B
B
19
18
3.540
4.459
-0.431
-0.270
AA_DT2DC3:DG18DA19_BB
2
-1.529
2.242
39.706
-0.948
0.441
3.132
28.077
A
A
3
4
7.345
B
B
18
17
3.154
3.550
-0.176
0.229
AA_DC3DT4:DA17DG18_BB
3
2.425
-5.018
27.753
-0.336
0.915
3.478
40.309
A
A
4
5
2.716
B
B
17
16
3.414
1.871
0.990
1.467
AA_DT4DC5:DG16DA17_BB
4
0.106
-0.154
40.267
1.906
-1.424
3.573
33.862
A
A
5
6
1.222
B
B
16
15
3.466
0.711
-1.172
0.936
AA_DC5DG6:DC15DG16_BB
5
-3.024
5.198
33.723
1.483
1.488
3.289
42.296
A
A
6
7
5.267
B
B
15
14
3.260
3.795
0.206
0.442
AA_DG6DA7:DT14DC15_BB
6
0.942
-1.307
42.123
0.224
-0.189
2.931
28.770
A
A
7
8
10.800
B
B
14
13
2.993
5.322
0.179
0.197
AA_DA7DG8:DC13DT14_BB
7
-3.753
7.616
28.038
-0.699
-1.131
3.489
38.030
A
A
8
9
-2.659
B
B
13
12
3.487
-1.732
-0.159
-0.336
AA_DG8DA9:DT12DC13_BB
8
1.601
-2.458
37.960
-0.281
0.461
3.218
34.156
A
A
9
10
6.960
B
B
12
11
3.291
4.076
0.321
-0.188
AA_DA9DG10:DC11DT12_BB
9
-2.373
4.052
33.839
-0.965
-0.921
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1995-02-27
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
NDB
1994-11-07
REL
REL
CA
CALCIUM ION
HOH
water
OC7
21
2
CA
CA
21
A
OC7
22
2
CA
CA
22
A
OC7
24
2
CA
CA
24
A
OC7
23
2
CA
CA
23
B
OC7
25
2
CA
CA
25
B
OC7
26
2
CA
CA
26
B
HOH
28
3
HOH
HOH
28
A
HOH
30
3
HOH
HOH
30
A
HOH
31
3
HOH
HOH
31
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
44
3
HOH
HOH
44
A
HOH
46
3
HOH
HOH
46
A
HOH
47
3
HOH
HOH
47
A
HOH
48
3
HOH
HOH
48
A
HOH
49
3
HOH
HOH
49
A
HOH
51
3
HOH
HOH
51
A
HOH
52
3
HOH
HOH
52
A
HOH
53
3
HOH
HOH
53
A
HOH
54
3
HOH
HOH
54
A
HOH
59
3
HOH
HOH
59
A
HOH
64
3
HOH
HOH
64
A
HOH
66
3
HOH
HOH
66
A
HOH
70
3
HOH
HOH
70
A
HOH
71
3
HOH
HOH
71
A
HOH
73
3
HOH
HOH
73
A
HOH
75
3
HOH
HOH
75
A
HOH
76
3
HOH
HOH
76
A
HOH
78
3
HOH
HOH
78
A
HOH
79
3
HOH
HOH
79
A
HOH
81
3
HOH
HOH
81
A
HOH
82
3
HOH
HOH
82
A
HOH
85
3
HOH
HOH
85
A
HOH
87
3
HOH
HOH
87
A
HOH
89
3
HOH
HOH
89
A
HOH
93
3
HOH
HOH
93
A
HOH
96
3
HOH
HOH
96
A
HOH
98
3
HOH
HOH
98
A
HOH
101
3
HOH
HOH
101
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
105
3
HOH
HOH
105
A
HOH
108
3
HOH
HOH
108
A
OC7
21
3
HOH
HOH
111
A
OC7
21
3
HOH
HOH
112
A
OC7
21
3
HOH
HOH
113
A
OC7
22
3
HOH
HOH
116
A
OC7
22
3
HOH
HOH
117
A
OC7
22
3
HOH
HOH
118
A
OC7
22
3
HOH
HOH
119
A
OC7
22
3
HOH
HOH
120
A
OC7
24
3
HOH
HOH
124
A
OC7
24
3
HOH
HOH
126
A
OC7
24
3
HOH
HOH
127
A
OC7
25
3
HOH
HOH
131
A
OC7
25
3
HOH
HOH
134
A
HOH
27
3
HOH
HOH
27
B
HOH
29
3
HOH
HOH
29
B
HOH
32
3
HOH
HOH
32
B
HOH
33
3
HOH
HOH
33
B
HOH
34
3
HOH
HOH
34
B
HOH
35
3
HOH
HOH
35
B
HOH
38
3
HOH
HOH
38
B
HOH
39
3
HOH
HOH
39
B
HOH
40
3
HOH
HOH
40
B
HOH
41
3
HOH
HOH
41
B
HOH
42
3
HOH
HOH
42
B
HOH
43
3
HOH
HOH
43
B
HOH
45
3
HOH
HOH
45
B
HOH
50
3
HOH
HOH
50
B
HOH
55
3
HOH
HOH
55
B
HOH
56
3
HOH
HOH
56
B
HOH
57
3
HOH
HOH
57
B
HOH
58
3
HOH
HOH
58
B
HOH
60
3
HOH
HOH
60
B
HOH
61
3
HOH
HOH
61
B
HOH
62
3
HOH
HOH
62
B
HOH
63
3
HOH
HOH
63
B
HOH
65
3
HOH
HOH
65
B
HOH
67
3
HOH
HOH
67
B
HOH
68
3
HOH
HOH
68
B
HOH
69
3
HOH
HOH
69
B
HOH
72
3
HOH
HOH
72
B
HOH
74
3
HOH
HOH
74
B
HOH
77
3
HOH
HOH
77
B
HOH
80
3
HOH
HOH
80
B
HOH
83
3
HOH
HOH
83
B
HOH
84
3
HOH
HOH
84
B
HOH
86
3
HOH
HOH
86
B
HOH
88
3
HOH
HOH
88
B
HOH
90
3
HOH
HOH
90
B
HOH
91
3
HOH
HOH
91
B
HOH
92
3
HOH
HOH
92
B
HOH
94
3
HOH
HOH
94
B
HOH
95
3
HOH
HOH
95
B
HOH
97
3
HOH
HOH
97
B
HOH
99
3
HOH
HOH
99
B
HOH
100
3
HOH
HOH
100
B
HOH
102
3
HOH
HOH
102
B
HOH
106
3
HOH
HOH
106
B
HOH
107
3
HOH
HOH
107
B
OC7
21
3
HOH
HOH
109
B
OC7
21
3
HOH
HOH
110
B
OC7
21
3
HOH
HOH
114
B
OC7
21
3
HOH
HOH
115
B
OC7
23
3
HOH
HOH
121
B
OC7
23
3
HOH
HOH
122
B
OC7
23
3
HOH
HOH
123
B
OC7
24
3
HOH
HOH
125
B
OC7
24
3
HOH
HOH
128
B
OC7
25
3
HOH
HOH
129
B
OC7
25
3
HOH
HOH
130
B
OC7
25
3
HOH
HOH
132
B
OC7
25
3
HOH
HOH
133
B
OC7
26
3
HOH
HOH
135
B
OC7
26
3
HOH
HOH
136
B
OC7
26
3
HOH
HOH
137
B
OC7
26
3
HOH
HOH
138
B
OC7
26
3
HOH
HOH
139
B
OC7
26
3
HOH
HOH
140
B
C
1
n
1
DC
1
A
T
2
n
2
DT
2
A
C
3
n
3
DC
3
A
T
4
n
4
DT
4
A
C
5
n
5
DC
5
A
G
6
n
6
DG
6
A
A
7
n
7
DA
7
A
G
8
n
8
DG
8
A
A
9
n
9
DA
9
A
G
10
n
10
DG
10
A
C
11
n
1
DC
11
B
T
12
n
2
DT
12
B
C
13
n
3
DC
13
B
T
14
n
4
DT
14
B
C
15
n
5
DC
15
B
G
16
n
6
DG
16
B
A
17
n
7
DA
17
B
G
18
n
8
DG
18
B
A
19
n
9
DA
19
B
G
20
n
10
DG
20
B
author_defined_assembly
2
dimeric
A
DC
5
A
OP2
DC
5
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
116
I
O
HOH
1_555
84.4
A
DC
5
A
OP2
DC
5
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
117
I
O
HOH
1_555
97.1
A
HOH
116
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
117
I
O
HOH
1_555
70.2
A
DC
5
A
OP2
DC
5
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
118
I
O
HOH
1_555
90.1
A
HOH
116
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
118
I
O
HOH
1_555
72.2
A
HOH
117
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
118
I
O
HOH
1_555
140.8
A
DC
5
A
OP2
DC
5
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
119
I
O
HOH
1_555
88.7
A
HOH
116
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
119
I
O
HOH
1_555
144.5
A
HOH
117
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
119
I
O
HOH
1_555
76.3
A
HOH
118
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
119
I
O
HOH
1_555
142.7
A
DC
5
A
OP2
DC
5
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
120
I
O
HOH
1_555
77.2
A
HOH
116
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
120
I
O
HOH
1_555
138.1
A
HOH
117
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
120
I
O
HOH
1_555
148.7
A
HOH
118
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
120
I
O
HOH
1_555
70.5
A
HOH
119
I
O
HOH
1_555
A
CA
22
D
CA
CA
1_555
A
HOH
120
I
O
HOH
1_555
72.8
A
HOH
111
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
A
HOH
112
I
O
HOH
1_555
75.3
A
HOH
111
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
A
HOH
113
I
O
HOH
1_555
90.6
A
HOH
112
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
A
HOH
113
I
O
HOH
1_555
83.3
A
HOH
111
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
109
J
O
HOH
1_555
74.1
A
HOH
112
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
109
J
O
HOH
1_555
122.7
A
HOH
113
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
109
J
O
HOH
1_555
143.3
A
HOH
111
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
110
J
O
HOH
1_555
136.5
A
HOH
112
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
110
J
O
HOH
1_555
147.8
A
HOH
113
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
110
J
O
HOH
1_555
90.4
B
HOH
109
J
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
110
J
O
HOH
1_555
79.6
A
HOH
111
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
114
J
O
HOH
1_555
148.5
A
HOH
112
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
114
J
O
HOH
1_555
74.6
A
HOH
113
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
114
J
O
HOH
1_555
77.0
B
HOH
109
J
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
114
J
O
HOH
1_555
131.4
B
HOH
110
J
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
114
J
O
HOH
1_555
73.2
A
HOH
111
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
105.7
A
HOH
112
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
75.2
A
HOH
113
I
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
148.4
B
HOH
109
J
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
68.3
B
HOH
110
J
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
95.5
B
HOH
114
J
O
HOH
1_555
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
75.1
A
HOH
124
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
A
HOH
126
I
O
HOH
1_555
71.2
A
HOH
124
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
A
HOH
127
I
O
HOH
1_555
85.0
A
HOH
126
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
A
HOH
127
I
O
HOH
1_555
150.6
A
HOH
124
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
125
J
O
HOH
1_555
97.5
A
HOH
126
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
125
J
O
HOH
1_555
84.1
A
HOH
127
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
125
J
O
HOH
1_555
82.1
A
HOH
124
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
128
J
O
HOH
1_555
152.5
A
HOH
126
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
128
J
O
HOH
1_555
128.0
A
HOH
127
I
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
128
J
O
HOH
1_555
69.9
B
HOH
125
J
O
HOH
1_555
A
CA
24
E
CA
CA
1_555
B
HOH
128
J
O
HOH
1_555
68.9
A
HOH
131
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
A
HOH
134
I
O
HOH
1_555
73.3
A
HOH
131
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
129
J
O
HOH
1_555
136.5
A
HOH
134
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
129
J
O
HOH
1_555
98.5
A
HOH
131
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
130
J
O
HOH
1_555
141.7
A
HOH
134
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
130
J
O
HOH
1_555
73.6
B
HOH
129
J
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
130
J
O
HOH
1_555
67.6
A
HOH
131
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
132
J
O
HOH
1_555
132.1
A
HOH
134
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
132
J
O
HOH
1_555
150.5
B
HOH
129
J
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
132
J
O
HOH
1_555
73.3
B
HOH
130
J
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
132
J
O
HOH
1_555
77.1
A
HOH
131
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
133
J
O
HOH
1_555
66.0
A
HOH
134
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
133
J
O
HOH
1_555
67.2
B
HOH
129
J
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
133
J
O
HOH
1_555
71.4
B
HOH
130
J
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
133
J
O
HOH
1_555
116.8
B
HOH
132
J
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
B
HOH
133
J
O
HOH
1_555
131.8
B
DG
16
B
OP1
DG
6
1_555
B
CA
23
F
CA
CA
1_555
B
HOH
121
J
O
HOH
1_555
105.7
B
DG
16
B
OP1
DG
6
1_555
B
CA
23
F
CA
CA
1_555
B
HOH
122
J
O
HOH
1_555
96.5
B
HOH
121
J
O
HOH
1_555
B
CA
23
F
CA
CA
1_555
B
HOH
122
J
O
HOH
1_555
69.4
B
DG
16
B
OP1
DG
6
1_555
B
CA
23
F
CA
CA
1_555
B
HOH
123
J
O
HOH
1_555
93.5
B
HOH
121
J
O
HOH
1_555
B
CA
23
F
CA
CA
1_555
B
HOH
123
J
O
HOH
1_555
142.9
B
HOH
122
J
O
HOH
1_555
B
CA
23
F
CA
CA
1_555
B
HOH
123
J
O
HOH
1_555
77.2
B
HOH
135
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
136
J
O
HOH
1_555
132.4
B
HOH
135
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
137
J
O
HOH
1_555
83.5
B
HOH
136
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
137
J
O
HOH
1_555
144.0
B
HOH
135
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
138
J
O
HOH
1_555
130.1
B
HOH
136
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
138
J
O
HOH
1_555
79.7
B
HOH
137
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
138
J
O
HOH
1_555
76.4
B
HOH
135
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
139
J
O
HOH
1_555
144.1
B
HOH
136
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
139
J
O
HOH
1_555
74.0
B
HOH
137
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
139
J
O
HOH
1_555
72.9
B
HOH
138
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
139
J
O
HOH
1_555
70.3
B
HOH
135
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
140
J
O
HOH
1_555
77.2
B
HOH
136
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
140
J
O
HOH
1_555
84.5
B
HOH
137
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
140
J
O
HOH
1_555
104.9
B
HOH
138
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
140
J
O
HOH
1_555
152.0
B
HOH
139
J
O
HOH
1_555
B
CA
26
H
CA
CA
1_555
B
HOH
140
J
O
HOH
1_555
83.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
B
O
O
HOH
HOH
61
107
1.87
1
4.19
0.30
108.30
112.49
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
7.04
1.10
110.50
117.54
A
A
A
O3'
P
OP2
DC
DT
DT
1
2
2
Y
1
-4.51
0.60
127.20
122.69
A
A
A
C2
N3
C4
DT
DT
DT
2
2
2
N
1
-5.10
0.60
119.90
114.80
A
A
A
N3
C4
O4
DT
DT
DT
2
2
2
N
1
-5.12
0.80
109.40
104.28
A
A
A
O5'
C5'
C4'
DC
DC
DC
3
3
3
N
1
3.57
0.50
119.90
123.47
A
A
A
C2
N3
C4
DC
DC
DC
3
3
3
N
1
-2.57
0.40
121.90
119.33
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
1
4.42
0.60
118.90
123.32
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
1
7.46
1.20
119.70
127.16
A
A
A
C3'
O3'
P
DC
DC
DT
3
3
4
Y
1
-9.51
1.50
119.60
110.09
A
A
A
OP1
P
OP2
DT
DT
DT
4
4
4
N
1
-6.71
0.80
109.40
102.69
A
A
A
O5'
C5'
C4'
DT
DT
DT
4
4
4
N
1
-6.89
0.70
108.00
101.11
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
4.44
0.60
114.60
119.04
A
A
A
N1
C2
N3
DT
DT
DT
4
4
4
N
1
-5.54
0.60
127.20
121.66
A
A
A
C2
N3
C4
DT
DT
DT
4
4
4
N
1
4.09
0.60
115.20
119.29
A
A
A
N3
C4
C5
DT
DT
DT
4
4
4
N
1
11.72
1.20
119.70
131.42
A
A
A
C3'
O3'
P
DT
DT
DC
4
4
5
Y
1
-4.84
0.80
105.90
101.06
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
1
4.50
0.60
118.90
123.40
A
A
A
N1
C2
O2
DC
DC
DC
5
5
5
N
1
7.22
1.20
119.70
126.92
A
A
A
C3'
O3'
P
DC
DC
DG
5
5
6
Y
1
-5.35
0.80
109.40
104.05
A
A
A
O5'
C5'
C4'
DG
DG
DG
6
6
6
N
1
-5.33
0.80
102.40
97.07
A
A
A
C3'
C2'
C1'
DG
DG
DG
6
6
6
N
1
3.29
0.50
106.80
110.09
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
1
-3.80
0.60
125.10
121.30
A
A
A
C6
N1
C2
DG
DG
DG
6
6
6
N
1
3.43
0.50
111.50
114.93
A
A
A
C5
C6
N1
DG
DG
DG
6
6
6
N
1
8.31
1.10
109.80
118.11
A
A
A
C5'
C4'
O4'
DA
DA
DA
7
7
7
N
1
4.63
0.60
118.60
123.23
A
A
A
C6
N1
C2
DA
DA
DA
7
7
7
N
1
-3.92
0.50
117.70
113.78
A
A
A
C5
C6
N1
DA
DA
DA
7
7
7
N
1
4.50
0.60
118.60
123.10
A
A
A
N1
C6
N6
DA
DA
DA
7
7
7
N
1
7.42
1.10
110.50
117.92
A
A
A
O3'
P
OP2
DA
DG
DG
7
8
8
Y
1
-5.14
0.80
109.40
104.26
A
A
A
O5'
C5'
C4'
DG
DG
DG
8
8
8
N
1
-11.90
1.60
120.90
109.00
A
A
A
P
O5'
C5'
DG
DG
DG
8
8
8
N
1
3.65
0.60
123.90
127.55
A
A
A
N1
C2
N3
DG
DG
DG
8
8
8
N
1
-3.74
0.50
111.90
108.16
A
A
A
C2
N3
C4
DG
DG
DG
8
8
8
N
1
-2.49
0.40
106.40
103.91
A
A
A
C8
N9
C4
DG
DG
DG
8
8
8
N
1
-5.61
0.70
119.90
114.29
A
A
A
N3
C2
N2
DG
DG
DG
8
8
8
N
1
5.55
0.30
108.30
113.85
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
1
-3.85
0.50
129.30
125.45
A
A
A
N1
C2
N3
DA
DA
DA
9
9
9
N
1
10.21
1.50
119.60
129.81
A
A
A
OP1
P
OP2
DG
DG
DG
10
10
10
N
1
-7.41
0.80
109.40
101.99
A
A
A
O5'
C5'
C4'
DG
DG
DG
10
10
10
N
1
6.71
0.30
108.30
115.01
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
-4.00
0.60
125.10
121.10
A
A
A
C6
N1
C2
DG
DG
DG
10
10
10
N
1
3.55
0.50
111.50
115.05
A
A
A
C5
C6
N1
DG
DG
DG
10
10
10
N
1
3.78
0.50
106.80
110.58
B
B
B
O4'
C1'
C2'
DC
DC
DC
11
11
11
N
1
3.13
0.30
108.30
111.43
B
B
B
O4'
C1'
N1
DC
DC
DC
11
11
11
N
1
-5.12
0.80
109.40
104.28
B
B
B
O5'
C5'
C4'
DT
DT
DT
12
12
12
N
1
-4.40
0.60
127.20
122.80
B
B
B
C2
N3
C4
DT
DT
DT
12
12
12
N
1
3.91
0.60
115.20
119.11
B
B
B
N3
C4
C5
DT
DT
DT
12
12
12
N
1
-8.39
0.80
109.40
101.01
B
B
B
O5'
C5'
C4'
DC
DC
DC
13
13
13
N
1
3.67
0.30
108.30
111.97
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
3.38
0.50
119.90
123.28
B
B
B
C2
N3
C4
DC
DC
DC
13
13
13
N
1
1.82
0.30
108.30
110.12
B
B
B
O4'
C1'
N1
DT
DT
DT
14
14
14
N
1
3.93
0.60
114.60
118.53
B
B
B
N1
C2
N3
DT
DT
DT
14
14
14
N
1
-6.94
0.80
123.10
116.16
B
B
B
N1
C2
O2
DT
DT
DT
14
14
14
N
1
-4.55
0.70
124.90
120.35
B
B
B
C5
C4
O4
DT
DT
DT
14
14
14
N
1
11.76
1.20
119.70
131.46
B
B
B
C3'
O3'
P
DT
DT
DC
14
14
15
Y
1
6.95
1.10
110.50
117.45
B
B
B
O3'
P
OP2
DT
DC
DC
14
15
15
Y
1
-2.73
0.40
121.90
119.17
B
B
B
N3
C4
C5
DC
DC
DC
15
15
15
N
1
7.28
1.10
110.50
117.78
B
B
B
O3'
P
OP2
DC
DG
DG
15
16
16
Y
1
-6.37
0.80
109.40
103.03
B
B
B
O5'
C5'
C4'
DG
DG
DG
16
16
16
N
1
3.18
0.30
108.30
111.48
B
B
B
O4'
C1'
N9
DG
DG
DG
16
16
16
N
1
7.06
1.10
109.80
116.86
B
B
B
C5'
C4'
O4'
DA
DA
DA
17
17
17
N
1
5.02
0.60
118.60
123.62
B
B
B
C6
N1
C2
DA
DA
DA
17
17
17
N
1
-4.72
0.50
129.30
124.58
B
B
B
N1
C2
N3
DA
DA
DA
17
17
17
N
1
-3.44
0.50
117.70
114.26
B
B
B
C5
C6
N1
DA
DA
DA
17
17
17
N
1
6.58
0.60
118.60
125.18
B
B
B
N1
C6
N6
DA
DA
DA
17
17
17
N
1
-7.19
0.80
109.40
102.21
B
B
B
O5'
C5'
C4'
DG
DG
DG
18
18
18
N
1
5.63
0.30
108.30
113.93
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
1
-5.27
0.80
102.40
97.13
B
B
B
C3'
C2'
C1'
DA
DA
DA
19
19
19
N
1
4.95
0.50
106.80
111.75
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
1
-4.67
0.50
129.30
124.63
B
B
B
N1
C2
N3
DA
DA
DA
19
19
19
N
1
4.60
0.50
110.60
115.20
B
B
B
C2
N3
C4
DA
DA
DA
19
19
19
N
1
-6.67
0.80
109.40
102.73
B
B
B
O5'
C5'
C4'
DG
DG
DG
20
20
20
N
1
5.98
0.30
108.30
114.28
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
1
A
A
O3'
P
DC
DT
3
4
-0.087
0.012
1.607
1.520
Y
1
A
A
O4'
C1'
DT
DT
4
4
0.115
0.011
1.420
1.535
N
1
A
A
O4'
C4'
DT
DT
4
4
-0.079
0.010
1.446
1.367
N
1
A
A
P
O5'
DC
DC
5
5
0.081
0.010
1.593
1.674
N
1
A
A
O4'
C4'
DA
DA
7
7
-0.064
0.010
1.446
1.382
N
1
A
A
C5
N7
DA
DA
9
9
0.037
0.006
1.388
1.425
N
1
B
B
C2'
C1'
DC
DC
11
11
-0.066
0.010
1.518
1.452
N
1
B
B
N3
C4
DT
DT
14
14
-0.067
0.008
1.382
1.315
N
1
B
B
O4'
C4'
DC
DC
15
15
-0.063
0.010
1.446
1.383
N
1
B
B
C5'
C4'
DG
DG
16
16
-0.069
0.011
1.509
1.440
N
1
B
B
O4'
C4'
DG
DG
18
18
-0.090
0.010
1.446
1.356
N
1
B
B
C6
N1
DA
DA
19
19
0.046
0.007
1.351
1.397
N
1
B
B
C5
N7
DA
DA
19
19
-0.038
0.006
1.388
1.350
N
1
B
B
C8
N9
DA
DA
19
19
-0.061
0.008
1.373
1.312
N
1
A
A
OP1
O
DT
HOH
4
87
1.91
1_555
1_545
1
B
B
O3'
O
DG
HOH
20
80
2.03
1_555
4_545
1
B
B
C3'
O
DG
HOH
20
80
2.07
1_555
4_545
1
B
B
C2'
O
DG
HOH
20
80
2.08
1_555
4_545
0.2000000
1.700
8.000
4946
1
2.000
TR
isotropic
TR
isotropic
1.700
8.000
82
524
38
404
0
3.632
6.000
4.141
6.000
4.587
6.000
5.106
6.000
0.021
0.025
0.036
0.035
0.037
0.025
0.045
0.035
0.021
0.020
0.166
0.150
0.087
0.100
0.103
0.100
fix
fix
1.700
196D
4946
1
87.000
refinement
NUCLSQ
CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
metalc
2.416
A
DC
5
A
OP2
DC
5
1_555
A
CA
22
D
CA
CA
1_555
metalc
2.435
A
CA
21
C
CA
CA
1_555
A
HOH
111
I
O
HOH
1_555
metalc
2.491
A
CA
21
C
CA
CA
1_555
A
HOH
112
I
O
HOH
1_555
metalc
2.481
A
CA
21
C
CA
CA
1_555
A
HOH
113
I
O
HOH
1_555
metalc
2.511
A
CA
21
C
CA
CA
1_555
B
HOH
109
J
O
HOH
1_555
metalc
2.471
A
CA
21
C
CA
CA
1_555
B
HOH
110
J
O
HOH
1_555
metalc
2.488
A
CA
21
C
CA
CA
1_555
B
HOH
114
J
O
HOH
1_555
metalc
2.436
A
CA
21
C
CA
CA
1_555
B
HOH
115
J
O
HOH
1_555
metalc
2.403
A
CA
22
D
CA
CA
1_555
A
HOH
116
I
O
HOH
1_555
metalc
2.404
A
CA
22
D
CA
CA
1_555
A
HOH
117
I
O
HOH
1_555
metalc
2.550
A
CA
22
D
CA
CA
1_555
A
HOH
118
I
O
HOH
1_555
metalc
2.454
A
CA
22
D
CA
CA
1_555
A
HOH
119
I
O
HOH
1_555
metalc
2.350
A
CA
22
D
CA
CA
1_555
A
HOH
120
I
O
HOH
1_555
metalc
2.537
A
CA
24
E
CA
CA
1_555
A
HOH
124
I
O
HOH
1_555
metalc
2.519
A
CA
24
E
CA
CA
1_555
A
HOH
126
I
O
HOH
1_555
metalc
2.354
A
CA
24
E
CA
CA
1_555
A
HOH
127
I
O
HOH
1_555
metalc
2.342
A
CA
24
E
CA
CA
1_555
B
HOH
125
J
O
HOH
1_555
metalc
2.364
A
CA
24
E
CA
CA
1_555
B
HOH
128
J
O
HOH
1_555
metalc
2.479
A
HOH
131
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
metalc
2.416
A
HOH
134
I
O
HOH
1_555
B
CA
25
G
CA
CA
1_555
metalc
2.591
B
DG
16
B
OP1
DG
6
1_555
B
CA
23
F
CA
CA
1_555
metalc
2.344
B
CA
23
F
CA
CA
1_555
B
HOH
121
J
O
HOH
1_555
metalc
2.396
B
CA
23
F
CA
CA
1_555
B
HOH
122
J
O
HOH
1_555
metalc
2.522
B
CA
23
F
CA
CA
1_555
B
HOH
123
J
O
HOH
1_555
metalc
2.395
B
CA
25
G
CA
CA
1_555
B
HOH
129
J
O
HOH
1_555
metalc
2.515
B
CA
25
G
CA
CA
1_555
B
HOH
130
J
O
HOH
1_555
metalc
2.431
B
CA
25
G
CA
CA
1_555
B
HOH
132
J
O
HOH
1_555
metalc
2.416
B
CA
25
G
CA
CA
1_555
B
HOH
133
J
O
HOH
1_555
metalc
2.523
B
CA
26
H
CA
CA
1_555
B
HOH
135
J
O
HOH
1_555
metalc
2.404
B
CA
26
H
CA
CA
1_555
B
HOH
136
J
O
HOH
1_555
metalc
2.488
B
CA
26
H
CA
CA
1_555
B
HOH
137
J
O
HOH
1_555
metalc
2.511
B
CA
26
H
CA
CA
1_555
B
HOH
138
J
O
HOH
1_555
metalc
2.538
B
CA
26
H
CA
CA
1_555
B
HOH
139
J
O
HOH
1_555
metalc
2.431
B
CA
26
H
CA
CA
1_555
B
HOH
140
J
O
HOH
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
20
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
20
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
20
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DT
2
A
N3
DT
2
1_555
B
DA
19
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
2
A
O4
DT
2
1_555
B
DA
19
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
18
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
18
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
18
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
B
DA
17
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
B
DA
17
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
16
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
16
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
16
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
15
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
15
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
15
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N1
DA
7
1_555
B
DT
14
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N6
DA
7
1_555
B
DT
14
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DG
8
A
N1
DG
8
1_555
B
DC
13
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
8
A
N2
DG
8
1_555
B
DC
13
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
8
A
O6
DG
8
1_555
B
DC
13
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N1
DA
9
1_555
B
DT
12
B
N3
DT
2
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N6
DA
9
1_555
B
DT
12
B
O4
DT
2
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
11
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
11
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
11
B
N4
DC
1
1_555
DNA
B-DNA, DOUBLE HELIX, DNA
196D
PDB
1
196D
1
10
196D
1
10
196D
A
1
1
10
11
20
196D
11
20
196D
B
1
1
10
BINDING SITE FOR RESIDUE CA A 21
A
CA
21
Software
7
BINDING SITE FOR RESIDUE CA A 22
A
CA
22
Software
7
BINDING SITE FOR RESIDUE CA B 23
B
CA
23
Software
5
BINDING SITE FOR RESIDUE CA A 24
A
CA
24
Software
5
BINDING SITE FOR RESIDUE CA B 25
B
CA
25
Software
6
BINDING SITE FOR RESIDUE CA B 26
B
CA
26
Software
6
A
HOH
111
I
HOH
7
1_555
A
HOH
112
I
HOH
7
1_555
A
HOH
113
I
HOH
7
1_555
B
HOH
109
J
HOH
7
1_555
B
HOH
110
J
HOH
7
1_555
B
HOH
114
J
HOH
7
1_555
B
HOH
115
J
HOH
7
1_555
A
DC
5
A
DC
5
7
1_555
A
DG
8
A
DG
8
7
1_545
A
HOH
116
I
HOH
7
1_555
A
HOH
117
I
HOH
7
1_555
A
HOH
118
I
HOH
7
1_555
A
HOH
119
I
HOH
7
1_555
A
HOH
120
I
HOH
7
1_555
A
DC
3
A
DC
3
5
1_565
B
DG
16
B
DG
6
5
1_555
B
HOH
121
J
HOH
5
1_555
B
HOH
122
J
HOH
5
1_555
B
HOH
123
J
HOH
5
1_555
A
HOH
124
I
HOH
5
1_555
A
HOH
126
I
HOH
5
1_555
A
HOH
127
I
HOH
5
1_555
B
HOH
125
J
HOH
5
1_555
B
HOH
128
J
HOH
5
1_555
A
HOH
131
I
HOH
6
1_555
A
HOH
134
I
HOH
6
1_555
B
HOH
129
J
HOH
6
1_555
B
HOH
130
J
HOH
6
1_555
B
HOH
132
J
HOH
6
1_555
B
HOH
133
J
HOH
6
1_555
B
HOH
135
J
HOH
6
1_555
B
HOH
136
J
HOH
6
1_555
B
HOH
137
J
HOH
6
1_555
B
HOH
138
J
HOH
6
1_555
B
HOH
139
J
HOH
6
1_555
B
HOH
140
J
HOH
6
1_555
5
C 1 2 1