0.023229
0.000000
0.000000
0.000000
0.022973
0.000000
0.000000
0.000000
0.016703
0.00000
0.00000
0.00000
Shigeta Junior, R.
Huddler, D.
Lindberg, U.
Schutt, C.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
43.050
43.530
59.870
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
5
19
32
10.1016/S0969-2126(97)00163-9
9016723
The crystal structure of a major allergen from plants.
1997
UK
Plant J.
PLJUED
2117
0960-7412
10
269
Arabidopsis Profilins are Functionally Similar to Yeast Profilins: Identification of a Vascular Bundle-Specific Profilin and a Pollen-Specific Profilin
1996
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
240
459
Crystallization and Structure Determination of Bovine Profilin at 2.0 A Resolution
1994
UK
Nature
NATUAS
0006
0028-0836
365
810
The Structure of Crystalline Profilin-Beta-Actin
1993
10.2210/pdb1a0k/pdb
pdb_00001a0k
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
YALE MIRRORS
IMAGE PLATE
1996-09
RIGAKU
YALE MIRRORS
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
14279.183
PROFILIN
1
man
polymer
18.015
water
26
nat
water
no
no
MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQG
AVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL
MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQG
AVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
thale cress
Arabidopsis
COLUMBIA
Escherichia
Escherichia coli
sample
BL21
CELLULAR CYTOSKELETON
PFN
3702
Arabidopsis thaliana
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
VIRUS
PET
1
1.90
22.
5.0
2.0 M AMMONIUM SULFATE, 0.1 M CITRATE PH 5.0, 10 MM DTT, 0.2 MM EDTA
database_2
pdbx_database_status
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Other
Refinement description
1
0
1998-03-18
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1997-12-02
REL
HOH
water
3NUL
PDB ENTRY 3NUL
PDB
experimental model
HOH
1
2
HOH
HOH
132
A
HOH
2
2
HOH
HOH
133
A
HOH
3
2
HOH
HOH
134
A
HOH
4
2
HOH
HOH
135
A
HOH
5
2
HOH
HOH
136
A
HOH
6
2
HOH
HOH
137
A
HOH
7
2
HOH
HOH
138
A
HOH
8
2
HOH
HOH
139
A
HOH
9
2
HOH
HOH
140
A
HOH
10
2
HOH
HOH
141
A
HOH
11
2
HOH
HOH
142
A
HOH
12
2
HOH
HOH
143
A
HOH
13
2
HOH
HOH
144
A
HOH
14
2
HOH
HOH
145
A
HOH
15
2
HOH
HOH
146
A
HOH
16
2
HOH
HOH
147
A
HOH
17
2
HOH
HOH
148
A
HOH
18
2
HOH
HOH
149
A
HOH
19
2
HOH
HOH
150
A
HOH
20
2
HOH
HOH
151
A
HOH
21
2
HOH
HOH
152
A
HOH
22
2
HOH
HOH
153
A
HOH
23
2
HOH
HOH
154
A
HOH
24
2
HOH
HOH
155
A
HOH
25
2
HOH
HOH
156
A
HOH
26
2
HOH
HOH
157
A
n
1
1
A
SER
2
n
2
SER
2
A
TRP
3
n
3
TRP
3
A
GLN
4
n
4
GLN
4
A
SER
5
n
5
SER
5
A
TYR
6
n
6
TYR
6
A
VAL
7
n
7
VAL
7
A
ASP
8
n
8
ASP
8
A
ASP
9
n
9
ASP
9
A
HIS
10
n
10
HIS
10
A
LEU
11
n
11
LEU
11
A
MET
12
n
12
MET
12
A
CYS
13
n
13
CYS
13
A
ASP
14
n
14
ASP
14
A
VAL
15
n
15
VAL
15
A
GLU
16
n
16
GLU
16
A
GLY
17
n
17
GLY
17
A
ASN
18
n
18
ASN
18
A
HIS
19
n
19
HIS
19
A
LEU
20
n
20
LEU
20
A
THR
21
n
21
THR
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
ALA
24
n
24
ALA
24
A
ILE
25
n
25
ILE
25
A
LEU
26
n
26
LEU
26
A
GLY
27
n
27
GLY
27
A
GLN
28
n
28
GLN
28
A
ASP
29
n
29
ASP
29
A
GLY
30
n
30
GLY
30
A
SER
31
n
31
SER
31
A
VAL
32
n
32
VAL
32
A
TRP
33
n
33
TRP
33
A
ALA
34
n
34
ALA
34
A
GLN
35
n
35
GLN
35
A
SER
36
n
36
SER
36
A
ALA
37
n
37
ALA
37
A
LYS
38
n
38
LYS
38
A
PHE
39
n
39
PHE
39
A
PRO
40
n
40
PRO
40
A
GLN
41
n
41
GLN
41
A
LEU
42
n
42
LEU
42
A
LYS
43
n
43
LYS
43
A
PRO
44
n
44
PRO
44
A
GLN
45
n
45
GLN
45
A
GLU
46
n
46
GLU
46
A
ILE
47
n
47
ILE
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
ILE
50
n
50
ILE
50
A
LYS
51
n
51
LYS
51
A
LYS
52
n
52
LYS
52
A
ASP
53
n
53
ASP
53
A
PHE
54
n
54
PHE
54
A
GLU
55
n
55
GLU
55
A
GLU
56
n
56
GLU
56
A
PRO
57
n
57
PRO
57
A
GLY
58
n
58
GLY
58
A
PHE
59
n
59
PHE
59
A
LEU
60
n
60
LEU
60
A
ALA
61
n
61
ALA
61
A
PRO
62
n
62
PRO
62
A
THR
63
n
63
THR
63
A
GLY
64
n
64
GLY
64
A
LEU
65
n
65
LEU
65
A
PHE
66
n
66
PHE
66
A
LEU
67
n
67
LEU
67
A
GLY
68
n
68
GLY
68
A
GLY
69
n
69
GLY
69
A
GLU
70
n
70
GLU
70
A
LYS
71
n
71
LYS
71
A
TYR
72
n
72
TYR
72
A
MET
73
n
73
MET
73
A
VAL
74
n
74
VAL
74
A
ILE
75
n
75
ILE
75
A
GLN
76
n
76
GLN
76
A
GLY
77
n
77
GLY
77
A
GLU
78
n
78
GLU
78
A
GLN
79
n
79
GLN
79
A
GLY
80
n
80
GLY
80
A
ALA
81
n
81
ALA
81
A
VAL
82
n
82
VAL
82
A
ILE
83
n
83
ILE
83
A
ARG
84
n
84
ARG
84
A
GLY
85
n
85
GLY
85
A
LYS
86
n
86
LYS
86
A
LYS
87
n
87
LYS
87
A
GLY
88
n
88
GLY
88
A
PRO
89
n
89
PRO
89
A
GLY
90
n
90
GLY
90
A
GLY
91
n
91
GLY
91
A
VAL
92
n
92
VAL
92
A
THR
93
n
93
THR
93
A
ILE
94
n
94
ILE
94
A
LYS
95
n
95
LYS
95
A
LYS
96
n
96
LYS
96
A
THR
97
n
97
THR
97
A
ASN
98
n
98
ASN
98
A
GLN
99
n
99
GLN
99
A
ALA
100
n
100
ALA
100
A
LEU
101
n
101
LEU
101
A
VAL
102
n
102
VAL
102
A
PHE
103
n
103
PHE
103
A
GLY
104
n
104
GLY
104
A
PHE
105
n
105
PHE
105
A
TYR
106
n
106
TYR
106
A
ASP
107
n
107
ASP
107
A
GLU
108
n
108
GLU
108
A
PRO
109
n
109
PRO
109
A
MET
110
n
110
MET
110
A
THR
111
n
111
THR
111
A
GLY
112
n
112
GLY
112
A
GLY
113
n
113
GLY
113
A
GLN
114
n
114
GLN
114
A
CYS
115
n
115
CYS
115
A
ASN
116
n
116
ASN
116
A
LEU
117
n
117
LEU
117
A
VAL
118
n
118
VAL
118
A
VAL
119
n
119
VAL
119
A
GLU
120
n
120
GLU
120
A
ARG
121
n
121
ARG
121
A
LEU
122
n
122
LEU
122
A
GLY
123
n
123
GLY
123
A
ASP
124
n
124
ASP
124
A
TYR
125
n
125
TYR
125
A
LEU
126
n
126
LEU
126
A
ILE
127
n
127
ILE
127
A
GLU
128
n
128
GLU
128
A
SER
129
n
129
SER
129
A
GLU
130
n
130
GLU
130
A
LEU
131
n
131
LEU
131
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
MET
73
A
O
MET
73
A
N
LYS
86
A
N
LYS
86
A
O
ILE
83
A
O
ILE
83
A
N
ILE
94
A
N
ILE
94
A
O
GLY
91
A
O
GLY
91
A
N
TYR
106
A
N
TYR
106
A
O
LEU
101
A
O
LEU
101
A
N
LEU
26
A
N
LEU
26
A
O
ILE
25
A
O
ILE
25
A
N
ALA
34
A
N
ALA
34
A
O
LEU
65
A
O
LEU
65
A
N
TYR
72
A
N
TYR
72
1
A
MET
1
A
MET
1
1
Y
1
A
A
H
H1
GLY
HOH
80
148
0.89
1
A
A
HG
H
SER
SER
2
5
1.21
1
A
A
H
H2
LEU
HOH
20
134
1.32
1
A
A
OD2
H1
ASP
HOH
124
154
1.55
1
A
GLU
16
75.75
33.46
1
A
THR
97
-105.81
-165.72
1
A
ALA
100
-123.67
-168.02
PARHCSDX.PRO
SOLVPAR.PRO
12.50
-0.02268
0.00818
-0.01218
-0.01178
0.00154
0.09292
0.2380000
0.1720000
0.1720000
2.2
6.0
418
5530
7.0
91.23
RANDOM
10000000.0
0.0001
1
DURING REFINEMENT
2.0
MOLECULAR REPLACEMENT
PDB ENTRY 3NUL
0.18
0.12
6.0
2.2
6.0
26
1286
0
0
1260
0.014
1.907
23.65
1.568
0.2483000
0.2104000
2.30
33
388
8
7.84
61.15
4.02
2.2
30.0
1A0K
5530
5.
0.0660000
0.0660000
1
0.2176
2.6
90.4
0.1200000
2.20
2.28
10.13
0.1290000
1.5
55.5
model building
X-PLOR
3.0
refinement
X-PLOR
3.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
3.0
PROFILIN I FROM ARABIDOPSIS THALIANA
1
N
N
2
N
N
A
TRP
3
A
TRP
3
HELX_P
HAS A SINGLE I+5 TURN
A
CYS
13
A
CYS
13
1
H1
11
A
PRO
44
A
PRO
44
HELX_P
A
GLU
55
A
GLU
55
1
H2
12
A
GLY
112
A
GLY
112
HELX_P
SEE REMARK 650
A
GLU
128
A
GLU
128
1
H4
17
CYTOSKELETON
PROFILIN, CYTOSKELETON, ACTIN-BINDING
A
GLU
108
A
GLU
108
1
A
PRO
109
A
PRO
109
-0.03
PROF1_ARATH
UNP
1
1
Q42449
MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQG
AVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL
1
131
1A0K
1
131
Q42449
A
1
1
131
6
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
MET
73
A
MET
73
A
ILE
75
A
ILE
75
A
VAL
82
A
VAL
82
A
LYS
87
A
LYS
87
A
GLY
90
A
GLY
90
A
LYS
96
A
LYS
96
A
ALA
100
A
ALA
100
A
ASP
107
A
ASP
107
A
ALA
22
A
ALA
22
A
GLY
27
A
GLY
27
A
VAL
32
A
VAL
32
A
GLN
35
A
GLN
35
A
LEU
65
A
LEU
65
A
LEU
67
A
LEU
67
A
GLU
70
A
GLU
70
A
TYR
72
A
TYR
72
BIOLOGICAL RELEVANCE NOT DETERMINED.
Unknown
6
BIOLOGICAL RELEVANCE NOT DETERMINED.
Unknown
17
POLYMORPHIC BETWEEN SPECIES.
Unknown
14
A
TRP
3
A
TRP
3
6
1_555
A
TYR
6
A
TYR
6
6
1_555
A
ILE
25
A
ILE
25
6
1_555
A
TRP
33
A
TRP
33
6
1_555
A
TYR
125
A
TYR
125
6
1_555
A
LEU
126
A
LEU
126
6
1_555
A
ASP
53
A
ASP
53
17
1_555
A
PHE
54
A
PHE
54
17
1_555
A
PRO
57
A
PRO
57
17
1_555
A
GLY
58
A
GLY
58
17
1_555
A
PHE
59
A
PHE
59
17
1_555
A
ALA
61
A
ALA
61
17
1_555
A
PRO
62
A
PRO
62
17
1_555
A
THR
63
A
THR
63
17
1_555
A
GLY
64
A
GLY
64
17
1_555
A
LEU
65
A
LEU
65
17
1_555
A
ILE
75
A
ILE
75
17
1_555
A
GLY
77
A
GLY
77
17
1_555
A
GLU
78
A
GLU
78
17
1_555
A
GLN
79
A
GLN
79
17
1_555
A
GLY
80
A
GLY
80
17
1_555
A
VAL
82
A
VAL
82
17
1_555
A
ILE
83
A
ILE
83
17
1_555
A
ALA
61
A
ALA
61
14
1_555
A
PRO
62
A
PRO
62
14
1_555
A
MET
73
A
MET
73
14
1_555
A
GLN
76
A
GLN
76
14
1_555
A
VAL
82
A
VAL
82
14
1_555
A
ARG
84
A
ARG
84
14
1_555
A
LYS
86
A
LYS
86
14
1_555
A
LYS
87
A
LYS
87
14
1_555
A
THR
111
A
THR
111
14
1_555
A
GLY
112
A
GLY
112
14
1_555
A
GLY
113
A
GLY
113
14
1_555
A
ASN
116
A
ASN
116
14
1_555
A
LEU
117
A
LEU
117
14
1_555
A
ARG
121
A
ARG
121
14
1_555
19
P 21 21 21