0.009713
0.005608
0.000000
0.000000
0.011216
0.000000
0.000000
0.000000
0.017889
0.00000
0.00000
0.00000
Subramanya, H.S.
Arciszewska, L.K.
Baker, R.A.
Bird, L.E.
Sherratt, D.J.
Wigley, D.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
102.950
102.950
55.900
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
N
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
UK
EMBO J.
EMJODG
0897
0261-4189
16
5178
5187
10.1093/emboj/16.17.5178
9311978
Crystal structure of the site-specific recombinase, XerD.
1997
10.2210/pdb1a0p/pdb
pdb_00001a0p
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1997-01
MARRESEARCH
M
x-ray
1
0.87
1.0
PX9.6
SRS
0.87
SYNCHROTRON
SRS BEAMLINE PX9.6
33308.191
SITE-SPECIFIC RECOMBINASE XERD
1
man
polymer
18.015
water
105
nat
water
no
no
QDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRL
FQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISL
RQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLS
PHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQ
QDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRL
FQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISL
RQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLS
PHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
293
562
Escherichia coli
562
Escherichia coli
DS9009
2.57
52.08
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Other
1
0
1998-03-18
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1997-12-05
REL
REL
HOH
water
HOH
1
2
HOH
HOH
293
A
HOH
2
2
HOH
HOH
294
A
HOH
3
2
HOH
HOH
295
A
HOH
4
2
HOH
HOH
296
A
HOH
5
2
HOH
HOH
297
A
HOH
6
2
HOH
HOH
298
A
HOH
7
2
HOH
HOH
299
A
HOH
8
2
HOH
HOH
300
A
HOH
9
2
HOH
HOH
301
A
HOH
10
2
HOH
HOH
302
A
HOH
11
2
HOH
HOH
303
A
HOH
12
2
HOH
HOH
304
A
HOH
13
2
HOH
HOH
305
A
HOH
14
2
HOH
HOH
306
A
HOH
15
2
HOH
HOH
307
A
HOH
16
2
HOH
HOH
308
A
HOH
17
2
HOH
HOH
309
A
HOH
18
2
HOH
HOH
310
A
HOH
19
2
HOH
HOH
311
A
HOH
20
2
HOH
HOH
312
A
HOH
21
2
HOH
HOH
313
A
HOH
22
2
HOH
HOH
314
A
HOH
23
2
HOH
HOH
315
A
HOH
24
2
HOH
HOH
316
A
HOH
25
2
HOH
HOH
317
A
HOH
26
2
HOH
HOH
318
A
HOH
27
2
HOH
HOH
319
A
HOH
28
2
HOH
HOH
320
A
HOH
29
2
HOH
HOH
321
A
HOH
30
2
HOH
HOH
322
A
HOH
31
2
HOH
HOH
323
A
HOH
32
2
HOH
HOH
324
A
HOH
33
2
HOH
HOH
325
A
HOH
34
2
HOH
HOH
326
A
HOH
35
2
HOH
HOH
327
A
HOH
36
2
HOH
HOH
328
A
HOH
37
2
HOH
HOH
329
A
HOH
38
2
HOH
HOH
330
A
HOH
39
2
HOH
HOH
331
A
HOH
40
2
HOH
HOH
332
A
HOH
41
2
HOH
HOH
333
A
HOH
42
2
HOH
HOH
334
A
HOH
43
2
HOH
HOH
335
A
HOH
44
2
HOH
HOH
336
A
HOH
45
2
HOH
HOH
337
A
HOH
46
2
HOH
HOH
338
A
HOH
47
2
HOH
HOH
339
A
HOH
48
2
HOH
HOH
340
A
HOH
49
2
HOH
HOH
341
A
HOH
50
2
HOH
HOH
342
A
HOH
51
2
HOH
HOH
343
A
HOH
52
2
HOH
HOH
344
A
HOH
53
2
HOH
HOH
345
A
HOH
54
2
HOH
HOH
346
A
HOH
55
2
HOH
HOH
347
A
HOH
56
2
HOH
HOH
348
A
HOH
57
2
HOH
HOH
349
A
HOH
58
2
HOH
HOH
350
A
HOH
59
2
HOH
HOH
351
A
HOH
60
2
HOH
HOH
352
A
HOH
61
2
HOH
HOH
353
A
HOH
62
2
HOH
HOH
354
A
HOH
63
2
HOH
HOH
355
A
HOH
64
2
HOH
HOH
356
A
HOH
65
2
HOH
HOH
357
A
HOH
66
2
HOH
HOH
358
A
HOH
67
2
HOH
HOH
359
A
HOH
68
2
HOH
HOH
360
A
HOH
69
2
HOH
HOH
361
A
HOH
70
2
HOH
HOH
362
A
HOH
71
2
HOH
HOH
363
A
HOH
72
2
HOH
HOH
364
A
HOH
73
2
HOH
HOH
365
A
HOH
74
2
HOH
HOH
366
A
HOH
75
2
HOH
HOH
367
A
HOH
76
2
HOH
HOH
368
A
HOH
77
2
HOH
HOH
369
A
HOH
78
2
HOH
HOH
370
A
HOH
79
2
HOH
HOH
371
A
HOH
80
2
HOH
HOH
372
A
HOH
81
2
HOH
HOH
373
A
HOH
82
2
HOH
HOH
374
A
HOH
83
2
HOH
HOH
375
A
HOH
84
2
HOH
HOH
376
A
HOH
85
2
HOH
HOH
377
A
HOH
86
2
HOH
HOH
378
A
HOH
87
2
HOH
HOH
379
A
HOH
88
2
HOH
HOH
380
A
HOH
89
2
HOH
HOH
381
A
HOH
90
2
HOH
HOH
382
A
HOH
91
2
HOH
HOH
383
A
HOH
92
2
HOH
HOH
384
A
HOH
93
2
HOH
HOH
385
A
HOH
94
2
HOH
HOH
386
A
HOH
95
2
HOH
HOH
387
A
HOH
96
2
HOH
HOH
388
A
HOH
97
2
HOH
HOH
389
A
HOH
98
2
HOH
HOH
390
A
HOH
99
2
HOH
HOH
391
A
HOH
100
2
HOH
HOH
392
A
HOH
101
2
HOH
HOH
393
A
HOH
102
2
HOH
HOH
394
A
HOH
103
2
HOH
HOH
395
A
HOH
104
2
HOH
HOH
396
A
HOH
105
2
HOH
HOH
397
A
GLN
3
n
1
GLN
3
A
ASP
4
n
2
ASP
4
A
LEU
5
n
3
LEU
5
A
ALA
6
n
4
ALA
6
A
ARG
7
n
5
ARG
7
A
ILE
8
n
6
ILE
8
A
GLU
9
n
7
GLU
9
A
GLN
10
n
8
GLN
10
A
PHE
11
n
9
PHE
11
A
LEU
12
n
10
LEU
12
A
ASP
13
n
11
ASP
13
A
ALA
14
n
12
ALA
14
A
LEU
15
n
13
LEU
15
A
TRP
16
n
14
TRP
16
A
LEU
17
n
15
LEU
17
A
GLU
18
n
16
GLU
18
A
LYS
19
n
17
LYS
19
A
ASN
20
n
18
ASN
20
A
LEU
21
n
19
LEU
21
A
ALA
22
n
20
ALA
22
A
GLU
23
n
21
GLU
23
A
ASN
24
n
22
ASN
24
A
THR
25
n
23
THR
25
A
LEU
26
n
24
LEU
26
A
ASN
27
n
25
ASN
27
A
ALA
28
n
26
ALA
28
A
TYR
29
n
27
TYR
29
A
ARG
30
n
28
ARG
30
A
ARG
31
n
29
ARG
31
A
ASP
32
n
30
ASP
32
A
LEU
33
n
31
LEU
33
A
SER
34
n
32
SER
34
A
MET
35
n
33
MET
35
A
MET
36
n
34
MET
36
A
VAL
37
n
35
VAL
37
A
GLU
38
n
36
GLU
38
A
TRP
39
n
37
TRP
39
A
LEU
40
n
38
LEU
40
A
HIS
41
n
39
HIS
41
A
HIS
42
n
40
HIS
42
A
ARG
43
n
41
ARG
43
A
GLY
44
n
42
GLY
44
A
LEU
45
n
43
LEU
45
A
THR
46
n
44
THR
46
A
LEU
47
n
45
LEU
47
A
ALA
48
n
46
ALA
48
A
THR
49
n
47
THR
49
A
ALA
50
n
48
ALA
50
A
GLN
51
n
49
GLN
51
A
SER
52
n
50
SER
52
A
ASP
53
n
51
ASP
53
A
ASP
54
n
52
ASP
54
A
LEU
55
n
53
LEU
55
A
GLN
56
n
54
GLN
56
A
ALA
57
n
55
ALA
57
A
LEU
58
n
56
LEU
58
A
LEU
59
n
57
LEU
59
A
ALA
60
n
58
ALA
60
A
GLU
61
n
59
GLU
61
A
ARG
62
n
60
ARG
62
A
LEU
63
n
61
LEU
63
A
n
62
64
A
n
63
65
A
n
64
66
A
n
65
67
A
n
66
68
A
n
67
69
A
n
68
70
A
SER
71
n
69
SER
71
A
SER
72
n
70
SER
72
A
ALA
73
n
71
ALA
73
A
ARG
74
n
72
ARG
74
A
LEU
75
n
73
LEU
75
A
LEU
76
n
74
LEU
76
A
SER
77
n
75
SER
77
A
ALA
78
n
76
ALA
78
A
VAL
79
n
77
VAL
79
A
ARG
80
n
78
ARG
80
A
ARG
81
n
79
ARG
81
A
LEU
82
n
80
LEU
82
A
PHE
83
n
81
PHE
83
A
GLN
84
n
82
GLN
84
A
TYR
85
n
83
TYR
85
A
LEU
86
n
84
LEU
86
A
TYR
87
n
85
TYR
87
A
ARG
88
n
86
ARG
88
A
GLU
89
n
87
GLU
89
A
LYS
90
n
88
LYS
90
A
PHE
91
n
89
PHE
91
A
ARG
92
n
90
ARG
92
A
GLU
93
n
91
GLU
93
A
ASP
94
n
92
ASP
94
A
ASP
95
n
93
ASP
95
A
PRO
96
n
94
PRO
96
A
SER
97
n
95
SER
97
A
ALA
98
n
96
ALA
98
A
HIS
99
n
97
HIS
99
A
LEU
100
n
98
LEU
100
A
n
99
101
A
n
100
102
A
n
101
103
A
n
102
104
A
n
103
105
A
n
104
106
A
n
105
107
A
n
106
108
A
n
107
109
A
n
108
110
A
LYS
111
n
109
LYS
111
A
ASP
112
n
110
ASP
112
A
LEU
113
n
111
LEU
113
A
SER
114
n
112
SER
114
A
GLU
115
n
113
GLU
115
A
ALA
116
n
114
ALA
116
A
GLN
117
n
115
GLN
117
A
VAL
118
n
116
VAL
118
A
GLU
119
n
117
GLU
119
A
ARG
120
n
118
ARG
120
A
LEU
121
n
119
LEU
121
A
LEU
122
n
120
LEU
122
A
GLN
123
n
121
GLN
123
A
ALA
124
n
122
ALA
124
A
PRO
125
n
123
PRO
125
A
LEU
126
n
124
LEU
126
A
ILE
127
n
125
ILE
127
A
ASP
128
n
126
ASP
128
A
GLN
129
n
127
GLN
129
A
PRO
130
n
128
PRO
130
A
LEU
131
n
129
LEU
131
A
GLU
132
n
130
GLU
132
A
LEU
133
n
131
LEU
133
A
ARG
134
n
132
ARG
134
A
ASP
135
n
133
ASP
135
A
LYS
136
n
134
LYS
136
A
ALA
137
n
135
ALA
137
A
MET
138
n
136
MET
138
A
LEU
139
n
137
LEU
139
A
GLU
140
n
138
GLU
140
A
VAL
141
n
139
VAL
141
A
LEU
142
n
140
LEU
142
A
TYR
143
n
141
TYR
143
A
ALA
144
n
142
ALA
144
A
THR
145
n
143
THR
145
A
GLY
146
n
144
GLY
146
A
LEU
147
n
145
LEU
147
A
ARG
148
n
146
ARG
148
A
VAL
149
n
147
VAL
149
A
SER
150
n
148
SER
150
A
GLU
151
n
149
GLU
151
A
LEU
152
n
150
LEU
152
A
VAL
153
n
151
VAL
153
A
GLY
154
n
152
GLY
154
A
LEU
155
n
153
LEU
155
A
THR
156
n
154
THR
156
A
MET
157
n
155
MET
157
A
SER
158
n
156
SER
158
A
ASP
159
n
157
ASP
159
A
ILE
160
n
158
ILE
160
A
SER
161
n
159
SER
161
A
LEU
162
n
160
LEU
162
A
ARG
163
n
161
ARG
163
A
GLN
164
n
162
GLN
164
A
GLY
165
n
163
GLY
165
A
VAL
166
n
164
VAL
166
A
VAL
167
n
165
VAL
167
A
ARG
168
n
166
ARG
168
A
VAL
169
n
167
VAL
169
A
ILE
170
n
168
ILE
170
A
GLY
171
n
169
GLY
171
A
LYS
172
n
170
LYS
172
A
GLY
173
n
171
GLY
173
A
ASN
174
n
172
ASN
174
A
LYS
175
n
173
LYS
175
A
GLU
176
n
174
GLU
176
A
ARG
177
n
175
ARG
177
A
LEU
178
n
176
LEU
178
A
VAL
179
n
177
VAL
179
A
PRO
180
n
178
PRO
180
A
LEU
181
n
179
LEU
181
A
GLY
182
n
180
GLY
182
A
GLU
183
n
181
GLU
183
A
GLU
184
n
182
GLU
184
A
ALA
185
n
183
ALA
185
A
VAL
186
n
184
VAL
186
A
TYR
187
n
185
TYR
187
A
TRP
188
n
186
TRP
188
A
LEU
189
n
187
LEU
189
A
GLU
190
n
188
GLU
190
A
THR
191
n
189
THR
191
A
TYR
192
n
190
TYR
192
A
LEU
193
n
191
LEU
193
A
GLU
194
n
192
GLU
194
A
HIS
195
n
193
HIS
195
A
GLY
196
n
194
GLY
196
A
ARG
197
n
195
ARG
197
A
PRO
198
n
196
PRO
198
A
TRP
199
n
197
TRP
199
A
LEU
200
n
198
LEU
200
A
LEU
201
n
199
LEU
201
A
ASN
202
n
200
ASN
202
A
GLY
203
n
201
GLY
203
A
VAL
204
n
202
VAL
204
A
SER
205
n
203
SER
205
A
ILE
206
n
204
ILE
206
A
ASP
207
n
205
ASP
207
A
VAL
208
n
206
VAL
208
A
LEU
209
n
207
LEU
209
A
PHE
210
n
208
PHE
210
A
PRO
211
n
209
PRO
211
A
SER
212
n
210
SER
212
A
GLN
213
n
211
GLN
213
A
ARG
214
n
212
ARG
214
A
ALA
215
n
213
ALA
215
A
GLN
216
n
214
GLN
216
A
GLN
217
n
215
GLN
217
A
MET
218
n
216
MET
218
A
THR
219
n
217
THR
219
A
ARG
220
n
218
ARG
220
A
GLN
221
n
219
GLN
221
A
THR
222
n
220
THR
222
A
PHE
223
n
221
PHE
223
A
TRP
224
n
222
TRP
224
A
HIS
225
n
223
HIS
225
A
ARG
226
n
224
ARG
226
A
ILE
227
n
225
ILE
227
A
LYS
228
n
226
LYS
228
A
HIS
229
n
227
HIS
229
A
TYR
230
n
228
TYR
230
A
ALA
231
n
229
ALA
231
A
VAL
232
n
230
VAL
232
A
LEU
233
n
231
LEU
233
A
ALA
234
n
232
ALA
234
A
GLY
235
n
233
GLY
235
A
ILE
236
n
234
ILE
236
A
ASP
237
n
235
ASP
237
A
SER
238
n
236
SER
238
A
GLU
239
n
237
GLU
239
A
LYS
240
n
238
LYS
240
A
LEU
241
n
239
LEU
241
A
SER
242
n
240
SER
242
A
PRO
243
n
241
PRO
243
A
HIS
244
n
242
HIS
244
A
VAL
245
n
243
VAL
245
A
LEU
246
n
244
LEU
246
A
ARG
247
n
245
ARG
247
A
HIS
248
n
246
HIS
248
A
ALA
249
n
247
ALA
249
A
PHE
250
n
248
PHE
250
A
ALA
251
n
249
ALA
251
A
THR
252
n
250
THR
252
A
HIS
253
n
251
HIS
253
A
LEU
254
n
252
LEU
254
A
LEU
255
n
253
LEU
255
A
ASN
256
n
254
ASN
256
A
HIS
257
n
255
HIS
257
A
GLY
258
n
256
GLY
258
A
ALA
259
n
257
ALA
259
A
ASP
260
n
258
ASP
260
A
LEU
261
n
259
LEU
261
A
ARG
262
n
260
ARG
262
A
VAL
263
n
261
VAL
263
A
VAL
264
n
262
VAL
264
A
GLN
265
n
263
GLN
265
A
MET
266
n
264
MET
266
A
LEU
267
n
265
LEU
267
A
LEU
268
n
266
LEU
268
A
n
267
269
A
n
268
270
A
SER
271
n
269
SER
271
A
ASP
272
n
270
ASP
272
A
LEU
273
n
271
LEU
273
A
SER
274
n
272
SER
274
A
THR
275
n
273
THR
275
A
THR
276
n
274
THR
276
A
GLN
277
n
275
GLN
277
A
ILE
278
n
276
ILE
278
A
TYR
279
n
277
TYR
279
A
THR
280
n
278
THR
280
A
HIS
281
n
279
HIS
281
A
VAL
282
n
280
VAL
282
A
ALA
283
n
281
ALA
283
A
THR
284
n
282
THR
284
A
GLU
285
n
283
GLU
285
A
ARG
286
n
284
ARG
286
A
LEU
287
n
285
LEU
287
A
ARG
288
n
286
ARG
288
A
GLN
289
n
287
GLN
289
A
LEU
290
n
288
LEU
290
A
HIS
291
n
289
HIS
291
A
GLN
292
n
290
GLN
292
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
167
A
O
VAL
165
A
N
VAL
179
A
N
VAL
177
1
A
GLU
64
A
GLU
62
1
Y
1
A
GLY
65
A
GLY
63
1
Y
1
A
GLY
66
A
GLY
64
1
Y
1
A
TYR
67
A
TYR
65
1
Y
1
A
LYS
68
A
LYS
66
1
Y
1
A
ALA
69
A
ALA
67
1
Y
1
A
THR
70
A
THR
68
1
Y
1
A
ALA
101
A
ALA
99
1
Y
1
A
SER
102
A
SER
100
1
Y
1
A
PRO
103
A
PRO
101
1
Y
1
A
LYS
104
A
LYS
102
1
Y
1
A
LEU
105
A
LEU
103
1
Y
1
A
PRO
106
A
PRO
104
1
Y
1
A
GLN
107
A
GLN
105
1
Y
1
A
ARG
108
A
ARG
106
1
Y
1
A
LEU
109
A
LEU
107
1
Y
1
A
PRO
110
A
PRO
108
1
Y
1
A
GLY
269
A
GLY
267
1
Y
1
A
HIS
270
A
HIS
268
1
Y
1
A
GLN
10
-13.08
1
A
ALA
14
-13.05
1
A
THR
25
-16.12
1
A
ALA
28
-14.46
1
A
ARG
30
10.09
1
A
HIS
41
-11.17
1
A
ASP
54
-12.35
1
A
ARG
74
-10.12
1
A
LEU
113
-10.51
1
A
ALA
124
14.48
1
A
PRO
125
15.28
1
A
ILE
127
-12.26
1
A
LEU
133
-11.18
1
A
MET
138
-13.06
1
A
LEU
142
-13.61
1
A
ALA
144
11.87
1
A
ARG
163
-11.43
1
A
LYS
175
12.63
1
A
GLU
176
10.82
1
A
VAL
179
14.01
1
A
GLN
213
-10.67
1
A
THR
219
-14.57
1
A
TRP
224
-12.02
1
A
PRO
243
-10.01
1
A
VAL
245
-13.52
1
A
A
GLU
ARG
61
62
-134.99
1
A
A
GLY
ASN
173
174
145.27
1
11.14
1.40
123.60
134.74
A
A
A
CD
NE
CZ
ARG
ARG
ARG
30
30
30
N
1
16.95
1.40
123.60
140.55
A
A
A
CD
NE
CZ
ARG
ARG
ARG
43
43
43
N
1
17.25
2.10
111.80
129.05
A
A
A
CG
CD
NE
ARG
ARG
ARG
62
62
62
N
1
10.35
1.40
123.60
133.95
A
A
A
CD
NE
CZ
ARG
ARG
ARG
62
62
62
N
1
4.31
0.50
120.30
124.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
74
74
74
N
1
14.57
2.10
111.80
126.37
A
A
A
CG
CD
NE
ARG
ARG
ARG
88
88
88
N
1
22.11
1.40
123.60
145.71
A
A
A
CD
NE
CZ
ARG
ARG
ARG
88
88
88
N
1
3.91
0.50
120.30
124.21
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
88
88
88
N
1
-15.40
1.80
110.60
95.20
A
A
A
N
CA
CB
ARG
ARG
ARG
92
92
92
N
1
9.91
1.40
123.60
133.51
A
A
A
CD
NE
CZ
ARG
ARG
ARG
92
92
92
N
1
5.78
0.50
120.30
126.08
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
1
-9.88
0.50
120.30
110.42
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
92
92
92
N
1
-4.50
0.50
120.30
115.80
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
148
148
148
N
1
6.71
0.50
120.30
127.01
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
148
148
148
N
1
10.77
0.90
118.30
129.07
A
A
A
CB
CG
OD2
ASP
ASP
ASP
159
159
159
N
1
18.35
1.40
123.60
141.95
A
A
A
CD
NE
CZ
ARG
ARG
ARG
168
168
168
N
1
6.01
0.50
120.30
126.31
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
168
168
168
N
1
-3.98
0.50
120.30
116.32
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
168
168
168
N
1
7.03
0.50
120.30
127.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
177
177
177
N
1
-6.99
0.50
120.30
113.31
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
177
177
177
N
1
15.72
1.40
123.60
139.32
A
A
A
CD
NE
CZ
ARG
ARG
ARG
197
197
197
N
1
6.55
0.50
120.30
126.85
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
197
197
197
N
1
12.19
1.70
113.30
125.49
A
A
A
CA
CB
CG
MET
MET
MET
218
218
218
N
1
8.48
1.40
123.60
132.08
A
A
A
CD
NE
CZ
ARG
ARG
ARG
220
220
220
N
1
-5.44
0.50
120.30
114.86
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
226
226
226
N
1
21.37
1.40
123.60
144.97
A
A
A
CD
NE
CZ
ARG
ARG
ARG
286
286
286
N
1
7.63
0.50
120.30
127.93
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
286
286
286
N
1
-4.01
0.50
120.30
116.29
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
286
286
286
N
1
20.11
1.40
123.60
143.71
A
A
A
CD
NE
CZ
ARG
ARG
ARG
288
288
288
N
1
3.62
0.50
120.30
123.92
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
288
288
288
N
1
A
LEU
21
61.21
-135.90
1
A
ASN
24
-49.38
-76.31
1
A
LEU
45
-38.61
165.84
1
A
ALA
57
-47.07
-70.45
1
A
ARG
62
-21.64
139.75
1
A
ASP
112
-62.13
0.70
1
A
ILE
127
-68.45
14.35
1
A
LEU
147
-48.70
163.81
1
A
HIS
257
-137.62
-32.36
1
A
LEU
261
-114.61
51.63
1
A
ARG
262
-34.94
-82.82
1
A
VAL
263
-104.06
62.11
1
A
LEU
267
-167.12
16.86
0.287
0.224
2.5
10.0
10637
8.
RANDOM
1
MIR
2.5
10.0
105
2310
0
0
2205
0.013
0.020
0.041
0.040
0.045
0.050
2.5
15.
1A0P
11671
0.0480000
1
3.0
98.9
2.5
2.59
0.1900000
99.9
model building
CCP4
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
phasing
CCP4
SITE-SPECIFIC RECOMBINASE, XERD
1
N
N
2
N
N
A
ASP
4
A
ASP
2
HELX_P
A
GLU
18
A
GLU
16
1
1
15
A
GLU
23
A
GLU
21
HELX_P
A
HIS
42
A
HIS
40
1
2
20
A
SER
52
A
SER
50
HELX_P
A
ALA
60
A
ALA
58
1
3
9
A
SER
72
A
SER
70
HELX_P
A
ARG
88
A
ARG
86
1
4
17
A
GLU
115
A
GLU
113
HELX_P
A
ALA
124
A
ALA
122
1
5
10
A
PRO
130
A
PRO
128
HELX_P
A
THR
145
A
THR
143
1
6
16
A
VAL
149
A
VAL
147
HELX_P
A
LEU
152
A
LEU
150
1
7
4
A
MET
157
A
MET
155
HELX_P
A
ASP
159
A
ASP
157
5
8
3
A
GLU
183
A
GLU
181
HELX_P
A
HIS
195
A
HIS
193
1
9
13
A
ARG
197
A
ARG
195
HELX_P
A
LEU
201
A
LEU
199
1
10
5
A
ARG
220
A
ARG
218
HELX_P
A
LEU
233
A
LEU
231
1
11
14
A
PRO
243
A
PRO
241
HELX_P
A
HIS
257
A
HIS
255
1
12
15
A
ARG
262
A
ARG
260
HELX_P
A
VAL
264
A
VAL
262
5
13
3
A
THR
275
A
THR
273
HELX_P
A
LEU
290
A
LEU
288
1
14
16
DNA RECOMBINATION
XERD, RECOMBINASE, DNA BINDING, DNA RECOMBINATION
XERD_ECOLI
UNP
1
1
P0A8P8
MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVR
RLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
3
292
1A0P
3
292
P0A8P8
A
1
1
290
2
anti-parallel
A
VAL
166
A
VAL
164
A
ILE
170
A
ILE
168
A
GLU
176
A
GLU
174
A
PRO
180
A
PRO
178
170
P 65