0.023095
0.000000
0.000000
0.000000
0.017921
0.000000
0.000000
0.000000
0.007698
0.00000
0.00000
0.00000
Elrod-Erickson, M.
Benson, T.E.
Pabo, C.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
43.300
55.800
129.900
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
UK
Structure
STRUE6
2005
0969-2126
6
451
464
10.1016/S0969-2126(98)00047-1
9562555
High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
1998
UK
Structure
STRUE6
2005
0969-2126
4
1171
Zif268 Protein-DNA Complex Refined at 1.6 A: A Model System for Understanding Zinc Finger-DNA Interactions
1996
US
Science
SCIEAS
0038
0036-8075
263
671
673
Zinc Finger Phage: Affinity Selection of Fingers with New DNA-Binding Specificities
1994
US
Science
SCIEAS
0038
0036-8075
252
809
817
Zinc Finger-DNA Recognition: Crystal Structure of a Zif268-DNA Complex at 2.1 A
1991
10.2210/pdb1a1g/pdb
pdb_00001a1g
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
130.00
1
YALE MIRRORS
IMAGE PLATE
1996-01
RIGAKU RAXIS IIC
YALE MIRRORS
M
x-ray
1
1.0
ROTATING ANODE
RIGAKU RU200
3430.233
DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3')
1
syn
polymer
3279.151
DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3')
1
syn
polymer
10768.371
DSNR ZINC FINGER PEPTIDE
1
man
polymer
65.409
ZINC ION
3
syn
non-polymer
18.015
water
155
nat
water
THREE FINGER ZIF268 PEPTIDE
no
no
(DA)(DG)(DC)(DG)(DT)(DG)(DG)(DG)(DC)(DG)(DT)
AGCGTGGGCGT
B
polydeoxyribonucleotide
no
no
(DT)(DA)(DC)(DG)(DC)(DC)(DC)(DA)(DC)(DG)(DC)
TACGCCCACGC
C
polydeoxyribonucleotide
no
no
MERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR
HTKIHLRQKD
MERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR
HTKIHLRQKD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PDSNR
1
2.24
45.20
VAPOR DIFFUSION, HANGING DROP
8.0
25% PEG 1450, 200 MM NACL, 25 MM BIS-TRIS PROPANE PH 8.0, VAPOR DIFFUSION, HANGING DROP
WATER
1
NACL
1
BIS-TRIS PROPANE
1
PRECIPITATING SOLUTION
1
WATER
2
NACL
2
BIS-TRIS PROPANE
2
PEG 1450
2
-6.862
1
19
B
2
C
61
4.242
B_DG2:DC61_C
1
-4.655
-0.216
-0.180
-0.042
16.664
1
19
B
3
C
60
1.673
B_DC3:DG60_C
2
-4.177
0.803
-0.606
-0.327
-3.994
1
19
B
4
C
59
4.136
B_DG4:DC59_C
3
-6.800
-0.635
-0.135
-0.268
2.719
1
20
B
5
C
58
5.022
B_DT5:DA58_C
4
-2.634
0.327
-0.065
0.187
5.225
1
19
B
6
C
57
3.800
B_DG6:DC57_C
5
-10.154
-0.328
0.240
-0.227
2.093
1
19
B
7
C
56
-0.390
B_DG7:DC56_C
6
-6.692
-0.388
0.041
-0.137
-7.490
1
19
B
8
C
55
0.343
B_DG8:DC55_C
7
-8.562
-0.445
-0.240
-0.228
2.971
1
19
B
9
C
54
6.823
B_DC9:DG54_C
8
-3.607
0.072
-0.209
0.012
1.033
1
19
B
10
C
53
6.306
B_DG10:DC53_C
9
-8.631
-0.415
0.166
-0.057
4.077
1
20
B
11
C
52
0.185
B_DT11:DA52_C
10
-6.803
0.345
0.112
0.090
2.734
25.967
B
B
2
3
12.504
C
C
61
60
2.755
5.543
0.770
-0.255
BB_DG2DC3:DG60DC61_CC
1
4.894
-11.038
24.909
-1.877
-0.558
3.532
33.149
B
B
3
4
19.599
C
C
60
59
3.673
10.888
-0.727
-0.035
BB_DC3DG4:DC59DG60_CC
2
-7.465
13.436
30.475
-2.169
-0.171
3.028
31.635
B
B
4
5
11.837
C
C
59
58
3.234
6.410
0.293
-0.692
BB_DG4DT5:DA58DC59_CC
3
-0.462
0.852
30.992
-2.417
-0.621
3.382
33.265
B
B
5
6
3.867
C
C
58
57
3.276
2.204
-1.001
0.023
BB_DT5DG6:DC57DA58_CC
4
-5.018
8.804
32.823
-0.337
0.891
3.209
33.309
B
B
6
7
9.630
C
C
57
56
3.333
5.490
-0.708
-0.787
BB_DG6DG7:DC56DC57_CC
5
-2.650
4.649
32.762
-2.296
0.789
3.625
36.595
B
B
7
8
2.164
C
C
56
55
3.643
1.358
-0.171
-0.177
BB_DG7DG8:DC55DC56_CC
6
1.547
-2.466
36.539
-0.489
0.508
2.773
28.744
B
B
8
9
12.110
C
C
55
54
2.903
5.969
0.926
-0.473
BB_DG8DC9:DG54DC55_CC
7
0.911
-1.849
28.115
-2.128
-1.686
3.383
35.000
B
B
9
10
10.715
C
C
54
53
3.362
6.398
-0.563
0.189
BB_DC9DG10:DC53DG54_CC
8
-3.810
6.381
34.223
-0.691
0.338
3.156
34.897
B
B
10
11
5.539
C
C
53
52
3.225
3.317
-0.416
-0.699
BB_DG10DT11:DA52DC53_CC
9
-0.850
1.420
34.734
-1.657
0.569
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Refinement description
1
0
1998-06-10
1
1
2008-05-22
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
NDB
1997-12-10
REL
ZN
ZINC ION
HOH
water
1AAY
PDB ENTRY 1AAY, WITHOUT WATERS AND WITHOUT SIDE CHAINS FOR RESIDUES 18 - 24
PDB
experimental model
ZN
201
4
ZN
ZN
201
A
ZN
202
4
ZN
ZN
202
A
ZN
203
4
ZN
ZN
203
A
HOH
338
5
HOH
HOH
338
B
HOH
339
5
HOH
HOH
339
B
HOH
340
5
HOH
HOH
340
B
HOH
342
5
HOH
HOH
342
B
HOH
344
5
HOH
HOH
344
B
HOH
347
5
HOH
HOH
347
B
HOH
348
5
HOH
HOH
348
B
HOH
349
5
HOH
HOH
349
B
HOH
352
5
HOH
HOH
352
B
HOH
361
5
HOH
HOH
361
B
HOH
362
5
HOH
HOH
362
B
HOH
364
5
HOH
HOH
364
B
HOH
365
5
HOH
HOH
365
B
HOH
366
5
HOH
HOH
366
B
HOH
374
5
HOH
HOH
374
B
HOH
378
5
HOH
HOH
378
B
HOH
386
5
HOH
HOH
386
B
HOH
387
5
HOH
HOH
387
B
HOH
392
5
HOH
HOH
392
B
HOH
393
5
HOH
HOH
393
B
HOH
394
5
HOH
HOH
394
B
HOH
395
5
HOH
HOH
395
B
HOH
398
5
HOH
HOH
398
B
HOH
400
5
HOH
HOH
400
B
HOH
401
5
HOH
HOH
401
B
HOH
417
5
HOH
HOH
417
B
HOH
421
5
HOH
HOH
421
B
HOH
422
5
HOH
HOH
422
B
HOH
423
5
HOH
HOH
423
B
HOH
424
5
HOH
HOH
424
B
HOH
428
5
HOH
HOH
428
B
HOH
429
5
HOH
HOH
429
B
HOH
442
5
HOH
HOH
442
B
HOH
443
5
HOH
HOH
443
B
HOH
444
5
HOH
HOH
444
B
HOH
445
5
HOH
HOH
445
B
HOH
446
5
HOH
HOH
446
B
HOH
447
5
HOH
HOH
447
B
HOH
451
5
HOH
HOH
451
B
HOH
323
5
HOH
HOH
323
C
HOH
324
5
HOH
HOH
324
C
HOH
325
5
HOH
HOH
325
C
HOH
326
5
HOH
HOH
326
C
HOH
327
5
HOH
HOH
327
C
HOH
333
5
HOH
HOH
333
C
HOH
360
5
HOH
HOH
360
C
HOH
363
5
HOH
HOH
363
C
HOH
367
5
HOH
HOH
367
C
HOH
368
5
HOH
HOH
368
C
HOH
369
5
HOH
HOH
369
C
HOH
370
5
HOH
HOH
370
C
HOH
373
5
HOH
HOH
373
C
HOH
375
5
HOH
HOH
375
C
HOH
376
5
HOH
HOH
376
C
HOH
377
5
HOH
HOH
377
C
HOH
396
5
HOH
HOH
396
C
HOH
397
5
HOH
HOH
397
C
HOH
399
5
HOH
HOH
399
C
HOH
402
5
HOH
HOH
402
C
HOH
419
5
HOH
HOH
419
C
HOH
420
5
HOH
HOH
420
C
HOH
425
5
HOH
HOH
425
C
HOH
438
5
HOH
HOH
438
C
HOH
440
5
HOH
HOH
440
C
HOH
441
5
HOH
HOH
441
C
HOH
448
5
HOH
HOH
448
C
HOH
449
5
HOH
HOH
449
C
HOH
453
5
HOH
HOH
453
C
HOH
455
5
HOH
HOH
455
C
HOH
301
5
HOH
HOH
301
A
HOH
302
5
HOH
HOH
302
A
HOH
303
5
HOH
HOH
303
A
HOH
304
5
HOH
HOH
304
A
HOH
305
5
HOH
HOH
305
A
HOH
306
5
HOH
HOH
306
A
HOH
307
5
HOH
HOH
307
A
HOH
308
5
HOH
HOH
308
A
HOH
309
5
HOH
HOH
309
A
HOH
310
5
HOH
HOH
310
A
HOH
311
5
HOH
HOH
311
A
HOH
312
5
HOH
HOH
312
A
HOH
313
5
HOH
HOH
313
A
HOH
314
5
HOH
HOH
314
A
HOH
315
5
HOH
HOH
315
A
HOH
316
5
HOH
HOH
316
A
HOH
317
5
HOH
HOH
317
A
HOH
318
5
HOH
HOH
318
A
HOH
319
5
HOH
HOH
319
A
HOH
320
5
HOH
HOH
320
A
HOH
321
5
HOH
HOH
321
A
HOH
322
5
HOH
HOH
322
A
HOH
328
5
HOH
HOH
328
A
HOH
329
5
HOH
HOH
329
A
HOH
330
5
HOH
HOH
330
A
HOH
331
5
HOH
HOH
331
A
HOH
332
5
HOH
HOH
332
A
HOH
334
5
HOH
HOH
334
A
HOH
335
5
HOH
HOH
335
A
HOH
336
5
HOH
HOH
336
A
HOH
337
5
HOH
HOH
337
A
HOH
341
5
HOH
HOH
341
A
HOH
343
5
HOH
HOH
343
A
HOH
345
5
HOH
HOH
345
A
HOH
346
5
HOH
HOH
346
A
HOH
350
5
HOH
HOH
350
A
HOH
351
5
HOH
HOH
351
A
HOH
353
5
HOH
HOH
353
A
HOH
354
5
HOH
HOH
354
A
HOH
355
5
HOH
HOH
355
A
HOH
356
5
HOH
HOH
356
A
HOH
357
5
HOH
HOH
357
A
HOH
358
5
HOH
HOH
358
A
HOH
359
5
HOH
HOH
359
A
HOH
371
5
HOH
HOH
371
A
HOH
372
5
HOH
HOH
372
A
HOH
379
5
HOH
HOH
379
A
HOH
380
5
HOH
HOH
380
A
HOH
381
5
HOH
HOH
381
A
HOH
382
5
HOH
HOH
382
A
HOH
383
5
HOH
HOH
383
A
HOH
384
5
HOH
HOH
384
A
HOH
385
5
HOH
HOH
385
A
HOH
388
5
HOH
HOH
388
A
HOH
389
5
HOH
HOH
389
A
HOH
390
5
HOH
HOH
390
A
HOH
391
5
HOH
HOH
391
A
HOH
403
5
HOH
HOH
403
A
HOH
404
5
HOH
HOH
404
A
HOH
405
5
HOH
HOH
405
A
HOH
406
5
HOH
HOH
406
A
HOH
407
5
HOH
HOH
407
A
HOH
408
5
HOH
HOH
408
A
HOH
409
5
HOH
HOH
409
A
HOH
410
5
HOH
HOH
410
A
HOH
411
5
HOH
HOH
411
A
HOH
412
5
HOH
HOH
412
A
HOH
413
5
HOH
HOH
413
A
HOH
414
5
HOH
HOH
414
A
HOH
415
5
HOH
HOH
415
A
HOH
416
5
HOH
HOH
416
A
HOH
418
5
HOH
HOH
418
A
HOH
426
5
HOH
HOH
426
A
HOH
427
5
HOH
HOH
427
A
HOH
430
5
HOH
HOH
430
A
HOH
431
5
HOH
HOH
431
A
HOH
432
5
HOH
HOH
432
A
HOH
433
5
HOH
HOH
433
A
HOH
434
5
HOH
HOH
434
A
HOH
435
5
HOH
HOH
435
A
HOH
436
5
HOH
HOH
436
A
HOH
437
5
HOH
HOH
437
A
HOH
439
5
HOH
HOH
439
A
HOH
450
5
HOH
HOH
450
A
HOH
452
5
HOH
HOH
452
A
HOH
454
5
HOH
HOH
454
A
A
1
n
1
DA
1
B
G
2
n
2
DG
2
B
C
3
n
3
DC
3
B
G
4
n
4
DG
4
B
T
5
n
5
DT
5
B
G
6
n
6
DG
6
B
G
7
n
7
DG
7
B
G
8
n
8
DG
8
B
C
9
n
9
DC
9
B
G
10
n
10
DG
10
B
T
11
n
11
DT
11
B
T
51
n
1
DT
51
C
A
52
n
2
DA
52
C
C
53
n
3
DC
53
C
G
54
n
4
DG
54
C
C
55
n
5
DC
55
C
C
56
n
6
DC
56
C
C
57
n
7
DC
57
C
A
58
n
8
DA
58
C
C
59
n
9
DC
59
C
G
60
n
10
DG
60
C
C
61
n
11
DC
61
C
n
1
101
A
n
2
102
A
ARG
103
n
3
ARG
103
A
PRO
104
n
4
PRO
104
A
TYR
105
n
5
TYR
105
A
ALA
106
n
6
ALA
106
A
CYS
107
n
7
CYS
107
A
PRO
108
n
8
PRO
108
A
VAL
109
n
9
VAL
109
A
GLU
110
n
10
GLU
110
A
SER
111
n
11
SER
111
A
CYS
112
n
12
CYS
112
A
ASP
113
n
13
ASP
113
A
ARG
114
n
14
ARG
114
A
ARG
115
n
15
ARG
115
A
PHE
116
n
16
PHE
116
A
SER
117
n
17
SER
117
A
ASP
118
n
18
ASP
118
A
SER
119
n
19
SER
119
A
SER
120
n
20
SER
120
A
ASN
121
n
21
ASN
121
A
LEU
122
n
22
LEU
122
A
THR
123
n
23
THR
123
A
ARG
124
n
24
ARG
124
A
HIS
125
n
25
HIS
125
A
ILE
126
n
26
ILE
126
A
ARG
127
n
27
ARG
127
A
ILE
128
n
28
ILE
128
A
HIS
129
n
29
HIS
129
A
THR
130
n
30
THR
130
A
GLY
131
n
31
GLY
131
A
GLN
132
n
32
GLN
132
A
LYS
133
n
33
LYS
133
A
PRO
134
n
34
PRO
134
A
PHE
135
n
35
PHE
135
A
GLN
136
n
36
GLN
136
A
CYS
137
n
37
CYS
137
A
ARG
138
n
38
ARG
138
A
ILE
139
n
39
ILE
139
A
CYS
140
n
40
CYS
140
A
MET
141
n
41
MET
141
A
ARG
142
n
42
ARG
142
A
ASN
143
n
43
ASN
143
A
PHE
144
n
44
PHE
144
A
SER
145
n
45
SER
145
A
ARG
146
n
46
ARG
146
A
SER
147
n
47
SER
147
A
ASP
148
n
48
ASP
148
A
HIS
149
n
49
HIS
149
A
LEU
150
n
50
LEU
150
A
THR
151
n
51
THR
151
A
THR
152
n
52
THR
152
A
HIS
153
n
53
HIS
153
A
ILE
154
n
54
ILE
154
A
ARG
155
n
55
ARG
155
A
THR
156
n
56
THR
156
A
HIS
157
n
57
HIS
157
A
THR
158
n
58
THR
158
A
GLY
159
n
59
GLY
159
A
GLU
160
n
60
GLU
160
A
LYS
161
n
61
LYS
161
A
PRO
162
n
62
PRO
162
A
PHE
163
n
63
PHE
163
A
ALA
164
n
64
ALA
164
A
CYS
165
n
65
CYS
165
A
ASP
166
n
66
ASP
166
A
ILE
167
n
67
ILE
167
A
CYS
168
n
68
CYS
168
A
GLY
169
n
69
GLY
169
A
ARG
170
n
70
ARG
170
A
LYS
171
n
71
LYS
171
A
PHE
172
n
72
PHE
172
A
ALA
173
n
73
ALA
173
A
ARG
174
n
74
ARG
174
A
SER
175
n
75
SER
175
A
ASP
176
n
76
ASP
176
A
GLU
177
n
77
GLU
177
A
ARG
178
n
78
ARG
178
A
LYS
179
n
79
LYS
179
A
ARG
180
n
80
ARG
180
A
HIS
181
n
81
HIS
181
A
THR
182
n
82
THR
182
A
LYS
183
n
83
LYS
183
A
ILE
184
n
84
ILE
184
A
HIS
185
n
85
HIS
185
A
LEU
186
n
86
LEU
186
A
n
87
187
A
n
88
188
A
n
89
189
A
n
90
190
A
author_defined_assembly
3
trimeric
A
CYS
107
C
SG
CYS
7
1_555
A
ZN
201
D
ZN
ZN
1_555
A
CYS
112
C
SG
CYS
12
1_555
104.0
A
CYS
107
C
SG
CYS
7
1_555
A
ZN
201
D
ZN
ZN
1_555
A
HIS
125
C
NE2
HIS
25
1_555
87.8
A
CYS
112
C
SG
CYS
12
1_555
A
ZN
201
D
ZN
ZN
1_555
A
HIS
125
C
NE2
HIS
25
1_555
107.0
A
CYS
107
C
SG
CYS
7
1_555
A
ZN
201
D
ZN
ZN
1_555
A
HIS
129
C
NE2
HIS
29
1_555
110.1
A
CYS
112
C
SG
CYS
12
1_555
A
ZN
201
D
ZN
ZN
1_555
A
HIS
129
C
NE2
HIS
29
1_555
130.9
A
HIS
125
C
NE2
HIS
25
1_555
A
ZN
201
D
ZN
ZN
1_555
A
HIS
129
C
NE2
HIS
29
1_555
108.6
A
CYS
137
C
SG
CYS
37
1_555
A
ZN
202
E
ZN
ZN
1_555
A
CYS
140
C
SG
CYS
40
1_555
120.7
A
CYS
137
C
SG
CYS
37
1_555
A
ZN
202
E
ZN
ZN
1_555
A
HIS
153
C
NE2
HIS
53
1_555
110.4
A
CYS
140
C
SG
CYS
40
1_555
A
ZN
202
E
ZN
ZN
1_555
A
HIS
153
C
NE2
HIS
53
1_555
104.7
A
CYS
137
C
SG
CYS
37
1_555
A
ZN
202
E
ZN
ZN
1_555
A
HIS
157
C
NE2
HIS
57
1_555
99.7
A
CYS
140
C
SG
CYS
40
1_555
A
ZN
202
E
ZN
ZN
1_555
A
HIS
157
C
NE2
HIS
57
1_555
122.3
A
HIS
153
C
NE2
HIS
53
1_555
A
ZN
202
E
ZN
ZN
1_555
A
HIS
157
C
NE2
HIS
57
1_555
96.4
A
CYS
165
C
SG
CYS
65
1_555
A
ZN
203
F
ZN
ZN
1_555
A
CYS
168
C
SG
CYS
68
1_555
117.7
A
CYS
165
C
SG
CYS
65
1_555
A
ZN
203
F
ZN
ZN
1_555
A
HIS
181
C
NE2
HIS
81
1_555
106.6
A
CYS
168
C
SG
CYS
68
1_555
A
ZN
203
F
ZN
ZN
1_555
A
HIS
181
C
NE2
HIS
81
1_555
105.0
A
CYS
165
C
SG
CYS
65
1_555
A
ZN
203
F
ZN
ZN
1_555
A
HIS
185
C
NE2
HIS
85
1_555
107.8
A
CYS
168
C
SG
CYS
68
1_555
A
ZN
203
F
ZN
ZN
1_555
A
HIS
185
C
NE2
HIS
85
1_555
116.8
A
HIS
181
C
NE2
HIS
81
1_555
A
ZN
203
F
ZN
ZN
1_555
A
HIS
185
C
NE2
HIS
85
1_555
101.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
135
C
O
PHE
35
A
N
PHE
144
C
N
PHE
44
A
N
PHE
163
C
N
PHE
63
A
O
PHE
172
C
O
PHE
72
1
A
MET
101
C
MET
1
1
Y
1
A
GLU
102
C
GLU
2
1
Y
1
A
ARG
187
C
ARG
87
1
Y
1
A
GLN
188
C
GLN
88
1
Y
1
A
LYS
189
C
LYS
89
1
Y
1
A
ASP
190
C
ASP
90
1
Y
1
A
ASP
113
-141.73
49.12
1
A
SER
119
-66.38
22.53
PARHCSDX.PRO
TOPHCSDX.PRO
PARNDBX.DNA
TOPNDBX.DNA
34.50
2.8900
0.0000
0.0000
8.4870
0.0000
-4.710
0.2750000
0.008
0.2150000
0.2150000
1.900
20.000
1284
11737
10.900
91.800
BASED
100000.000
0.0100
1
RESTRAINED INDIVIDUAL
THROUGHOUT
0.000
ISOMORPHOUS MOLECULAR REPLACEMENT
PDB ENTRY 1AAY, WITHOUT WATERS AND WITHOUT SIDE CHAINS FOR RESIDUES 18 - 24
1.900
20.000
155
1298
3
445
695
0.004
0.08
18.2
1.18
0.846
1.500
1.495
2.000
1.413
2.000
2.440
2.500
0.3350000
0.03
0.3380000
1.99
120
759
8
13.70
53.50
1.900
20.000
1A1G
11768
-2.000
0.0340000
1
33.6000
3.100
91.800
1.900
1.970
3.700
0.1700000
1.300
53.50
model building
X-PLOR
refinement
X-PLOR
3.8
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
A
SER
119
C
SER
19
HELX_P
A
THR
130
C
THR
30
1
1
12
A
SER
147
C
SER
47
HELX_P
A
THR
158
C
THR
58
1
2
12
A
SER
175
C
SER
75
HELX_P
A
HIS
185
C
HIS
85
1
3
11
metalc
2.188
A
CYS
107
C
SG
CYS
7
1_555
A
ZN
201
D
ZN
ZN
1_555
metalc
2.297
A
CYS
112
C
SG
CYS
12
1_555
A
ZN
201
D
ZN
ZN
1_555
metalc
2.421
A
HIS
125
C
NE2
HIS
25
1_555
A
ZN
201
D
ZN
ZN
1_555
metalc
1.818
A
HIS
129
C
NE2
HIS
29
1_555
A
ZN
201
D
ZN
ZN
1_555
metalc
2.157
A
CYS
137
C
SG
CYS
37
1_555
A
ZN
202
E
ZN
ZN
1_555
metalc
2.263
A
CYS
140
C
SG
CYS
40
1_555
A
ZN
202
E
ZN
ZN
1_555
metalc
2.129
A
HIS
153
C
NE2
HIS
53
1_555
A
ZN
202
E
ZN
ZN
1_555
metalc
2.035
A
HIS
157
C
NE2
HIS
57
1_555
A
ZN
202
E
ZN
ZN
1_555
metalc
2.312
A
CYS
165
C
SG
CYS
65
1_555
A
ZN
203
F
ZN
ZN
1_555
metalc
2.301
A
CYS
168
C
SG
CYS
68
1_555
A
ZN
203
F
ZN
ZN
1_555
metalc
2.149
A
HIS
181
C
NE2
HIS
81
1_555
A
ZN
203
F
ZN
ZN
1_555
metalc
1.972
A
HIS
185
C
NE2
HIS
85
1_555
A
ZN
203
F
ZN
ZN
1_555
hydrog
WATSON-CRICK
B
DG
2
A
N1
DG
2
1_555
C
DC
61
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
B
DG
2
A
N2
DG
2
1_555
C
DC
61
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
B
DG
2
A
O6
DG
2
1_555
C
DC
61
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
B
DC
3
A
N3
DC
3
1_555
C
DG
60
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
B
DC
3
A
N4
DC
3
1_555
C
DG
60
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
B
DC
3
A
O2
DC
3
1_555
C
DG
60
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
B
DG
4
A
N1
DG
4
1_555
C
DC
59
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
B
DG
4
A
N2
DG
4
1_555
C
DC
59
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
B
DG
4
A
O6
DG
4
1_555
C
DC
59
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
B
DT
5
A
N3
DT
5
1_555
C
DA
58
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
B
DT
5
A
O4
DT
5
1_555
C
DA
58
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
B
DG
6
A
N1
DG
6
1_555
C
DC
57
B
N3
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
6
A
N2
DG
6
1_555
C
DC
57
B
O2
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
6
A
O6
DG
6
1_555
C
DC
57
B
N4
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
7
A
N1
DG
7
1_555
C
DC
56
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
B
DG
7
A
N2
DG
7
1_555
C
DC
56
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
B
DG
7
A
O6
DG
7
1_555
C
DC
56
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
B
DG
8
A
N1
DG
8
1_555
C
DC
55
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
B
DG
8
A
N2
DG
8
1_555
C
DC
55
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
B
DG
8
A
O6
DG
8
1_555
C
DC
55
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
B
DC
9
A
N3
DC
9
1_555
C
DG
54
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
B
DC
9
A
N4
DC
9
1_555
C
DG
54
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
B
DC
9
A
O2
DC
9
1_555
C
DG
54
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
B
DG
10
A
N1
DG
10
1_555
C
DC
53
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
B
DG
10
A
N2
DG
10
1_555
C
DC
53
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
B
DG
10
A
O6
DG
10
1_555
C
DC
53
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
B
DT
11
A
N3
DT
11
1_555
C
DA
52
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
B
DT
11
A
O4
DT
11
1_555
C
DA
52
B
N6
DA
2
1_555
TRANSCRIPTION/DNA
COMPLEX (ZINC FINGER-DNA), ZINC FINGER, DNA-BINDING PROTEIN, TRANSCRIPTION-DNA COMPLEX
EGR1_MOUSE
UNP
3
P08046
1A1G
PDB
1
1A1G
1A1G
PDB
2
1A1G
308
396
1A1G
102
190
P08046
A
1
2
90
1
11
1A1G
1
11
1A1G
B
2
1
11
51
61
1A1G
51
61
1A1G
C
3
1
11
1
ARG
variant
ASP
118
1A1G
A
P08046
UNP
324
18
1
ASP
variant
SER
120
1A1G
A
P08046
UNP
326
20
1
GLU
variant
ASN
121
1A1G
A
P08046
UNP
327
21
2
2
anti-parallel
anti-parallel
A
PHE
135
C
PHE
35
A
GLN
136
C
GLN
36
A
ASN
143
C
ASN
43
A
PHE
144
C
PHE
44
A
PHE
163
C
PHE
63
A
ALA
164
C
ALA
64
A
LYS
171
C
LYS
71
A
PHE
172
C
PHE
72
BINDING SITE FOR RESIDUE ZN A 201
A
ZN
201
Software
4
BINDING SITE FOR RESIDUE ZN A 202
A
ZN
202
Software
4
BINDING SITE FOR RESIDUE ZN A 203
A
ZN
203
Software
4
A
CYS
107
C
CYS
7
4
1_555
A
CYS
112
C
CYS
12
4
1_555
A
HIS
125
C
HIS
25
4
1_555
A
HIS
129
C
HIS
29
4
1_555
A
CYS
137
C
CYS
37
4
1_555
A
CYS
140
C
CYS
40
4
1_555
A
HIS
153
C
HIS
53
4
1_555
A
HIS
157
C
HIS
57
4
1_555
A
CYS
165
C
CYS
65
4
1_555
A
CYS
168
C
CYS
68
4
1_555
A
HIS
181
C
HIS
81
4
1_555
A
HIS
185
C
HIS
85
4
1_555
20
C 2 2 21