1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Mccoy, M.A. Stavridi, E.S. Waterman, J.L.F. Wieczorek, A. Opella, S.J. Halezonetis, T.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 S C N 128 N C N 129 N C N 130 N C N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N C N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N N N 168 S C N 169 N C N 170 N O N 171 N C N 172 N C N 173 N C N 174 N C N 175 N N N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C Y 197 N C Y 198 N C Y 199 N C Y 200 N C Y 201 N C Y 202 N C N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N N N 216 S C N 217 N C N 218 N O N 219 R C N 220 N O N 221 N C N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C Y 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C Y 242 N C N 243 N O N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing Y 193 N doub Y 194 N sing Y 195 N sing N 196 N sing Y 197 N doub N 198 N sing Y 199 N doub N 200 N sing Y 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing Y 232 N doub Y 233 N sing Y 234 N sing N 235 N sing Y 236 N doub N 237 N sing Y 238 N doub N 239 N sing Y 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing UK EMBO J. EMJODG 0897 0261-4189 16 6230 6236 10.1093/emboj/16.20.6230 9321402 Hydrophobic side-chain size is a determinant of the three-dimensional structure of the p53 oligomerization domain. 1997 10.2210/pdb1a1u/pdb pdb_00001a1u 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4210.639 P53 OLIGOMERIZATION M40K, F41I, L44Y 2 man polymer no no DGEYFTLQIRGRERFEKIREYNEALELKDAQAGKE DGEYFTLQIRGRERFEKIREYNEALELKDAQAGKE A,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample P53 TUMOR SUPPRESSOR 9606 Homo sapiens 562 Escherichia coli database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_sheet chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Other Data collection 1 0 1998-04-08 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 1 4 2024-05-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_sheet.number_strands Y BNL 1997-12-16 REL NO VIOLATIONS 40 1 HNCA HNCOCA CBCACONH HNCACB 3D 15N-EDITED TOCSY-HMQC 3D 15N-EDITED NOESY-HMQC HCCH-TOCSY 2D NOESY 2D COSY 2D TOCSY 3D 13C-EDITED NOESY 3D 13C-EDITED 13C-FILTERED HMQC-NOESY HNHA HMQC-J HNCA-J 7.0 313 K DETAILS CAN BE FOUND IN EMBO J., 16, 6230-6236 (1997). DG-SA BRUNGER refinement X-PLOR structure solution X-PLOR 600 Bruker DMX600 750 Bruker DMX750 n 1 24 A n 2 25 A GLU 26 n 3 GLU 26 A TYR 27 n 4 TYR 27 A PHE 28 n 5 PHE 28 A THR 29 n 6 THR 29 A LEU 30 n 7 LEU 30 A GLN 31 n 8 GLN 31 A ILE 32 n 9 ILE 32 A ARG 33 n 10 ARG 33 A GLY 34 n 11 GLY 34 A ARG 35 n 12 ARG 35 A GLU 36 n 13 GLU 36 A ARG 37 n 14 ARG 37 A PHE 38 n 15 PHE 38 A GLU 39 n 16 GLU 39 A LYS 40 n 17 LYS 40 A ILE 41 n 18 ILE 41 A ARG 42 n 19 ARG 42 A GLU 43 n 20 GLU 43 A TYR 44 n 21 TYR 44 A ASN 45 n 22 ASN 45 A GLU 46 n 23 GLU 46 A ALA 47 n 24 ALA 47 A LEU 48 n 25 LEU 48 A GLU 49 n 26 GLU 49 A LEU 50 n 27 LEU 50 A LYS 51 n 28 LYS 51 A ASP 52 n 29 ASP 52 A ALA 53 n 30 ALA 53 A GLN 54 n 31 GLN 54 A n 32 55 A n 33 56 A n 34 57 A n 35 58 A n 1 24 C n 2 25 C GLU 26 n 3 GLU 26 C TYR 27 n 4 TYR 27 C PHE 28 n 5 PHE 28 C THR 29 n 6 THR 29 C LEU 30 n 7 LEU 30 C GLN 31 n 8 GLN 31 C ILE 32 n 9 ILE 32 C ARG 33 n 10 ARG 33 C GLY 34 n 11 GLY 34 C ARG 35 n 12 ARG 35 C GLU 36 n 13 GLU 36 C ARG 37 n 14 ARG 37 C PHE 38 n 15 PHE 38 C GLU 39 n 16 GLU 39 C LYS 40 n 17 LYS 40 C ILE 41 n 18 ILE 41 C ARG 42 n 19 ARG 42 C GLU 43 n 20 GLU 43 C TYR 44 n 21 TYR 44 C ASN 45 n 22 ASN 45 C GLU 46 n 23 GLU 46 C ALA 47 n 24 ALA 47 C LEU 48 n 25 LEU 48 C GLU 49 n 26 GLU 49 C LEU 50 n 27 LEU 50 C LYS 51 n 28 LYS 51 C ASP 52 n 29 ASP 52 C ALA 53 n 30 ALA 53 C GLN 54 n 31 GLN 54 C n 32 55 C n 33 56 C n 34 57 C n 35 58 C author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ASP 24 A ASP 1 1 Y 1 A GLY 25 A GLY 2 1 Y 1 A ALA 55 A ALA 32 1 Y 1 A GLY 56 A GLY 33 1 Y 1 A LYS 57 A LYS 34 1 Y 1 A GLU 58 A GLU 35 1 Y 1 C ASP 24 B ASP 1 1 Y 1 C GLY 25 B GLY 2 1 Y 1 C ALA 55 B ALA 32 1 Y 1 C GLY 56 B GLY 33 1 Y 1 C LYS 57 B LYS 34 1 Y 1 C GLU 58 B GLU 35 1 Y 1 A C HG1 HG1 THR THR 29 29 1.35 1 A TYR 27 -73.06 -75.29 1 A ILE 32 -126.69 -70.56 1 A ARG 33 88.84 92.44 1 A ALA 53 -87.04 -87.30 1 C TYR 27 -74.66 -75.64 1 C ILE 32 -128.13 -69.67 1 C ARG 33 88.15 94.28 1 C ALA 53 -85.72 -86.22 model building X-PLOR refinement X-PLOR phasing X-PLOR SOLUTION STRUCTURE DETERMINATION OF A P53 MUTANT DIMERIZATION DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE 1 N N 1 N N A ARG 35 A ARG 12 HELX_P A ASP 52 A ASP 29 1 1 18 C ARG 35 B ARG 12 HELX_P C ASP 52 B ASP 29 1 2 18 ANTI-ONCOGENE P53, OLIGOMERIZATION DOMAIN, HUMAN, ANTI-ONCOGENE P53_HUMAN UNP 1 324 P04637 324 358 1A1U 24 58 P04637 A 1 1 35 324 358 1A1U 24 58 P04637 C 1 1 35 1 A THR 29 A THR 6 A GLN 31 A GLN 8 1 P 1