0.013680 0.000000 0.000000 0.000000 0.008511 0.000000 0.000000 0.000000 0.015773 0.00000 0.00000 0.00000 Kim, J.L. Morgenstern, K.A. Griffith, J.P. Dwyer, M.D. Thomson, J.A. Murcko, M.A. Lin, C. Caron, P.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 73.100 117.500 63.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H11 N O3 S2 197.276 n S,S-(2-HYDROXYETHYL)THIOCYSTEINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C9 H13 N2 O8 P 308.182 y 2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 6 89 100 10.1016/S0969-2126(98)00010-0 9493270 Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding. 1998 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MIRRORS IMAGE PLATE 1997-05-15 RIGAKU RAXIS II NI FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 SINGLE STRANDED DNA 2276.377 DNA (5'-D(*UP*UP*UP*UP*UP*UP*UP*U)-3') 1 syn polymer 51362.285 PROTEIN (NS3 PROTEIN) HELICASE DOMAIN N-TERMINAL MET, K221Q, A277G, S301L, S332P, S410A, G530E, R582W, AND A 10 RESIDUE (GSGSHHHHHH) HISTIDINE TAG ATTACHED TO THE C-TERMINUS 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 159 nat water no no (DU)(DU)(DU)(DU)(DU)(DU)(DU)(DU) UUUUUUUU B polydeoxyribonucleotide no yes MVDFIPVENLETTMRSPVFTDNSSPPAVPQSFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKA HGVDPNIRTGVRTITTGSPITYSTYGKFLADGG(CME)SGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLA TATPPGSVTVPHPNIEEVALSTTGEIPFYGKAIPLEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIP TSGDVVVVATDALMTGFTGDFDSVIDCNT(CME)VTQTVDFSLDPTFTIETTTLPQDAVSRTQRRGRTGRGKPGIYRFVA PGERPSGMFDSSVLCECYDAG(CME)AWYELTPAETTVRLRAYMNTPGLPVCQDHLEFWEGVFTGLTHIDAHFLSQTKQS GENFPYLVAYQATVCARAQAPPPSWDQMWKCLIRLKPTLHGPTPLLYRLGAVQNEVTLTHPITKYIMTCMSADLEVVTGS GSHHHHHH MVDFIPVENLETTMRSPVFTDNSSPPAVPQSFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKA HGVDPNIRTGVRTITTGSPITYSTYGKFLADGGCSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATATP PGSVTVPHPNIEEVALSTTGEIPFYGKAIPLEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGD VVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTLPQDAVSRTQRRGRTGRGKPGIYRFVAPGERPSGM FDSSVLCECYDAGCAWYELTPAETTVRLRAYMNTPGLPVCQDHLEFWEGVFTGLTHIDAHFLSQTKQSGENFPYLVAYQA TVCARAQAPPPSWDQMWKCLIRLKPTLHGPTPLLYRLGAVQNEVTLTHPITKYIMTCMSADLEVVTGSGSHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Hepacivirus Hepatitis C virus H sample NS3 11108 Hepatitis C virus (isolate H) CYTOPLASM 562 Escherichia coli JM109 PET-BS(+) 1 2.7 55 8.0 pH 8.0 PEG 6000 1 LI2SO4 1 2-MERCAPTOETHANOL 1 TRIS 1 PEG 6000 2 repository Initial release Version format compliance Version format compliance 1 0 1999-01-13 1 1 2008-05-22 1 2 2011-07-13 Y NDB 1997-12-17 REL SO4 SULFATE ION HOH water SYNTHETIC DEOXYOLIGONUCLEOTIDE sample SO4 1001 3 SO4 SO4 1001 A HOH 11 4 HOH HOH 11 B HOH 70 4 HOH HOH 70 B HOH 93 4 HOH HOH 93 B HOH 106 4 HOH HOH 106 B HOH 164 4 HOH HOH 164 B HOH 165 4 HOH HOH 165 B HOH 1 4 HOH HOH 1002 A HOH 2 4 HOH HOH 1003 A HOH 3 4 HOH HOH 1004 A HOH 4 4 HOH HOH 1005 A HOH 5 4 HOH HOH 1006 A HOH 6 4 HOH HOH 1007 A HOH 7 4 HOH HOH 1008 A HOH 8 4 HOH HOH 1009 A HOH 9 4 HOH HOH 1010 A HOH 10 4 HOH HOH 1011 A HOH 12 4 HOH HOH 1012 A HOH 13 4 HOH HOH 1013 A HOH 14 4 HOH HOH 1014 A HOH 15 4 HOH HOH 1015 A HOH 16 4 HOH HOH 1016 A HOH 17 4 HOH HOH 1017 A HOH 18 4 HOH HOH 1018 A HOH 19 4 HOH HOH 1019 A HOH 20 4 HOH HOH 1020 A HOH 21 4 HOH HOH 1021 A HOH 22 4 HOH HOH 1022 A HOH 23 4 HOH HOH 1023 A HOH 24 4 HOH HOH 1024 A HOH 25 4 HOH HOH 1025 A HOH 26 4 HOH HOH 1026 A HOH 27 4 HOH HOH 1027 A HOH 28 4 HOH HOH 1028 A HOH 29 4 HOH HOH 1029 A HOH 31 4 HOH HOH 1030 A HOH 32 4 HOH HOH 1031 A HOH 33 4 HOH HOH 1032 A HOH 35 4 HOH HOH 1033 A HOH 36 4 HOH HOH 1034 A HOH 37 4 HOH HOH 1035 A HOH 38 4 HOH HOH 1036 A HOH 39 4 HOH HOH 1037 A HOH 40 4 HOH HOH 1038 A HOH 41 4 HOH HOH 1039 A HOH 42 4 HOH HOH 1040 A HOH 43 4 HOH HOH 1041 A HOH 44 4 HOH HOH 1042 A HOH 45 4 HOH HOH 1043 A HOH 46 4 HOH HOH 1044 A HOH 47 4 HOH HOH 1045 A HOH 48 4 HOH HOH 1046 A HOH 49 4 HOH HOH 1047 A HOH 50 4 HOH HOH 1048 A HOH 51 4 HOH HOH 1049 A HOH 52 4 HOH HOH 1050 A HOH 53 4 HOH HOH 1051 A HOH 54 4 HOH HOH 1052 A HOH 55 4 HOH HOH 1053 A HOH 56 4 HOH HOH 1054 A HOH 57 4 HOH HOH 1055 A HOH 58 4 HOH HOH 1056 A HOH 59 4 HOH HOH 1057 A HOH 60 4 HOH HOH 1058 A HOH 61 4 HOH HOH 1059 A HOH 62 4 HOH HOH 1060 A HOH 63 4 HOH HOH 1061 A HOH 64 4 HOH HOH 1062 A HOH 65 4 HOH HOH 1063 A HOH 66 4 HOH HOH 1064 A HOH 67 4 HOH HOH 1065 A HOH 68 4 HOH HOH 1066 A HOH 69 4 HOH HOH 1067 A HOH 71 4 HOH HOH 1068 A HOH 72 4 HOH HOH 1069 A HOH 73 4 HOH HOH 1070 A HOH 74 4 HOH HOH 1071 A HOH 75 4 HOH HOH 1072 A HOH 76 4 HOH HOH 1073 A HOH 77 4 HOH HOH 1074 A HOH 78 4 HOH HOH 1075 A HOH 79 4 HOH HOH 1076 A HOH 80 4 HOH HOH 1077 A HOH 81 4 HOH HOH 1078 A HOH 82 4 HOH HOH 1079 A HOH 83 4 HOH HOH 1080 A HOH 85 4 HOH HOH 1081 A HOH 87 4 HOH HOH 1082 A HOH 88 4 HOH HOH 1083 A HOH 89 4 HOH HOH 1084 A HOH 90 4 HOH HOH 1085 A HOH 91 4 HOH HOH 1086 A HOH 92 4 HOH HOH 1087 A HOH 94 4 HOH HOH 1088 A HOH 95 4 HOH HOH 1089 A HOH 96 4 HOH HOH 1090 A HOH 97 4 HOH HOH 1091 A HOH 98 4 HOH HOH 1092 A HOH 99 4 HOH HOH 1093 A HOH 100 4 HOH HOH 1094 A HOH 101 4 HOH HOH 1095 A HOH 102 4 HOH HOH 1096 A HOH 103 4 HOH HOH 1097 A HOH 104 4 HOH HOH 1098 A HOH 105 4 HOH HOH 1099 A HOH 107 4 HOH HOH 1100 A HOH 108 4 HOH HOH 1101 A HOH 109 4 HOH HOH 1102 A HOH 110 4 HOH HOH 1103 A HOH 111 4 HOH HOH 1104 A HOH 112 4 HOH HOH 1105 A HOH 113 4 HOH HOH 1106 A HOH 115 4 HOH HOH 1107 A HOH 116 4 HOH HOH 1108 A HOH 117 4 HOH HOH 1109 A HOH 118 4 HOH HOH 1110 A HOH 119 4 HOH HOH 1111 A HOH 120 4 HOH HOH 1112 A HOH 121 4 HOH HOH 1113 A HOH 122 4 HOH HOH 1114 A HOH 123 4 HOH HOH 1115 A HOH 124 4 HOH HOH 1116 A HOH 125 4 HOH HOH 1117 A HOH 126 4 HOH HOH 1118 A HOH 128 4 HOH HOH 1119 A HOH 129 4 HOH HOH 1120 A HOH 130 4 HOH HOH 1121 A HOH 131 4 HOH HOH 1122 A HOH 132 4 HOH HOH 1123 A HOH 133 4 HOH HOH 1124 A HOH 134 4 HOH HOH 1125 A HOH 135 4 HOH HOH 1126 A HOH 136 4 HOH HOH 1127 A HOH 137 4 HOH HOH 1128 A HOH 139 4 HOH HOH 1129 A HOH 140 4 HOH HOH 1130 A HOH 141 4 HOH HOH 1131 A HOH 142 4 HOH HOH 1132 A HOH 143 4 HOH HOH 1133 A HOH 144 4 HOH HOH 1134 A HOH 145 4 HOH HOH 1135 A HOH 146 4 HOH HOH 1136 A HOH 147 4 HOH HOH 1137 A HOH 148 4 HOH HOH 1138 A HOH 149 4 HOH HOH 1139 A HOH 150 4 HOH HOH 1140 A HOH 151 4 HOH HOH 1141 A HOH 152 4 HOH HOH 1142 A HOH 153 4 HOH HOH 1143 A HOH 154 4 HOH HOH 1144 A HOH 155 4 HOH HOH 1145 A HOH 156 4 HOH HOH 1146 A HOH 157 4 HOH HOH 1147 A HOH 158 4 HOH HOH 1148 A HOH 159 4 HOH HOH 1149 A HOH 160 4 HOH HOH 1150 A HOH 161 4 HOH HOH 1151 A HOH 162 4 HOH HOH 1152 A HOH 163 4 HOH HOH 1153 A HOH 166 4 HOH HOH 1154 A U 2 n 1 DU 2 B U 3 n 2 DU 3 B U 4 n 3 DU 4 B U 5 n 4 DU 5 B U 6 n 5 DU 6 B U 7 n 6 DU 7 B U 8 n 7 DU 8 B n 8 9 B n 1 166 A n 2 167 A n 3 168 A n 4 169 A n 5 170 A n 6 171 A n 7 172 A n 8 173 A n 9 174 A n 10 175 A n 11 176 A n 12 177 A n 13 178 A n 14 179 A n 15 180 A n 16 181 A n 17 182 A n 18 183 A n 19 184 A n 20 185 A n 21 186 A n 22 187 A n 23 188 A n 24 189 A PRO 190 n 25 PRO 190 A PRO 191 n 26 PRO 191 A ALA 192 n 27 ALA 192 A VAL 193 n 28 VAL 193 A PRO 194 n 29 PRO 194 A GLN 195 n 30 GLN 195 A SER 196 n 31 SER 196 A PHE 197 n 32 PHE 197 A GLN 198 n 33 GLN 198 A VAL 199 n 34 VAL 199 A ALA 200 n 35 ALA 200 A HIS 201 n 36 HIS 201 A LEU 202 n 37 LEU 202 A HIS 203 n 38 HIS 203 A ALA 204 n 39 ALA 204 A PRO 205 n 40 PRO 205 A THR 206 n 41 THR 206 A GLY 207 n 42 GLY 207 A SER 208 n 43 SER 208 A GLY 209 n 44 GLY 209 A LYS 210 n 45 LYS 210 A SER 211 n 46 SER 211 A THR 212 n 47 THR 212 A LYS 213 n 48 LYS 213 A VAL 214 n 49 VAL 214 A PRO 215 n 50 PRO 215 A ALA 216 n 51 ALA 216 A ALA 217 n 52 ALA 217 A TYR 218 n 53 TYR 218 A ALA 219 n 54 ALA 219 A ALA 220 n 55 ALA 220 A GLN 221 n 56 GLN 221 A GLY 222 n 57 GLY 222 A TYR 223 n 58 TYR 223 A LYS 224 n 59 LYS 224 A VAL 225 n 60 VAL 225 A LEU 226 n 61 LEU 226 A VAL 227 n 62 VAL 227 A LEU 228 n 63 LEU 228 A ASN 229 n 64 ASN 229 A PRO 230 n 65 PRO 230 A SER 231 n 66 SER 231 A VAL 232 n 67 VAL 232 A ALA 233 n 68 ALA 233 A ALA 234 n 69 ALA 234 A THR 235 n 70 THR 235 A LEU 236 n 71 LEU 236 A GLY 237 n 72 GLY 237 A PHE 238 n 73 PHE 238 A GLY 239 n 74 GLY 239 A ALA 240 n 75 ALA 240 A TYR 241 n 76 TYR 241 A MET 242 n 77 MET 242 A SER 243 n 78 SER 243 A LYS 244 n 79 LYS 244 A ALA 245 n 80 ALA 245 A HIS 246 n 81 HIS 246 A GLY 247 n 82 GLY 247 A VAL 248 n 83 VAL 248 A ASP 249 n 84 ASP 249 A PRO 250 n 85 PRO 250 A ASN 251 n 86 ASN 251 A ILE 252 n 87 ILE 252 A ARG 253 n 88 ARG 253 A THR 254 n 89 THR 254 A GLY 255 n 90 GLY 255 A VAL 256 n 91 VAL 256 A ARG 257 n 92 ARG 257 A THR 258 n 93 THR 258 A ILE 259 n 94 ILE 259 A THR 260 n 95 THR 260 A THR 261 n 96 THR 261 A GLY 262 n 97 GLY 262 A SER 263 n 98 SER 263 A PRO 264 n 99 PRO 264 A ILE 265 n 100 ILE 265 A THR 266 n 101 THR 266 A TYR 267 n 102 TYR 267 A SER 268 n 103 SER 268 A THR 269 n 104 THR 269 A TYR 270 n 105 TYR 270 A GLY 271 n 106 GLY 271 A LYS 272 n 107 LYS 272 A PHE 273 n 108 PHE 273 A LEU 274 n 109 LEU 274 A ALA 275 n 110 ALA 275 A ASP 276 n 111 ASP 276 A GLY 277 n 112 GLY 277 A GLY 278 n 113 GLY 278 A CME 279 n 114 CME 279 A SER 280 n 115 SER 280 A GLY 281 n 116 GLY 281 A GLY 282 n 117 GLY 282 A ALA 283 n 118 ALA 283 A TYR 284 n 119 TYR 284 A ASP 285 n 120 ASP 285 A ILE 286 n 121 ILE 286 A ILE 287 n 122 ILE 287 A ILE 288 n 123 ILE 288 A CYS 289 n 124 CYS 289 A ASP 290 n 125 ASP 290 A GLU 291 n 126 GLU 291 A CYS 292 n 127 CYS 292 A HIS 293 n 128 HIS 293 A SER 294 n 129 SER 294 A THR 295 n 130 THR 295 A ASP 296 n 131 ASP 296 A ALA 297 n 132 ALA 297 A THR 298 n 133 THR 298 A SER 299 n 134 SER 299 A ILE 300 n 135 ILE 300 A LEU 301 n 136 LEU 301 A GLY 302 n 137 GLY 302 A ILE 303 n 138 ILE 303 A GLY 304 n 139 GLY 304 A THR 305 n 140 THR 305 A VAL 306 n 141 VAL 306 A LEU 307 n 142 LEU 307 A ASP 308 n 143 ASP 308 A GLN 309 n 144 GLN 309 A ALA 310 n 145 ALA 310 A GLU 311 n 146 GLU 311 A THR 312 n 147 THR 312 A ALA 313 n 148 ALA 313 A GLY 314 n 149 GLY 314 A ALA 315 n 150 ALA 315 A ARG 316 n 151 ARG 316 A LEU 317 n 152 LEU 317 A VAL 318 n 153 VAL 318 A VAL 319 n 154 VAL 319 A LEU 320 n 155 LEU 320 A ALA 321 n 156 ALA 321 A THR 322 n 157 THR 322 A ALA 323 n 158 ALA 323 A THR 324 n 159 THR 324 A PRO 325 n 160 PRO 325 A PRO 326 n 161 PRO 326 A GLY 327 n 162 GLY 327 A SER 328 n 163 SER 328 A VAL 329 n 164 VAL 329 A THR 330 n 165 THR 330 A VAL 331 n 166 VAL 331 A PRO 332 n 167 PRO 332 A HIS 333 n 168 HIS 333 A PRO 334 n 169 PRO 334 A ASN 335 n 170 ASN 335 A ILE 336 n 171 ILE 336 A GLU 337 n 172 GLU 337 A GLU 338 n 173 GLU 338 A VAL 339 n 174 VAL 339 A ALA 340 n 175 ALA 340 A LEU 341 n 176 LEU 341 A SER 342 n 177 SER 342 A THR 343 n 178 THR 343 A THR 344 n 179 THR 344 A GLY 345 n 180 GLY 345 A GLU 346 n 181 GLU 346 A ILE 347 n 182 ILE 347 A PRO 348 n 183 PRO 348 A PHE 349 n 184 PHE 349 A TYR 350 n 185 TYR 350 A GLY 351 n 186 GLY 351 A LYS 352 n 187 LYS 352 A ALA 353 n 188 ALA 353 A ILE 354 n 189 ILE 354 A PRO 355 n 190 PRO 355 A LEU 356 n 191 LEU 356 A GLU 357 n 192 GLU 357 A VAL 358 n 193 VAL 358 A ILE 359 n 194 ILE 359 A LYS 360 n 195 LYS 360 A GLY 361 n 196 GLY 361 A GLY 362 n 197 GLY 362 A ARG 363 n 198 ARG 363 A HIS 364 n 199 HIS 364 A LEU 365 n 200 LEU 365 A ILE 366 n 201 ILE 366 A PHE 367 n 202 PHE 367 A CYS 368 n 203 CYS 368 A HIS 369 n 204 HIS 369 A SER 370 n 205 SER 370 A LYS 371 n 206 LYS 371 A LYS 372 n 207 LYS 372 A LYS 373 n 208 LYS 373 A CYS 374 n 209 CYS 374 A ASP 375 n 210 ASP 375 A GLU 376 n 211 GLU 376 A LEU 377 n 212 LEU 377 A ALA 378 n 213 ALA 378 A ALA 379 n 214 ALA 379 A LYS 380 n 215 LYS 380 A LEU 381 n 216 LEU 381 A VAL 382 n 217 VAL 382 A ALA 383 n 218 ALA 383 A LEU 384 n 219 LEU 384 A GLY 385 n 220 GLY 385 A ILE 386 n 221 ILE 386 A ASN 387 n 222 ASN 387 A ALA 388 n 223 ALA 388 A VAL 389 n 224 VAL 389 A ALA 390 n 225 ALA 390 A TYR 391 n 226 TYR 391 A TYR 392 n 227 TYR 392 A ARG 393 n 228 ARG 393 A GLY 394 n 229 GLY 394 A LEU 395 n 230 LEU 395 A ASP 396 n 231 ASP 396 A VAL 397 n 232 VAL 397 A SER 398 n 233 SER 398 A VAL 399 n 234 VAL 399 A ILE 400 n 235 ILE 400 A PRO 401 n 236 PRO 401 A THR 402 n 237 THR 402 A SER 403 n 238 SER 403 A GLY 404 n 239 GLY 404 A ASP 405 n 240 ASP 405 A VAL 406 n 241 VAL 406 A VAL 407 n 242 VAL 407 A VAL 408 n 243 VAL 408 A VAL 409 n 244 VAL 409 A ALA 410 n 245 ALA 410 A THR 411 n 246 THR 411 A ASP 412 n 247 ASP 412 A ALA 413 n 248 ALA 413 A LEU 414 n 249 LEU 414 A n 250 415 A n 251 416 A n 252 417 A PHE 418 n 253 PHE 418 A THR 419 n 254 THR 419 A GLY 420 n 255 GLY 420 A ASP 421 n 256 ASP 421 A PHE 422 n 257 PHE 422 A ASP 423 n 258 ASP 423 A SER 424 n 259 SER 424 A VAL 425 n 260 VAL 425 A ILE 426 n 261 ILE 426 A ASP 427 n 262 ASP 427 A CYS 428 n 263 CYS 428 A ASN 429 n 264 ASN 429 A THR 430 n 265 THR 430 A CME 431 n 266 CME 431 A VAL 432 n 267 VAL 432 A THR 433 n 268 THR 433 A GLN 434 n 269 GLN 434 A THR 435 n 270 THR 435 A VAL 436 n 271 VAL 436 A ASP 437 n 272 ASP 437 A PHE 438 n 273 PHE 438 A SER 439 n 274 SER 439 A LEU 440 n 275 LEU 440 A ASP 441 n 276 ASP 441 A PRO 442 n 277 PRO 442 A THR 443 n 278 THR 443 A PHE 444 n 279 PHE 444 A THR 445 n 280 THR 445 A ILE 446 n 281 ILE 446 A GLU 447 n 282 GLU 447 A THR 448 n 283 THR 448 A THR 449 n 284 THR 449 A THR 450 n 285 THR 450 A LEU 451 n 286 LEU 451 A PRO 452 n 287 PRO 452 A GLN 453 n 288 GLN 453 A ASP 454 n 289 ASP 454 A ALA 455 n 290 ALA 455 A VAL 456 n 291 VAL 456 A SER 457 n 292 SER 457 A ARG 458 n 293 ARG 458 A THR 459 n 294 THR 459 A GLN 460 n 295 GLN 460 A ARG 461 n 296 ARG 461 A ARG 462 n 297 ARG 462 A GLY 463 n 298 GLY 463 A ARG 464 n 299 ARG 464 A THR 465 n 300 THR 465 A GLY 466 n 301 GLY 466 A ARG 467 n 302 ARG 467 A GLY 468 n 303 GLY 468 A LYS 469 n 304 LYS 469 A PRO 470 n 305 PRO 470 A GLY 471 n 306 GLY 471 A ILE 472 n 307 ILE 472 A TYR 473 n 308 TYR 473 A ARG 474 n 309 ARG 474 A PHE 475 n 310 PHE 475 A VAL 476 n 311 VAL 476 A ALA 477 n 312 ALA 477 A PRO 478 n 313 PRO 478 A GLY 479 n 314 GLY 479 A GLU 480 n 315 GLU 480 A ARG 481 n 316 ARG 481 A PRO 482 n 317 PRO 482 A SER 483 n 318 SER 483 A GLY 484 n 319 GLY 484 A MET 485 n 320 MET 485 A PHE 486 n 321 PHE 486 A ASP 487 n 322 ASP 487 A SER 488 n 323 SER 488 A SER 489 n 324 SER 489 A VAL 490 n 325 VAL 490 A LEU 491 n 326 LEU 491 A CYS 492 n 327 CYS 492 A GLU 493 n 328 GLU 493 A CYS 494 n 329 CYS 494 A TYR 495 n 330 TYR 495 A ASP 496 n 331 ASP 496 A ALA 497 n 332 ALA 497 A GLY 498 n 333 GLY 498 A CME 499 n 334 CME 499 A ALA 500 n 335 ALA 500 A TRP 501 n 336 TRP 501 A TYR 502 n 337 TYR 502 A GLU 503 n 338 GLU 503 A LEU 504 n 339 LEU 504 A THR 505 n 340 THR 505 A PRO 506 n 341 PRO 506 A ALA 507 n 342 ALA 507 A GLU 508 n 343 GLU 508 A THR 509 n 344 THR 509 A THR 510 n 345 THR 510 A VAL 511 n 346 VAL 511 A ARG 512 n 347 ARG 512 A LEU 513 n 348 LEU 513 A ARG 514 n 349 ARG 514 A ALA 515 n 350 ALA 515 A TYR 516 n 351 TYR 516 A MET 517 n 352 MET 517 A ASN 518 n 353 ASN 518 A THR 519 n 354 THR 519 A PRO 520 n 355 PRO 520 A GLY 521 n 356 GLY 521 A LEU 522 n 357 LEU 522 A PRO 523 n 358 PRO 523 A VAL 524 n 359 VAL 524 A CYS 525 n 360 CYS 525 A GLN 526 n 361 GLN 526 A ASP 527 n 362 ASP 527 A HIS 528 n 363 HIS 528 A LEU 529 n 364 LEU 529 A GLU 530 n 365 GLU 530 A PHE 531 n 366 PHE 531 A TRP 532 n 367 TRP 532 A GLU 533 n 368 GLU 533 A GLY 534 n 369 GLY 534 A VAL 535 n 370 VAL 535 A PHE 536 n 371 PHE 536 A THR 537 n 372 THR 537 A GLY 538 n 373 GLY 538 A LEU 539 n 374 LEU 539 A THR 540 n 375 THR 540 A HIS 541 n 376 HIS 541 A ILE 542 n 377 ILE 542 A ASP 543 n 378 ASP 543 A ALA 544 n 379 ALA 544 A HIS 545 n 380 HIS 545 A PHE 546 n 381 PHE 546 A LEU 547 n 382 LEU 547 A SER 548 n 383 SER 548 A GLN 549 n 384 GLN 549 A THR 550 n 385 THR 550 A LYS 551 n 386 LYS 551 A GLN 552 n 387 GLN 552 A SER 553 n 388 SER 553 A GLY 554 n 389 GLY 554 A GLU 555 n 390 GLU 555 A ASN 556 n 391 ASN 556 A PHE 557 n 392 PHE 557 A PRO 558 n 393 PRO 558 A TYR 559 n 394 TYR 559 A LEU 560 n 395 LEU 560 A VAL 561 n 396 VAL 561 A ALA 562 n 397 ALA 562 A TYR 563 n 398 TYR 563 A GLN 564 n 399 GLN 564 A ALA 565 n 400 ALA 565 A THR 566 n 401 THR 566 A VAL 567 n 402 VAL 567 A CYS 568 n 403 CYS 568 A ALA 569 n 404 ALA 569 A ARG 570 n 405 ARG 570 A ALA 571 n 406 ALA 571 A GLN 572 n 407 GLN 572 A ALA 573 n 408 ALA 573 A PRO 574 n 409 PRO 574 A PRO 575 n 410 PRO 575 A PRO 576 n 411 PRO 576 A SER 577 n 412 SER 577 A TRP 578 n 413 TRP 578 A ASP 579 n 414 ASP 579 A GLN 580 n 415 GLN 580 A MET 581 n 416 MET 581 A TRP 582 n 417 TRP 582 A LYS 583 n 418 LYS 583 A CYS 584 n 419 CYS 584 A LEU 585 n 420 LEU 585 A ILE 586 n 421 ILE 586 A ARG 587 n 422 ARG 587 A LEU 588 n 423 LEU 588 A LYS 589 n 424 LYS 589 A PRO 590 n 425 PRO 590 A THR 591 n 426 THR 591 A LEU 592 n 427 LEU 592 A HIS 593 n 428 HIS 593 A GLY 594 n 429 GLY 594 A PRO 595 n 430 PRO 595 A THR 596 n 431 THR 596 A PRO 597 n 432 PRO 597 A LEU 598 n 433 LEU 598 A LEU 599 n 434 LEU 599 A TYR 600 n 435 TYR 600 A ARG 601 n 436 ARG 601 A LEU 602 n 437 LEU 602 A GLY 603 n 438 GLY 603 A ALA 604 n 439 ALA 604 A VAL 605 n 440 VAL 605 A GLN 606 n 441 GLN 606 A ASN 607 n 442 ASN 607 A GLU 608 n 443 GLU 608 A VAL 609 n 444 VAL 609 A THR 610 n 445 THR 610 A LEU 611 n 446 LEU 611 A THR 612 n 447 THR 612 A HIS 613 n 448 HIS 613 A PRO 614 n 449 PRO 614 A ILE 615 n 450 ILE 615 A THR 616 n 451 THR 616 A LYS 617 n 452 LYS 617 A TYR 618 n 453 TYR 618 A ILE 619 n 454 ILE 619 A MET 620 n 455 MET 620 A THR 621 n 456 THR 621 A CYS 622 n 457 CYS 622 A MET 623 n 458 MET 623 A SER 624 n 459 SER 624 A n 460 625 A n 461 626 A n 462 627 A n 463 628 A n 464 629 A n 465 630 A n 466 631 A n 467 632 A n 468 633 A n 469 634 A n 470 635 A n 471 636 A n 472 637 A n 473 638 A n 474 639 A n 475 640 A n 476 641 A author_defined_assembly 2 dimeric A CME 279 S,S-(2-HYDROXYETHYL)THIOCYSTEINE B CME 114 CYS A CME 431 S,S-(2-HYDROXYETHYL)THIOCYSTEINE B CME 266 CYS A CME 499 S,S-(2-HYDROXYETHYL)THIOCYSTEINE B CME 334 CYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 198 B O GLN 33 A N VAL 318 B N VAL 153 A O LEU 317 B O LEU 152 A N ILE 287 B N ILE 122 A O ILE 286 B O ILE 121 A N LEU 226 B N LEU 61 A O VAL 225 B O VAL 60 A N THR 266 B N THR 101 A O TYR 267 B O TYR 102 A N ASN 251 B N ASN 86 A O ILE 347 B O ILE 182 A N ILE 354 B N ILE 189 A O HIS 364 B O HIS 199 A N VAL 406 B N VAL 241 A O VAL 407 B O VAL 242 A N VAL 389 B N VAL 224 A O VAL 425 B O VAL 260 A N ILE 472 B N ILE 307 A O THR 433 B O THR 268 A N THR 449 B N THR 284 1 B O5' DU 2 A O5' DU 1 1 Y 1 B C5' DU 2 A C5' DU 1 1 Y 1 B C4' DU 2 A C4' DU 1 1 Y 1 B O4' DU 2 A O4' DU 1 1 Y 1 B C3' DU 2 A C3' DU 1 1 Y 1 B C2' DU 2 A C2' DU 1 1 Y 1 B C1' DU 2 A C1' DU 1 1 Y 1 B N1 DU 2 A N1 DU 1 1 Y 1 B C2 DU 2 A C2 DU 1 1 Y 1 B O2 DU 2 A O2 DU 1 1 Y 1 B N3 DU 2 A N3 DU 1 1 Y 1 B C4 DU 2 A C4 DU 1 1 Y 1 B O4 DU 2 A O4 DU 1 1 Y 1 B C5 DU 2 A C5 DU 1 1 Y 1 B C6 DU 2 A C6 DU 1 1 Y 1 B N1 DU 3 A N1 DU 2 1 Y 1 B C2 DU 3 A C2 DU 2 1 Y 1 B O2 DU 3 A O2 DU 2 1 Y 1 B N3 DU 3 A N3 DU 2 1 Y 1 B C4 DU 3 A C4 DU 2 1 Y 1 B O4 DU 3 A O4 DU 2 1 Y 1 B C5 DU 3 A C5 DU 2 1 Y 1 B C6 DU 3 A C6 DU 2 1 Y 1 A CG GLN 195 B CG GLN 30 1 Y 1 A CD GLN 195 B CD GLN 30 1 Y 1 A OE1 GLN 195 B OE1 GLN 30 1 Y 1 A NE2 GLN 195 B NE2 GLN 30 1 Y 1 A CG LYS 244 B CG LYS 79 1 Y 1 A CD LYS 244 B CD LYS 79 1 Y 1 A CE LYS 244 B CE LYS 79 1 Y 1 A NZ LYS 244 B NZ LYS 79 1 Y 1 A CG GLU 357 B CG GLU 192 1 Y 1 A CD GLU 357 B CD GLU 192 1 Y 1 A OE1 GLU 357 B OE1 GLU 192 1 Y 1 A OE2 GLU 357 B OE2 GLU 192 1 Y 1 A CG LYS 360 B CG LYS 195 1 Y 1 A CD LYS 360 B CD LYS 195 1 Y 1 A CE LYS 360 B CE LYS 195 1 Y 1 A NZ LYS 360 B NZ LYS 195 1 Y 1 A CE LYS 372 B CE LYS 207 1 Y 1 A NZ LYS 372 B NZ LYS 207 1 Y 1 A CG GLU 530 B CG GLU 365 1 Y 1 A CD GLU 530 B CD GLU 365 1 Y 1 A OE1 GLU 530 B OE1 GLU 365 1 Y 1 A OE2 GLU 530 B OE2 GLU 365 1 Y 1 A CG HIS 541 B CG HIS 376 1 Y 1 A ND1 HIS 541 B ND1 HIS 376 1 Y 1 A CD2 HIS 541 B CD2 HIS 376 1 Y 1 A CE1 HIS 541 B CE1 HIS 376 1 Y 1 A NE2 HIS 541 B NE2 HIS 376 1 Y 1 A CG GLN 580 B CG GLN 415 1 Y 1 A CD GLN 580 B CD GLN 415 1 Y 1 A OE1 GLN 580 B OE1 GLN 415 1 Y 1 A NE2 GLN 580 B NE2 GLN 415 1 Y 1 A CG LYS 583 B CG LYS 418 1 Y 1 A CD LYS 583 B CD LYS 418 1 Y 1 A CE LYS 583 B CE LYS 418 1 Y 1 A NZ LYS 583 B NZ LYS 418 1 Y 1 A CG ARG 587 B CG ARG 422 1 Y 1 A CD ARG 587 B CD ARG 422 1 Y 1 A NE ARG 587 B NE ARG 422 1 Y 1 A CZ ARG 587 B CZ ARG 422 1 Y 1 A NH1 ARG 587 B NH1 ARG 422 1 Y 1 A NH2 ARG 587 B NH2 ARG 422 1 Y 1 B DU 9 A DU 8 1 Y 1 A MET 166 B MET 1 1 Y 1 A VAL 167 B VAL 2 1 Y 1 A ASP 168 B ASP 3 1 Y 1 A PHE 169 B PHE 4 1 Y 1 A ILE 170 B ILE 5 1 Y 1 A PRO 171 B PRO 6 1 Y 1 A VAL 172 B VAL 7 1 Y 1 A GLU 173 B GLU 8 1 Y 1 A ASN 174 B ASN 9 1 Y 1 A LEU 175 B LEU 10 1 Y 1 A GLU 176 B GLU 11 1 Y 1 A THR 177 B THR 12 1 Y 1 A THR 178 B THR 13 1 Y 1 A MET 179 B MET 14 1 Y 1 A ARG 180 B ARG 15 1 Y 1 A SER 181 B SER 16 1 Y 1 A PRO 182 B PRO 17 1 Y 1 A VAL 183 B VAL 18 1 Y 1 A PHE 184 B PHE 19 1 Y 1 A THR 185 B THR 20 1 Y 1 A ASP 186 B ASP 21 1 Y 1 A ASN 187 B ASN 22 1 Y 1 A SER 188 B SER 23 1 Y 1 A SER 189 B SER 24 1 Y 1 A MET 415 B MET 250 1 Y 1 A THR 416 B THR 251 1 Y 1 A GLY 417 B GLY 252 1 Y 1 A ALA 625 B ALA 460 1 Y 1 A ASP 626 B ASP 461 1 Y 1 A LEU 627 B LEU 462 1 Y 1 A GLU 628 B GLU 463 1 Y 1 A VAL 629 B VAL 464 1 Y 1 A VAL 630 B VAL 465 1 Y 1 A THR 631 B THR 466 1 Y 1 A GLY 632 B GLY 467 1 Y 1 A SER 633 B SER 468 1 Y 1 A GLY 634 B GLY 469 1 Y 1 A SER 635 B SER 470 1 Y 1 A HIS 636 B HIS 471 1 Y 1 A HIS 637 B HIS 472 1 Y 1 A HIS 638 B HIS 473 1 Y 1 A HIS 639 B HIS 474 1 Y 1 A HIS 640 B HIS 475 1 Y 1 A HIS 641 B HIS 476 1 Y 1 A A HH12 H1 ARG HOH 512 1053 1.28 1 A A HH11 H2 ARG HOH 474 1015 1.31 1 A A HZ3 H1 LYS HOH 469 1147 1.32 1 B B OP1 H2 DU HOH 7 11 1.55 1 A A H1 O HOH HOH 1051 1098 1.59 1 A THR 212 -142.05 -60.76 1 A CYS 292 -62.68 2.48 1 A THR 322 -171.56 145.64 1 A SER 342 -117.94 -165.74 1 A LYS 352 -105.53 -158.92 1 A VAL 406 -172.62 147.90 1 A THR 443 -124.78 -87.41 1 A GLU 447 -134.47 -151.76 1 A ASP 527 -68.68 85.39 1 A LYS 589 -26.74 -51.38 PARHCSDX.PRO TOPHCSDX.PRO PARAM19.SOL DNA-RNA.TOP DNA-RNA.PARAM TOPH19.SOL 29.1 0.2870000 0.006 0.2280000 0.2280000 2.2 6.0 2323 25780 8.6 95.7 RANDOM 1 RESTRAINED THROUGHOUT 2.0 MIR 6.0 2.2 6.0 159 3491 5 107 3220 0.007 1.41 24.1 1.33 1.10 1.5 1.85 2.0 1.78 2.0 2.71 2.5 0.2930000 0.019 0.2780000 2.27 227 1748 10 8.5 90.2 2.1 35 1A1V 31255 -1 0.0410000 0.0410000 1 29.7 3.2 95.5 0.3550000 2.10 2.18 5.9 0.1380000 2.5 81.7 phasing PHASES refinement X-PLOR 3.843 data reduction DENZO data scaling SCALEPACK NS3 PROTEIN/DNA COMPLEX HEPATITIS C VIRUS NS3 HELICASE DOMAIN COMPLEXED WITH SINGLE STRANDED SDNA 1 N N 2 N N 3 N N 4 N N 4 N N A LYS 213 B LYS 48 HELX_P A GLN 221 B GLN 56 1 1 9 A VAL 232 B VAL 67 HELX_P A HIS 246 B HIS 81 1 2 15 A TYR 270 B TYR 105 HELX_P A ALA 275 B ALA 110 1 3 6 A ALA 297 B ALA 132 HELX_P A GLN 309 B GLN 144 1 4 13 A LEU 356 B LEU 191 HELX_P A LYS 360 B LYS 195 5 5 5 A LYS 371 B LYS 206 HELX_P A ALA 383 B ALA 218 1 6 13 A VAL 397 B VAL 232 HELX_P A VAL 399 B VAL 234 5 7 3 A ALA 455 B ALA 290 HELX_P A ARG 464 B ARG 299 1 8 10 A SER 488 B SER 323 HELX_P A ALA 500 B ALA 335 1 9 13 A PRO 506 B PRO 341 HELX_P A ASN 518 B ASN 353 1 10 13 A LEU 529 B LEU 364 HELX_P A GLY 538 B GLY 373 1 11 10 A ALA 544 B ALA 379 HELX_P A GLN 552 B GLN 387 1 12 9 A PRO 558 B PRO 393 HELX_P A ALA 571 B ALA 406 1 13 14 A GLN 580 B GLN 415 HELX_P A LEU 585 B LEU 420 5 14 6 A LYS 589 B LYS 424 HELX_P A THR 591 B THR 426 5 15 3 A PRO 614 B PRO 449 HELX_P A CYS 622 B CYS 457 1 16 9 covale 1.324 A CME 279 B N CME 114 1_555 A GLY 278 B C GLY 113 1_555 covale 1.326 A CME 279 B C CME 114 1_555 A SER 280 B N SER 115 1_555 covale 1.325 A CME 431 B N CME 266 1_555 A THR 430 B C THR 265 1_555 covale 1.323 A CME 431 B C CME 266 1_555 A VAL 432 B N VAL 267 1_555 covale 1.327 A CME 499 B N CME 334 1_555 A GLY 498 B C GLY 333 1_555 covale 1.328 A CME 499 B C CME 334 1_555 A ALA 500 B N ALA 335 1_555 HYDROLASE/DNA HEPATITIS C VIRUS, RNA HELICASE, NONSTRUCTURAL PROTEINS, SINGLE-STRANDED DNA, HYDROLASE-DNA COMPLEX A ASP 441 B ASP 276 1 A PRO 442 B PRO 277 0.45 POLG_HCVH UNP 2 P27958 1A1V PDB 1 1A1V 1193 1657 1A1V 167 631 P27958 A 1 2 466 2 9 1A1V 2 9 1A1V B 2 1 8 1 VAL CONFLICT ALA 192 1A1V A P27958 UNP 1218 27 1 ILE CONFLICT VAL 248 1A1V A P27958 UNP 1274 83 1 CYS MODIFIED RESIDUE CME 279 1A1V A P27958 UNP 1305 114 1 TYR CONFLICT PHE 418 1A1V A P27958 UNP 1444 253 1 CYS MODIFIED RESIDUE CME 431 1A1V A P27958 UNP 1457 266 1 ILE CONFLICT THR 449 1A1V A P27958 UNP 1475 284 1 CYS MODIFIED RESIDUE CME 499 1A1V A P27958 UNP 1525 334 1 LEU CONFLICT PHE 557 1A1V A P27958 UNP 1583 392 1 ILE CONFLICT VAL 609 1A1V A P27958 UNP 1635 444 1 VAL CONFLICT ILE 615 1A1V A P27958 UNP 1641 450 6 2 3 2 2 parallel parallel parallel parallel parallel anti-parallel parallel parallel parallel anti-parallel A GLN 198 B GLN 33 A HIS 203 B HIS 38 A LEU 317 B LEU 152 A THR 322 B THR 157 A ILE 286 B ILE 121 A ASP 290 B ASP 125 A VAL 225 B VAL 60 A ASN 229 B ASN 64 A ILE 265 B ILE 100 A THR 269 B THR 104 A ASN 251 B ASN 86 A ARG 253 B ARG 88 A ILE 347 B ILE 182 A PHE 349 B PHE 184 A LYS 352 B LYS 187 A ILE 354 B ILE 189 A ARG 363 B ARG 198 A PHE 367 B PHE 202 A VAL 406 B VAL 241 A ALA 410 B ALA 245 A ALA 388 B ALA 223 A TYR 391 B TYR 226 A SER 424 B SER 259 A ASP 427 B ASP 262 A ILE 472 B ILE 307 A PHE 475 B PHE 310 A THR 433 B THR 268 A ASP 437 B ASP 272 A THR 445 B THR 280 A THR 449 B THR 284 BINDING SITE FOR RESIDUE SO4 A 1001 Software 9 A PRO 205 B PRO 40 9 1_555 A THR 206 B THR 41 9 1_555 A GLY 207 B GLY 42 9 1_555 A SER 208 B SER 43 9 1_555 A GLY 209 B GLY 44 9 1_555 A LYS 210 B LYS 45 9 1_555 A SER 211 B SER 46 9 1_555 A HOH 1062 E HOH 9 1_555 A HOH 1070 E HOH 9 1_555 18 orthorhombic P 21 21 2