0.016554 0.000000 0.000000 0.000000 0.016554 0.000000 0.000000 0.000000 0.016548 0.00000 0.00000 0.00000 Worthylake, D.K. Wang, H. Yoo, S. Sundquist, W.I. Hill, C.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 60.410 60.410 60.430 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 55 85 92 10.1107/S0907444998007689 10089398 Structures of the HIV-1 capsid protein dimerization domain at 2.6 A resolution. 1999 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 300 1 MIRRORS IMAGE PLATE 1997-09 MARRESEARCH M x-ray 1 1.0 1.0 X8C NSLS 1.0 SYNCHROTRON NSLS BEAMLINE X8C 9662.116 HIV-1 CAPSID C-TERMINAL DOMAIN OF HIV-1 CAPSID PROTEIN RESIDUES 146-231 (CAPSID NUMBERING) 1 man polymer 18.015 water 28 nat water no no MSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGP GHKARVL MSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGP GHKARVL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia Escherichia coli sample BL21 11676 Human immunodeficiency virus 1 469008 Escherichia coli BL21(DE3) BL21 (DE3) BL21 1 2.85 56.86 5.0 pH 5.0 repository Initial release Version format compliance Version format compliance 1 0 1999-02-09 1 1 2008-03-24 1 2 2011-07-13 Y BNL 1998-02-10 REL REL HOH water HOH 401 2 HOH HOH 401 A HOH 402 2 HOH HOH 402 A HOH 403 2 HOH HOH 403 A HOH 404 2 HOH HOH 404 A HOH 405 2 HOH HOH 405 A HOH 406 2 HOH HOH 406 A HOH 407 2 HOH HOH 407 A HOH 408 2 HOH HOH 408 A HOH 409 2 HOH HOH 409 A HOH 410 2 HOH HOH 410 A HOH 411 2 HOH HOH 411 A HOH 412 2 HOH HOH 412 A HOH 413 2 HOH HOH 413 A HOH 414 2 HOH HOH 414 A HOH 415 2 HOH HOH 415 A HOH 416 2 HOH HOH 416 A HOH 417 2 HOH HOH 417 A HOH 418 2 HOH HOH 418 A HOH 419 2 HOH HOH 419 A HOH 420 2 HOH HOH 420 A HOH 421 2 HOH HOH 421 A HOH 422 2 HOH HOH 422 A HOH 423 2 HOH HOH 423 A HOH 424 2 HOH HOH 424 A HOH 425 2 HOH HOH 425 A HOH 426 2 HOH HOH 426 A HOH 427 2 HOH HOH 427 A HOH 428 2 HOH HOH 428 A n 1 145 A n 2 146 A n 3 147 A THR 148 n 4 THR 148 A SER 149 n 5 SER 149 A ILE 150 n 6 ILE 150 A LEU 151 n 7 LEU 151 A ASP 152 n 8 ASP 152 A ILE 153 n 9 ILE 153 A ARG 154 n 10 ARG 154 A GLN 155 n 11 GLN 155 A GLY 156 n 12 GLY 156 A PRO 157 n 13 PRO 157 A LYS 158 n 14 LYS 158 A GLU 159 n 15 GLU 159 A PRO 160 n 16 PRO 160 A PHE 161 n 17 PHE 161 A ARG 162 n 18 ARG 162 A ASP 163 n 19 ASP 163 A TYR 164 n 20 TYR 164 A VAL 165 n 21 VAL 165 A ASP 166 n 22 ASP 166 A ARG 167 n 23 ARG 167 A PHE 168 n 24 PHE 168 A TYR 169 n 25 TYR 169 A LYS 170 n 26 LYS 170 A THR 171 n 27 THR 171 A LEU 172 n 28 LEU 172 A ARG 173 n 29 ARG 173 A ALA 174 n 30 ALA 174 A GLU 175 n 31 GLU 175 A GLN 176 n 32 GLN 176 A ALA 177 n 33 ALA 177 A SER 178 n 34 SER 178 A GLN 179 n 35 GLN 179 A GLU 180 n 36 GLU 180 A VAL 181 n 37 VAL 181 A LYS 182 n 38 LYS 182 A ASN 183 n 39 ASN 183 A TRP 184 n 40 TRP 184 A MET 185 n 41 MET 185 A THR 186 n 42 THR 186 A GLU 187 n 43 GLU 187 A THR 188 n 44 THR 188 A LEU 189 n 45 LEU 189 A LEU 190 n 46 LEU 190 A VAL 191 n 47 VAL 191 A GLN 192 n 48 GLN 192 A ASN 193 n 49 ASN 193 A ALA 194 n 50 ALA 194 A ASN 195 n 51 ASN 195 A PRO 196 n 52 PRO 196 A ASP 197 n 53 ASP 197 A CYS 198 n 54 CYS 198 A LYS 199 n 55 LYS 199 A THR 200 n 56 THR 200 A ILE 201 n 57 ILE 201 A LEU 202 n 58 LEU 202 A LYS 203 n 59 LYS 203 A ALA 204 n 60 ALA 204 A LEU 205 n 61 LEU 205 A GLY 206 n 62 GLY 206 A PRO 207 n 63 PRO 207 A GLY 208 n 64 GLY 208 A ALA 209 n 65 ALA 209 A THR 210 n 66 THR 210 A LEU 211 n 67 LEU 211 A GLU 212 n 68 GLU 212 A GLU 213 n 69 GLU 213 A MET 214 n 70 MET 214 A MET 215 n 71 MET 215 A THR 216 n 72 THR 216 A ALA 217 n 73 ALA 217 A CYS 218 n 74 CYS 218 A GLN 219 n 75 GLN 219 A n 76 220 A n 77 221 A n 78 222 A n 79 223 A n 80 224 A n 81 225 A n 82 226 A n 83 227 A n 84 228 A n 85 229 A n 86 230 A n 87 231 A author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 6_665 -x+1,-y+1,z crystal symmetry operation 60.4100000000 60.4100000000 0.0000000000 1 A MET 145 A MET 1 1 Y 1 A SER 146 A SER 2 1 Y 1 A PRO 147 A PRO 3 1 Y 1 A GLY 220 A GLY 76 1 Y 1 A VAL 221 A VAL 77 1 Y 1 A GLY 222 A GLY 78 1 Y 1 A GLY 223 A GLY 79 1 Y 1 A PRO 224 A PRO 80 1 Y 1 A GLY 225 A GLY 81 1 Y 1 A HIS 226 A HIS 82 1 Y 1 A LYS 227 A LYS 83 1 Y 1 A ALA 228 A ALA 84 1 Y 1 A ARG 229 A ARG 85 1 Y 1 A VAL 230 A VAL 86 1 Y 1 A LEU 231 A LEU 87 1 Y 1 A THR 188 -116.91 -83.55 PARHCSDX.PRO TOPHCSDX.PRO TIP3P.PARAMETER TIP3P.TOPOLOGY 71.0 0.00 0.00 0.00 0.00 0.00 0.00 BULK SOLVENT MODEL USED 0.281 0.016 0.223 0.223 2.60 20.00 303 3102 9.8 91.8 RANDOM 10000000.00 0.00100 1 RESTRAINED THROUGHOUT 0.0 0.39 0.35 20.0 0.60 0.50 2.60 20.00 28 601 0 0 573 0.009 1.2 21.2 1.15 2.67 1.50 4.44 2.00 4.34 2.00 7.02 2.50 0.521 0.069 0.377 2.76 57 500 6 10.2 99.8 59.6 2.6 20.0 1A43 3102 0 1 data reduction DENZO data scaling SCALEPACK model building X-PLOR 3.843 refinement X-PLOR 3.843 phasing X-PLOR 3.843 HIV-1 CAPSID STRUCTURE OF THE HIV-1 CAPSID PROTEIN DIMERIZATION DOMAIN AT 2.6A RESOLUTION 1 N N 2 N N A ILE 150 A ILE 6 HELX_P A ASP 152 A ASP 8 5 1 3 A PHE 161 A PHE 17 HELX_P A ALA 174 A ALA 30 1 2 14 A GLN 179 A GLN 35 HELX_P A GLU 187 A GLU 43 1 3 9 A LEU 189 A LEU 45 HELX_P A GLN 192 A GLN 48 1 4 4 A PRO 196 A PRO 52 HELX_P A LEU 205 A LEU 61 1 5 10 A LEU 211 A LEU 67 HELX_P A ALA 217 A ALA 73 1 6 7 disulf 2.042 A CYS 198 A SG CYS 54 1_555 A CYS 218 A SG CYS 74 1_555 VIRAL PROTEIN CAPSID, ASSEMBLY PROTEIN, HIV-1, Viral protein POL_HV1N5 UNP 1 1 P12497 GARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNT IAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEE KAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTS TLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETL LVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKTVKCFNCGKEGHI AKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDK ELYPLASLRSLFGSDPSSQ 277 362 1A43 146 231 P12497 A 1 2 87 80 I 41