0.015050
0.000000
0.000000
0.000000
0.015050
0.000000
0.000000
0.000000
0.012303
0.00000
0.00000
0.00000
Lubkowski, J.
Yang, F.
Alexandratos, J.
Wlodawer, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
66.443
66.443
81.282
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C12 H11 N O8 S2
361.348
4-ACETYLAMINO-5-HYDROXYNAPHTHALENE-2,7-DISULFONIC ACID
non-polymer
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
95
4831
4836
10.1073/pnas.95.9.4831
9560188
Structure of the catalytic domain of avian sarcoma virus integrase with a bound HIV-1 integrase-targeted inhibitor.
1998
10.2210/pdb1a5x/pdb
pdb_00001a5x
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
295
1
MIRRORS
IMAGE PLATE
1997-08-17
MACSCIENCE
DOUBLE CRYSTAL SI(111)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ENRAF-NONIUS FR591
P03354 FRAGMENT OF POLYPROTEIN POL-RSVP
17398.922
INTEGRASE
2.7.7.49
CATALYTIC CORE DOMAIN
1
man
polymer
361.348
4-ACETYLAMINO-5-HYDROXYNAPHTHALENE-2,7-DISULFONIC ACID
1
syn
non-polymer
18.015
water
169
nat
water
no
no
PRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFTSKST
REWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNHFERGENTKTNL
PRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFTSKST
REWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNHFERGENTKTNL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Alpharetrovirus
Rous sarcoma virus
Schmidt-Ruppin
Escherichia
sample
SEE JRNL REFERENCE
11889
Rous sarcoma virus (strain Schmidt-Ruppin)
562
Escherichia coli
PRC23IN(52-207)
1
2.52
38.
7.5
20% PEG 4000, 10% ISOPROPANOL, 0.1M HEPES, PH 7.5
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Refinement description
1
0
1998-05-27
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1998-02-18
REL
REL
Y3
4-ACETYLAMINO-5-HYDROXYNAPHTHALENE-2,7-DISULFONIC ACID
HOH
water
THE APPARENT DISCREPANCY BETWEEN THE SEQUENCE PRESENTED
HERE AND THE "POL_RSVP" SEQUENCE IS A RESULT OF VIRAL
STRAIN VARIATION. THE STRAIN USED FOR THIS WORK,
"ROUS SARCOMA VIRUS SCHMIDT-RUPPIN B", COMPARED TO
"POL-RSVP" SEQUENCE DIFFERS AT TWO POSITIONS WITH THE
CONSERVATIVE AMINO ACID RESIDUE DIFFERENCES NOTED
(VAL -> ALA 101 AND ARG -> LYS 166).
1ASV
PDB ENTRY 1ASV
PDB
experimental model
Y3
1
2
Y3
Y3
1
A
HOH
2
3
HOH
HOH
210
A
HOH
3
3
HOH
HOH
211
A
HOH
4
3
HOH
HOH
212
A
HOH
5
3
HOH
HOH
213
A
HOH
6
3
HOH
HOH
214
A
HOH
7
3
HOH
HOH
215
A
HOH
8
3
HOH
HOH
216
A
HOH
9
3
HOH
HOH
217
A
HOH
10
3
HOH
HOH
218
A
HOH
11
3
HOH
HOH
219
A
HOH
12
3
HOH
HOH
220
A
HOH
13
3
HOH
HOH
221
A
HOH
14
3
HOH
HOH
222
A
HOH
15
3
HOH
HOH
223
A
HOH
16
3
HOH
HOH
224
A
HOH
17
3
HOH
HOH
225
A
HOH
18
3
HOH
HOH
226
A
HOH
19
3
HOH
HOH
227
A
HOH
20
3
HOH
HOH
228
A
HOH
21
3
HOH
HOH
229
A
HOH
22
3
HOH
HOH
230
A
HOH
23
3
HOH
HOH
231
A
HOH
24
3
HOH
HOH
232
A
HOH
25
3
HOH
HOH
233
A
HOH
26
3
HOH
HOH
234
A
HOH
27
3
HOH
HOH
235
A
HOH
28
3
HOH
HOH
236
A
HOH
29
3
HOH
HOH
237
A
HOH
30
3
HOH
HOH
238
A
HOH
31
3
HOH
HOH
239
A
HOH
32
3
HOH
HOH
240
A
HOH
33
3
HOH
HOH
241
A
HOH
34
3
HOH
HOH
242
A
HOH
35
3
HOH
HOH
243
A
HOH
36
3
HOH
HOH
244
A
HOH
37
3
HOH
HOH
245
A
HOH
38
3
HOH
HOH
246
A
HOH
39
3
HOH
HOH
247
A
HOH
40
3
HOH
HOH
248
A
HOH
41
3
HOH
HOH
249
A
HOH
42
3
HOH
HOH
250
A
HOH
43
3
HOH
HOH
251
A
HOH
44
3
HOH
HOH
252
A
HOH
45
3
HOH
HOH
253
A
HOH
46
3
HOH
HOH
254
A
HOH
47
3
HOH
HOH
255
A
HOH
48
3
HOH
HOH
256
A
HOH
49
3
HOH
HOH
257
A
HOH
50
3
HOH
HOH
258
A
HOH
51
3
HOH
HOH
259
A
HOH
52
3
HOH
HOH
260
A
HOH
53
3
HOH
HOH
261
A
HOH
54
3
HOH
HOH
262
A
HOH
55
3
HOH
HOH
263
A
HOH
56
3
HOH
HOH
264
A
HOH
57
3
HOH
HOH
265
A
HOH
58
3
HOH
HOH
266
A
HOH
59
3
HOH
HOH
267
A
HOH
60
3
HOH
HOH
268
A
HOH
61
3
HOH
HOH
269
A
HOH
62
3
HOH
HOH
270
A
HOH
63
3
HOH
HOH
271
A
HOH
64
3
HOH
HOH
272
A
HOH
65
3
HOH
HOH
273
A
HOH
66
3
HOH
HOH
274
A
HOH
67
3
HOH
HOH
275
A
HOH
68
3
HOH
HOH
276
A
HOH
69
3
HOH
HOH
277
A
HOH
70
3
HOH
HOH
278
A
HOH
71
3
HOH
HOH
279
A
HOH
72
3
HOH
HOH
280
A
HOH
73
3
HOH
HOH
281
A
HOH
74
3
HOH
HOH
282
A
HOH
75
3
HOH
HOH
283
A
HOH
76
3
HOH
HOH
284
A
HOH
77
3
HOH
HOH
285
A
HOH
78
3
HOH
HOH
286
A
HOH
79
3
HOH
HOH
287
A
HOH
80
3
HOH
HOH
288
A
HOH
81
3
HOH
HOH
289
A
HOH
82
3
HOH
HOH
290
A
HOH
83
3
HOH
HOH
291
A
HOH
84
3
HOH
HOH
292
A
HOH
85
3
HOH
HOH
293
A
HOH
86
3
HOH
HOH
294
A
HOH
87
3
HOH
HOH
295
A
HOH
88
3
HOH
HOH
296
A
HOH
89
3
HOH
HOH
297
A
HOH
90
3
HOH
HOH
298
A
HOH
91
3
HOH
HOH
299
A
HOH
92
3
HOH
HOH
300
A
HOH
93
3
HOH
HOH
301
A
HOH
94
3
HOH
HOH
302
A
HOH
95
3
HOH
HOH
303
A
HOH
96
3
HOH
HOH
304
A
HOH
97
3
HOH
HOH
305
A
HOH
98
3
HOH
HOH
306
A
HOH
99
3
HOH
HOH
307
A
HOH
100
3
HOH
HOH
308
A
HOH
101
3
HOH
HOH
309
A
HOH
102
3
HOH
HOH
310
A
HOH
103
3
HOH
HOH
311
A
HOH
104
3
HOH
HOH
312
A
HOH
105
3
HOH
HOH
313
A
HOH
106
3
HOH
HOH
314
A
HOH
107
3
HOH
HOH
315
A
HOH
108
3
HOH
HOH
316
A
HOH
109
3
HOH
HOH
317
A
HOH
110
3
HOH
HOH
318
A
HOH
111
3
HOH
HOH
319
A
HOH
112
3
HOH
HOH
320
A
HOH
113
3
HOH
HOH
321
A
HOH
114
3
HOH
HOH
322
A
HOH
115
3
HOH
HOH
323
A
HOH
116
3
HOH
HOH
324
A
HOH
117
3
HOH
HOH
325
A
HOH
118
3
HOH
HOH
326
A
HOH
119
3
HOH
HOH
327
A
HOH
120
3
HOH
HOH
328
A
HOH
121
3
HOH
HOH
329
A
HOH
122
3
HOH
HOH
330
A
HOH
123
3
HOH
HOH
331
A
HOH
124
3
HOH
HOH
332
A
HOH
125
3
HOH
HOH
333
A
HOH
126
3
HOH
HOH
334
A
HOH
127
3
HOH
HOH
335
A
HOH
128
3
HOH
HOH
336
A
HOH
129
3
HOH
HOH
337
A
HOH
130
3
HOH
HOH
338
A
HOH
131
3
HOH
HOH
339
A
HOH
132
3
HOH
HOH
340
A
HOH
133
3
HOH
HOH
341
A
HOH
134
3
HOH
HOH
342
A
HOH
135
3
HOH
HOH
343
A
HOH
136
3
HOH
HOH
344
A
HOH
137
3
HOH
HOH
345
A
HOH
138
3
HOH
HOH
346
A
HOH
139
3
HOH
HOH
347
A
HOH
140
3
HOH
HOH
348
A
HOH
141
3
HOH
HOH
349
A
HOH
142
3
HOH
HOH
350
A
HOH
143
3
HOH
HOH
351
A
HOH
144
3
HOH
HOH
352
A
HOH
145
3
HOH
HOH
353
A
HOH
146
3
HOH
HOH
354
A
HOH
147
3
HOH
HOH
355
A
HOH
148
3
HOH
HOH
356
A
HOH
149
3
HOH
HOH
357
A
HOH
150
3
HOH
HOH
358
A
HOH
151
3
HOH
HOH
359
A
HOH
152
3
HOH
HOH
360
A
HOH
153
3
HOH
HOH
361
A
HOH
154
3
HOH
HOH
362
A
HOH
155
3
HOH
HOH
363
A
HOH
156
3
HOH
HOH
364
A
HOH
157
3
HOH
HOH
365
A
HOH
158
3
HOH
HOH
366
A
HOH
159
3
HOH
HOH
367
A
HOH
160
3
HOH
HOH
368
A
HOH
161
3
HOH
HOH
369
A
HOH
162
3
HOH
HOH
370
A
HOH
163
3
HOH
HOH
371
A
HOH
164
3
HOH
HOH
372
A
HOH
165
3
HOH
HOH
373
A
HOH
166
3
HOH
HOH
374
A
HOH
167
3
HOH
HOH
375
A
HOH
168
3
HOH
HOH
376
A
HOH
169
3
HOH
HOH
377
A
HOH
170
3
HOH
HOH
378
A
n
1
52
A
n
2
53
A
GLY
54
n
3
GLY
54
A
LEU
55
n
4
LEU
55
A
GLY
56
n
5
GLY
56
A
PRO
57
n
6
PRO
57
A
LEU
58
n
7
LEU
58
A
GLN
59
n
8
GLN
59
A
ILE
60
n
9
ILE
60
A
TRP
61
n
10
TRP
61
A
GLN
62
n
11
GLN
62
A
THR
63
n
12
THR
63
A
ASP
64
n
13
ASP
64
A
PHE
65
n
14
PHE
65
A
THR
66
n
15
THR
66
A
LEU
67
n
16
LEU
67
A
GLU
68
n
17
GLU
68
A
PRO
69
n
18
PRO
69
A
ARG
70
n
19
ARG
70
A
MET
71
n
20
MET
71
A
ALA
72
n
21
ALA
72
A
PRO
73
n
22
PRO
73
A
ARG
74
n
23
ARG
74
A
SER
75
n
24
SER
75
A
TRP
76
n
25
TRP
76
A
LEU
77
n
26
LEU
77
A
ALA
78
n
27
ALA
78
A
VAL
79
n
28
VAL
79
A
THR
80
n
29
THR
80
A
VAL
81
n
30
VAL
81
A
ASP
82
n
31
ASP
82
A
THR
83
n
32
THR
83
A
ALA
84
n
33
ALA
84
A
SER
85
n
34
SER
85
A
SER
86
n
35
SER
86
A
ALA
87
n
36
ALA
87
A
ILE
88
n
37
ILE
88
A
VAL
89
n
38
VAL
89
A
VAL
90
n
39
VAL
90
A
THR
91
n
40
THR
91
A
GLN
92
n
41
GLN
92
A
HIS
93
n
42
HIS
93
A
GLY
94
n
43
GLY
94
A
ARG
95
n
44
ARG
95
A
VAL
96
n
45
VAL
96
A
THR
97
n
46
THR
97
A
SER
98
n
47
SER
98
A
VAL
99
n
48
VAL
99
A
ALA
100
n
49
ALA
100
A
ALA
101
n
50
ALA
101
A
GLN
102
n
51
GLN
102
A
HIS
103
n
52
HIS
103
A
HIS
104
n
53
HIS
104
A
TRP
105
n
54
TRP
105
A
ALA
106
n
55
ALA
106
A
THR
107
n
56
THR
107
A
ALA
108
n
57
ALA
108
A
ILE
109
n
58
ILE
109
A
ALA
110
n
59
ALA
110
A
VAL
111
n
60
VAL
111
A
LEU
112
n
61
LEU
112
A
GLY
113
n
62
GLY
113
A
ARG
114
n
63
ARG
114
A
PRO
115
n
64
PRO
115
A
LYS
116
n
65
LYS
116
A
ALA
117
n
66
ALA
117
A
ILE
118
n
67
ILE
118
A
LYS
119
n
68
LYS
119
A
THR
120
n
69
THR
120
A
ASP
121
n
70
ASP
121
A
ASN
122
n
71
ASN
122
A
GLY
123
n
72
GLY
123
A
SER
124
n
73
SER
124
A
CYS
125
n
74
CYS
125
A
PHE
126
n
75
PHE
126
A
THR
127
n
76
THR
127
A
SER
128
n
77
SER
128
A
LYS
129
n
78
LYS
129
A
SER
130
n
79
SER
130
A
THR
131
n
80
THR
131
A
ARG
132
n
81
ARG
132
A
GLU
133
n
82
GLU
133
A
TRP
134
n
83
TRP
134
A
LEU
135
n
84
LEU
135
A
ALA
136
n
85
ALA
136
A
ARG
137
n
86
ARG
137
A
TRP
138
n
87
TRP
138
A
GLY
139
n
88
GLY
139
A
ILE
140
n
89
ILE
140
A
ALA
141
n
90
ALA
141
A
HIS
142
n
91
HIS
142
A
THR
143
n
92
THR
143
A
THR
144
n
93
THR
144
A
GLY
145
n
94
GLY
145
A
ILE
146
n
95
ILE
146
A
PRO
147
n
96
PRO
147
A
GLY
148
n
97
GLY
148
A
ASN
149
n
98
ASN
149
A
SER
150
n
99
SER
150
A
GLN
151
n
100
GLN
151
A
GLY
152
n
101
GLY
152
A
GLN
153
n
102
GLN
153
A
ALA
154
n
103
ALA
154
A
MET
155
n
104
MET
155
A
VAL
156
n
105
VAL
156
A
GLU
157
n
106
GLU
157
A
ARG
158
n
107
ARG
158
A
ALA
159
n
108
ALA
159
A
ASN
160
n
109
ASN
160
A
ARG
161
n
110
ARG
161
A
LEU
162
n
111
LEU
162
A
LEU
163
n
112
LEU
163
A
LYS
164
n
113
LYS
164
A
ASP
165
n
114
ASP
165
A
LYS
166
n
115
LYS
166
A
ILE
167
n
116
ILE
167
A
ARG
168
n
117
ARG
168
A
VAL
169
n
118
VAL
169
A
LEU
170
n
119
LEU
170
A
ALA
171
n
120
ALA
171
A
GLU
172
n
121
GLU
172
A
GLY
173
n
122
GLY
173
A
ASP
174
n
123
ASP
174
A
GLY
175
n
124
GLY
175
A
PHE
176
n
125
PHE
176
A
MET
177
n
126
MET
177
A
LYS
178
n
127
LYS
178
A
ARG
179
n
128
ARG
179
A
ILE
180
n
129
ILE
180
A
PRO
181
n
130
PRO
181
A
THR
182
n
131
THR
182
A
SER
183
n
132
SER
183
A
LYS
184
n
133
LYS
184
A
GLN
185
n
134
GLN
185
A
GLY
186
n
135
GLY
186
A
GLU
187
n
136
GLU
187
A
LEU
188
n
137
LEU
188
A
LEU
189
n
138
LEU
189
A
ALA
190
n
139
ALA
190
A
LYS
191
n
140
LYS
191
A
ALA
192
n
141
ALA
192
A
MET
193
n
142
MET
193
A
TYR
194
n
143
TYR
194
A
ALA
195
n
144
ALA
195
A
LEU
196
n
145
LEU
196
A
ASN
197
n
146
ASN
197
A
HIS
198
n
147
HIS
198
A
PHE
199
n
148
PHE
199
A
n
149
200
A
n
150
201
A
n
151
202
A
n
152
203
A
n
153
204
A
n
154
205
A
n
155
206
A
n
156
207
A
n
157
208
A
n
158
209
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_666
-y+1,-x+1,-z+3/2
crystal symmetry operation
66.4430000000
66.4430000000
121.9230000000
A
O
VAL
89
A
O
VAL
38
A
N
THR
80
A
N
THR
29
A
O
LEU
77
A
O
LEU
26
A
N
THR
66
A
N
THR
15
A
O
TRP
61
A
O
TRP
10
A
N
ALA
117
A
N
ALA
66
A
O
ILE
118
A
O
ILE
67
A
N
ALA
141
A
N
ALA
90
1
A
PRO
52
A
PRO
1
1
Y
1
A
ARG
53
A
ARG
2
1
Y
1
A
GLY
54
A
GLY
3
0
Y
1
A
PRO
147
A
PRO
96
0
Y
1
A
GLY
148
A
GLY
97
0
Y
1
A
ASN
149
A
ASN
98
0
Y
1
A
SER
150
A
SER
99
0
Y
1
A
GLN
151
A
GLN
100
0
Y
1
A
GLY
152
A
GLY
101
0
Y
1
A
GLU
200
A
GLU
149
1
Y
1
A
ARG
201
A
ARG
150
1
Y
1
A
GLY
202
A
GLY
151
1
Y
1
A
GLU
203
A
GLU
152
1
Y
1
A
ASN
204
A
ASN
153
1
Y
1
A
THR
205
A
THR
154
1
Y
1
A
LYS
206
A
LYS
155
1
Y
1
A
THR
207
A
THR
156
1
Y
1
A
ASN
208
A
ASN
157
1
Y
1
A
LEU
209
A
LEU
158
1
Y
1
A
ASP
121
-79.34
-161.46
1
A
PRO
147
-73.65
-166.53
1
A
GLN
153
-63.56
80.82
1
A
LYS
178
-119.13
-123.90
PARHCSDX_FY.PRO
TOPHCSDX_FY.PRO
PARAM_SIMPLE.INHIBITOR
TOPH_SIMPLE.INHIBITOR
PARAM19.SOLV
TOPH19.SOLV
30.26
ATOMIC OCCUPANCIES OF DISORDERED ATOMS ARE SET TO 0.00 IN
THE COORDINATES.
0.2120000
0.1550000
0.1550000
1.9
8.0
1351
13681
10.
93.3
RANDOM
100000.
0.1
1
FREE R
2.0
MOLECULAR REPLACEMENT
PDB ENTRY 1ASV
1.9
8.0
169
1322
23
0
1130
0.012
1.67
23.37
1.99
0.2252000
0.2112000
1.99
163
1326
8
10.
83.3
1.9
20.0
1A5X
14942
-3.0
0.0580000
1
16.6
7.72
99.9
1.9
1.97
0.3730000
99.6
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
3.1
ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3
1
N
N
2
N
N
3
N
N
THE AUTHOR MAINTAINS THAT THE BIOLOGICAL UNIT IS NOT YET KNOWN.
THE MINIMUM MULTIMER IS BELIEVED TO CONTAIN AT LEAST THE DIMER
GENERATED BT THE TRANSFORMATION IN REMARK 350, SHOWN IN
BOTH HIV-1 AND ASV INTEGRASE CORE DOMAIN STRUCTURES.
A
PRO
69
A
PRO
18
HELX_P
A
MET
71
A
MET
20
5
1
3
A
SER
98
A
SER
47
HELX_P
A
LEU
112
A
LEU
61
1
2
15
A
SER
124
A
SER
73
HELX_P
A
THR
127
A
THR
76
1
3
4
A
LYS
129
A
LYS
78
HELX_P
A
TRP
138
A
TRP
87
1
4
10
A
ALA
154
A
ALA
103
HELX_P
A
ASP
174
A
ASP
123
1
5
21
A
THR
182
A
THR
131
HELX_P
A
ASN
197
A
ASN
146
1
6
16
HYDROLASE
HYDROLASE, ENDONUCLEASE, HIV-1 INTEGRASE INHIBITOR
A
ALA
72
A
ALA
21
1
A
PRO
73
A
PRO
22
10.90
POL_RSVP
UNP
1
624
P03354
624
779
1A5X
52
207
P03354
A
1
1
156
1
VAL
variant
ALA
101
1A5X
A
P03354
UNP
673
50
1
ARG
variant
LYS
166
1A5X
A
P03354
UNP
738
115
5
anti-parallel
anti-parallel
parallel
parallel
A
ILE
88
A
ILE
37
A
HIS
93
A
HIS
42
A
TRP
76
A
TRP
25
A
ASP
82
A
ASP
31
A
ILE
60
A
ILE
9
A
LEU
67
A
LEU
16
A
ALA
117
A
ALA
66
A
LYS
119
A
LYS
68
A
ALA
141
A
ALA
90
A
THR
143
A
THR
92
ACTIVE SITE.
Unknown
3
BINDING SITE FOR RESIDUE Y3 A 1
A
Y3
1
Software
11
A
ASP
64
A
ASP
13
3
1_555
A
ASP
121
A
ASP
70
3
1_555
A
GLU
157
A
GLU
106
3
1_555
A
GLN
62
A
GLN
11
11
1_555
A
LYS
119
A
LYS
68
11
8_666
A
LYS
119
A
LYS
68
11
1_555
A
ILE
146
A
ILE
95
11
8_666
A
GLN
153
A
GLN
102
11
8_666
A
ALA
154
A
ALA
103
11
1_555
A
MET
155
A
MET
104
11
1_555
A
HOH
265
C
HOH
11
1_555
A
HOH
299
C
HOH
11
8_666
A
HOH
299
C
HOH
11
1_555
A
HOH
333
C
HOH
11
8_666
96
P 43 21 2