1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Briercheck, D.M.
Wood, T.C.
Allison, T.J.
Richardson, J.P.
Rule, G.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
S
C
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
N
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
S
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
O
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
R
C
N
292
N
O
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
Y
233
N
doub
Y
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
doub
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
doub
Y
303
N
sing
Y
304
N
sing
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
5
393
399
10.1038/nsb0598-393
9587002
The NMR structure of the RNA binding domain of E. coli rho factor suggests possible RNA-protein interactions.
1998
To be Published
0353
Crystal Structure of the RNA-Binding Domain from Transcription Termination Factor Rho
NE
J.Biomol.NMR
JBNME9
0800
0925-2738
8
429
1H, 15N and 13C Resonance Assignments and Secondary Structure Determination of the RNA-Binding Domain of E.Coli Rho Protein
1996
10.2210/pdb1a63/pdb
pdb_00001a63
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
14634.602
RHO
RNA BINDING DOMAIN, RESIDUES 1 - 130
1
man
polymer
no
no
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIY
VSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNK
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIY
VSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia coli
BL21 (DE3)
Escherichia
Escherichia coli
sample
BL21
469008
Escherichia coli BL21(DE3)
RHO
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
T7
PLASMID
PET11A
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Derived calculations
Other
Data collection
Database references
1
0
1998-05-27
1
1
2008-03-24
1
2
2011-07-13
1
3
2019-11-06
1
4
2024-04-10
_pdbx_database_status.process_site
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.manufacturer
_pdbx_nmr_spectrometer.model
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Y
BNL
1998-03-05
REL
LOWEST ENERGY
140
10
NOESY TRIPLE RESONANCE
7.0
298
K
STRUCTURES WERE GENERATED USING DISTANCE GEOMETRY FOLLOWED BY SIMULATED ANNEALING. THE 10 LOWEST ENERGY STRUCTURES ARE REPORTED. THE RMSD FOR ALL BACKBONE INVOLVED IN SECONDARY STRUCTURE
DISTANCE GEOMETRY, SIMULATED ANNEALING
BRUNGER
refinement
X-PLOR
3.851
structure solution
Felix
BRUNGER
structure solution
X-PLOR
500
Varian
UNITYPLUS
600
Bruker
DMX
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
LEU
3
n
3
LEU
3
A
THR
4
n
4
THR
4
A
GLU
5
n
5
GLU
5
A
LEU
6
n
6
LEU
6
A
LYS
7
n
7
LYS
7
A
ASN
8
n
8
ASN
8
A
THR
9
n
9
THR
9
A
PRO
10
n
10
PRO
10
A
VAL
11
n
11
VAL
11
A
SER
12
n
12
SER
12
A
GLU
13
n
13
GLU
13
A
LEU
14
n
14
LEU
14
A
ILE
15
n
15
ILE
15
A
THR
16
n
16
THR
16
A
LEU
17
n
17
LEU
17
A
GLY
18
n
18
GLY
18
A
GLU
19
n
19
GLU
19
A
ASN
20
n
20
ASN
20
A
MET
21
n
21
MET
21
A
GLY
22
n
22
GLY
22
A
LEU
23
n
23
LEU
23
A
GLU
24
n
24
GLU
24
A
ASN
25
n
25
ASN
25
A
LEU
26
n
26
LEU
26
A
ALA
27
n
27
ALA
27
A
ARG
28
n
28
ARG
28
A
MET
29
n
29
MET
29
A
ARG
30
n
30
ARG
30
A
LYS
31
n
31
LYS
31
A
GLN
32
n
32
GLN
32
A
ASP
33
n
33
ASP
33
A
ILE
34
n
34
ILE
34
A
ILE
35
n
35
ILE
35
A
PHE
36
n
36
PHE
36
A
ALA
37
n
37
ALA
37
A
ILE
38
n
38
ILE
38
A
LEU
39
n
39
LEU
39
A
LYS
40
n
40
LYS
40
A
GLN
41
n
41
GLN
41
A
HIS
42
n
42
HIS
42
A
ALA
43
n
43
ALA
43
A
LYS
44
n
44
LYS
44
A
SER
45
n
45
SER
45
A
GLY
46
n
46
GLY
46
A
GLU
47
n
47
GLU
47
A
ASP
48
n
48
ASP
48
A
ILE
49
n
49
ILE
49
A
PHE
50
n
50
PHE
50
A
GLY
51
n
51
GLY
51
A
ASP
52
n
52
ASP
52
A
GLY
53
n
53
GLY
53
A
VAL
54
n
54
VAL
54
A
LEU
55
n
55
LEU
55
A
GLU
56
n
56
GLU
56
A
ILE
57
n
57
ILE
57
A
LEU
58
n
58
LEU
58
A
GLN
59
n
59
GLN
59
A
ASP
60
n
60
ASP
60
A
GLY
61
n
61
GLY
61
A
PHE
62
n
62
PHE
62
A
GLY
63
n
63
GLY
63
A
PHE
64
n
64
PHE
64
A
LEU
65
n
65
LEU
65
A
ARG
66
n
66
ARG
66
A
SER
67
n
67
SER
67
A
ALA
68
n
68
ALA
68
A
ASP
69
n
69
ASP
69
A
SER
70
n
70
SER
70
A
SER
71
n
71
SER
71
A
TYR
72
n
72
TYR
72
A
LEU
73
n
73
LEU
73
A
ALA
74
n
74
ALA
74
A
GLY
75
n
75
GLY
75
A
PRO
76
n
76
PRO
76
A
ASP
77
n
77
ASP
77
A
ASP
78
n
78
ASP
78
A
ILE
79
n
79
ILE
79
A
TYR
80
n
80
TYR
80
A
VAL
81
n
81
VAL
81
A
SER
82
n
82
SER
82
A
PRO
83
n
83
PRO
83
A
SER
84
n
84
SER
84
A
GLN
85
n
85
GLN
85
A
ILE
86
n
86
ILE
86
A
ARG
87
n
87
ARG
87
A
ARG
88
n
88
ARG
88
A
PHE
89
n
89
PHE
89
A
ASN
90
n
90
ASN
90
A
LEU
91
n
91
LEU
91
A
ARG
92
n
92
ARG
92
A
THR
93
n
93
THR
93
A
GLY
94
n
94
GLY
94
A
ASP
95
n
95
ASP
95
A
THR
96
n
96
THR
96
A
ILE
97
n
97
ILE
97
A
SER
98
n
98
SER
98
A
GLY
99
n
99
GLY
99
A
LYS
100
n
100
LYS
100
A
ILE
101
n
101
ILE
101
A
ARG
102
n
102
ARG
102
A
PRO
103
n
103
PRO
103
A
PRO
104
n
104
PRO
104
A
LYS
105
n
105
LYS
105
A
GLU
106
n
106
GLU
106
A
GLY
107
n
107
GLY
107
A
GLU
108
n
108
GLU
108
A
ARG
109
n
109
ARG
109
A
TYR
110
n
110
TYR
110
A
PHE
111
n
111
PHE
111
A
ALA
112
n
112
ALA
112
A
LEU
113
n
113
LEU
113
A
LEU
114
n
114
LEU
114
A
LYS
115
n
115
LYS
115
A
VAL
116
n
116
VAL
116
A
ASN
117
n
117
ASN
117
A
GLU
118
n
118
GLU
118
A
VAL
119
n
119
VAL
119
A
ASN
120
n
120
ASN
120
A
PHE
121
n
121
PHE
121
A
ASP
122
n
122
ASP
122
A
LYS
123
n
123
LYS
123
A
PRO
124
n
124
PRO
124
A
GLU
125
n
125
GLU
125
A
ASN
126
n
126
ASN
126
A
ALA
127
n
127
ALA
127
A
ARG
128
n
128
ARG
128
A
ASN
129
n
129
ASN
129
A
LYS
130
n
130
LYS
130
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
51
A
O
GLY
51
A
N
GLY
99
A
N
GLY
99
A
O
SER
98
A
O
SER
98
A
N
GLU
118
A
N
GLU
118
A
O
GLY
63
A
O
GLY
63
A
N
VAL
81
A
N
VAL
81
1
A
A
O
H
LEU
MET
26
29
1.46
1
A
A
HH22
O
ARG
LEU
66
73
1.50
1
A
A
O
H
PRO
ARG
83
87
1.53
1
A
A
O
H
GLU
TYR
108
110
1.54
1
A
A
O
H
LEU
GLY
58
61
1.56
1
A
A
O
H
ALA
GLY
43
46
1.56
1
A
A
O
HD21
THR
ASN
4
8
1.56
1
A
A
HG
OE1
SER
GLU
12
13
1.58
2
A
A
O
H
LEU
MET
26
29
1.48
2
A
A
O
H
ALA
GLY
43
46
1.50
2
A
A
O
H
LEU
GLY
58
61
1.50
2
A
A
O
H
PRO
ARG
83
87
1.58
2
A
A
OD1
H
ASN
GLU
2
5
1.58
3
A
A
O
H
LEU
MET
26
29
1.52
3
A
A
O
H
PRO
ARG
83
87
1.52
3
A
A
OE1
H
GLU
VAL
118
119
1.55
3
A
A
O
H
LEU
GLY
58
61
1.55
3
A
A
O
H
ALA
GLY
43
46
1.56
4
A
A
O
H
LEU
MET
26
29
1.46
4
A
A
O
H
ALA
GLY
43
46
1.50
4
A
A
O
H
PRO
ARG
83
87
1.52
4
A
A
O
H
LEU
GLY
58
61
1.58
4
A
A
O
H
SER
ARG
84
88
1.60
5
A
A
O
H
GLU
TYR
108
110
1.51
5
A
A
O
H
ALA
GLY
43
46
1.53
5
A
A
O
H
PRO
ARG
83
87
1.55
5
A
A
O
H
LEU
GLY
58
61
1.56
6
A
A
O
H
LEU
MET
26
29
1.47
6
A
A
O
H
PRO
ARG
83
87
1.50
6
A
A
H
OD1
GLY
ASP
75
78
1.50
6
A
A
O
H
ALA
GLY
43
46
1.52
6
A
A
O
H
LEU
GLY
58
61
1.54
6
A
A
O
HD21
THR
ASN
4
8
1.57
6
A
A
O
H
GLU
TYR
108
110
1.57
6
A
A
O
H
SER
ARG
84
88
1.59
7
A
A
O
H
LEU
MET
26
29
1.48
7
A
A
O
H
ALA
GLY
43
46
1.53
7
A
A
O
H
GLU
TYR
108
110
1.53
7
A
A
O
H
LEU
GLY
58
61
1.56
7
A
A
O
H
PRO
ARG
83
87
1.60
8
A
A
O
H
ALA
ASP
74
77
1.37
8
A
A
O
H
LEU
MET
26
29
1.46
8
A
A
O
H
GLU
TYR
108
110
1.49
8
A
A
O
H
ALA
GLY
43
46
1.56
8
A
A
O
H
PRO
ARG
83
87
1.57
9
A
A
O
H
ALA
GLY
43
46
1.45
9
A
A
O
H
LEU
GLY
58
61
1.53
9
A
A
O
H
PRO
ARG
83
87
1.56
9
A
A
O
HD21
THR
ASN
4
8
1.56
10
A
A
O
H
LEU
MET
26
29
1.46
10
A
A
O
H
GLU
TYR
108
110
1.51
10
A
A
O
H
PRO
ARG
83
87
1.52
10
A
A
O
H
LEU
GLY
58
61
1.56
10
A
A
O
HD21
GLU
ASN
125
126
1.57
10
A
A
O
H
ALA
GLY
43
46
1.59
1
A
ARG
28
0.239
SIDE CHAIN
1
A
ARG
30
0.273
SIDE CHAIN
1
A
ARG
66
0.229
SIDE CHAIN
1
A
ARG
87
0.317
SIDE CHAIN
1
A
ARG
88
0.317
SIDE CHAIN
1
A
ARG
92
0.270
SIDE CHAIN
1
A
ARG
102
0.311
SIDE CHAIN
1
A
ARG
109
0.284
SIDE CHAIN
1
A
ARG
128
0.194
SIDE CHAIN
2
A
ARG
28
0.172
SIDE CHAIN
2
A
ARG
30
0.139
SIDE CHAIN
2
A
ARG
66
0.298
SIDE CHAIN
2
A
ARG
87
0.268
SIDE CHAIN
2
A
ARG
88
0.309
SIDE CHAIN
2
A
ARG
92
0.209
SIDE CHAIN
2
A
ARG
102
0.313
SIDE CHAIN
2
A
ARG
109
0.256
SIDE CHAIN
2
A
ARG
128
0.313
SIDE CHAIN
3
A
ARG
28
0.314
SIDE CHAIN
3
A
ARG
30
0.193
SIDE CHAIN
3
A
ARG
87
0.303
SIDE CHAIN
3
A
ARG
88
0.316
SIDE CHAIN
3
A
ARG
92
0.296
SIDE CHAIN
3
A
ARG
102
0.306
SIDE CHAIN
3
A
ARG
128
0.275
SIDE CHAIN
4
A
ARG
28
0.233
SIDE CHAIN
4
A
ARG
30
0.306
SIDE CHAIN
4
A
ARG
66
0.132
SIDE CHAIN
4
A
ARG
87
0.263
SIDE CHAIN
4
A
ARG
88
0.172
SIDE CHAIN
4
A
ARG
92
0.254
SIDE CHAIN
4
A
ARG
102
0.317
SIDE CHAIN
4
A
ARG
128
0.317
SIDE CHAIN
5
A
ARG
28
0.220
SIDE CHAIN
5
A
ARG
30
0.154
SIDE CHAIN
5
A
ARG
87
0.080
SIDE CHAIN
5
A
ARG
88
0.311
SIDE CHAIN
5
A
ARG
92
0.300
SIDE CHAIN
5
A
ARG
102
0.234
SIDE CHAIN
5
A
ARG
109
0.284
SIDE CHAIN
5
A
ARG
128
0.277
SIDE CHAIN
6
A
ARG
28
0.314
SIDE CHAIN
6
A
ARG
30
0.317
SIDE CHAIN
6
A
ARG
66
0.310
SIDE CHAIN
6
A
ARG
87
0.139
SIDE CHAIN
6
A
ARG
88
0.213
SIDE CHAIN
6
A
ARG
92
0.250
SIDE CHAIN
6
A
ARG
102
0.317
SIDE CHAIN
6
A
ARG
109
0.300
SIDE CHAIN
6
A
ARG
128
0.302
SIDE CHAIN
7
A
ARG
28
0.295
SIDE CHAIN
7
A
ARG
30
0.315
SIDE CHAIN
7
A
ARG
66
0.223
SIDE CHAIN
7
A
ARG
87
0.302
SIDE CHAIN
7
A
ARG
88
0.315
SIDE CHAIN
7
A
ARG
92
0.097
SIDE CHAIN
7
A
ARG
102
0.157
SIDE CHAIN
7
A
ARG
109
0.294
SIDE CHAIN
7
A
ARG
128
0.213
SIDE CHAIN
8
A
ARG
28
0.266
SIDE CHAIN
8
A
ARG
30
0.251
SIDE CHAIN
8
A
ARG
66
0.155
SIDE CHAIN
8
A
ARG
87
0.260
SIDE CHAIN
8
A
ARG
88
0.317
SIDE CHAIN
8
A
ARG
92
0.318
SIDE CHAIN
8
A
ARG
102
0.316
SIDE CHAIN
8
A
ARG
109
0.294
SIDE CHAIN
8
A
ARG
128
0.243
SIDE CHAIN
9
A
ARG
28
0.165
SIDE CHAIN
9
A
ARG
30
0.122
SIDE CHAIN
9
A
ARG
66
0.213
SIDE CHAIN
9
A
ARG
87
0.310
SIDE CHAIN
9
A
ARG
88
0.313
SIDE CHAIN
9
A
ARG
92
0.172
SIDE CHAIN
9
A
ARG
102
0.316
SIDE CHAIN
9
A
ARG
109
0.154
SIDE CHAIN
9
A
ARG
128
0.303
SIDE CHAIN
10
A
ARG
28
0.312
SIDE CHAIN
10
A
ARG
30
0.230
SIDE CHAIN
10
A
ARG
87
0.233
SIDE CHAIN
10
A
ARG
88
0.249
SIDE CHAIN
10
A
ARG
92
0.279
SIDE CHAIN
10
A
ARG
109
0.241
SIDE CHAIN
10
A
ARG
128
0.230
SIDE CHAIN
1
A
LYS
31
-35.91
-34.54
1
A
ARG
66
177.12
-154.21
1
A
SER
67
-65.20
-148.90
1
A
ASP
69
-65.64
-162.18
1
A
SER
70
-126.74
-74.58
1
A
SER
71
78.20
-10.93
1
A
TYR
72
75.38
-45.06
1
A
ALA
74
-80.68
-148.63
1
A
ASP
78
-77.12
-158.44
1
A
PRO
104
-72.17
-93.90
1
A
GLU
108
-85.72
-78.68
1
A
ARG
109
65.08
-59.91
1
A
LEU
114
-127.84
-55.48
1
A
ASN
120
39.61
51.61
1
A
PRO
124
-71.79
44.73
1
A
GLU
125
-177.51
-153.40
1
A
ASN
126
167.00
-150.38
1
A
ALA
127
172.88
33.17
1
A
ASN
129
63.27
140.65
2
A
GLN
59
-32.74
-37.05
2
A
ARG
66
-178.42
-179.97
2
A
SER
67
-71.51
-159.12
2
A
ALA
68
-120.42
-85.76
2
A
ASP
69
-69.09
56.06
2
A
SER
71
169.47
-14.84
2
A
TYR
72
76.64
-42.57
2
A
ALA
74
-79.54
-156.86
2
A
ASP
78
-70.74
-154.05
2
A
PRO
104
-68.48
-99.18
2
A
ARG
109
66.37
-52.61
2
A
LEU
114
-132.79
-59.55
2
A
ASN
120
-32.80
-31.54
2
A
PHE
121
-157.29
59.08
2
A
PRO
124
-79.58
31.24
2
A
GLU
125
-179.12
-134.67
2
A
ASN
126
167.58
-83.41
2
A
ALA
127
-179.55
-165.84
3
A
LEU
23
-103.52
63.98
3
A
GLU
24
-57.11
-167.71
3
A
GLN
59
-38.24
-36.72
3
A
ARG
66
178.26
-162.75
3
A
SER
67
-72.74
-156.80
3
A
ALA
68
-127.30
-90.86
3
A
ASP
69
-73.36
48.36
3
A
SER
71
177.86
-26.90
3
A
TYR
72
76.41
-43.54
3
A
ALA
74
-79.18
-157.69
3
A
ASP
78
-76.37
-152.91
3
A
PRO
104
-71.65
-152.06
3
A
ARG
109
68.84
-41.42
3
A
LEU
114
-127.93
-55.90
3
A
PHE
121
38.12
33.45
3
A
PRO
124
-72.66
41.75
3
A
GLU
125
-178.17
-135.22
3
A
ASN
126
167.69
-66.68
3
A
ARG
128
174.29
-30.11
4
A
GLN
59
-39.77
-36.37
4
A
SER
67
-76.71
-161.17
4
A
ALA
68
-127.68
-89.73
4
A
ASP
69
-77.24
44.69
4
A
SER
71
175.37
-20.45
4
A
TYR
72
75.00
-40.76
4
A
ALA
74
-80.03
-153.01
4
A
ASP
78
-58.97
-154.65
4
A
PRO
104
-68.31
-93.11
4
A
GLU
108
-93.51
35.02
4
A
ARG
109
-25.13
-45.08
4
A
LEU
114
-130.86
-59.41
4
A
PRO
124
-73.65
42.63
4
A
GLU
125
-179.25
-144.73
4
A
ASN
126
162.74
-90.14
5
A
ARG
66
172.49
-169.73
5
A
SER
67
-71.94
-159.96
5
A
ALA
68
-107.03
-76.02
5
A
SER
71
165.65
-12.95
5
A
TYR
72
77.52
-45.94
5
A
ALA
74
-79.03
-162.21
5
A
ASP
78
-77.43
-150.03
5
A
PRO
104
-80.12
-95.77
5
A
GLU
108
-86.01
-71.32
5
A
ARG
109
64.22
-58.06
5
A
LEU
114
-128.74
-55.18
5
A
PHE
121
39.41
35.90
5
A
PRO
124
-72.86
44.13
5
A
GLU
125
-176.55
-153.29
5
A
ASN
126
168.34
31.15
6
A
GLN
59
-38.59
-36.25
6
A
ARG
66
-129.42
-169.22
6
A
SER
67
-76.76
-153.66
6
A
ASP
69
-78.54
-155.52
6
A
TYR
72
72.63
-38.25
6
A
ALA
74
-57.16
-153.66
6
A
ASP
78
-54.07
-115.03
6
A
PRO
104
-71.56
-152.68
6
A
GLU
106
-51.56
178.32
6
A
ARG
109
59.54
-37.25
6
A
LEU
114
-129.07
-56.36
6
A
ASN
120
-24.48
-41.98
6
A
PHE
121
-160.91
56.72
6
A
GLU
125
-177.79
-127.35
6
A
ASN
126
173.65
-143.72
6
A
ARG
128
-141.76
-50.39
7
A
GLN
59
-39.57
-36.99
7
A
ARG
66
177.09
-173.91
7
A
SER
67
-74.72
-155.51
7
A
ALA
68
-117.72
-87.35
7
A
SER
71
170.74
-21.13
7
A
TYR
72
77.24
-43.65
7
A
ALA
74
-79.66
-156.82
7
A
ASP
78
-67.18
-155.74
7
A
PRO
104
-81.43
-89.71
7
A
GLU
108
-85.56
-81.34
7
A
ARG
109
64.40
-55.29
7
A
LEU
114
-128.28
-58.32
7
A
PHE
121
38.23
33.57
7
A
PRO
124
-72.69
48.59
7
A
GLU
125
-170.69
-122.49
7
A
ASN
126
50.68
-132.70
7
A
ALA
127
-170.13
-172.27
8
A
LYS
31
-29.88
-47.57
8
A
ARG
66
178.61
-163.45
8
A
SER
67
-71.43
-155.25
8
A
ASP
69
-62.97
-141.03
8
A
SER
70
-62.55
-71.23
8
A
SER
71
167.20
-23.89
8
A
TYR
72
74.22
-41.09
8
A
ASP
78
-58.60
-137.95
8
A
PRO
104
-86.96
47.62
8
A
ARG
109
64.48
-59.11
8
A
LEU
114
-121.89
-54.48
8
A
PHE
121
38.24
34.19
8
A
PRO
124
-67.29
48.08
8
A
GLU
125
-177.21
-171.87
8
A
ASN
126
171.06
-146.14
9
A
GLN
59
-38.47
-35.15
9
A
ARG
66
-158.45
-148.34
9
A
SER
67
-70.66
-153.64
9
A
ASP
69
-78.34
-152.09
9
A
SER
70
-68.78
-134.84
9
A
SER
71
167.61
-22.93
9
A
TYR
72
76.60
-43.57
9
A
LEU
73
-77.44
-162.69
9
A
ALA
74
-57.82
-145.96
9
A
ASP
78
-58.90
-124.77
9
A
PRO
104
-62.58
-139.08
9
A
GLU
106
-50.08
179.77
9
A
ARG
109
66.19
-40.31
9
A
LEU
114
-130.99
-63.19
9
A
ASN
120
-35.08
-29.97
9
A
PHE
121
-160.45
59.15
9
A
PRO
124
-77.16
40.66
9
A
GLU
125
-176.47
-143.99
9
A
ASN
126
166.22
29.37
9
A
ALA
127
-149.79
28.88
9
A
ARG
128
-128.23
-76.30
10
A
GLN
59
-39.49
-36.54
10
A
ARG
66
178.08
-151.71
10
A
SER
67
-65.70
-151.08
10
A
ASP
69
-70.66
-153.00
10
A
SER
70
-125.66
-154.07
10
A
SER
71
159.55
-19.83
10
A
TYR
72
75.69
-48.90
10
A
ALA
74
-80.01
-150.73
10
A
ASP
78
-78.27
-151.55
10
A
PRO
104
-81.74
34.33
10
A
LYS
105
-162.59
-153.85
10
A
ARG
109
64.46
-58.85
10
A
LEU
114
-123.45
-55.36
10
A
PRO
124
-78.51
22.86
10
A
GLU
125
-168.15
-142.65
10
A
ASN
126
170.08
-51.87
10
A
ALA
127
-141.37
20.98
10
A
ASN
129
-47.17
164.31
model building
X-PLOR
3.851
refinement
X-PLOR
3.851
phasing
X-PLOR
3.851
THE NMR STRUCTURE OF THE RNA BINDING DOMAIN OF E.COLI RHO FACTOR SUGGESTS POSSIBLE RNA-PROTEIN INTERACTIONS, 10 STRUCTURES
1
Y
N
A
LEU
3
A
LEU
3
HELX_P
A
ASN
8
A
ASN
8
1
1
6
A
VAL
11
A
VAL
11
HELX_P
A
MET
21
A
MET
21
1
2
11
A
LEU
26
A
LEU
26
HELX_P
A
ARG
28
A
ARG
28
5
3
3
A
LYS
31
A
LYS
31
HELX_P
A
LYS
44
A
LYS
44
1
4
14
A
PRO
83
A
PRO
83
HELX_P
A
PHE
89
A
PHE
89
1
5
7
TRANSCRIPTION TERMINATION
TRANSCRIPTION TERMINATION, TERMINATION, RNA BINDING DOMAIN, TRANSCRIPTION REGULATION, OB FOLD
RHO_ECOLI
UNP
1
1
P03002
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIY
VSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATAL
IDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLI
NKLAMTKTNDDFFEMMKRS
1
130
1A63
1
130
P03002
A
1
1
130
3
2
anti-parallel
anti-parallel
anti-parallel
A
PHE
50
A
PHE
50
A
VAL
54
A
VAL
54
A
THR
96
A
THR
96
A
LYS
100
A
LYS
100
A
LYS
115
A
LYS
115
A
VAL
119
A
VAL
119
A
GLY
63
A
GLY
63
A
LEU
65
A
LEU
65
A
ILE
79
A
ILE
79
A
VAL
81
A
VAL
81
1
P 1