0.032258 0.000000 0.000000 0.000000 0.025523 0.000000 0.000000 0.000000 0.011973 0.00000 0.00000 0.00000 Binda, C. Coda, A. Mattevi, A. Aliverti, A. Zanetti, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 31.000 39.180 83.520 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking Fe2 S2 175.820 FE2/S2 (INORGANIC) CLUSTER non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 54 1353 1358 10.1107/S0907444998005137 10089511 Structure of the mutant E92K of [2Fe-2S] ferredoxin I from Spinacia oleracea at 1.7 A resolution. 1998 10.2210/pdb1a70/pdb pdb_00001a70 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 MIRRORS IMAGE PLATE 1996-06 MARRESEARCH GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 10488.470 FERREDOXIN E92K 1 man polymer 175.820 FE2/S2 (INORGANIC) CLUSTER 1 syn non-polymer 18.015 water 81 nat water no no AAYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAY PVSDVTIETHKKEELTA AAYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAY PVSDVTIETHKKEELTA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n spinach Spinacia Escherichia sample 3562 Spinacia oleracea 562 Escherichia coli 1 1.5 50 7.5 PROTEIN WAS CRYSTALLIZED FROM 2.6M AMMONIUM SULPHATE IN 50MM PHOSPHATE BUFFER, PH 7.5 database_2 software struct_conn struct_ref_seq_dif struct_site pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Refinement description Refinement description 1 0 1998-11-25 1 1 2008-03-24 1 2 2011-07-13 1 3 2021-11-03 1 4 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _software.name _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1998-03-19 REL REL FES FE2/S2 (INORGANIC) CLUSTER HOH water 1FRR PDB ENTRY 1FRR PDB experimental model FES 1602 2 FES FES 1602 A HOH 1 3 HOH HOH 1603 A HOH 2 3 HOH HOH 1604 A HOH 3 3 HOH HOH 1605 A HOH 4 3 HOH HOH 1606 A HOH 5 3 HOH HOH 1607 A HOH 6 3 HOH HOH 1608 A HOH 7 3 HOH HOH 1609 A HOH 8 3 HOH HOH 1610 A HOH 9 3 HOH HOH 1611 A HOH 10 3 HOH HOH 1612 A HOH 11 3 HOH HOH 1613 A HOH 12 3 HOH HOH 1614 A HOH 13 3 HOH HOH 1615 A HOH 14 3 HOH HOH 1616 A HOH 15 3 HOH HOH 1617 A HOH 16 3 HOH HOH 1618 A HOH 17 3 HOH HOH 1619 A HOH 18 3 HOH HOH 1620 A HOH 19 3 HOH HOH 1621 A HOH 20 3 HOH HOH 1622 A HOH 21 3 HOH HOH 1623 A HOH 22 3 HOH HOH 1624 A HOH 23 3 HOH HOH 1625 A HOH 24 3 HOH HOH 1626 A HOH 25 3 HOH HOH 1627 A HOH 26 3 HOH HOH 1628 A HOH 27 3 HOH HOH 1629 A HOH 28 3 HOH HOH 1630 A HOH 29 3 HOH HOH 1631 A HOH 30 3 HOH HOH 1632 A HOH 31 3 HOH HOH 1633 A HOH 32 3 HOH HOH 1634 A HOH 33 3 HOH HOH 1635 A HOH 34 3 HOH HOH 1636 A HOH 35 3 HOH HOH 1637 A HOH 36 3 HOH HOH 1638 A HOH 37 3 HOH HOH 1639 A HOH 38 3 HOH HOH 1640 A HOH 39 3 HOH HOH 1641 A HOH 40 3 HOH HOH 1642 A HOH 41 3 HOH HOH 1643 A HOH 42 3 HOH HOH 1644 A HOH 43 3 HOH HOH 1645 A HOH 44 3 HOH HOH 1646 A HOH 45 3 HOH HOH 1647 A HOH 46 3 HOH HOH 1648 A HOH 47 3 HOH HOH 1649 A HOH 48 3 HOH HOH 1650 A HOH 49 3 HOH HOH 1651 A HOH 50 3 HOH HOH 1652 A HOH 51 3 HOH HOH 1653 A HOH 52 3 HOH HOH 1654 A HOH 53 3 HOH HOH 1655 A HOH 54 3 HOH HOH 1656 A HOH 55 3 HOH HOH 1657 A HOH 56 3 HOH HOH 1658 A HOH 57 3 HOH HOH 1659 A HOH 58 3 HOH HOH 1660 A HOH 59 3 HOH HOH 1661 A HOH 60 3 HOH HOH 1662 A HOH 61 3 HOH HOH 1663 A HOH 62 3 HOH HOH 1664 A HOH 63 3 HOH HOH 1665 A HOH 64 3 HOH HOH 1666 A HOH 65 3 HOH HOH 1667 A HOH 66 3 HOH HOH 1668 A HOH 67 3 HOH HOH 1669 A HOH 68 3 HOH HOH 1670 A HOH 69 3 HOH HOH 1671 A HOH 70 3 HOH HOH 1672 A HOH 71 3 HOH HOH 1673 A HOH 72 3 HOH HOH 1674 A HOH 73 3 HOH HOH 1675 A HOH 74 3 HOH HOH 1676 A HOH 75 3 HOH HOH 1677 A HOH 76 3 HOH HOH 1678 A HOH 77 3 HOH HOH 1679 A HOH 78 3 HOH HOH 1680 A HOH 79 3 HOH HOH 1681 A HOH 80 3 HOH HOH 1682 A HOH 81 3 HOH HOH 1683 A ALA 1 n 1 ALA 1 A ALA 2 n 2 ALA 2 A TYR 3 n 3 TYR 3 A LYS 4 n 4 LYS 4 A VAL 5 n 5 VAL 5 A THR 6 n 6 THR 6 A LEU 7 n 7 LEU 7 A VAL 8 n 8 VAL 8 A THR 9 n 9 THR 9 A PRO 10 n 10 PRO 10 A THR 11 n 11 THR 11 A GLY 12 n 12 GLY 12 A ASN 13 n 13 ASN 13 A VAL 14 n 14 VAL 14 A GLU 15 n 15 GLU 15 A PHE 16 n 16 PHE 16 A GLN 17 n 17 GLN 17 A CYS 18 n 18 CYS 18 A PRO 19 n 19 PRO 19 A ASP 20 n 20 ASP 20 A ASP 21 n 21 ASP 21 A VAL 22 n 22 VAL 22 A TYR 23 n 23 TYR 23 A ILE 24 n 24 ILE 24 A LEU 25 n 25 LEU 25 A ASP 26 n 26 ASP 26 A ALA 27 n 27 ALA 27 A ALA 28 n 28 ALA 28 A GLU 29 n 29 GLU 29 A GLU 30 n 30 GLU 30 A GLU 31 n 31 GLU 31 A GLY 32 n 32 GLY 32 A ILE 33 n 33 ILE 33 A ASP 34 n 34 ASP 34 A LEU 35 n 35 LEU 35 A PRO 36 n 36 PRO 36 A TYR 37 n 37 TYR 37 A SER 38 n 38 SER 38 A CYS 39 n 39 CYS 39 A ARG 40 n 40 ARG 40 A ALA 41 n 41 ALA 41 A GLY 42 n 42 GLY 42 A SER 43 n 43 SER 43 A CYS 44 n 44 CYS 44 A SER 45 n 45 SER 45 A SER 46 n 46 SER 46 A CYS 47 n 47 CYS 47 A ALA 48 n 48 ALA 48 A GLY 49 n 49 GLY 49 A LYS 50 n 50 LYS 50 A LEU 51 n 51 LEU 51 A LYS 52 n 52 LYS 52 A THR 53 n 53 THR 53 A GLY 54 n 54 GLY 54 A SER 55 n 55 SER 55 A LEU 56 n 56 LEU 56 A ASN 57 n 57 ASN 57 A GLN 58 n 58 GLN 58 A ASP 59 n 59 ASP 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A SER 62 n 62 SER 62 A PHE 63 n 63 PHE 63 A LEU 64 n 64 LEU 64 A ASP 65 n 65 ASP 65 A ASP 66 n 66 ASP 66 A ASP 67 n 67 ASP 67 A GLN 68 n 68 GLN 68 A ILE 69 n 69 ILE 69 A ASP 70 n 70 ASP 70 A GLU 71 n 71 GLU 71 A GLY 72 n 72 GLY 72 A TRP 73 n 73 TRP 73 A VAL 74 n 74 VAL 74 A LEU 75 n 75 LEU 75 A THR 76 n 76 THR 76 A CYS 77 n 77 CYS 77 A ALA 78 n 78 ALA 78 A ALA 79 n 79 ALA 79 A TYR 80 n 80 TYR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A SER 83 n 83 SER 83 A ASP 84 n 84 ASP 84 A VAL 85 n 85 VAL 85 A THR 86 n 86 THR 86 A ILE 87 n 87 ILE 87 A GLU 88 n 88 GLU 88 A THR 89 n 89 THR 89 A HIS 90 n 90 HIS 90 A LYS 91 n 91 LYS 91 A LYS 92 n 92 LYS 92 A GLU 93 n 93 GLU 93 A GLU 94 n 94 GLU 94 A LEU 95 n 95 LEU 95 A THR 96 n 96 THR 96 A ALA 97 n 97 ALA 97 A 0.2010000 0.1960000 0.2590000 1176 10 author_defined_assembly 1 monomeric A CYS 39 A SG CYS 39 1_555 A FES 1602 B FE1 FES 1_555 A FES 1602 B S1 FES 1_555 116.8 A CYS 39 A SG CYS 39 1_555 A FES 1602 B FE1 FES 1_555 A FES 1602 B S2 FES 1_555 100.8 A FES 1602 B S1 FES 1_555 A FES 1602 B FE1 FES 1_555 A FES 1602 B S2 FES 1_555 104.5 A CYS 39 A SG CYS 39 1_555 A FES 1602 B FE1 FES 1_555 A CYS 44 A SG CYS 44 1_555 107.2 A FES 1602 B S1 FES 1_555 A FES 1602 B FE1 FES 1_555 A CYS 44 A SG CYS 44 1_555 108.3 A FES 1602 B S2 FES 1_555 A FES 1602 B FE1 FES 1_555 A CYS 44 A SG CYS 44 1_555 119.7 A CYS 47 A SG CYS 47 1_555 A FES 1602 B FE2 FES 1_555 A FES 1602 B S1 FES 1_555 113.0 A CYS 47 A SG CYS 47 1_555 A FES 1602 B FE2 FES 1_555 A FES 1602 B S2 FES 1_555 109.6 A FES 1602 B S1 FES 1_555 A FES 1602 B FE2 FES 1_555 A FES 1602 B S2 FES 1_555 105.4 A CYS 47 A SG CYS 47 1_555 A FES 1602 B FE2 FES 1_555 A CYS 77 A SG CYS 77 1_555 107.1 A FES 1602 B S1 FES 1_555 A FES 1602 B FE2 FES 1_555 A CYS 77 A SG CYS 77 1_555 122.0 A FES 1602 B S2 FES 1_555 A FES 1602 B FE2 FES 1_555 A CYS 77 A SG CYS 77 1_555 98.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLY 12 A O GLY 12 A N THR 9 A N THR 9 A O THR 6 A O THR 6 A N VAL 85 A N VAL 85 A O THR 86 A O THR 86 A N THR 53 A N THR 53 A O GLY 49 A O GLY 49 A N VAL 74 A N VAL 74 1 A CA ALA 1 WRONG HAND 1 -6.81 0.90 118.30 111.49 A A A CB CG OD2 ASP ASP ASP 20 20 20 N 1 6.09 0.90 118.30 124.39 A A A CB CG OD1 ASP ASP ASP 34 34 34 N 1 -5.90 0.90 118.30 112.40 A A A CB CG OD2 ASP ASP ASP 34 34 34 N 1 -4.73 0.50 120.30 115.57 A A A NE CZ NH2 ARG ARG ARG 40 40 40 N 1 -5.63 0.90 118.30 112.67 A A A CB CG OD2 ASP ASP ASP 59 59 59 N 1 5.68 0.90 118.30 123.98 A A A CB CG OD1 ASP ASP ASP 65 65 65 N 1 12.22 0.90 118.30 130.52 A A A CB CG OD1 ASP ASP ASP 84 84 84 N 1 -14.60 0.90 118.30 103.70 A A A CB CG OD2 ASP ASP ASP 84 84 84 N 1 A SER 38 -141.70 -77.42 0.2000000 0.1820000 0.2010000 0.1900000 1.7 100.0 1090 11755 11755 10.0 97.6 EVERY 10TH REFLECTION 1 TNT BCORREL V1.0 A POSTERIORI 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1FRR TNT PROTGEO BABINET SCALING 150 0.80 1.7 100.0 81 817 4 0 732 0.019 620 70 2.994 855 90 18.50 300 0.00 1 0.021 13 70 0.021 94 240 4.3 620 2.1 0.039 9 125 5.1 1.70 1A70 11755 2 0.0780000 0.1120000 1 10 2.5 97.6 0.2020000 1.7 1.8 2 0.3050000 2.5 68 phasing AMoRE refinement TNT 5D data reduction MOSFLM data scaling Agrovata SPINACH FERREDOXIN 1 N N 2 N N 3 N N A ILE 24 A ILE 24 HELX_P A GLU 30 A GLU 30 1 1 7 A ASP 66 A ASP 66 HELX_P A GLU 71 A GLU 71 1 2 6 A THR 76 A THR 76 HELX_P A ALA 78 A ALA 78 5 3 3 A LYS 92 A LYS 92 HELX_P A GLU 94 A GLU 94 5 4 3 metalc 2.318 A CYS 39 A SG CYS 39 1_555 A FES 1602 B FE1 FES 1_555 metalc 2.277 A CYS 44 A SG CYS 44 1_555 A FES 1602 B FE1 FES 1_555 metalc 2.361 A CYS 47 A SG CYS 47 1_555 A FES 1602 B FE2 FES 1_555 metalc 2.269 A CYS 77 A SG CYS 77 1_555 A FES 1602 B FE2 FES 1_555 IRON-SULFUR PROTEIN IRON-SULFUR PROTEIN, PHOTOSYNTHESIS, ELECTRON TRANSPORT FER1_SPIOL UNP 1 1 P00221 MAATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMTMAAYKVTLVTPTGNVEFQCPDDVYILDAAEE EGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKEEELTA 51 147 1A70 1 97 P00221 A 1 1 97 1 GLU engineered mutation LYS 92 1A70 A P00221 UNP 142 92 5 anti-parallel parallel anti-parallel anti-parallel A GLY 12 A GLY 12 A PRO 19 A PRO 19 A ALA 2 A ALA 2 A THR 9 A THR 9 A VAL 85 A VAL 85 A GLU 88 A GLU 88 A ALA 48 A ALA 48 A THR 53 A THR 53 A TRP 73 A TRP 73 A LEU 75 A LEU 75 BINDING SITE FOR RESIDUE FES A 1602 A FES 1602 Software 8 A SER 38 A SER 38 8 1_555 A CYS 39 A CYS 39 8 1_555 A ARG 40 A ARG 40 8 1_555 A GLY 42 A GLY 42 8 1_555 A SER 43 A SER 43 8 1_555 A CYS 44 A CYS 44 8 1_555 A CYS 47 A CYS 47 8 1_555 A CYS 77 A CYS 77 8 1_555 19 P 21 21 21