0.008795 0.005078 0.000000 0.000000 0.010156 0.000000 0.000000 0.000000 0.011312 0.00000 0.00000 0.00000 Flick, K.E. Monnat Junior, R.J. Stoddard, B.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 113.700 113.700 88.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N MG N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N N N 418 S C N 419 N C N 420 N O N 421 N C N 422 N C N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N N N 435 S C N 436 N C N 437 N O N 438 N C N 439 N O N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 R C N 453 N O N 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C Y 470 N C Y 471 N C Y 472 N C Y 473 N N Y 474 N C Y 475 N C Y 476 N C Y 477 N C Y 478 N C N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N N N 493 S C N 494 N C N 495 N O N 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C Y 502 N C N 503 N O N 504 N O N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N N N 517 S C N 518 N C N 519 N O N 520 N C N 521 N C N 522 N C N 523 N O N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing UK Nature NATUAS 0006 0028-0836 394 96 101 10.1038/27952 9665136 DNA binding and cleavage by the nuclear intron-encoded homing endonuclease I-PpoI. 1998 US Protein Sci. PRCIEI 0795 0961-8368 6 2677 Crystallization and Preliminary X-Ray Studies of I-Ppoi: A Nuclear, Intron- Encoded Homing Endonuclease from Physarum Polycephalum 1997 10.2210/pdb1a73/pdb pdb_00001a73 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 NONE CCD 1997-12-15 ADSC DOUBLE CRYSTAL M x-ray 1 1.0 5.0.2 ALS SYNCHROTRON ALS BEAMLINE 5.0.2 3916.571 DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3') ENDONUCLEASE I-PPOI BINDING SEQUENCE 2 syn polymer 2475.655 DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3') ENDONUCLEASE I-PPOI BINDING SEQUENCE 2 syn polymer 17811.242 INTRON 3 (I-PPO) ENCODED ENDONUCLEASE ENDONUCLEASE (I-PPO) ENCODED ENDONUCLEASE 2 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 65.409 ZINC ION 4 syn non-polymer 18.015 water 391 nat water INTRON-ENCODED ENDONUCLEASE I-PPOI no no (DT)(DT)(DG)(DA)(DC)(DT)(DC)(DT)(DC)(DT)(DT)(DA)(DA) TTGACTCTCTTAA C,E polydeoxyribonucleotide no no (DG)(DA)(DG)(DA)(DG)(DT)(DC)(DA) GAGAGTCA D,F polydeoxyribonucleotide no no MALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYGVGFAKNGPTRWQYKRTINQVVHRWGSHTV PFLLEPDNINGKTCTASHLCHNTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATVAGPQQRGSH FVV MALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYGVGFAKNGPTRWQYKRTINQVVHRWGSHTV PFLLEPDNINGKTCTASHLCHNTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATVAGPQQRGSH FVV A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Physarum Escherichia Escherichia coli sample NUCLEUS 5791 Physarum polycephalum 469008 Escherichia coli BL21(DE3) BL21 (DE3) PET 1 3.4 60 VAPOR DIFFUSION, HANGING DROP 5.6 THE CRYSTALS WERE GROWN FROM A 2:1 MOLAR RATIO SOLUTION OF PROTEIN AND DNA SUPPLEMENTED WITH 2.5 MM EDTA AND 5 MM SPERMINE. THE COMPLEX WAS CRYSTALLIZED FROM 21 - 27% PEG 4000, 0.1 M CITRATE, PH 5.4 - 5.8, 20 MM NACL, 2 MM EDTA., pH 5.6, VAPOR DIFFUSION, HANGING DROP 5.4-5.8 EDTA 1 SPERMINE 1 PEG 4000 1 NACL 1 SODIUM CITRATE 1 PEG 4000 2 -11.747 1 20 C 2 F 21 5.229 C_DT2:DA21_F 1 -10.120 0.123 -0.210 0.003 -2.852 1 19 C 3 F 20 3.194 C_DG3:DC20_F 2 -4.977 -0.366 -0.193 -0.004 10.312 1 20 C 4 F 19 -2.308 C_DA4:DT19_F 3 -3.733 0.140 0.194 -0.036 6.121 1 19 C 5 F 18 -0.279 C_DC5:DG18_F 4 -14.826 0.324 0.052 -0.063 -0.017 1 20 C 6 F 17 2.096 C_DT6:DA17_F 5 -10.769 -0.167 -0.087 -0.139 -0.091 1 19 C 7 F 16 1.654 C_DC7:DG16_F 6 -0.565 0.428 -0.315 -0.112 26.565 1 20 C 8 F 15 1.321 C_DT8:DA15_F 7 0.461 -0.310 -0.628 0.002 12.146 1 19 C 9 F 14 0.311 C_DC9:DG14_F 8 -8.970 0.384 -0.249 -0.099 0.172 1 20 C 10 E 13 1.088 C_DT10:DA13_E 9 -17.023 -0.140 0.030 -0.088 -3.811 1 20 C 11 E 12 5.969 C_DT11:DA12_E 10 -11.216 -0.194 -0.085 -0.119 4.887 1 20 C 12 E 11 3.668 C_DA12:DT11_E 11 -12.546 0.290 -0.066 -0.177 -1.689 1 20 C 13 E 10 1.457 C_DA13:DT10_E 12 -15.170 0.133 0.053 -0.114 -9.524 1 19 D 14 E 9 -0.524 D_DG14:DC9_E 13 -7.951 -0.247 -0.206 -0.113 -24.422 1 20 D 15 E 8 1.054 D_DA15:DT8_E 14 -0.179 0.175 -0.501 -0.048 -3.690 1 19 D 16 E 7 1.527 D_DG16:DC7_E 15 -7.583 -0.066 0.239 -0.181 -3.141 1 20 D 17 E 6 3.937 D_DA17:DT6_E 16 -10.025 0.048 -0.138 -0.144 -6.575 1 19 D 18 E 5 3.261 D_DG18:DC5_E 17 -14.224 -0.412 -0.010 -0.027 -11.626 1 20 D 19 E 4 1.666 D_DT19:DA4_E 18 -5.482 -0.186 0.173 -0.102 -5.705 1 19 D 20 E 3 2.659 D_DC20:DG3_E 19 -2.726 0.621 0.119 -0.214 -3.653 1 20 D 21 E 2 5.997 D_DA21:DT2_E 20 -7.352 0.141 -0.172 -0.107 3.271 29.581 C C 2 3 17.351 F F 21 20 3.196 8.725 -0.390 0.667 CC_DT2DG3:DC20DA21_FF 1 -2.063 4.103 28.218 -0.566 0.321 3.038 29.600 C C 3 4 11.849 F F 20 19 3.074 5.999 -0.341 0.033 CC_DG3DA4:DT19DC20_FF 2 -3.598 7.107 28.780 -1.138 -0.054 3.611 31.612 C C 4 5 -8.499 F F 19 18 3.488 -4.612 0.903 -0.823 CC_DA4DC5:DG18DT19_FF 3 1.625 -2.995 31.241 -0.579 -1.328 3.486 36.680 C C 5 6 2.926 F F 18 17 3.500 1.838 0.685 -1.280 CC_DC5DT6:DA17DG18_FF 4 3.872 -6.165 36.437 -2.304 -0.521 3.051 29.540 C C 6 7 11.776 F F 17 16 3.407 5.960 0.007 -1.423 CC_DT6DC7:DG16DA17_FF 5 2.122 -4.193 28.870 -4.055 0.436 2.669 27.027 C C 7 8 10.590 F F 16 15 2.876 4.922 0.246 -0.924 CC_DC7DT8:DA15DG16_FF 6 0.626 -1.347 26.576 -3.047 -0.390 3.712 33.163 C C 8 9 4.809 F F 15 14 3.878 2.693 -0.727 -2.296 CC_DT8DC9:DG14DA15_FF 7 -10.880 19.425 31.261 -4.564 -0.914 3.528 24.805 C C 9 10 9.848 F E 14 13 3.703 4.156 -1.486 -2.347 CC_DC9DT10:DA13DG14_EF 8 -6.906 16.365 23.478 -6.892 1.087 3.246 36.967 C C 10 11 5.853 E E 13 12 3.251 3.703 0.245 0.010 CC_DT10DT11:DA12DA13_EE 9 2.693 -4.257 36.692 -0.482 -0.024 3.467 31.310 C C 11 12 23.737 E E 12 11 3.195 12.468 -0.033 1.350 CC_DT11DA12:DT11DA12_EE 10 -1.305 2.484 28.749 -0.004 -0.201 3.294 36.101 C C 12 13 4.080 E E 11 10 3.294 2.525 -0.275 -0.050 CC_DA12DA13:DT10DT11_EE 11 -2.399 3.877 35.938 -0.441 0.102 3.587 26.439 C D 13 14 6.048 E E 10 9 3.614 2.733 1.323 -2.179 CD_DA13DG14:DC9DT10_EE 12 6.565 -14.526 25.481 -5.579 -0.935 3.951 32.226 D D 14 15 -1.380 E E 9 8 3.875 -0.753 0.694 -2.243 DD_DG14DA15:DT8DC9_EE 13 10.162 -18.610 30.613 -3.876 0.973 3.115 30.009 D D 15 16 -5.437 E E 8 7 3.018 -2.811 -0.102 -1.174 DD_DA15DG16:DC7DT8_EE 14 -1.275 2.467 29.853 -1.725 -0.050 2.824 27.961 D D 16 17 16.255 E E 7 6 3.376 7.703 0.483 -1.671 DD_DG16DA17:DT6DC7_EE 15 5.589 -11.795 26.321 -5.246 0.298 3.310 36.676 D D 17 18 3.955 E E 6 5 3.385 2.483 -0.288 -1.217 DD_DA17DG18:DC5DT6_EE 16 -3.587 5.714 36.425 -2.283 -0.047 3.618 33.465 D D 18 19 -9.944 E E 5 4 3.485 -5.696 -0.834 -0.833 DD_DG18DT19:DA4DC5_EE 17 -2.075 3.622 32.927 -0.417 1.074 3.218 32.636 D D 19 20 3.363 E E 4 3 3.253 1.889 0.195 -0.442 DD_DT19DC20:DG3DA4_EE 18 -0.681 1.213 32.575 -1.110 -0.464 3.125 31.398 D D 20 21 8.201 E E 3 2 3.260 4.412 0.038 -0.596 DD_DC20DA21:DT2DG3_EE 19 4.144 -7.704 30.823 -1.918 0.696 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle software struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 1998-10-14 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _software.name _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1998-03-19 REL MG MAGNESIUM ION ZN ZINC ION HOH water ADENOSINES C 21 AND D 21 ARE SITES OF ENDONUCLEASE CLEAVAGE MG 205 4 MG MG 205 E ZN 201 5 ZN ZN 201 A ZN 202 5 ZN ZN 202 A ZN 203 5 ZN ZN 203 B ZN 204 5 ZN ZN 204 B MG 206 4 MG MG 206 B HOH 303 6 HOH HOH 303 C HOH 308 6 HOH HOH 308 C HOH 339 6 HOH HOH 339 C HOH 347 6 HOH HOH 347 C HOH 351 6 HOH HOH 351 C HOH 354 6 HOH HOH 354 C HOH 386 6 HOH HOH 386 C HOH 388 6 HOH HOH 388 C HOH 396 6 HOH HOH 396 C HOH 434 6 HOH HOH 434 C HOH 436 6 HOH HOH 436 C HOH 447 6 HOH HOH 447 C HOH 468 6 HOH HOH 468 C HOH 470 6 HOH HOH 470 C HOH 479 6 HOH HOH 479 C HOH 482 6 HOH HOH 482 C HOH 497 6 HOH HOH 497 C HOH 544 6 HOH HOH 544 C HOH 553 6 HOH HOH 553 C HOH 557 6 HOH HOH 557 C HOH 595 6 HOH HOH 595 C HOH 607 6 HOH HOH 607 C HOH 612 6 HOH HOH 612 C HOH 622 6 HOH HOH 622 C HOH 648 6 HOH HOH 648 C HOH 666 6 HOH HOH 666 C HOH 668 6 HOH HOH 668 C HOH 670 6 HOH HOH 670 C HOH 684 6 HOH HOH 684 C HOH 353 6 HOH HOH 353 D HOH 389 6 HOH HOH 389 D HOH 392 6 HOH HOH 392 D HOH 395 6 HOH HOH 395 D HOH 405 6 HOH HOH 405 D HOH 481 6 HOH HOH 481 D HOH 554 6 HOH HOH 554 D HOH 583 6 HOH HOH 583 D HOH 587 6 HOH HOH 587 D HOH 596 6 HOH HOH 596 D HOH 630 6 HOH HOH 630 D HOH 641 6 HOH HOH 641 D HOH 649 6 HOH HOH 649 D HOH 659 6 HOH HOH 659 D HOH 304 6 HOH HOH 304 E HOH 322 6 HOH HOH 322 E HOH 333 6 HOH HOH 333 E HOH 341 6 HOH HOH 341 E HOH 350 6 HOH HOH 350 E HOH 369 6 HOH HOH 369 E HOH 372 6 HOH HOH 372 E HOH 375 6 HOH HOH 375 E HOH 385 6 HOH HOH 385 E HOH 444 6 HOH HOH 444 E HOH 450 6 HOH HOH 450 E HOH 456 6 HOH HOH 456 E HOH 462 6 HOH HOH 462 E HOH 469 6 HOH HOH 469 E HOH 483 6 HOH HOH 483 E HOH 500 6 HOH HOH 500 E HOH 517 6 HOH HOH 517 E HOH 533 6 HOH HOH 533 E HOH 545 6 HOH HOH 545 E HOH 555 6 HOH HOH 555 E HOH 564 6 HOH HOH 564 E HOH 570 6 HOH HOH 570 E HOH 571 6 HOH HOH 571 E HOH 574 6 HOH HOH 574 E HOH 584 6 HOH HOH 584 E HOH 589 6 HOH HOH 589 E HOH 611 6 HOH HOH 611 E HOH 618 6 HOH HOH 618 E HOH 620 6 HOH HOH 620 E HOH 624 6 HOH HOH 624 E HOH 644 6 HOH HOH 644 E HOH 645 6 HOH HOH 645 E HOH 647 6 HOH HOH 647 E HOH 305 6 HOH HOH 305 F HOH 317 6 HOH HOH 317 F HOH 366 6 HOH HOH 366 F HOH 403 6 HOH HOH 403 F HOH 423 6 HOH HOH 423 F HOH 426 6 HOH HOH 426 F HOH 473 6 HOH HOH 473 F HOH 512 6 HOH HOH 512 F HOH 513 6 HOH HOH 513 F HOH 538 6 HOH HOH 538 F HOH 539 6 HOH HOH 539 F HOH 547 6 HOH HOH 547 F HOH 573 6 HOH HOH 573 F HOH 594 6 HOH HOH 594 F HOH 616 6 HOH HOH 616 F HOH 635 6 HOH HOH 635 F HOH 637 6 HOH HOH 637 F HOH 646 6 HOH HOH 646 F HOH 663 6 HOH HOH 663 F HOH 679 6 HOH HOH 679 F HOH 681 6 HOH HOH 681 F HOH 306 6 HOH HOH 306 A HOH 309 6 HOH HOH 309 A HOH 314 6 HOH HOH 314 A HOH 315 6 HOH HOH 315 A HOH 318 6 HOH HOH 318 A HOH 319 6 HOH HOH 319 A HOH 320 6 HOH HOH 320 A HOH 321 6 HOH HOH 321 A HOH 324 6 HOH HOH 324 A HOH 327 6 HOH HOH 327 A HOH 328 6 HOH HOH 328 A HOH 329 6 HOH HOH 329 A HOH 330 6 HOH HOH 330 A HOH 331 6 HOH HOH 331 A HOH 332 6 HOH HOH 332 A HOH 334 6 HOH HOH 334 A HOH 335 6 HOH HOH 335 A HOH 336 6 HOH HOH 336 A HOH 342 6 HOH HOH 342 A HOH 343 6 HOH HOH 343 A HOH 344 6 HOH HOH 344 A HOH 345 6 HOH HOH 345 A HOH 348 6 HOH HOH 348 A HOH 355 6 HOH HOH 355 A HOH 357 6 HOH HOH 357 A HOH 358 6 HOH HOH 358 A HOH 361 6 HOH HOH 361 A HOH 364 6 HOH HOH 364 A HOH 365 6 HOH HOH 365 A HOH 367 6 HOH HOH 367 A HOH 368 6 HOH HOH 368 A HOH 374 6 HOH HOH 374 A HOH 382 6 HOH HOH 382 A HOH 384 6 HOH HOH 384 A HOH 387 6 HOH HOH 387 A HOH 394 6 HOH HOH 394 A HOH 398 6 HOH HOH 398 A HOH 400 6 HOH HOH 400 A HOH 401 6 HOH HOH 401 A HOH 407 6 HOH HOH 407 A HOH 409 6 HOH HOH 409 A HOH 411 6 HOH HOH 411 A HOH 412 6 HOH HOH 412 A HOH 413 6 HOH HOH 413 A HOH 415 6 HOH HOH 415 A HOH 416 6 HOH HOH 416 A HOH 419 6 HOH HOH 419 A HOH 420 6 HOH HOH 420 A HOH 421 6 HOH HOH 421 A HOH 427 6 HOH HOH 427 A HOH 429 6 HOH HOH 429 A HOH 430 6 HOH HOH 430 A HOH 431 6 HOH HOH 431 A HOH 432 6 HOH HOH 432 A HOH 438 6 HOH HOH 438 A HOH 440 6 HOH HOH 440 A HOH 441 6 HOH HOH 441 A HOH 442 6 HOH HOH 442 A HOH 445 6 HOH HOH 445 A HOH 446 6 HOH HOH 446 A HOH 448 6 HOH HOH 448 A HOH 452 6 HOH HOH 452 A HOH 453 6 HOH HOH 453 A HOH 461 6 HOH HOH 461 A HOH 463 6 HOH HOH 463 A HOH 464 6 HOH HOH 464 A HOH 465 6 HOH HOH 465 A HOH 466 6 HOH HOH 466 A HOH 467 6 HOH HOH 467 A HOH 474 6 HOH HOH 474 A HOH 475 6 HOH HOH 475 A HOH 480 6 HOH HOH 480 A HOH 486 6 HOH HOH 486 A HOH 492 6 HOH HOH 492 A HOH 494 6 HOH HOH 494 A HOH 495 6 HOH HOH 495 A HOH 505 6 HOH HOH 505 A HOH 508 6 HOH HOH 508 A HOH 511 6 HOH HOH 511 A HOH 514 6 HOH HOH 514 A HOH 515 6 HOH HOH 515 A HOH 516 6 HOH HOH 516 A HOH 519 6 HOH HOH 519 A HOH 520 6 HOH HOH 520 A HOH 521 6 HOH HOH 521 A HOH 525 6 HOH HOH 525 A HOH 529 6 HOH HOH 529 A HOH 530 6 HOH HOH 530 A HOH 534 6 HOH HOH 534 A HOH 537 6 HOH HOH 537 A HOH 541 6 HOH HOH 541 A HOH 561 6 HOH HOH 561 A HOH 562 6 HOH HOH 562 A HOH 563 6 HOH HOH 563 A HOH 566 6 HOH HOH 566 A HOH 572 6 HOH HOH 572 A HOH 577 6 HOH HOH 577 A HOH 578 6 HOH HOH 578 A HOH 579 6 HOH HOH 579 A HOH 586 6 HOH HOH 586 A HOH 588 6 HOH HOH 588 A HOH 590 6 HOH HOH 590 A HOH 591 6 HOH HOH 591 A HOH 597 6 HOH HOH 597 A HOH 598 6 HOH HOH 598 A HOH 599 6 HOH HOH 599 A HOH 603 6 HOH HOH 603 A HOH 608 6 HOH HOH 608 A HOH 610 6 HOH HOH 610 A HOH 613 6 HOH HOH 613 A HOH 615 6 HOH HOH 615 A HOH 617 6 HOH HOH 617 A HOH 623 6 HOH HOH 623 A HOH 627 6 HOH HOH 627 A HOH 628 6 HOH HOH 628 A HOH 629 6 HOH HOH 629 A HOH 632 6 HOH HOH 632 A HOH 633 6 HOH HOH 633 A HOH 636 6 HOH HOH 636 A HOH 638 6 HOH HOH 638 A HOH 640 6 HOH HOH 640 A HOH 655 6 HOH HOH 655 A HOH 656 6 HOH HOH 656 A HOH 657 6 HOH HOH 657 A HOH 658 6 HOH HOH 658 A HOH 661 6 HOH HOH 661 A HOH 662 6 HOH HOH 662 A HOH 665 6 HOH HOH 665 A HOH 672 6 HOH HOH 672 A HOH 675 6 HOH HOH 675 A HOH 676 6 HOH HOH 676 A HOH 677 6 HOH HOH 677 A HOH 678 6 HOH HOH 678 A HOH 691 6 HOH HOH 691 A HOH 301 6 HOH HOH 301 B HOH 302 6 HOH HOH 302 B HOH 307 6 HOH HOH 307 B HOH 310 6 HOH HOH 310 B HOH 311 6 HOH HOH 311 B HOH 312 6 HOH HOH 312 B HOH 313 6 HOH HOH 313 B HOH 316 6 HOH HOH 316 B HOH 323 6 HOH HOH 323 B HOH 325 6 HOH HOH 325 B HOH 326 6 HOH HOH 326 B HOH 337 6 HOH HOH 337 B HOH 338 6 HOH HOH 338 B HOH 340 6 HOH HOH 340 B HOH 346 6 HOH HOH 346 B HOH 349 6 HOH HOH 349 B HOH 352 6 HOH HOH 352 B HOH 356 6 HOH HOH 356 B HOH 359 6 HOH HOH 359 B HOH 360 6 HOH HOH 360 B HOH 362 6 HOH HOH 362 B HOH 363 6 HOH HOH 363 B HOH 370 6 HOH HOH 370 B HOH 371 6 HOH HOH 371 B HOH 373 6 HOH HOH 373 B HOH 376 6 HOH HOH 376 B HOH 377 6 HOH HOH 377 B HOH 378 6 HOH HOH 378 B HOH 379 6 HOH HOH 379 B HOH 380 6 HOH HOH 380 B HOH 381 6 HOH HOH 381 B HOH 383 6 HOH HOH 383 B HOH 390 6 HOH HOH 390 B HOH 391 6 HOH HOH 391 B HOH 393 6 HOH HOH 393 B HOH 397 6 HOH HOH 397 B HOH 399 6 HOH HOH 399 B HOH 402 6 HOH HOH 402 B HOH 404 6 HOH HOH 404 B HOH 406 6 HOH HOH 406 B HOH 408 6 HOH HOH 408 B HOH 410 6 HOH HOH 410 B HOH 414 6 HOH HOH 414 B HOH 417 6 HOH HOH 417 B HOH 418 6 HOH HOH 418 B HOH 422 6 HOH HOH 422 B HOH 424 6 HOH HOH 424 B HOH 425 6 HOH HOH 425 B HOH 428 6 HOH HOH 428 B HOH 433 6 HOH HOH 433 B HOH 435 6 HOH HOH 435 B HOH 437 6 HOH HOH 437 B HOH 439 6 HOH HOH 439 B HOH 443 6 HOH HOH 443 B HOH 449 6 HOH HOH 449 B HOH 451 6 HOH HOH 451 B HOH 454 6 HOH HOH 454 B HOH 455 6 HOH HOH 455 B HOH 457 6 HOH HOH 457 B HOH 458 6 HOH HOH 458 B HOH 459 6 HOH HOH 459 B HOH 460 6 HOH HOH 460 B HOH 471 6 HOH HOH 471 B HOH 472 6 HOH HOH 472 B HOH 476 6 HOH HOH 476 B HOH 477 6 HOH HOH 477 B HOH 478 6 HOH HOH 478 B HOH 484 6 HOH HOH 484 B HOH 485 6 HOH HOH 485 B HOH 487 6 HOH HOH 487 B HOH 488 6 HOH HOH 488 B HOH 489 6 HOH HOH 489 B HOH 490 6 HOH HOH 490 B HOH 491 6 HOH HOH 491 B HOH 493 6 HOH HOH 493 B HOH 496 6 HOH HOH 496 B HOH 498 6 HOH HOH 498 B HOH 499 6 HOH HOH 499 B HOH 501 6 HOH HOH 501 B HOH 502 6 HOH HOH 502 B HOH 503 6 HOH HOH 503 B HOH 504 6 HOH HOH 504 B HOH 506 6 HOH HOH 506 B HOH 507 6 HOH HOH 507 B HOH 509 6 HOH HOH 509 B HOH 510 6 HOH HOH 510 B HOH 518 6 HOH HOH 518 B HOH 522 6 HOH HOH 522 B HOH 523 6 HOH HOH 523 B HOH 524 6 HOH HOH 524 B HOH 526 6 HOH HOH 526 B HOH 527 6 HOH HOH 527 B HOH 528 6 HOH HOH 528 B HOH 531 6 HOH HOH 531 B HOH 532 6 HOH HOH 532 B HOH 535 6 HOH HOH 535 B HOH 536 6 HOH HOH 536 B HOH 540 6 HOH HOH 540 B HOH 542 6 HOH HOH 542 B HOH 543 6 HOH HOH 543 B HOH 546 6 HOH HOH 546 B HOH 548 6 HOH HOH 548 B HOH 549 6 HOH HOH 549 B HOH 550 6 HOH HOH 550 B HOH 551 6 HOH HOH 551 B HOH 552 6 HOH HOH 552 B HOH 556 6 HOH HOH 556 B HOH 558 6 HOH HOH 558 B HOH 559 6 HOH HOH 559 B HOH 560 6 HOH HOH 560 B HOH 565 6 HOH HOH 565 B HOH 567 6 HOH HOH 567 B HOH 568 6 HOH HOH 568 B HOH 569 6 HOH HOH 569 B HOH 575 6 HOH HOH 575 B HOH 576 6 HOH HOH 576 B HOH 580 6 HOH HOH 580 B HOH 581 6 HOH HOH 581 B HOH 582 6 HOH HOH 582 B HOH 585 6 HOH HOH 585 B HOH 592 6 HOH HOH 592 B HOH 593 6 HOH HOH 593 B HOH 600 6 HOH HOH 600 B HOH 601 6 HOH HOH 601 B HOH 602 6 HOH HOH 602 B HOH 604 6 HOH HOH 604 B HOH 605 6 HOH HOH 605 B HOH 606 6 HOH HOH 606 B HOH 609 6 HOH HOH 609 B HOH 614 6 HOH HOH 614 B HOH 619 6 HOH HOH 619 B HOH 621 6 HOH HOH 621 B HOH 625 6 HOH HOH 625 B HOH 626 6 HOH HOH 626 B HOH 631 6 HOH HOH 631 B HOH 634 6 HOH HOH 634 B HOH 639 6 HOH HOH 639 B HOH 642 6 HOH HOH 642 B HOH 643 6 HOH HOH 643 B HOH 650 6 HOH HOH 650 B HOH 651 6 HOH HOH 651 B HOH 652 6 HOH HOH 652 B HOH 653 6 HOH HOH 653 B HOH 654 6 HOH HOH 654 B HOH 660 6 HOH HOH 660 B HOH 664 6 HOH HOH 664 B HOH 667 6 HOH HOH 667 B HOH 669 6 HOH HOH 669 B HOH 671 6 HOH HOH 671 B HOH 673 6 HOH HOH 673 B HOH 674 6 HOH HOH 674 B HOH 680 6 HOH HOH 680 B HOH 682 6 HOH HOH 682 B HOH 683 6 HOH HOH 683 B HOH 685 6 HOH HOH 685 B HOH 686 6 HOH HOH 686 B HOH 687 6 HOH HOH 687 B HOH 688 6 HOH HOH 688 B HOH 689 6 HOH HOH 689 B HOH 690 6 HOH HOH 690 B T 1 n 1 DT 1 C T 2 n 2 DT 2 C G 3 n 3 DG 3 C A 4 n 4 DA 4 C C 5 n 5 DC 5 C T 6 n 6 DT 6 C C 7 n 7 DC 7 C T 8 n 8 DT 8 C C 9 n 9 DC 9 C T 10 n 10 DT 10 C T 11 n 11 DT 11 C A 12 n 12 DA 12 C A 13 n 13 DA 13 C G 14 n 1 DG 14 D A 15 n 2 DA 15 D G 16 n 3 DG 16 D A 17 n 4 DA 17 D G 18 n 5 DG 18 D T 19 n 6 DT 19 D C 20 n 7 DC 20 D A 21 n 8 DA 21 D T 1 n 1 DT 1 E T 2 n 2 DT 2 E G 3 n 3 DG 3 E A 4 n 4 DA 4 E C 5 n 5 DC 5 E T 6 n 6 DT 6 E C 7 n 7 DC 7 E T 8 n 8 DT 8 E C 9 n 9 DC 9 E T 10 n 10 DT 10 E T 11 n 11 DT 11 E A 12 n 12 DA 12 E A 13 n 13 DA 13 E G 14 n 1 DG 14 F A 15 n 2 DA 15 F G 16 n 3 DG 16 F A 17 n 4 DA 17 F G 18 n 5 DG 18 F T 19 n 6 DT 19 F C 20 n 7 DC 20 F A 21 n 8 DA 21 F n 1 1 A ALA 2 n 2 ALA 2 A LEU 3 n 3 LEU 3 A THR 4 n 4 THR 4 A ASN 5 n 5 ASN 5 A ALA 6 n 6 ALA 6 A GLN 7 n 7 GLN 7 A ILE 8 n 8 ILE 8 A LEU 9 n 9 LEU 9 A ALA 10 n 10 ALA 10 A VAL 11 n 11 VAL 11 A ILE 12 n 12 ILE 12 A ASP 13 n 13 ASP 13 A SER 14 n 14 SER 14 A TRP 15 n 15 TRP 15 A GLU 16 n 16 GLU 16 A GLU 17 n 17 GLU 17 A THR 18 n 18 THR 18 A VAL 19 n 19 VAL 19 A GLY 20 n 20 GLY 20 A GLN 21 n 21 GLN 21 A PHE 22 n 22 PHE 22 A PRO 23 n 23 PRO 23 A VAL 24 n 24 VAL 24 A ILE 25 n 25 ILE 25 A THR 26 n 26 THR 26 A HIS 27 n 27 HIS 27 A HIS 28 n 28 HIS 28 A VAL 29 n 29 VAL 29 A PRO 30 n 30 PRO 30 A LEU 31 n 31 LEU 31 A GLY 32 n 32 GLY 32 A GLY 33 n 33 GLY 33 A GLY 34 n 34 GLY 34 A LEU 35 n 35 LEU 35 A GLN 36 n 36 GLN 36 A GLY 37 n 37 GLY 37 A THR 38 n 38 THR 38 A LEU 39 n 39 LEU 39 A HIS 40 n 40 HIS 40 A CYS 41 n 41 CYS 41 A TYR 42 n 42 TYR 42 A GLU 43 n 43 GLU 43 A ILE 44 n 44 ILE 44 A PRO 45 n 45 PRO 45 A LEU 46 n 46 LEU 46 A ALA 47 n 47 ALA 47 A ALA 48 n 48 ALA 48 A PRO 49 n 49 PRO 49 A TYR 50 n 50 TYR 50 A GLY 51 n 51 GLY 51 A VAL 52 n 52 VAL 52 A GLY 53 n 53 GLY 53 A PHE 54 n 54 PHE 54 A ALA 55 n 55 ALA 55 A LYS 56 n 56 LYS 56 A ASN 57 n 57 ASN 57 A GLY 58 n 58 GLY 58 A PRO 59 n 59 PRO 59 A THR 60 n 60 THR 60 A ARG 61 n 61 ARG 61 A TRP 62 n 62 TRP 62 A GLN 63 n 63 GLN 63 A TYR 64 n 64 TYR 64 A LYS 65 n 65 LYS 65 A ARG 66 n 66 ARG 66 A THR 67 n 67 THR 67 A ILE 68 n 68 ILE 68 A ASN 69 n 69 ASN 69 A GLN 70 n 70 GLN 70 A VAL 71 n 71 VAL 71 A VAL 72 n 72 VAL 72 A HIS 73 n 73 HIS 73 A ARG 74 n 74 ARG 74 A TRP 75 n 75 TRP 75 A GLY 76 n 76 GLY 76 A SER 77 n 77 SER 77 A HIS 78 n 78 HIS 78 A THR 79 n 79 THR 79 A VAL 80 n 80 VAL 80 A PRO 81 n 81 PRO 81 A PHE 82 n 82 PHE 82 A LEU 83 n 83 LEU 83 A LEU 84 n 84 LEU 84 A GLU 85 n 85 GLU 85 A PRO 86 n 86 PRO 86 A ASP 87 n 87 ASP 87 A ASN 88 n 88 ASN 88 A ILE 89 n 89 ILE 89 A ASN 90 n 90 ASN 90 A GLY 91 n 91 GLY 91 A LYS 92 n 92 LYS 92 A THR 93 n 93 THR 93 A CYS 94 n 94 CYS 94 A THR 95 n 95 THR 95 A ALA 96 n 96 ALA 96 A SER 97 n 97 SER 97 A HIS 98 n 98 HIS 98 A LEU 99 n 99 LEU 99 A CYS 100 n 100 CYS 100 A HIS 101 n 101 HIS 101 A ASN 102 n 102 ASN 102 A THR 103 n 103 THR 103 A ARG 104 n 104 ARG 104 A CYS 105 n 105 CYS 105 A HIS 106 n 106 HIS 106 A ASN 107 n 107 ASN 107 A PRO 108 n 108 PRO 108 A LEU 109 n 109 LEU 109 A HIS 110 n 110 HIS 110 A LEU 111 n 111 LEU 111 A CYS 112 n 112 CYS 112 A TRP 113 n 113 TRP 113 A GLU 114 n 114 GLU 114 A SER 115 n 115 SER 115 A LEU 116 n 116 LEU 116 A ASP 117 n 117 ASP 117 A ASP 118 n 118 ASP 118 A ASN 119 n 119 ASN 119 A LYS 120 n 120 LYS 120 A GLY 121 n 121 GLY 121 A ARG 122 n 122 ARG 122 A ASN 123 n 123 ASN 123 A TRP 124 n 124 TRP 124 A CYS 125 n 125 CYS 125 A PRO 126 n 126 PRO 126 A GLY 127 n 127 GLY 127 A PRO 128 n 128 PRO 128 A ASN 129 n 129 ASN 129 A GLY 130 n 130 GLY 130 A GLY 131 n 131 GLY 131 A CYS 132 n 132 CYS 132 A VAL 133 n 133 VAL 133 A HIS 134 n 134 HIS 134 A ALA 135 n 135 ALA 135 A VAL 136 n 136 VAL 136 A VAL 137 n 137 VAL 137 A CYS 138 n 138 CYS 138 A LEU 139 n 139 LEU 139 A ARG 140 n 140 ARG 140 A GLN 141 n 141 GLN 141 A GLY 142 n 142 GLY 142 A PRO 143 n 143 PRO 143 A LEU 144 n 144 LEU 144 A TYR 145 n 145 TYR 145 A GLY 146 n 146 GLY 146 A PRO 147 n 147 PRO 147 A GLY 148 n 148 GLY 148 A ALA 149 n 149 ALA 149 A THR 150 n 150 THR 150 A VAL 151 n 151 VAL 151 A ALA 152 n 152 ALA 152 A GLY 153 n 153 GLY 153 A PRO 154 n 154 PRO 154 A GLN 155 n 155 GLN 155 A GLN 156 n 156 GLN 156 A ARG 157 n 157 ARG 157 A GLY 158 n 158 GLY 158 A SER 159 n 159 SER 159 A HIS 160 n 160 HIS 160 A PHE 161 n 161 PHE 161 A VAL 162 n 162 VAL 162 A VAL 163 n 163 VAL 163 A n 1 1 B ALA 2 n 2 ALA 2 B LEU 3 n 3 LEU 3 B THR 4 n 4 THR 4 B ASN 5 n 5 ASN 5 B ALA 6 n 6 ALA 6 B GLN 7 n 7 GLN 7 B ILE 8 n 8 ILE 8 B LEU 9 n 9 LEU 9 B ALA 10 n 10 ALA 10 B VAL 11 n 11 VAL 11 B ILE 12 n 12 ILE 12 B ASP 13 n 13 ASP 13 B SER 14 n 14 SER 14 B TRP 15 n 15 TRP 15 B GLU 16 n 16 GLU 16 B GLU 17 n 17 GLU 17 B THR 18 n 18 THR 18 B VAL 19 n 19 VAL 19 B GLY 20 n 20 GLY 20 B GLN 21 n 21 GLN 21 B PHE 22 n 22 PHE 22 B PRO 23 n 23 PRO 23 B VAL 24 n 24 VAL 24 B ILE 25 n 25 ILE 25 B THR 26 n 26 THR 26 B HIS 27 n 27 HIS 27 B HIS 28 n 28 HIS 28 B VAL 29 n 29 VAL 29 B PRO 30 n 30 PRO 30 B LEU 31 n 31 LEU 31 B GLY 32 n 32 GLY 32 B GLY 33 n 33 GLY 33 B GLY 34 n 34 GLY 34 B LEU 35 n 35 LEU 35 B GLN 36 n 36 GLN 36 B GLY 37 n 37 GLY 37 B THR 38 n 38 THR 38 B LEU 39 n 39 LEU 39 B HIS 40 n 40 HIS 40 B CYS 41 n 41 CYS 41 B TYR 42 n 42 TYR 42 B GLU 43 n 43 GLU 43 B ILE 44 n 44 ILE 44 B PRO 45 n 45 PRO 45 B LEU 46 n 46 LEU 46 B ALA 47 n 47 ALA 47 B ALA 48 n 48 ALA 48 B PRO 49 n 49 PRO 49 B TYR 50 n 50 TYR 50 B GLY 51 n 51 GLY 51 B VAL 52 n 52 VAL 52 B GLY 53 n 53 GLY 53 B PHE 54 n 54 PHE 54 B ALA 55 n 55 ALA 55 B LYS 56 n 56 LYS 56 B ASN 57 n 57 ASN 57 B GLY 58 n 58 GLY 58 B PRO 59 n 59 PRO 59 B THR 60 n 60 THR 60 B ARG 61 n 61 ARG 61 B TRP 62 n 62 TRP 62 B GLN 63 n 63 GLN 63 B TYR 64 n 64 TYR 64 B LYS 65 n 65 LYS 65 B ARG 66 n 66 ARG 66 B THR 67 n 67 THR 67 B ILE 68 n 68 ILE 68 B ASN 69 n 69 ASN 69 B GLN 70 n 70 GLN 70 B VAL 71 n 71 VAL 71 B VAL 72 n 72 VAL 72 B HIS 73 n 73 HIS 73 B ARG 74 n 74 ARG 74 B TRP 75 n 75 TRP 75 B GLY 76 n 76 GLY 76 B SER 77 n 77 SER 77 B HIS 78 n 78 HIS 78 B THR 79 n 79 THR 79 B VAL 80 n 80 VAL 80 B PRO 81 n 81 PRO 81 B PHE 82 n 82 PHE 82 B LEU 83 n 83 LEU 83 B LEU 84 n 84 LEU 84 B GLU 85 n 85 GLU 85 B PRO 86 n 86 PRO 86 B ASP 87 n 87 ASP 87 B ASN 88 n 88 ASN 88 B ILE 89 n 89 ILE 89 B ASN 90 n 90 ASN 90 B GLY 91 n 91 GLY 91 B LYS 92 n 92 LYS 92 B THR 93 n 93 THR 93 B CYS 94 n 94 CYS 94 B THR 95 n 95 THR 95 B ALA 96 n 96 ALA 96 B SER 97 n 97 SER 97 B HIS 98 n 98 HIS 98 B LEU 99 n 99 LEU 99 B CYS 100 n 100 CYS 100 B HIS 101 n 101 HIS 101 B ASN 102 n 102 ASN 102 B THR 103 n 103 THR 103 B ARG 104 n 104 ARG 104 B CYS 105 n 105 CYS 105 B HIS 106 n 106 HIS 106 B ASN 107 n 107 ASN 107 B PRO 108 n 108 PRO 108 B LEU 109 n 109 LEU 109 B HIS 110 n 110 HIS 110 B LEU 111 n 111 LEU 111 B CYS 112 n 112 CYS 112 B TRP 113 n 113 TRP 113 B GLU 114 n 114 GLU 114 B SER 115 n 115 SER 115 B LEU 116 n 116 LEU 116 B ASP 117 n 117 ASP 117 B ASP 118 n 118 ASP 118 B ASN 119 n 119 ASN 119 B LYS 120 n 120 LYS 120 B GLY 121 n 121 GLY 121 B ARG 122 n 122 ARG 122 B ASN 123 n 123 ASN 123 B TRP 124 n 124 TRP 124 B CYS 125 n 125 CYS 125 B PRO 126 n 126 PRO 126 B GLY 127 n 127 GLY 127 B PRO 128 n 128 PRO 128 B ASN 129 n 129 ASN 129 B GLY 130 n 130 GLY 130 B GLY 131 n 131 GLY 131 B CYS 132 n 132 CYS 132 B VAL 133 n 133 VAL 133 B HIS 134 n 134 HIS 134 B ALA 135 n 135 ALA 135 B VAL 136 n 136 VAL 136 B VAL 137 n 137 VAL 137 B CYS 138 n 138 CYS 138 B LEU 139 n 139 LEU 139 B ARG 140 n 140 ARG 140 B GLN 141 n 141 GLN 141 B GLY 142 n 142 GLY 142 B PRO 143 n 143 PRO 143 B LEU 144 n 144 LEU 144 B TYR 145 n 145 TYR 145 B GLY 146 n 146 GLY 146 B PRO 147 n 147 PRO 147 B GLY 148 n 148 GLY 148 B ALA 149 n 149 ALA 149 B THR 150 n 150 THR 150 B VAL 151 n 151 VAL 151 B ALA 152 n 152 ALA 152 B GLY 153 n 153 GLY 153 B PRO 154 n 154 PRO 154 B GLN 155 n 155 GLN 155 B GLN 156 n 156 GLN 156 B ARG 157 n 157 ARG 157 B GLY 158 n 158 GLY 158 B SER 159 n 159 SER 159 B HIS 160 n 160 HIS 160 B PHE 161 n 161 PHE 161 B VAL 162 n 162 VAL 162 B VAL 163 n 163 VAL 163 B author_defined_assembly 6 hexameric C DA 13 A O3' DA 13 1_555 B MG 206 L MG MG 1_555 B ASN 119 F OD1 ASN 119 1_555 92.4 C DA 13 A O3' DA 13 1_555 B MG 206 L MG MG 1_555 B HOH 302 R O HOH 1_555 88.1 B ASN 119 F OD1 ASN 119 1_555 B MG 206 L MG MG 1_555 B HOH 302 R O HOH 1_555 85.4 C DA 13 A O3' DA 13 1_555 B MG 206 L MG MG 1_555 B HOH 393 R O HOH 1_555 83.2 B ASN 119 F OD1 ASN 119 1_555 B MG 206 L MG MG 1_555 B HOH 393 R O HOH 1_555 89.3 B HOH 302 R O HOH 1_555 B MG 206 L MG MG 1_555 B HOH 393 R O HOH 1_555 169.6 C DA 13 A O3' DA 13 1_555 B MG 206 L MG MG 1_555 B HOH 451 R O HOH 1_555 168.0 B ASN 119 F OD1 ASN 119 1_555 B MG 206 L MG MG 1_555 B HOH 451 R O HOH 1_555 79.7 B HOH 302 R O HOH 1_555 B MG 206 L MG MG 1_555 B HOH 451 R O HOH 1_555 82.2 B HOH 393 R O HOH 1_555 B MG 206 L MG MG 1_555 B HOH 451 R O HOH 1_555 105.6 C DA 13 A O3' DA 13 1_555 B MG 206 L MG MG 1_555 B HOH 509 R O HOH 1_555 97.1 B ASN 119 F OD1 ASN 119 1_555 B MG 206 L MG MG 1_555 B HOH 509 R O HOH 1_555 170.4 B HOH 302 R O HOH 1_555 B MG 206 L MG MG 1_555 B HOH 509 R O HOH 1_555 96.5 B HOH 393 R O HOH 1_555 B MG 206 L MG MG 1_555 B HOH 509 R O HOH 1_555 90.2 B HOH 451 R O HOH 1_555 B MG 206 L MG MG 1_555 B HOH 509 R O HOH 1_555 91.2 E DA 13 C O3' DA 13 1_555 E MG 205 G MG MG 1_555 F HOH 512 P O HOH 1_555 97.3 E DA 13 C O3' DA 13 1_555 E MG 205 G MG MG 1_555 A ASN 119 E OD1 ASN 119 1_555 89.2 F HOH 512 P O HOH 1_555 E MG 205 G MG MG 1_555 A ASN 119 E OD1 ASN 119 1_555 172.7 E DA 13 C O3' DA 13 1_555 E MG 205 G MG MG 1_555 A HOH 384 Q O HOH 1_555 78.4 F HOH 512 P O HOH 1_555 E MG 205 G MG MG 1_555 A HOH 384 Q O HOH 1_555 86.7 A ASN 119 E OD1 ASN 119 1_555 E MG 205 G MG MG 1_555 A HOH 384 Q O HOH 1_555 91.5 E DA 13 C O3' DA 13 1_555 E MG 205 G MG MG 1_555 A HOH 519 Q O HOH 1_555 169.6 F HOH 512 P O HOH 1_555 E MG 205 G MG MG 1_555 A HOH 519 Q O HOH 1_555 93.0 A ASN 119 E OD1 ASN 119 1_555 E MG 205 G MG MG 1_555 A HOH 519 Q O HOH 1_555 80.5 A HOH 384 Q O HOH 1_555 E MG 205 G MG MG 1_555 A HOH 519 Q O HOH 1_555 102.2 E DA 13 C O3' DA 13 1_555 E MG 205 G MG MG 1_555 A HOH 520 Q O HOH 1_555 92.3 F HOH 512 P O HOH 1_555 E MG 205 G MG MG 1_555 A HOH 520 Q O HOH 1_555 97.1 A ASN 119 E OD1 ASN 119 1_555 E MG 205 G MG MG 1_555 A HOH 520 Q O HOH 1_555 85.8 A HOH 384 Q O HOH 1_555 E MG 205 G MG MG 1_555 A HOH 520 Q O HOH 1_555 170.4 A HOH 519 Q O HOH 1_555 E MG 205 G MG MG 1_555 A HOH 520 Q O HOH 1_555 86.5 A CYS 41 E SG CYS 41 1_555 A ZN 202 I ZN ZN 1_555 A CYS 100 E SG CYS 100 1_555 112.0 A CYS 41 E SG CYS 41 1_555 A ZN 202 I ZN ZN 1_555 A CYS 105 E SG CYS 105 1_555 110.4 A CYS 100 E SG CYS 100 1_555 A ZN 202 I ZN ZN 1_555 A CYS 105 E SG CYS 105 1_555 112.8 A CYS 41 E SG CYS 41 1_555 A ZN 202 I ZN ZN 1_555 A HIS 110 E ND1 HIS 110 1_555 106.1 A CYS 100 E SG CYS 100 1_555 A ZN 202 I ZN ZN 1_555 A HIS 110 E ND1 HIS 110 1_555 105.1 A CYS 105 E SG CYS 105 1_555 A ZN 202 I ZN ZN 1_555 A HIS 110 E ND1 HIS 110 1_555 110.0 A CYS 125 E SG CYS 125 1_555 A ZN 201 H ZN ZN 1_555 A CYS 132 E SG CYS 132 1_555 105.3 A CYS 125 E SG CYS 125 1_555 A ZN 201 H ZN ZN 1_555 A HIS 134 E ND1 HIS 134 1_555 113.0 A CYS 132 E SG CYS 132 1_555 A ZN 201 H ZN ZN 1_555 A HIS 134 E ND1 HIS 134 1_555 109.9 A CYS 125 E SG CYS 125 1_555 A ZN 201 H ZN ZN 1_555 A CYS 138 E SG CYS 138 1_555 106.3 A CYS 132 E SG CYS 132 1_555 A ZN 201 H ZN ZN 1_555 A CYS 138 E SG CYS 138 1_555 117.1 A HIS 134 E ND1 HIS 134 1_555 A ZN 201 H ZN ZN 1_555 A CYS 138 E SG CYS 138 1_555 105.4 B CYS 41 F SG CYS 41 1_555 B ZN 204 K ZN ZN 1_555 B CYS 100 F SG CYS 100 1_555 113.5 B CYS 41 F SG CYS 41 1_555 B ZN 204 K ZN ZN 1_555 B CYS 105 F SG CYS 105 1_555 109.0 B CYS 100 F SG CYS 100 1_555 B ZN 204 K ZN ZN 1_555 B CYS 105 F SG CYS 105 1_555 114.1 B CYS 41 F SG CYS 41 1_555 B ZN 204 K ZN ZN 1_555 B HIS 110 F ND1 HIS 110 1_555 104.2 B CYS 100 F SG CYS 100 1_555 B ZN 204 K ZN ZN 1_555 B HIS 110 F ND1 HIS 110 1_555 108.8 B CYS 105 F SG CYS 105 1_555 B ZN 204 K ZN ZN 1_555 B HIS 110 F ND1 HIS 110 1_555 106.5 B CYS 125 F SG CYS 125 1_555 B ZN 203 J ZN ZN 1_555 B CYS 132 F SG CYS 132 1_555 108.1 B CYS 125 F SG CYS 125 1_555 B ZN 203 J ZN ZN 1_555 B HIS 134 F ND1 HIS 134 1_555 109.5 B CYS 132 F SG CYS 132 1_555 B ZN 203 J ZN ZN 1_555 B HIS 134 F ND1 HIS 134 1_555 109.8 B CYS 125 F SG CYS 125 1_555 B ZN 203 J ZN ZN 1_555 B CYS 138 F SG CYS 138 1_555 110.3 B CYS 132 F SG CYS 132 1_555 B ZN 203 J ZN ZN 1_555 B CYS 138 F SG CYS 138 1_555 113.7 B HIS 134 F ND1 HIS 134 1_555 B ZN 203 J ZN ZN 1_555 B CYS 138 F SG CYS 138 1_555 105.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O HIS 73 E O HIS 73 A N ARG 66 E N ARG 66 A O ARG 61 E O ARG 61 A N GLY 58 E N GLY 58 A O THR 95 E O THR 95 A N GLU 114 E N GLU 114 A O PRO 23 E O PRO 23 A N GLU 43 E N GLU 43 B O HIS 73 F O HIS 73 B N ARG 66 F N ARG 66 B O ARG 61 F O ARG 61 B N GLY 58 F N GLY 58 B O THR 95 F O THR 95 B N GLU 114 F N GLU 114 B O PRO 23 F O PRO 23 B N GLU 43 F N GLU 43 1 A MET 1 E MET 1 1 Y 1 B MET 1 F MET 1 1 Y 1 C DT 10 0.063 SIDE CHAIN 1 D DA 17 0.066 SIDE CHAIN 1 -3.35 0.50 120.30 116.95 B B B NE CZ NH2 ARG ARG ARG 140 140 140 N 1 D D P OP3 DG DG 14 14 -0.105 0.012 1.607 1.502 N 1 F F P OP3 DG DG 14 14 -0.097 0.012 1.607 1.510 N 1 A GLN 70 74.01 -4.75 1 B ILE 68 -92.60 -85.36 1 B GLN 70 68.13 -1.10 PARHCSDX.PRO TOPHCSDX.PRO DNA-RNA-MULTI-ENDO.PARAM DNA-RNA-MULTI-ENDO.TOP TIP3P.PARAMETER TIP3P.TOPOLOGY 32.5 0.2970000 0.2080000 0.2080000 1.8 50.00 3581 71629 5 99.4 RANDOM 1 THROUGHOUT 2.0 MULTIPLE ISOMORPHOUS REPLACEMENT 1.8 50.00 391 3743 6 856 2490 0.01 1.3 27.2 1.7 1 RESTRAINTS 1 X-RAY DIFFRACTION 0.4120000 0.3360000 1.87 352 7042 10 5 99.4 1.8 50.0 1A73 362336 2.0 0.0490000 0.0490000 1 19.1 5.04 99.8 0.1200000 1.8 1.9 4.9 0.1200000 4.97 99.7 model building CCP4 refinement X-PLOR 3.843 data reduction MOSFLM data scaling CCP4 (AGROVATA data scaling ROTAVATA phasing CCP4 INTRON-ENCODED ENDONUCLEASE I-PPOI COMPLEXED WITH DNA 1 N N 2 N N 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N 4 N N 6 N N 6 N N 6 N N 6 N N 6 N N 6 N N A ASN 5 E ASN 5 HELX_P A GLN 21 E GLN 21 1 1 17 A VAL 80 E VAL 80 HELX_P A PHE 82 E PHE 82 5 2 3 A PRO 108 E PRO 108 HELX_P A HIS 110 E HIS 110 5 3 3 A LEU 116 E LEU 116 HELX_P A TRP 124 E TRP 124 1 4 9 B ASN 5 F ASN 5 HELX_P B GLN 21 F GLN 21 1 5 17 B VAL 80 F VAL 80 HELX_P B PHE 82 F PHE 82 5 6 3 B PRO 108 F PRO 108 HELX_P B HIS 110 F HIS 110 5 7 3 B LEU 116 F LEU 116 HELX_P B TRP 124 F TRP 124 1 8 9 metalc 2.452 C DA 13 A O3' DA 13 1_555 B MG 206 L MG MG 1_555 metalc 2.236 E DA 13 C O3' DA 13 1_555 E MG 205 G MG MG 1_555 metalc 2.780 E MG 205 G MG MG 1_555 F HOH 512 P O HOH 1_555 metalc 2.434 E MG 205 G MG MG 1_555 A ASN 119 E OD1 ASN 119 1_555 metalc 2.738 E MG 205 G MG MG 1_555 A HOH 384 Q O HOH 1_555 metalc 2.685 E MG 205 G MG MG 1_555 A HOH 519 Q O HOH 1_555 metalc 2.562 E MG 205 G MG MG 1_555 A HOH 520 Q O HOH 1_555 metalc 2.339 A CYS 41 E SG CYS 41 1_555 A ZN 202 I ZN ZN 1_555 metalc 2.366 A CYS 100 E SG CYS 100 1_555 A ZN 202 I ZN ZN 1_555 metalc 2.355 A CYS 105 E SG CYS 105 1_555 A ZN 202 I ZN ZN 1_555 metalc 2.155 A HIS 110 E ND1 HIS 110 1_555 A ZN 202 I ZN ZN 1_555 metalc 2.376 A CYS 125 E SG CYS 125 1_555 A ZN 201 H ZN ZN 1_555 metalc 2.460 A CYS 132 E SG CYS 132 1_555 A ZN 201 H ZN ZN 1_555 metalc 2.205 A HIS 134 E ND1 HIS 134 1_555 A ZN 201 H ZN ZN 1_555 metalc 2.409 A CYS 138 E SG CYS 138 1_555 A ZN 201 H ZN ZN 1_555 metalc 2.288 B CYS 41 F SG CYS 41 1_555 B ZN 204 K ZN ZN 1_555 metalc 2.368 B CYS 100 F SG CYS 100 1_555 B ZN 204 K ZN ZN 1_555 metalc 2.347 B CYS 105 F SG CYS 105 1_555 B ZN 204 K ZN ZN 1_555 metalc 2.168 B HIS 110 F ND1 HIS 110 1_555 B ZN 204 K ZN ZN 1_555 metalc 2.287 B ASN 119 F OD1 ASN 119 1_555 B MG 206 L MG MG 1_555 metalc 2.380 B CYS 125 F SG CYS 125 1_555 B ZN 203 J ZN ZN 1_555 metalc 2.441 B CYS 132 F SG CYS 132 1_555 B ZN 203 J ZN ZN 1_555 metalc 2.212 B HIS 134 F ND1 HIS 134 1_555 B ZN 203 J ZN ZN 1_555 metalc 2.396 B CYS 138 F SG CYS 138 1_555 B ZN 203 J ZN ZN 1_555 metalc 2.576 B MG 206 L MG MG 1_555 B HOH 302 R O HOH 1_555 metalc 2.687 B MG 206 L MG MG 1_555 B HOH 393 R O HOH 1_555 metalc 2.659 B MG 206 L MG MG 1_555 B HOH 451 R O HOH 1_555 metalc 2.681 B MG 206 L MG MG 1_555 B HOH 509 R O HOH 1_555 hydrog WATSON-CRICK C DT 2 A N3 DT 2 1_555 F DA 21 D N1 DA 8 1_555 hydrog WATSON-CRICK C DT 2 A O4 DT 2 1_555 F DA 21 D N6 DA 8 1_555 hydrog WATSON-CRICK C DG 3 A N1 DG 3 1_555 F DC 20 D N3 DC 7 1_555 hydrog WATSON-CRICK C DG 3 A N2 DG 3 1_555 F DC 20 D O2 DC 7 1_555 hydrog WATSON-CRICK C DG 3 A O6 DG 3 1_555 F DC 20 D N4 DC 7 1_555 hydrog WATSON-CRICK C DA 4 A N1 DA 4 1_555 F DT 19 D N3 DT 6 1_555 hydrog WATSON-CRICK C DA 4 A N6 DA 4 1_555 F DT 19 D O4 DT 6 1_555 hydrog WATSON-CRICK C DC 5 A N3 DC 5 1_555 F DG 18 D N1 DG 5 1_555 hydrog WATSON-CRICK C DC 5 A N4 DC 5 1_555 F DG 18 D O6 DG 5 1_555 hydrog WATSON-CRICK C DC 5 A O2 DC 5 1_555 F DG 18 D N2 DG 5 1_555 hydrog WATSON-CRICK C DT 6 A N3 DT 6 1_555 F DA 17 D N1 DA 4 1_555 hydrog WATSON-CRICK C DT 6 A O4 DT 6 1_555 F DA 17 D N6 DA 4 1_555 hydrog WATSON-CRICK C DC 7 A N3 DC 7 1_555 F DG 16 D N1 DG 3 1_555 hydrog WATSON-CRICK C DC 7 A N4 DC 7 1_555 F DG 16 D O6 DG 3 1_555 hydrog WATSON-CRICK C DC 7 A O2 DC 7 1_555 F DG 16 D N2 DG 3 1_555 hydrog WATSON-CRICK C DT 8 A N3 DT 8 1_555 F DA 15 D N1 DA 2 1_555 hydrog WATSON-CRICK C DT 8 A O4 DT 8 1_555 F DA 15 D N6 DA 2 1_555 hydrog WATSON-CRICK C DC 9 A N3 DC 9 1_555 F DG 14 D N1 DG 1 1_555 hydrog WATSON-CRICK C DC 9 A N4 DC 9 1_555 F DG 14 D O6 DG 1 1_555 hydrog WATSON-CRICK C DC 9 A O2 DC 9 1_555 F DG 14 D N2 DG 1 1_555 hydrog WATSON-CRICK C DT 10 A N3 DT 10 1_555 E DA 13 C N1 DA 13 1_555 hydrog WATSON-CRICK C DT 10 A O4 DT 10 1_555 E DA 13 C N6 DA 13 1_555 hydrog WATSON-CRICK C DT 11 A N3 DT 11 1_555 E DA 12 C N1 DA 12 1_555 hydrog WATSON-CRICK C DT 11 A O4 DT 11 1_555 E DA 12 C N6 DA 12 1_555 hydrog WATSON-CRICK C DA 12 A N1 DA 12 1_555 E DT 11 C N3 DT 11 1_555 hydrog WATSON-CRICK C DA 12 A N6 DA 12 1_555 E DT 11 C O4 DT 11 1_555 hydrog WATSON-CRICK C DA 13 A N1 DA 13 1_555 E DT 10 C N3 DT 10 1_555 hydrog WATSON-CRICK C DA 13 A N6 DA 13 1_555 E DT 10 C O4 DT 10 1_555 hydrog WATSON-CRICK D DG 14 B N1 DG 1 1_555 E DC 9 C N3 DC 9 1_555 hydrog WATSON-CRICK D DG 14 B N2 DG 1 1_555 E DC 9 C O2 DC 9 1_555 hydrog WATSON-CRICK D DG 14 B O6 DG 1 1_555 E DC 9 C N4 DC 9 1_555 hydrog WATSON-CRICK D DA 15 B N1 DA 2 1_555 E DT 8 C N3 DT 8 1_555 hydrog WATSON-CRICK D DA 15 B N6 DA 2 1_555 E DT 8 C O4 DT 8 1_555 hydrog WATSON-CRICK D DG 16 B N1 DG 3 1_555 E DC 7 C N3 DC 7 1_555 hydrog WATSON-CRICK D DG 16 B N2 DG 3 1_555 E DC 7 C O2 DC 7 1_555 hydrog WATSON-CRICK D DG 16 B O6 DG 3 1_555 E DC 7 C N4 DC 7 1_555 hydrog WATSON-CRICK D DA 17 B N1 DA 4 1_555 E DT 6 C N3 DT 6 1_555 hydrog WATSON-CRICK D DA 17 B N6 DA 4 1_555 E DT 6 C O4 DT 6 1_555 hydrog WATSON-CRICK D DG 18 B N1 DG 5 1_555 E DC 5 C N3 DC 5 1_555 hydrog WATSON-CRICK D DG 18 B N2 DG 5 1_555 E DC 5 C O2 DC 5 1_555 hydrog WATSON-CRICK D DG 18 B O6 DG 5 1_555 E DC 5 C N4 DC 5 1_555 hydrog WATSON-CRICK D DT 19 B N3 DT 6 1_555 E DA 4 C N1 DA 4 1_555 hydrog WATSON-CRICK D DT 19 B O4 DT 6 1_555 E DA 4 C N6 DA 4 1_555 hydrog WATSON-CRICK D DC 20 B N3 DC 7 1_555 E DG 3 C N1 DG 3 1_555 hydrog WATSON-CRICK D DC 20 B N4 DC 7 1_555 E DG 3 C O6 DG 3 1_555 hydrog WATSON-CRICK D DC 20 B O2 DC 7 1_555 E DG 3 C N2 DG 3 1_555 hydrog WATSON-CRICK D DA 21 B N1 DA 8 1_555 E DT 2 C N3 DT 2 1_555 hydrog WATSON-CRICK D DA 21 B N6 DA 8 1_555 E DT 2 C O4 DT 2 1_555 HYDROLASE/DNA COMPLEX (HOMING ENDONUCLEASE-DNA), INTRON, ZINC, DNA BINDING, PROTEIN FOLDING, HYDROLASE-DNA COMPLEX A ALA 48 E ALA 48 1 A PRO 49 E PRO 49 0.11 B ALA 48 F ALA 48 1 B PRO 49 F PRO 49 -0.30 given -0.970715 0.239393 0.020068 0.239758 0.970659 0.018334 -0.015090 0.022609 -0.999630 26.76770 -3.87490 57.67150 PPO1_PHYPO UNP 3 1 Q94702 1A73 PDB 1 1A73 1A73 PDB 2 1A73 1 163 1A73 1 163 Q94702 A 1 1 163 1 163 1A73 1 163 Q94702 B 1 1 163 1 13 1A73 1 13 1A73 C 2 1 13 14 21 1A73 14 21 1A73 D 3 1 8 1 13 1A73 1 13 1A73 E 2 1 13 14 21 1A73 14 21 1A73 F 3 1 8 3 2 2 3 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 72 E VAL 72 A GLY 76 E GLY 76 A ARG 61 E ARG 61 A THR 67 E THR 67 A PHE 54 E PHE 54 A GLY 58 E GLY 58 A CYS 94 E CYS 94 A HIS 98 E HIS 98 A LEU 111 E LEU 111 A SER 115 E SER 115 A PRO 23 E PRO 23 A GLY 32 E GLY 32 A LEU 35 E LEU 35 A GLU 43 E GLU 43 B VAL 72 F VAL 72 B GLY 76 F GLY 76 B ARG 61 F ARG 61 B THR 67 F THR 67 B PHE 54 F PHE 54 B GLY 58 F GLY 58 B CYS 94 F CYS 94 B HIS 98 F HIS 98 B LEU 111 F LEU 111 B SER 115 F SER 115 B PRO 23 F PRO 23 B GLY 32 F GLY 32 B LEU 35 F LEU 35 B GLU 43 F GLU 43 BINDING SITE FOR RESIDUE ZN A 201 A ZN 201 Software 4 BINDING SITE FOR RESIDUE ZN A 202 A ZN 202 Software 4 BINDING SITE FOR RESIDUE ZN B 203 B ZN 203 Software 4 BINDING SITE FOR RESIDUE ZN B 204 B ZN 204 Software 4 BINDING SITE FOR RESIDUE MG E 205 E MG 205 Software 6 BINDING SITE FOR RESIDUE MG B 206 B MG 206 Software 6 A CYS 125 E CYS 125 4 1_555 A CYS 132 E CYS 132 4 1_555 A HIS 134 E HIS 134 4 1_555 A CYS 138 E CYS 138 4 1_555 A CYS 41 E CYS 41 4 1_555 A CYS 100 E CYS 100 4 1_555 A CYS 105 E CYS 105 4 1_555 A HIS 110 E HIS 110 4 1_555 B CYS 125 F CYS 125 4 1_555 B CYS 132 F CYS 132 4 1_555 B HIS 134 F HIS 134 4 1_555 B CYS 138 F CYS 138 4 1_555 B CYS 41 F CYS 41 4 1_555 B CYS 100 F CYS 100 4 1_555 B CYS 105 F CYS 105 4 1_555 B HIS 110 F HIS 110 4 1_555 A ASN 119 E ASN 119 6 1_555 A HOH 384 Q HOH 6 1_555 A HOH 519 Q HOH 6 1_555 A HOH 520 Q HOH 6 1_555 E DA 13 C DA 13 6 1_555 F HOH 512 P HOH 6 1_555 B ASN 119 F ASN 119 6 1_555 B HOH 302 R HOH 6 1_555 B HOH 393 R HOH 6 1_555 B HOH 451 R HOH 6 1_555 B HOH 509 R HOH 6 1_555 C DA 13 A DA 13 6 1_555 152 trigonal P 31 2 1