0.021863
0.000000
0.000000
0.000000
0.008592
0.000000
0.000000
0.000000
0.005905
0.00000
0.00000
0.00000
Menssen, R.
Orth, P.
Ziegler, A.
Saenger, W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
45.740
116.390
169.340
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
285
645
653
10.1006/jmbi.1998.2363
9878435
Decamer-like conformation of a nona-peptide bound to HLA-B*3501 due to non-standard positioning of the C terminus.
1999
10.2210/pdb1a9b/pdb
pdb_00001a9b
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1997-04
MARRESEARCH
M
x-ray
1
0.909
1.0
X11
EMBL/DESY, HAMBURG
0.909
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X11
32027.324
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN)
2
man
polymer
11879.356
BETA-2-MICROGLOBULIN
2
man
polymer
PEPTIDE FROM EBNA3C-PROTEIN FROM EBV
1028.198
PEPTIDE LPPLDITPY
2
man
polymer
no
no
GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN
LRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYL
EGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT
FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS
GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN
LRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYL
EGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT
FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS
A,D
polypeptide(L)
no
no
MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA
CRVNHVTLSQPKIVKWDRDM
B,E
polypeptide(L)
no
no
LPPLDITPY
LPPLDITPY
C,F
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
3
2.51
46
5.6
20% MPD, 20% PEG 6000, 1% GLYCEROL, 100 MM SODIUM CITRATE, PH 5.6
database_2
diffrn_source
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Refinement description
1
0
1998-10-21
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
Y
BNL
1998-04-03
REL
REL
PEPTIDE FROM EBNA3C-PROTEIN FROM EBV
sample
1HHI
PDB
experimental model
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
HIS
3
n
3
HIS
3
A
SER
4
n
4
SER
4
A
MET
5
n
5
MET
5
A
ARG
6
n
6
ARG
6
A
TYR
7
n
7
TYR
7
A
PHE
8
n
8
PHE
8
A
TYR
9
n
9
TYR
9
A
THR
10
n
10
THR
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
SER
13
n
13
SER
13
A
ARG
14
n
14
ARG
14
A
PRO
15
n
15
PRO
15
A
GLY
16
n
16
GLY
16
A
ARG
17
n
17
ARG
17
A
GLY
18
n
18
GLY
18
A
GLU
19
n
19
GLU
19
A
PRO
20
n
20
PRO
20
A
ARG
21
n
21
ARG
21
A
PHE
22
n
22
PHE
22
A
ILE
23
n
23
ILE
23
A
ALA
24
n
24
ALA
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
TYR
27
n
27
TYR
27
A
VAL
28
n
28
VAL
28
A
ASP
29
n
29
ASP
29
A
ASP
30
n
30
ASP
30
A
THR
31
n
31
THR
31
A
GLN
32
n
32
GLN
32
A
PHE
33
n
33
PHE
33
A
VAL
34
n
34
VAL
34
A
ARG
35
n
35
ARG
35
A
PHE
36
n
36
PHE
36
A
ASP
37
n
37
ASP
37
A
SER
38
n
38
SER
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
ALA
41
n
41
ALA
41
A
SER
42
n
42
SER
42
A
PRO
43
n
43
PRO
43
A
ARG
44
n
44
ARG
44
A
THR
45
n
45
THR
45
A
GLU
46
n
46
GLU
46
A
PRO
47
n
47
PRO
47
A
ARG
48
n
48
ARG
48
A
ALA
49
n
49
ALA
49
A
PRO
50
n
50
PRO
50
A
TRP
51
n
51
TRP
51
A
ILE
52
n
52
ILE
52
A
GLU
53
n
53
GLU
53
A
GLN
54
n
54
GLN
54
A
GLU
55
n
55
GLU
55
A
GLY
56
n
56
GLY
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
TYR
59
n
59
TYR
59
A
TRP
60
n
60
TRP
60
A
ASP
61
n
61
ASP
61
A
ARG
62
n
62
ARG
62
A
ASN
63
n
63
ASN
63
A
THR
64
n
64
THR
64
A
GLN
65
n
65
GLN
65
A
ILE
66
n
66
ILE
66
A
PHE
67
n
67
PHE
67
A
LYS
68
n
68
LYS
68
A
THR
69
n
69
THR
69
A
ASN
70
n
70
ASN
70
A
THR
71
n
71
THR
71
A
GLN
72
n
72
GLN
72
A
THR
73
n
73
THR
73
A
TYR
74
n
74
TYR
74
A
ARG
75
n
75
ARG
75
A
GLU
76
n
76
GLU
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
ARG
79
n
79
ARG
79
A
ASN
80
n
80
ASN
80
A
LEU
81
n
81
LEU
81
A
ARG
82
n
82
ARG
82
A
GLY
83
n
83
GLY
83
A
TYR
84
n
84
TYR
84
A
TYR
85
n
85
TYR
85
A
ASN
86
n
86
ASN
86
A
GLN
87
n
87
GLN
87
A
SER
88
n
88
SER
88
A
GLU
89
n
89
GLU
89
A
ALA
90
n
90
ALA
90
A
GLY
91
n
91
GLY
91
A
SER
92
n
92
SER
92
A
HIS
93
n
93
HIS
93
A
ILE
94
n
94
ILE
94
A
ILE
95
n
95
ILE
95
A
GLN
96
n
96
GLN
96
A
ARG
97
n
97
ARG
97
A
MET
98
n
98
MET
98
A
TYR
99
n
99
TYR
99
A
GLY
100
n
100
GLY
100
A
CYS
101
n
101
CYS
101
A
ASP
102
n
102
ASP
102
A
LEU
103
n
103
LEU
103
A
GLY
104
n
104
GLY
104
A
PRO
105
n
105
PRO
105
A
ASP
106
n
106
ASP
106
A
GLY
107
n
107
GLY
107
A
ARG
108
n
108
ARG
108
A
LEU
109
n
109
LEU
109
A
LEU
110
n
110
LEU
110
A
ARG
111
n
111
ARG
111
A
GLY
112
n
112
GLY
112
A
HIS
113
n
113
HIS
113
A
ASP
114
n
114
ASP
114
A
GLN
115
n
115
GLN
115
A
SER
116
n
116
SER
116
A
ALA
117
n
117
ALA
117
A
TYR
118
n
118
TYR
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
LYS
121
n
121
LYS
121
A
ASP
122
n
122
ASP
122
A
TYR
123
n
123
TYR
123
A
ILE
124
n
124
ILE
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
ASN
127
n
127
ASN
127
A
GLU
128
n
128
GLU
128
A
ASP
129
n
129
ASP
129
A
LEU
130
n
130
LEU
130
A
SER
131
n
131
SER
131
A
SER
132
n
132
SER
132
A
TRP
133
n
133
TRP
133
A
THR
134
n
134
THR
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
THR
138
n
138
THR
138
A
ALA
139
n
139
ALA
139
A
ALA
140
n
140
ALA
140
A
GLN
141
n
141
GLN
141
A
ILE
142
n
142
ILE
142
A
THR
143
n
143
THR
143
A
GLN
144
n
144
GLN
144
A
ARG
145
n
145
ARG
145
A
LYS
146
n
146
LYS
146
A
TRP
147
n
147
TRP
147
A
GLU
148
n
148
GLU
148
A
ALA
149
n
149
ALA
149
A
ALA
150
n
150
ALA
150
A
ARG
151
n
151
ARG
151
A
VAL
152
n
152
VAL
152
A
ALA
153
n
153
ALA
153
A
GLU
154
n
154
GLU
154
A
GLN
155
n
155
GLN
155
A
LEU
156
n
156
LEU
156
A
ARG
157
n
157
ARG
157
A
ALA
158
n
158
ALA
158
A
TYR
159
n
159
TYR
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
LEU
163
n
163
LEU
163
A
CYS
164
n
164
CYS
164
A
VAL
165
n
165
VAL
165
A
GLU
166
n
166
GLU
166
A
TRP
167
n
167
TRP
167
A
LEU
168
n
168
LEU
168
A
ARG
169
n
169
ARG
169
A
ARG
170
n
170
ARG
170
A
TYR
171
n
171
TYR
171
A
LEU
172
n
172
LEU
172
A
GLU
173
n
173
GLU
173
A
ASN
174
n
174
ASN
174
A
GLY
175
n
175
GLY
175
A
LYS
176
n
176
LYS
176
A
GLU
177
n
177
GLU
177
A
THR
178
n
178
THR
178
A
LEU
179
n
179
LEU
179
A
GLN
180
n
180
GLN
180
A
ARG
181
n
181
ARG
181
A
ALA
182
n
182
ALA
182
A
ASP
183
n
183
ASP
183
A
PRO
184
n
184
PRO
184
A
PRO
185
n
185
PRO
185
A
LYS
186
n
186
LYS
186
A
THR
187
n
187
THR
187
A
HIS
188
n
188
HIS
188
A
VAL
189
n
189
VAL
189
A
THR
190
n
190
THR
190
A
HIS
191
n
191
HIS
191
A
HIS
192
n
192
HIS
192
A
PRO
193
n
193
PRO
193
A
VAL
194
n
194
VAL
194
A
SER
195
n
195
SER
195
A
ASP
196
n
196
ASP
196
A
HIS
197
n
197
HIS
197
A
GLU
198
n
198
GLU
198
A
ALA
199
n
199
ALA
199
A
THR
200
n
200
THR
200
A
LEU
201
n
201
LEU
201
A
ARG
202
n
202
ARG
202
A
CYS
203
n
203
CYS
203
A
TRP
204
n
204
TRP
204
A
ALA
205
n
205
ALA
205
A
LEU
206
n
206
LEU
206
A
GLY
207
n
207
GLY
207
A
PHE
208
n
208
PHE
208
A
TYR
209
n
209
TYR
209
A
PRO
210
n
210
PRO
210
A
ALA
211
n
211
ALA
211
A
GLU
212
n
212
GLU
212
A
ILE
213
n
213
ILE
213
A
THR
214
n
214
THR
214
A
LEU
215
n
215
LEU
215
A
THR
216
n
216
THR
216
A
TRP
217
n
217
TRP
217
A
GLN
218
n
218
GLN
218
A
ARG
219
n
219
ARG
219
A
ASP
220
n
220
ASP
220
A
GLY
221
n
221
GLY
221
A
GLU
222
n
222
GLU
222
A
ASP
223
n
223
ASP
223
A
GLN
224
n
224
GLN
224
A
THR
225
n
225
THR
225
A
GLN
226
n
226
GLN
226
A
ASP
227
n
227
ASP
227
A
THR
228
n
228
THR
228
A
GLU
229
n
229
GLU
229
A
LEU
230
n
230
LEU
230
A
VAL
231
n
231
VAL
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
ARG
234
n
234
ARG
234
A
PRO
235
n
235
PRO
235
A
ALA
236
n
236
ALA
236
A
GLY
237
n
237
GLY
237
A
ASP
238
n
238
ASP
238
A
ARG
239
n
239
ARG
239
A
THR
240
n
240
THR
240
A
PHE
241
n
241
PHE
241
A
GLN
242
n
242
GLN
242
A
LYS
243
n
243
LYS
243
A
TRP
244
n
244
TRP
244
A
ALA
245
n
245
ALA
245
A
ALA
246
n
246
ALA
246
A
VAL
247
n
247
VAL
247
A
VAL
248
n
248
VAL
248
A
VAL
249
n
249
VAL
249
A
PRO
250
n
250
PRO
250
A
SER
251
n
251
SER
251
A
GLY
252
n
252
GLY
252
A
GLU
253
n
253
GLU
253
A
GLU
254
n
254
GLU
254
A
GLN
255
n
255
GLN
255
A
ARG
256
n
256
ARG
256
A
TYR
257
n
257
TYR
257
A
THR
258
n
258
THR
258
A
CYS
259
n
259
CYS
259
A
HIS
260
n
260
HIS
260
A
VAL
261
n
261
VAL
261
A
GLN
262
n
262
GLN
262
A
HIS
263
n
263
HIS
263
A
GLU
264
n
264
GLU
264
A
GLY
265
n
265
GLY
265
A
LEU
266
n
266
LEU
266
A
PRO
267
n
267
PRO
267
A
LYS
268
n
268
LYS
268
A
PRO
269
n
269
PRO
269
A
LEU
270
n
270
LEU
270
A
THR
271
n
271
THR
271
A
LEU
272
n
272
LEU
272
A
ARG
273
n
273
ARG
273
A
TRP
274
n
274
TRP
274
A
GLU
275
n
275
GLU
275
A
PRO
276
n
276
PRO
276
A
SER
277
n
277
SER
277
A
MET
1
n
1
MET
1
B
ILE
2
n
2
ILE
2
B
GLN
3
n
3
GLN
3
B
ARG
4
n
4
ARG
4
B
THR
5
n
5
THR
5
B
PRO
6
n
6
PRO
6
B
LYS
7
n
7
LYS
7
B
ILE
8
n
8
ILE
8
B
GLN
9
n
9
GLN
9
B
VAL
10
n
10
VAL
10
B
TYR
11
n
11
TYR
11
B
SER
12
n
12
SER
12
B
ARG
13
n
13
ARG
13
B
HIS
14
n
14
HIS
14
B
PRO
15
n
15
PRO
15
B
ALA
16
n
16
ALA
16
B
GLU
17
n
17
GLU
17
B
ASN
18
n
18
ASN
18
B
GLY
19
n
19
GLY
19
B
LYS
20
n
20
LYS
20
B
SER
21
n
21
SER
21
B
ASN
22
n
22
ASN
22
B
PHE
23
n
23
PHE
23
B
LEU
24
n
24
LEU
24
B
ASN
25
n
25
ASN
25
B
CYS
26
n
26
CYS
26
B
TYR
27
n
27
TYR
27
B
VAL
28
n
28
VAL
28
B
SER
29
n
29
SER
29
B
GLY
30
n
30
GLY
30
B
PHE
31
n
31
PHE
31
B
HIS
32
n
32
HIS
32
B
PRO
33
n
33
PRO
33
B
SER
34
n
34
SER
34
B
ASP
35
n
35
ASP
35
B
ILE
36
n
36
ILE
36
B
GLU
37
n
37
GLU
37
B
VAL
38
n
38
VAL
38
B
ASP
39
n
39
ASP
39
B
LEU
40
n
40
LEU
40
B
LEU
41
n
41
LEU
41
B
LYS
42
n
42
LYS
42
B
ASN
43
n
43
ASN
43
B
GLY
44
n
44
GLY
44
B
GLU
45
n
45
GLU
45
B
ARG
46
n
46
ARG
46
B
ILE
47
n
47
ILE
47
B
GLU
48
n
48
GLU
48
B
LYS
49
n
49
LYS
49
B
VAL
50
n
50
VAL
50
B
GLU
51
n
51
GLU
51
B
HIS
52
n
52
HIS
52
B
SER
53
n
53
SER
53
B
ASP
54
n
54
ASP
54
B
LEU
55
n
55
LEU
55
B
SER
56
n
56
SER
56
B
PHE
57
n
57
PHE
57
B
SER
58
n
58
SER
58
B
LYS
59
n
59
LYS
59
B
ASP
60
n
60
ASP
60
B
TRP
61
n
61
TRP
61
B
SER
62
n
62
SER
62
B
PHE
63
n
63
PHE
63
B
TYR
64
n
64
TYR
64
B
LEU
65
n
65
LEU
65
B
LEU
66
n
66
LEU
66
B
TYR
67
n
67
TYR
67
B
TYR
68
n
68
TYR
68
B
THR
69
n
69
THR
69
B
GLU
70
n
70
GLU
70
B
PHE
71
n
71
PHE
71
B
THR
72
n
72
THR
72
B
PRO
73
n
73
PRO
73
B
THR
74
n
74
THR
74
B
GLU
75
n
75
GLU
75
B
LYS
76
n
76
LYS
76
B
ASP
77
n
77
ASP
77
B
GLU
78
n
78
GLU
78
B
TYR
79
n
79
TYR
79
B
ALA
80
n
80
ALA
80
B
CYS
81
n
81
CYS
81
B
ARG
82
n
82
ARG
82
B
VAL
83
n
83
VAL
83
B
ASN
84
n
84
ASN
84
B
HIS
85
n
85
HIS
85
B
VAL
86
n
86
VAL
86
B
THR
87
n
87
THR
87
B
LEU
88
n
88
LEU
88
B
SER
89
n
89
SER
89
B
GLN
90
n
90
GLN
90
B
PRO
91
n
91
PRO
91
B
LYS
92
n
92
LYS
92
B
ILE
93
n
93
ILE
93
B
VAL
94
n
94
VAL
94
B
LYS
95
n
95
LYS
95
B
TRP
96
n
96
TRP
96
B
ASP
97
n
97
ASP
97
B
ARG
98
n
98
ARG
98
B
ASP
99
n
99
ASP
99
B
MET
100
n
100
MET
100
B
LEU
1
n
1
LEU
1
C
PRO
2
n
2
PRO
2
C
PRO
3
n
3
PRO
3
C
LEU
4
n
4
LEU
4
C
ASP
5
n
5
ASP
5
C
ILE
6
n
6
ILE
6
C
THR
7
n
7
THR
7
C
PRO
8
n
8
PRO
8
C
TYR
9
n
9
TYR
9
C
GLY
1
n
1
GLY
1
D
SER
2
n
2
SER
2
D
HIS
3
n
3
HIS
3
D
SER
4
n
4
SER
4
D
MET
5
n
5
MET
5
D
ARG
6
n
6
ARG
6
D
TYR
7
n
7
TYR
7
D
PHE
8
n
8
PHE
8
D
TYR
9
n
9
TYR
9
D
THR
10
n
10
THR
10
D
ALA
11
n
11
ALA
11
D
MET
12
n
12
MET
12
D
SER
13
n
13
SER
13
D
ARG
14
n
14
ARG
14
D
PRO
15
n
15
PRO
15
D
GLY
16
n
16
GLY
16
D
ARG
17
n
17
ARG
17
D
GLY
18
n
18
GLY
18
D
GLU
19
n
19
GLU
19
D
PRO
20
n
20
PRO
20
D
ARG
21
n
21
ARG
21
D
PHE
22
n
22
PHE
22
D
ILE
23
n
23
ILE
23
D
ALA
24
n
24
ALA
24
D
VAL
25
n
25
VAL
25
D
GLY
26
n
26
GLY
26
D
TYR
27
n
27
TYR
27
D
VAL
28
n
28
VAL
28
D
ASP
29
n
29
ASP
29
D
ASP
30
n
30
ASP
30
D
THR
31
n
31
THR
31
D
GLN
32
n
32
GLN
32
D
PHE
33
n
33
PHE
33
D
VAL
34
n
34
VAL
34
D
ARG
35
n
35
ARG
35
D
PHE
36
n
36
PHE
36
D
ASP
37
n
37
ASP
37
D
SER
38
n
38
SER
38
D
ASP
39
n
39
ASP
39
D
ALA
40
n
40
ALA
40
D
ALA
41
n
41
ALA
41
D
SER
42
n
42
SER
42
D
PRO
43
n
43
PRO
43
D
ARG
44
n
44
ARG
44
D
THR
45
n
45
THR
45
D
GLU
46
n
46
GLU
46
D
PRO
47
n
47
PRO
47
D
ARG
48
n
48
ARG
48
D
ALA
49
n
49
ALA
49
D
PRO
50
n
50
PRO
50
D
TRP
51
n
51
TRP
51
D
ILE
52
n
52
ILE
52
D
GLU
53
n
53
GLU
53
D
GLN
54
n
54
GLN
54
D
GLU
55
n
55
GLU
55
D
GLY
56
n
56
GLY
56
D
PRO
57
n
57
PRO
57
D
GLU
58
n
58
GLU
58
D
TYR
59
n
59
TYR
59
D
TRP
60
n
60
TRP
60
D
ASP
61
n
61
ASP
61
D
ARG
62
n
62
ARG
62
D
ASN
63
n
63
ASN
63
D
THR
64
n
64
THR
64
D
GLN
65
n
65
GLN
65
D
ILE
66
n
66
ILE
66
D
PHE
67
n
67
PHE
67
D
LYS
68
n
68
LYS
68
D
THR
69
n
69
THR
69
D
ASN
70
n
70
ASN
70
D
THR
71
n
71
THR
71
D
GLN
72
n
72
GLN
72
D
THR
73
n
73
THR
73
D
TYR
74
n
74
TYR
74
D
ARG
75
n
75
ARG
75
D
GLU
76
n
76
GLU
76
D
SER
77
n
77
SER
77
D
LEU
78
n
78
LEU
78
D
ARG
79
n
79
ARG
79
D
ASN
80
n
80
ASN
80
D
LEU
81
n
81
LEU
81
D
ARG
82
n
82
ARG
82
D
GLY
83
n
83
GLY
83
D
TYR
84
n
84
TYR
84
D
TYR
85
n
85
TYR
85
D
ASN
86
n
86
ASN
86
D
GLN
87
n
87
GLN
87
D
SER
88
n
88
SER
88
D
GLU
89
n
89
GLU
89
D
ALA
90
n
90
ALA
90
D
GLY
91
n
91
GLY
91
D
SER
92
n
92
SER
92
D
HIS
93
n
93
HIS
93
D
ILE
94
n
94
ILE
94
D
ILE
95
n
95
ILE
95
D
GLN
96
n
96
GLN
96
D
ARG
97
n
97
ARG
97
D
MET
98
n
98
MET
98
D
TYR
99
n
99
TYR
99
D
GLY
100
n
100
GLY
100
D
CYS
101
n
101
CYS
101
D
ASP
102
n
102
ASP
102
D
LEU
103
n
103
LEU
103
D
GLY
104
n
104
GLY
104
D
PRO
105
n
105
PRO
105
D
ASP
106
n
106
ASP
106
D
GLY
107
n
107
GLY
107
D
ARG
108
n
108
ARG
108
D
LEU
109
n
109
LEU
109
D
LEU
110
n
110
LEU
110
D
ARG
111
n
111
ARG
111
D
GLY
112
n
112
GLY
112
D
HIS
113
n
113
HIS
113
D
ASP
114
n
114
ASP
114
D
GLN
115
n
115
GLN
115
D
SER
116
n
116
SER
116
D
ALA
117
n
117
ALA
117
D
TYR
118
n
118
TYR
118
D
ASP
119
n
119
ASP
119
D
GLY
120
n
120
GLY
120
D
LYS
121
n
121
LYS
121
D
ASP
122
n
122
ASP
122
D
TYR
123
n
123
TYR
123
D
ILE
124
n
124
ILE
124
D
ALA
125
n
125
ALA
125
D
LEU
126
n
126
LEU
126
D
ASN
127
n
127
ASN
127
D
GLU
128
n
128
GLU
128
D
ASP
129
n
129
ASP
129
D
LEU
130
n
130
LEU
130
D
SER
131
n
131
SER
131
D
SER
132
n
132
SER
132
D
TRP
133
n
133
TRP
133
D
THR
134
n
134
THR
134
D
ALA
135
n
135
ALA
135
D
ALA
136
n
136
ALA
136
D
ASP
137
n
137
ASP
137
D
THR
138
n
138
THR
138
D
ALA
139
n
139
ALA
139
D
ALA
140
n
140
ALA
140
D
GLN
141
n
141
GLN
141
D
ILE
142
n
142
ILE
142
D
THR
143
n
143
THR
143
D
GLN
144
n
144
GLN
144
D
ARG
145
n
145
ARG
145
D
LYS
146
n
146
LYS
146
D
TRP
147
n
147
TRP
147
D
GLU
148
n
148
GLU
148
D
ALA
149
n
149
ALA
149
D
ALA
150
n
150
ALA
150
D
ARG
151
n
151
ARG
151
D
VAL
152
n
152
VAL
152
D
ALA
153
n
153
ALA
153
D
GLU
154
n
154
GLU
154
D
GLN
155
n
155
GLN
155
D
LEU
156
n
156
LEU
156
D
ARG
157
n
157
ARG
157
D
ALA
158
n
158
ALA
158
D
TYR
159
n
159
TYR
159
D
LEU
160
n
160
LEU
160
D
GLU
161
n
161
GLU
161
D
GLY
162
n
162
GLY
162
D
LEU
163
n
163
LEU
163
D
CYS
164
n
164
CYS
164
D
VAL
165
n
165
VAL
165
D
GLU
166
n
166
GLU
166
D
TRP
167
n
167
TRP
167
D
LEU
168
n
168
LEU
168
D
ARG
169
n
169
ARG
169
D
ARG
170
n
170
ARG
170
D
TYR
171
n
171
TYR
171
D
LEU
172
n
172
LEU
172
D
GLU
173
n
173
GLU
173
D
ASN
174
n
174
ASN
174
D
GLY
175
n
175
GLY
175
D
LYS
176
n
176
LYS
176
D
GLU
177
n
177
GLU
177
D
THR
178
n
178
THR
178
D
LEU
179
n
179
LEU
179
D
GLN
180
n
180
GLN
180
D
ARG
181
n
181
ARG
181
D
ALA
182
n
182
ALA
182
D
ASP
183
n
183
ASP
183
D
PRO
184
n
184
PRO
184
D
PRO
185
n
185
PRO
185
D
LYS
186
n
186
LYS
186
D
THR
187
n
187
THR
187
D
HIS
188
n
188
HIS
188
D
VAL
189
n
189
VAL
189
D
THR
190
n
190
THR
190
D
HIS
191
n
191
HIS
191
D
HIS
192
n
192
HIS
192
D
PRO
193
n
193
PRO
193
D
VAL
194
n
194
VAL
194
D
SER
195
n
195
SER
195
D
ASP
196
n
196
ASP
196
D
HIS
197
n
197
HIS
197
D
GLU
198
n
198
GLU
198
D
ALA
199
n
199
ALA
199
D
THR
200
n
200
THR
200
D
LEU
201
n
201
LEU
201
D
ARG
202
n
202
ARG
202
D
CYS
203
n
203
CYS
203
D
TRP
204
n
204
TRP
204
D
ALA
205
n
205
ALA
205
D
LEU
206
n
206
LEU
206
D
GLY
207
n
207
GLY
207
D
PHE
208
n
208
PHE
208
D
TYR
209
n
209
TYR
209
D
PRO
210
n
210
PRO
210
D
ALA
211
n
211
ALA
211
D
GLU
212
n
212
GLU
212
D
ILE
213
n
213
ILE
213
D
THR
214
n
214
THR
214
D
LEU
215
n
215
LEU
215
D
THR
216
n
216
THR
216
D
TRP
217
n
217
TRP
217
D
GLN
218
n
218
GLN
218
D
ARG
219
n
219
ARG
219
D
ASP
220
n
220
ASP
220
D
GLY
221
n
221
GLY
221
D
GLU
222
n
222
GLU
222
D
ASP
223
n
223
ASP
223
D
GLN
224
n
224
GLN
224
D
THR
225
n
225
THR
225
D
GLN
226
n
226
GLN
226
D
ASP
227
n
227
ASP
227
D
THR
228
n
228
THR
228
D
GLU
229
n
229
GLU
229
D
LEU
230
n
230
LEU
230
D
VAL
231
n
231
VAL
231
D
GLU
232
n
232
GLU
232
D
THR
233
n
233
THR
233
D
ARG
234
n
234
ARG
234
D
PRO
235
n
235
PRO
235
D
ALA
236
n
236
ALA
236
D
GLY
237
n
237
GLY
237
D
ASP
238
n
238
ASP
238
D
ARG
239
n
239
ARG
239
D
THR
240
n
240
THR
240
D
PHE
241
n
241
PHE
241
D
GLN
242
n
242
GLN
242
D
LYS
243
n
243
LYS
243
D
TRP
244
n
244
TRP
244
D
ALA
245
n
245
ALA
245
D
ALA
246
n
246
ALA
246
D
VAL
247
n
247
VAL
247
D
VAL
248
n
248
VAL
248
D
VAL
249
n
249
VAL
249
D
PRO
250
n
250
PRO
250
D
SER
251
n
251
SER
251
D
GLY
252
n
252
GLY
252
D
GLU
253
n
253
GLU
253
D
GLU
254
n
254
GLU
254
D
GLN
255
n
255
GLN
255
D
ARG
256
n
256
ARG
256
D
TYR
257
n
257
TYR
257
D
THR
258
n
258
THR
258
D
CYS
259
n
259
CYS
259
D
HIS
260
n
260
HIS
260
D
VAL
261
n
261
VAL
261
D
GLN
262
n
262
GLN
262
D
HIS
263
n
263
HIS
263
D
GLU
264
n
264
GLU
264
D
GLY
265
n
265
GLY
265
D
LEU
266
n
266
LEU
266
D
PRO
267
n
267
PRO
267
D
LYS
268
n
268
LYS
268
D
PRO
269
n
269
PRO
269
D
LEU
270
n
270
LEU
270
D
THR
271
n
271
THR
271
D
LEU
272
n
272
LEU
272
D
ARG
273
n
273
ARG
273
D
TRP
274
n
274
TRP
274
D
GLU
275
n
275
GLU
275
D
PRO
276
n
276
PRO
276
D
SER
277
n
277
SER
277
D
MET
1
n
1
MET
1
E
ILE
2
n
2
ILE
2
E
GLN
3
n
3
GLN
3
E
ARG
4
n
4
ARG
4
E
THR
5
n
5
THR
5
E
PRO
6
n
6
PRO
6
E
LYS
7
n
7
LYS
7
E
ILE
8
n
8
ILE
8
E
GLN
9
n
9
GLN
9
E
VAL
10
n
10
VAL
10
E
TYR
11
n
11
TYR
11
E
SER
12
n
12
SER
12
E
ARG
13
n
13
ARG
13
E
HIS
14
n
14
HIS
14
E
PRO
15
n
15
PRO
15
E
ALA
16
n
16
ALA
16
E
GLU
17
n
17
GLU
17
E
ASN
18
n
18
ASN
18
E
GLY
19
n
19
GLY
19
E
LYS
20
n
20
LYS
20
E
SER
21
n
21
SER
21
E
ASN
22
n
22
ASN
22
E
PHE
23
n
23
PHE
23
E
LEU
24
n
24
LEU
24
E
ASN
25
n
25
ASN
25
E
CYS
26
n
26
CYS
26
E
TYR
27
n
27
TYR
27
E
VAL
28
n
28
VAL
28
E
SER
29
n
29
SER
29
E
GLY
30
n
30
GLY
30
E
PHE
31
n
31
PHE
31
E
HIS
32
n
32
HIS
32
E
PRO
33
n
33
PRO
33
E
SER
34
n
34
SER
34
E
ASP
35
n
35
ASP
35
E
ILE
36
n
36
ILE
36
E
GLU
37
n
37
GLU
37
E
VAL
38
n
38
VAL
38
E
ASP
39
n
39
ASP
39
E
LEU
40
n
40
LEU
40
E
LEU
41
n
41
LEU
41
E
LYS
42
n
42
LYS
42
E
ASN
43
n
43
ASN
43
E
GLY
44
n
44
GLY
44
E
GLU
45
n
45
GLU
45
E
ARG
46
n
46
ARG
46
E
ILE
47
n
47
ILE
47
E
GLU
48
n
48
GLU
48
E
LYS
49
n
49
LYS
49
E
VAL
50
n
50
VAL
50
E
GLU
51
n
51
GLU
51
E
HIS
52
n
52
HIS
52
E
SER
53
n
53
SER
53
E
ASP
54
n
54
ASP
54
E
LEU
55
n
55
LEU
55
E
SER
56
n
56
SER
56
E
PHE
57
n
57
PHE
57
E
SER
58
n
58
SER
58
E
LYS
59
n
59
LYS
59
E
ASP
60
n
60
ASP
60
E
TRP
61
n
61
TRP
61
E
SER
62
n
62
SER
62
E
PHE
63
n
63
PHE
63
E
TYR
64
n
64
TYR
64
E
LEU
65
n
65
LEU
65
E
LEU
66
n
66
LEU
66
E
TYR
67
n
67
TYR
67
E
TYR
68
n
68
TYR
68
E
THR
69
n
69
THR
69
E
GLU
70
n
70
GLU
70
E
PHE
71
n
71
PHE
71
E
THR
72
n
72
THR
72
E
PRO
73
n
73
PRO
73
E
THR
74
n
74
THR
74
E
GLU
75
n
75
GLU
75
E
LYS
76
n
76
LYS
76
E
ASP
77
n
77
ASP
77
E
GLU
78
n
78
GLU
78
E
TYR
79
n
79
TYR
79
E
ALA
80
n
80
ALA
80
E
CYS
81
n
81
CYS
81
E
ARG
82
n
82
ARG
82
E
VAL
83
n
83
VAL
83
E
ASN
84
n
84
ASN
84
E
HIS
85
n
85
HIS
85
E
VAL
86
n
86
VAL
86
E
THR
87
n
87
THR
87
E
LEU
88
n
88
LEU
88
E
SER
89
n
89
SER
89
E
GLN
90
n
90
GLN
90
E
PRO
91
n
91
PRO
91
E
LYS
92
n
92
LYS
92
E
ILE
93
n
93
ILE
93
E
VAL
94
n
94
VAL
94
E
LYS
95
n
95
LYS
95
E
TRP
96
n
96
TRP
96
E
ASP
97
n
97
ASP
97
E
ARG
98
n
98
ARG
98
E
ASP
99
n
99
ASP
99
E
MET
100
n
100
MET
100
E
LEU
1
n
1
LEU
1
F
PRO
2
n
2
PRO
2
F
PRO
3
n
3
PRO
3
F
LEU
4
n
4
LEU
4
F
ASP
5
n
5
ASP
5
F
ILE
6
n
6
ILE
6
F
THR
7
n
7
THR
7
F
PRO
8
n
8
PRO
8
F
TYR
9
n
9
TYR
9
F
author_and_software_defined_assembly
PISA
3
trimeric
author_and_software_defined_assembly
PISA
3
trimeric
4460
-22
18570
4460
-22
18570
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
31
A
O
THR
31
A
N
VAL
28
A
N
VAL
28
A
O
ARG
21
A
O
ARG
21
A
N
MET
12
A
N
MET
12
A
O
HIS
3
A
O
HIS
3
A
N
LEU
103
A
N
LEU
103
A
O
GLN
96
A
O
GLN
96
A
N
ALA
117
A
N
ALA
117
A
O
SER
116
A
O
SER
116
A
N
ILE
124
A
N
ILE
124
A
O
ALA
125
A
O
ALA
125
A
N
THR
134
A
N
THR
134
A
O
LYS
186
A
O
LYS
186
A
N
LEU
206
A
N
LEU
206
A
O
ALA
199
A
O
ALA
199
A
N
VAL
249
A
N
VAL
249
A
O
THR
214
A
O
THR
214
A
N
GLN
262
A
N
GLN
262
A
O
CYS
259
A
O
CYS
259
A
N
LEU
272
A
N
LEU
272
B
O
LYS
7
B
O
LYS
7
B
N
SER
29
B
N
SER
29
B
O
ASN
22
B
O
ASN
22
B
N
PHE
71
B
N
PHE
71
B
O
GLU
37
B
O
GLU
37
B
N
ASN
84
B
N
ASN
84
B
O
CYS
81
B
O
CYS
81
B
N
VAL
94
B
N
VAL
94
C
O
PRO
3
C
O
PRO
3
C
N
ASP
5
C
N
ASP
5
D
O
THR
31
D
O
THR
31
D
N
VAL
28
D
N
VAL
28
D
O
ARG
21
D
O
ARG
21
D
N
MET
12
D
N
MET
12
D
O
HIS
3
D
O
HIS
3
D
N
LEU
103
D
N
LEU
103
D
O
GLN
96
D
O
GLN
96
D
N
ALA
117
D
N
ALA
117
D
O
SER
116
D
O
SER
116
D
N
ILE
124
D
N
ILE
124
D
O
ALA
125
D
O
ALA
125
D
N
THR
134
D
N
THR
134
D
O
LYS
186
D
O
LYS
186
D
N
LEU
206
D
N
LEU
206
D
O
ALA
199
D
O
ALA
199
D
N
VAL
249
D
N
VAL
249
D
O
THR
214
D
O
THR
214
D
N
GLN
262
D
N
GLN
262
D
O
CYS
259
D
O
CYS
259
D
N
LEU
272
D
N
LEU
272
E
O
LYS
7
E
O
LYS
7
E
N
SER
29
E
N
SER
29
E
O
ASN
22
E
O
ASN
22
E
N
PHE
71
E
N
PHE
71
E
O
GLU
37
E
O
GLU
37
E
N
ASN
84
E
N
ASN
84
E
O
CYS
81
E
O
CYS
81
E
N
VAL
94
E
N
VAL
94
1
A
ARG
14
-112.83
73.41
1
A
ASP
29
61.42
-128.81
1
A
PRO
43
-44.58
99.40
1
A
GLN
54
-68.62
2.38
1
A
GLU
89
-81.35
41.96
1
A
ARG
111
-174.36
130.01
1
A
SER
131
-143.83
-28.94
1
A
ALA
136
-79.00
-70.76
1
A
LEU
163
-39.78
-34.95
1
A
HIS
188
175.01
148.82
1
A
THR
225
-37.77
-39.82
1
A
THR
233
-50.16
103.60
1
A
ARG
239
92.98
-10.46
1
A
SER
251
-49.02
102.49
1
A
GLN
255
-59.81
-8.94
1
B
HIS
32
-174.67
135.68
1
B
GLU
48
-65.33
-95.59
1
B
THR
87
-69.23
3.57
1
B
ARG
98
-49.20
-11.00
1
D
ARG
14
-112.81
73.44
1
D
ASP
29
61.41
-128.80
1
D
PRO
43
-44.58
99.42
1
D
GLN
54
-68.57
2.38
1
D
GLU
89
-81.42
41.97
1
D
ARG
111
-174.37
130.02
1
D
SER
131
-143.92
-28.91
1
D
ALA
136
-79.04
-70.74
1
D
LEU
163
-39.81
-34.95
1
D
HIS
188
175.02
148.79
1
D
THR
225
-37.74
-39.80
1
D
THR
233
-50.12
103.62
1
D
ARG
239
93.04
-10.51
1
D
SER
251
-48.95
102.47
1
D
GLN
255
-59.91
-8.83
1
E
HIS
32
-174.71
135.64
1
E
GLU
48
-65.38
-95.61
1
E
THR
87
-69.32
3.70
1
E
ARG
98
-49.15
-11.04
PARHCSDX.PRO
TOPHCSDX.PRO
PARAM19.SOL
TOPH19.HIS
TOPH19.SOL
21.8
0.305
0.251
0.251
3.2
28.0
1376
13463
10.0
86.3
RANDOM
100000
0.1
1
GROUPED, UNRESTRAINED
MOLECULAR REPLACEMENT
1HHI
3.2
28.0
0
6340
0
0
6340
0.006
1.2
26.2
1.10
1
NCS RESTRAINTS
1
X-RAY DIFFRACTION
200000
0.377
0.305
3.31
152
1161
10
9.6
87.1
29.7
3.2
28.0
1A9B
13463
2
0.097
1
5.4
7.4
86.2
2.31
3.2
1.9
0.259
88.6
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS
1
N
N
2
N
N
3
N
N
1
N
N
2
N
N
3
N
N
THERE ARE TWO COMPLEXES PER ASYMMETRIC UNIT, EACH COMPOSED
OF THREE POLYPEPTIDE CHAINS. THEY ARE IDENTIFIED AS CHAIN
A, B, C FOR ONE COMPLEX AND CHAIN D, E, F FOR THE OTHER
COMPLEX.
CHAIN A AND D ARE HLA HEAVY CHAIN
CHAIN B AND E ARE BETA-2-MICROGLOBULIN
CHAIN C AND F ARE PEPTIDE FROM EBNA3C-PROTEIN FROM EBV
A
PRO
50
A
PRO
50
HELX_P
A
GLU
53
A
GLU
53
1
1
4
A
PRO
57
A
PRO
57
HELX_P
A
TYR
85
A
TYR
85
1
2
29
A
THR
138
A
THR
138
HELX_P
A
ALA
149
A
ALA
149
1
3
12
A
VAL
152
A
VAL
152
HELX_P
A
GLU
161
A
GLU
161
1
4
10
A
LEU
163
A
LEU
163
HELX_P
A
ASN
174
A
ASN
174
1
5
12
A
LYS
176
A
LYS
176
HELX_P
A
LEU
179
A
LEU
179
1
6
4
A
GLU
254
A
GLU
254
HELX_P
A
ARG
256
A
ARG
256
5
7
3
D
PRO
50
D
PRO
50
HELX_P
D
GLU
53
D
GLU
53
1
8
4
D
PRO
57
D
PRO
57
HELX_P
D
TYR
85
D
TYR
85
1
9
29
D
THR
138
D
THR
138
HELX_P
D
ALA
149
D
ALA
149
1
10
12
D
VAL
152
D
VAL
152
HELX_P
D
GLU
161
D
GLU
161
1
11
10
D
LEU
163
D
LEU
163
HELX_P
D
ASN
174
D
ASN
174
1
12
12
D
LYS
176
D
LYS
176
HELX_P
D
LEU
179
D
LEU
179
1
13
4
D
GLU
254
D
GLU
254
HELX_P
D
ARG
256
D
ARG
256
5
14
3
disulf
2.031
A
CYS
101
A
SG
CYS
101
1_555
A
CYS
164
A
SG
CYS
164
1_555
disulf
2.022
A
CYS
203
A
SG
CYS
203
1_555
A
CYS
259
A
SG
CYS
259
1_555
disulf
2.030
B
CYS
26
B
SG
CYS
26
1_555
B
CYS
81
B
SG
CYS
81
1_555
disulf
2.031
D
CYS
101
D
SG
CYS
101
1_555
D
CYS
164
D
SG
CYS
164
1_555
disulf
2.022
D
CYS
203
D
SG
CYS
203
1_555
D
CYS
259
D
SG
CYS
259
1_555
disulf
2.030
E
CYS
26
E
SG
CYS
26
1_555
E
CYS
81
E
SG
CYS
81
1_555
COMPLEX (MHC CLASS I/PEPTIDE)
MHC CLASS I, HISTOCOMPATIBILITY COMPLEX, HLA B3501, COMPLEX (MHC CLASS I-PEPTIDE), COMPLEX (MHC CLASS I-PEPTIDE) complex
A
TYR
209
A
TYR
209
1
A
PRO
210
A
PRO
210
-0.17
B
HIS
32
B
HIS
32
1
B
PRO
33
B
PRO
33
-0.74
D
TYR
209
D
TYR
209
1
D
PRO
210
D
PRO
210
-0.20
E
HIS
32
E
HIS
32
1
E
PRO
33
E
PRO
33
-0.74
given
-0.994400
-0.027050
-0.102190
0.030460
-0.999030
-0.031910
-0.101230
-0.034840
0.994250
51.33088
70.55732
3.18913
1B35_HUMAN
UNP
1
1
P30685
MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEG
PEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAA
DTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLT
WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAV
VVIGAVVATVMCRRKSSGGKGGSYSQAASSDSAQGSDVSLTA
B2MG_HUMAN
UNP
2
1
P61769
MSRSVALAVLALLSLSGLEAIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDW
SFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
1A9B
PDB
3
1A9B
25
301
1A9B
1
277
P30685
A
1
1
277
21
119
1A9B
2
100
P61769
B
2
2
100
25
301
1A9B
1
277
P30685
D
1
1
277
21
119
1A9B
2
100
P61769
E
2
2
100
1
9
1A9B
1
9
1A9B
C
3
1
9
1
9
1A9B
1
9
1A9B
F
3
1
9
7
3
3
3
3
2
7
3
3
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
31
A
THR
31
A
ASP
37
A
ASP
37
A
ARG
21
A
ARG
21
A
VAL
28
A
VAL
28
A
HIS
3
A
HIS
3
A
MET
12
A
MET
12
A
ILE
94
A
ILE
94
A
LEU
103
A
LEU
103
A
LEU
109
A
LEU
109
A
TYR
118
A
TYR
118
A
LYS
121
A
LYS
121
A
LEU
126
A
LEU
126
A
TRP
133
A
TRP
133
A
ALA
135
A
ALA
135
A
LYS
186
A
LYS
186
A
PRO
193
A
PRO
193
A
GLU
198
A
GLU
198
A
LEU
206
A
LEU
206
A
LYS
243
A
LYS
243
A
PRO
250
A
PRO
250
A
THR
214
A
THR
214
A
ARG
219
A
ARG
219
A
TYR
257
A
TYR
257
A
GLN
262
A
GLN
262
A
LEU
270
A
LEU
270
A
LEU
272
A
LEU
272
B
LYS
7
B
LYS
7
B
SER
12
B
SER
12
B
SER
21
B
SER
21
B
PHE
31
B
PHE
31
B
PHE
63
B
PHE
63
B
THR
72
B
THR
72
B
ILE
36
B
ILE
36
B
LYS
42
B
LYS
42
B
TYR
79
B
TYR
79
B
HIS
85
B
HIS
85
B
LYS
92
B
LYS
92
B
LYS
95
B
LYS
95
C
PRO
3
C
PRO
3
C
ASP
5
C
ASP
5
C
LEU
4
C
LEU
4
C
ILE
6
C
ILE
6
D
THR
31
D
THR
31
D
ASP
37
D
ASP
37
D
ARG
21
D
ARG
21
D
VAL
28
D
VAL
28
D
HIS
3
D
HIS
3
D
MET
12
D
MET
12
D
ILE
94
D
ILE
94
D
LEU
103
D
LEU
103
D
LEU
109
D
LEU
109
D
TYR
118
D
TYR
118
D
LYS
121
D
LYS
121
D
LEU
126
D
LEU
126
D
TRP
133
D
TRP
133
D
ALA
135
D
ALA
135
D
LYS
186
D
LYS
186
D
PRO
193
D
PRO
193
D
GLU
198
D
GLU
198
D
LEU
206
D
LEU
206
D
LYS
243
D
LYS
243
D
PRO
250
D
PRO
250
D
THR
214
D
THR
214
D
ARG
219
D
ARG
219
D
TYR
257
D
TYR
257
D
GLN
262
D
GLN
262
D
LEU
270
D
LEU
270
D
LEU
272
D
LEU
272
E
LYS
7
E
LYS
7
E
SER
12
E
SER
12
E
SER
21
E
SER
21
E
PHE
31
E
PHE
31
E
PHE
63
E
PHE
63
E
THR
72
E
THR
72
E
ILE
36
E
ILE
36
E
LYS
42
E
LYS
42
E
TYR
79
E
TYR
79
E
HIS
85
E
HIS
85
E
LYS
92
E
LYS
92
E
LYS
95
E
LYS
95
19
P 21 21 21