1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Summers, M.F. Henderson, L.E. Chance, M.R. Bess Junior, J.W. South, T.L. Blake, P.R. Sagi, I. Perez-Alvarado, G. Sowder, R.C. Hare, D.R. Arthur, L.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 S C N 163 N C N 164 N C N 165 N C N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N C N 186 N C N 187 N C N 188 N N N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N S N 212 N C N 213 N O N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N N N 226 S C N 227 N C N 228 N O N 229 N C Y 230 N C Y 231 N C Y 232 N C Y 233 N C Y 234 N C Y 235 N C N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C N 253 N C N 254 N C N 255 N O N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 R C N 270 N O N 271 N C N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N N Y 291 N C Y 292 N C Y 293 N C Y 294 N C Y 295 N C N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing Y 225 N doub Y 226 N sing Y 227 N sing N 228 N sing Y 229 N doub N 230 N sing Y 231 N doub N 232 N sing Y 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing Y 281 N doub Y 282 N sing Y 283 N sing N 284 N sing Y 285 N doub Y 286 N sing Y 287 N sing N 288 N sing Y 289 N sing Y 290 N doub N 291 N sing Y 292 N doub N 293 N sing Y 294 N sing N 295 N sing N 296 N sing N 297 N sing US Protein Sci. PRCIEI 0795 0961-8368 1 563 574 1304355 Nucleocapsid zinc fingers detected in retroviruses: EXAFS studies of intact viruses and the solution-state structure of the nucleocapsid protein from HIV-1. 1992 10.2210/pdb1aaf/pdb pdb_00001aaf 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 6468.604 HIV-1 NUCLEOCAPSID PROTEIN 1 man polymer 65.409 ZINC ION 2 syn non-polymer no no MQRGNFRNQRKIIKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQAN MQRGNFRNQRKIIKCFNCGKEGHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQAN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus M/B_MN Escherichia sample 11696 Human immunodeficiency virus 1 562 Escherichia coli chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Other 1 0 1994-01-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-04-10 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1992-04-06 REL ZN ZINC ION 20 ZN 56 2 ZN ZN 56 A ZN 57 2 ZN ZN 57 A MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A ARG 3 n 3 ARG 3 A GLY 4 n 4 GLY 4 A ASN 5 n 5 ASN 5 A PHE 6 n 6 PHE 6 A ARG 7 n 7 ARG 7 A ASN 8 n 8 ASN 8 A GLN 9 n 9 GLN 9 A ARG 10 n 10 ARG 10 A LYS 11 n 11 LYS 11 A ILE 12 n 12 ILE 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A CYS 15 n 15 CYS 15 A PHE 16 n 16 PHE 16 A ASN 17 n 17 ASN 17 A CYS 18 n 18 CYS 18 A GLY 19 n 19 GLY 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A GLY 22 n 22 GLY 22 A HIS 23 n 23 HIS 23 A ILE 24 n 24 ILE 24 A ALA 25 n 25 ALA 25 A LYS 26 n 26 LYS 26 A ASN 27 n 27 ASN 27 A CYS 28 n 28 CYS 28 A ARG 29 n 29 ARG 29 A ALA 30 n 30 ALA 30 A PRO 31 n 31 PRO 31 A ARG 32 n 32 ARG 32 A LYS 33 n 33 LYS 33 A ARG 34 n 34 ARG 34 A GLY 35 n 35 GLY 35 A CYS 36 n 36 CYS 36 A TRP 37 n 37 TRP 37 A LYS 38 n 38 LYS 38 A CYS 39 n 39 CYS 39 A GLY 40 n 40 GLY 40 A LYS 41 n 41 LYS 41 A GLU 42 n 42 GLU 42 A GLY 43 n 43 GLY 43 A HIS 44 n 44 HIS 44 A GLN 45 n 45 GLN 45 A MET 46 n 46 MET 46 A LYS 47 n 47 LYS 47 A ASP 48 n 48 ASP 48 A CYS 49 n 49 CYS 49 A THR 50 n 50 THR 50 A GLU 51 n 51 GLU 51 A ARG 52 n 52 ARG 52 A GLN 53 n 53 GLN 53 A ALA 54 n 54 ALA 54 A ASN 55 n 55 ASN 55 A author_defined_assembly 1 monomeric A CYS 15 A SG CYS 15 1_555 A ZN 56 B ZN ZN 1_555 A CYS 18 A SG CYS 18 1_555 106.7 A CYS 15 A SG CYS 15 1_555 A ZN 56 B ZN ZN 1_555 A HIS 23 A NE2 HIS 23 1_555 93.4 A CYS 18 A SG CYS 18 1_555 A ZN 56 B ZN ZN 1_555 A HIS 23 A NE2 HIS 23 1_555 94.3 A CYS 15 A SG CYS 15 1_555 A ZN 56 B ZN ZN 1_555 A CYS 28 A SG CYS 28 1_555 115.6 A CYS 18 A SG CYS 18 1_555 A ZN 56 B ZN ZN 1_555 A CYS 28 A SG CYS 28 1_555 124.3 A HIS 23 A NE2 HIS 23 1_555 A ZN 56 B ZN ZN 1_555 A CYS 28 A SG CYS 28 1_555 116.5 A CYS 36 A SG CYS 36 1_555 A ZN 57 C ZN ZN 1_555 A CYS 39 A SG CYS 39 1_555 106.9 A CYS 36 A SG CYS 36 1_555 A ZN 57 C ZN ZN 1_555 A HIS 44 A NE2 HIS 44 1_555 93.7 A CYS 39 A SG CYS 39 1_555 A ZN 57 C ZN ZN 1_555 A HIS 44 A NE2 HIS 44 1_555 93.6 A CYS 36 A SG CYS 36 1_555 A ZN 57 C ZN ZN 1_555 A CYS 49 A SG CYS 49 1_555 109.4 A CYS 39 A SG CYS 39 1_555 A ZN 57 C ZN ZN 1_555 A CYS 49 A SG CYS 49 1_555 142.4 A HIS 44 A NE2 HIS 44 1_555 A ZN 57 C ZN ZN 1_555 A CYS 49 A SG CYS 49 1_555 93.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CYS 15 -11.72 2 A HIS 44 -11.56 4 A ARG 29 -10.08 5 A CYS 15 -11.37 5 A ARG 29 -10.98 8 A THR 50 -12.19 10 A LYS 14 13.68 11 A CYS 36 -11.69 11 A TRP 37 10.32 12 A CYS 15 -11.44 12 A THR 50 -10.41 13 A CYS 15 -11.44 13 A THR 50 -10.41 14 A LYS 33 11.74 14 A THR 50 -10.16 15 A CYS 15 -10.90 16 A CYS 15 -10.26 16 A ALA 25 -10.66 16 A CYS 36 -10.65 17 A CYS 15 -13.06 17 A ALA 25 -11.16 17 A TRP 37 10.12 18 A CYS 15 -11.19 18 A ARG 29 -11.76 18 A CYS 36 -11.52 19 A CYS 15 -10.69 19 A HIS 44 -10.42 20 A CYS 15 -10.05 20 A CYS 36 -10.65 20 A TRP 37 10.36 20 A HIS 44 -11.78 20 A ALA 54 10.65 1 A GLN 2 59.72 -178.01 1 A PHE 6 178.34 151.54 1 A ARG 7 -177.42 -33.18 1 A ASN 8 -62.00 87.17 1 A GLN 9 -84.72 -78.86 1 A ARG 10 62.16 -83.36 1 A LYS 11 62.58 93.94 1 A ILE 12 -98.17 40.94 1 A LYS 14 179.67 104.23 1 A GLU 51 58.72 -84.31 1 A ARG 52 -175.67 144.17 1 A GLN 53 -154.95 24.60 1 A ALA 54 61.47 -162.61 2 A GLN 2 66.96 128.87 2 A ARG 3 61.79 100.30 2 A ASN 5 68.68 74.54 2 A PHE 6 179.51 179.96 2 A ARG 7 61.69 179.58 2 A ASN 8 69.33 84.01 2 A GLN 9 -145.64 -43.16 2 A ARG 10 64.80 -66.86 2 A LYS 11 64.20 102.87 2 A ILE 12 -164.92 -50.89 2 A ARG 29 -95.29 33.00 2 A PRO 31 -80.91 -120.30 2 A ARG 32 -175.56 98.73 2 A ARG 34 -138.66 -79.02 2 A GLU 51 57.66 -84.74 2 A GLN 53 -86.44 -71.82 3 A GLN 2 61.91 178.41 3 A ASN 5 -173.02 109.06 3 A GLN 9 -170.59 141.22 3 A ILE 13 -59.73 93.58 3 A LYS 14 -166.39 115.23 3 A ARG 32 67.22 144.30 3 A LYS 33 -170.28 -76.52 3 A ARG 34 179.84 -176.01 3 A LYS 38 -95.88 -64.90 3 A HIS 44 174.37 -174.95 3 A ARG 52 64.45 -167.30 3 A GLN 53 -104.17 -84.10 3 A ALA 54 61.51 -168.80 4 A ASN 5 66.71 84.68 4 A GLN 9 -103.67 -84.51 4 A ARG 10 64.71 138.43 4 A LYS 11 63.78 151.67 4 A PRO 31 -80.79 -143.68 4 A ARG 32 65.58 81.29 4 A LYS 33 -179.48 142.24 4 A ARG 34 64.65 178.57 4 A GLU 42 -112.94 77.62 4 A HIS 44 178.31 112.31 4 A GLU 51 -170.97 -157.38 4 A ARG 52 64.12 84.43 4 A GLN 53 -165.18 69.11 5 A GLN 2 -99.77 38.47 5 A ARG 3 63.94 99.69 5 A ARG 29 -103.26 40.42 5 A ARG 32 60.96 -174.96 5 A LYS 33 -175.50 -168.54 5 A ARG 34 -62.57 85.27 5 A TRP 37 -96.99 31.20 5 A LYS 38 -121.76 -62.70 5 A HIS 44 179.77 159.59 5 A THR 50 -153.90 32.83 5 A ARG 52 60.91 -165.73 5 A GLN 53 -97.78 44.19 5 A ALA 54 61.59 163.67 6 A GLN 2 -167.04 36.44 6 A ASN 5 66.25 143.76 6 A PHE 6 -95.11 -72.32 6 A GLN 9 -161.65 99.15 6 A ARG 10 -64.10 -168.90 6 A ILE 13 -171.23 111.63 6 A PRO 31 -80.56 -151.64 6 A ARG 52 -109.84 -80.92 6 A ALA 54 -122.99 -53.01 7 A GLN 2 61.83 73.81 7 A ASN 8 -135.73 -81.50 7 A GLN 9 59.94 -172.47 7 A ARG 10 64.87 125.17 7 A LYS 14 54.42 99.03 7 A ARG 29 -96.09 33.53 7 A TRP 37 -97.59 31.20 7 A ALA 54 -139.78 -72.22 8 A ASN 5 68.65 123.08 8 A ARG 7 64.73 89.66 8 A ASN 8 62.17 -177.47 8 A GLN 9 -179.47 -78.54 8 A ARG 10 65.87 152.50 8 A ILE 12 64.65 71.73 8 A LYS 33 -163.08 119.81 8 A GLU 51 60.90 -67.94 8 A ARG 52 58.46 170.14 8 A GLN 53 178.92 -34.96 8 A ALA 54 61.82 -82.69 9 A ARG 3 65.07 122.70 9 A ASN 5 -172.97 120.06 9 A PHE 6 -179.35 -74.44 9 A ARG 7 63.91 171.60 9 A ILE 12 -109.69 -150.07 9 A LYS 14 179.40 164.16 9 A ARG 29 -95.79 49.97 9 A ARG 32 -102.86 -82.52 9 A LYS 33 177.98 -33.74 9 A GLU 51 57.67 -87.88 9 A ARG 52 -79.63 -76.89 9 A GLN 53 -174.60 -51.90 9 A ALA 54 61.53 92.52 10 A ARG 3 -62.28 98.05 10 A ARG 7 63.50 84.22 10 A GLN 9 -171.74 116.47 10 A ARG 10 -71.60 -167.06 10 A LYS 11 -61.81 -175.07 10 A LYS 14 53.95 167.67 10 A PRO 31 -65.89 -162.94 10 A ARG 32 -171.53 116.11 10 A LYS 33 64.99 142.49 10 A ARG 34 -178.82 -176.52 10 A GLU 51 57.77 173.49 10 A ARG 52 179.08 115.47 10 A GLN 53 -98.17 37.89 11 A GLN 2 -62.08 -87.45 11 A ARG 3 61.85 -169.71 11 A ASN 5 61.75 -172.81 11 A ARG 7 -174.78 -35.65 11 A ILE 12 -98.72 31.76 11 A LYS 14 178.31 165.68 11 A ARG 29 -103.79 62.11 11 A ARG 32 178.80 138.93 11 A LYS 33 62.60 -164.77 11 A ARG 34 68.48 147.54 11 A GLU 42 -108.76 45.13 11 A GLN 45 -122.84 -165.56 11 A GLN 53 -175.97 -82.42 11 A ALA 54 62.47 -85.27 12 A GLN 2 -163.14 25.03 12 A ASN 5 -172.93 116.59 12 A PHE 6 -176.56 100.55 12 A GLN 9 -101.29 -165.45 12 A ARG 10 -130.43 -81.34 12 A LYS 11 61.43 107.59 12 A ILE 13 -176.56 56.32 12 A LYS 14 56.12 172.95 12 A ARG 32 179.95 77.44 12 A GLU 42 -98.67 33.42 12 A HIS 44 179.89 162.33 12 A THR 50 -96.22 31.44 12 A GLU 51 58.02 169.82 12 A ALA 54 -120.40 -162.50 13 A GLN 2 -163.14 25.03 13 A ASN 5 -172.93 116.59 13 A PHE 6 -176.56 100.55 13 A GLN 9 -101.29 -165.45 13 A ARG 10 -130.43 -81.34 13 A LYS 11 61.43 107.59 13 A ILE 13 -176.56 56.32 13 A LYS 14 56.12 172.95 13 A ARG 32 179.95 77.44 13 A GLU 42 -98.67 33.42 13 A HIS 44 179.89 162.33 13 A THR 50 -96.22 31.44 13 A GLU 51 58.02 169.82 13 A ALA 54 -120.40 -162.50 14 A GLN 2 -158.97 -79.15 14 A ASN 5 69.41 95.66 14 A PHE 6 70.71 126.16 14 A ARG 7 -62.02 97.07 14 A GLN 9 -124.54 -86.45 14 A LYS 11 179.29 -168.82 14 A ASN 27 -97.64 30.63 14 A PRO 31 -83.52 -136.38 14 A ARG 34 56.50 -175.78 14 A TRP 37 -98.77 34.74 14 A GLN 45 -116.28 -168.29 14 A ASP 48 -98.80 30.90 14 A THR 50 -95.99 33.32 14 A GLU 51 -61.45 -168.86 14 A ARG 52 -158.57 33.26 14 A ALA 54 -174.79 122.05 15 A GLN 2 65.36 69.61 15 A ASN 5 -108.63 -78.73 15 A ARG 10 -66.24 -80.36 15 A LYS 11 61.81 -169.65 15 A ILE 12 -175.79 65.62 15 A LYS 14 178.69 144.26 15 A ARG 29 -100.29 66.19 15 A LYS 33 -65.10 88.51 15 A ARG 52 61.35 106.59 15 A GLN 53 -135.60 -45.53 15 A ALA 54 61.58 97.90 16 A GLN 2 69.02 -72.29 16 A PHE 6 175.00 -174.82 16 A ARG 7 -179.30 138.53 16 A ASN 8 -170.91 120.51 16 A GLN 9 67.64 158.45 16 A ARG 10 -169.03 29.85 16 A PRO 31 -64.61 -170.36 16 A ARG 32 65.94 72.43 16 A LYS 33 -178.31 79.65 16 A ARG 34 -175.36 143.02 16 A LYS 38 -92.12 -70.73 16 A HIS 44 179.37 -179.90 16 A GLU 51 58.55 -87.96 16 A ALA 54 61.52 -175.88 17 A GLN 2 61.85 -166.01 17 A ARG 3 65.52 -78.28 17 A PHE 6 -100.84 -80.78 17 A ARG 7 61.58 86.05 17 A ARG 29 -102.52 68.56 17 A ARG 32 -123.43 -163.79 17 A HIS 44 -178.83 -176.72 17 A ASP 48 -143.90 35.04 17 A GLN 53 69.83 -165.96 17 A ALA 54 61.78 159.76 18 A GLN 2 69.42 -65.67 18 A ARG 3 64.50 114.48 18 A ASN 5 -173.11 84.86 18 A ARG 7 -136.31 -81.10 18 A ASN 8 61.33 82.47 18 A ARG 10 -147.00 30.30 18 A LYS 11 -163.49 22.13 18 A ILE 13 -160.46 84.98 18 A ARG 29 -108.34 45.04 18 A GLU 51 -94.46 46.44 18 A ALA 54 61.53 177.01 19 A ASN 5 -65.47 -167.86 19 A PHE 6 -68.86 82.18 19 A ASN 8 69.66 141.51 19 A GLN 9 -101.96 -167.02 19 A ARG 10 62.72 -175.13 19 A LYS 11 -175.42 110.01 19 A ILE 12 -128.24 -52.14 19 A ARG 34 -123.22 -166.68 19 A ASP 48 -141.55 30.80 20 A GLN 2 -157.96 38.80 20 A ARG 7 63.43 98.43 20 A ASN 8 -170.11 -45.27 20 A GLN 9 69.03 -172.64 20 A ILE 12 -157.57 -44.30 20 A LYS 14 179.02 108.45 20 A GLU 21 -79.29 -159.09 20 A LYS 38 -75.47 -70.05 20 A GLU 51 57.25 -159.29 20 A ALA 54 -131.30 -47.03 NUCLEOCAPSID ZINC FINGERS DETECTED IN RETROVIRUSES: EXAFS STUDIES ON INTACT VIRUSES AND THE SOLUTION-STATE STRUCTURE OF THE NUCLEOCAPSID PROTEIN FROM HIV-1 1 Y N 2 N N 2 N N A ILE 24 A ILE 24 HELX_P A CYS 28 A CYS 28 5 1 5 A GLN 45 A GLN 45 HELX_P A CYS 49 A CYS 49 5 2 5 metalc 2.307 A CYS 15 A SG CYS 15 1_555 A ZN 56 B ZN ZN 1_555 metalc 2.300 A CYS 18 A SG CYS 18 1_555 A ZN 56 B ZN ZN 1_555 metalc 2.011 A HIS 23 A NE2 HIS 23 1_555 A ZN 56 B ZN ZN 1_555 metalc 2.297 A CYS 28 A SG CYS 28 1_555 A ZN 56 B ZN ZN 1_555 metalc 2.302 A CYS 36 A SG CYS 36 1_555 A ZN 57 C ZN ZN 1_555 metalc 2.300 A CYS 39 A SG CYS 39 1_555 A ZN 57 C ZN ZN 1_555 metalc 2.010 A HIS 44 A NE2 HIS 44 1_555 A ZN 57 C ZN ZN 1_555 metalc 2.302 A CYS 49 A SG CYS 49 1_555 A ZN 57 C ZN ZN 1_555 VIRAL PROTEIN Viral protein POL_HV1MN UNP 1 1 P05961 GARASVLSGGELDRWEKIRLRPGGKKKYKLKHVVWASRELERFAINPGLLETSEGCRQILGQLQPSLQTGSEERKSLYNT VATLYCVHQKIKIKDTKEALEKIEEEQNKSKKKAQQAAADTGNRGNSSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKV VEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAHAGPIAPGQMREPRGSDIAG TTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPSSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMT ETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIIKCFNCGKE GHIAKNCRAPRKRGCWKCGKEGHQMKDCTERQANFLGKIWPSCKGRPGNFPQSRTEPTAPPEESFRFGEETTTPYQKQEK KQETIDKDLYPLASLKSLFGNDPLSQ 380 434 1AAF 1 55 P05961 A 1 1 55 BINDING SITE FOR RESIDUE ZN A 56 A ZN 56 Software 4 BINDING SITE FOR RESIDUE ZN A 57 A ZN 57 Software 4 A CYS 15 A CYS 15 4 1_555 A CYS 18 A CYS 18 4 1_555 A HIS 23 A HIS 23 4 1_555 A CYS 28 A CYS 28 4 1_555 A CYS 36 A CYS 36 4 1_555 A CYS 39 A CYS 39 4 1_555 A HIS 44 A HIS 44 4 1_555 A CYS 49 A CYS 49 4 1_555 1 P 1