0.022026 0.000000 0.000000 0.000000 0.017794 0.000000 0.000000 0.000000 0.007645 0.00000 0.00000 0.00000 Elrod-Erickson, M. Rould, M.A. Pabo, C.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 45.400 56.200 130.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer UK Structure STRUE6 2005 0969-2126 4 1171 1180 10.1016/S0969-2126(96)00125-6 8939742 Zif268 protein-DNA complex refined at 1.6 A: a model system for understanding zinc finger-DNA interactions. 1996 US Science SCIEAS 0038 0036-8075 252 809 Zinc Finger-DNA Recognition: Crystal Structure of a Zif268-DNA Complex at 2.1 A 1991 10.2210/pdb1aay/pdb pdb_00001aay 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 295.00 1 YALE MIRRORS IMAGE PLATE 1994-08-01 RIGAKU RAXIS IIC M x-ray 1 1.0 ROTATING ANODE RIGAKU RU200 3430.233 DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3') 1 syn polymer 3279.151 DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3') 1 syn polymer 10853.498 PROTEIN (ZIF268 ZINC FINGER PEPTIDE) 1 man polymer 65.409 ZINC ION 3 syn non-polymer 18.015 water 148 nat water no no (DA)(DG)(DC)(DG)(DT)(DG)(DG)(DG)(DC)(DG)(DT) AGCGTGGGCGT B polydeoxyribonucleotide no no (DT)(DA)(DC)(DG)(DC)(DC)(DC)(DA)(DC)(DG)(DC) TACGCCCACGC C polydeoxyribonucleotide no no MERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR HTKIHLRQKD MERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR HTKIHLRQKD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21 (DE3) PZIF89 3 2.40 55.3000 VAPOR DIFFUSION, HANGING DROP 8.0 2.5-5% PEG 400; 500-700MM NACL; 25MM BIS-TRIS PROPANE, PH 8.0, VAPOR DIFFUSION, HANGING DROP WATER 1 NACL 1 BIS-TRIS-PROPANE_HCL 1 WATER 2 PEG 400 2 -8.167 1 19 B 2 C 61 1.426 B_DG2:DC61_C 1 -1.965 -0.130 -0.276 -0.165 10.040 1 19 B 3 C 60 0.470 B_DC3:DG60_C 2 -6.567 0.415 -0.301 -0.152 -1.702 1 19 B 4 C 59 -1.835 B_DG4:DC59_C 3 -6.214 -0.263 0.108 -0.220 0.277 1 20 B 5 C 58 -0.008 B_DT5:DA58_C 4 -6.127 -0.084 -0.022 -0.230 3.146 1 19 B 6 C 57 1.417 B_DG6:DC57_C 5 -10.430 -0.310 0.114 -0.134 -3.966 1 19 B 7 C 56 -2.316 B_DG7:DC56_C 6 -9.233 -0.307 -0.101 -0.161 -3.668 1 19 B 8 C 55 -1.143 B_DG8:DC55_C 7 -13.523 -0.219 -0.105 -0.216 3.223 1 19 B 9 C 54 -0.791 B_DC9:DG54_C 8 -5.272 0.255 -0.269 -0.133 3.612 1 19 B 10 C 53 -3.186 B_DG10:DC53_C 9 -8.114 -0.086 -0.025 -0.213 6.529 1 20 B 11 C 52 2.635 B_DT11:DA52_C 10 -7.147 0.053 -0.320 -0.233 2.807 26.608 B B 2 3 12.450 C C 61 60 2.898 5.687 0.330 -0.169 BB_DG2DC3:DG60DC61_CC 1 0.825 -1.807 25.991 -1.685 -0.526 3.487 37.650 B B 3 4 12.276 C C 60 59 3.487 7.822 -0.946 -0.209 BB_DC3DG4:DC59DG60_CC 2 -7.226 11.341 36.165 -1.430 0.444 3.302 28.454 B B 4 5 11.255 C C 59 58 3.465 5.497 0.537 -0.630 BB_DG4DT5:DA58DC59_CC 3 1.241 -2.540 27.902 -2.597 -0.795 3.385 34.732 B B 5 6 5.870 C C 58 57 3.305 3.485 -0.943 -0.106 BB_DT5DG6:DC57DA58_CC 4 -5.551 9.352 34.127 -0.728 0.703 3.441 30.809 B B 6 7 6.190 C C 57 56 3.541 3.282 -0.811 -0.933 BB_DG6DG7:DC56DC57_CC 5 -0.664 1.252 30.631 -2.442 1.387 3.142 36.923 B B 7 8 17.730 C C 56 55 3.398 11.062 -0.076 -0.375 BB_DG7DG8:DC55DC56_CC 6 -2.042 3.272 35.225 -2.125 -0.163 3.234 30.937 B B 8 9 -4.100 C C 55 54 3.176 -2.183 0.706 -0.271 BB_DG8DC9:DG54DC55_CC 7 2.519 -4.732 30.761 -0.094 -0.844 3.489 34.480 B B 9 10 10.292 C C 54 53 3.370 6.054 -1.138 0.307 BB_DC9DG10:DC53DG54_CC 8 -4.495 7.642 33.670 -0.480 1.179 3.386 31.544 B B 10 11 3.950 C C 53 52 3.367 2.144 1.053 -0.529 BB_DG10DT11:DA52DC53_CC 9 2.084 -3.839 31.405 -1.386 -1.535 database_2 pdbx_initial_refinement_model struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Refinement description 1 0 1997-04-21 1 1 2008-05-22 1 2 2011-07-13 1 3 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id NDB Y NDB 1997-01-18 REL ZN ZINC ION HOH water 1ZAA PDB ENTRY 1ZAA, WITHOUT WATERS PDB experimental model ZN 201 4 ZN ZN 201 A ZN 202 4 ZN ZN 202 A ZN 203 4 ZN ZN 203 A HOH 205 5 HOH HOH 205 B HOH 206 5 HOH HOH 206 B HOH 208 5 HOH HOH 208 B HOH 209 5 HOH HOH 209 B HOH 211 5 HOH HOH 211 B HOH 214 5 HOH HOH 214 B HOH 216 5 HOH HOH 216 B HOH 221 5 HOH HOH 221 B HOH 231 5 HOH HOH 231 B HOH 247 5 HOH HOH 247 B HOH 250 5 HOH HOH 250 B HOH 252 5 HOH HOH 252 B HOH 254 5 HOH HOH 254 B HOH 262 5 HOH HOH 262 B HOH 263 5 HOH HOH 263 B HOH 264 5 HOH HOH 264 B HOH 274 5 HOH HOH 274 B HOH 276 5 HOH HOH 276 B HOH 277 5 HOH HOH 277 B HOH 285 5 HOH HOH 285 B HOH 294 5 HOH HOH 294 B HOH 295 5 HOH HOH 295 B HOH 296 5 HOH HOH 296 B HOH 303 5 HOH HOH 303 B HOH 313 5 HOH HOH 313 B HOH 324 5 HOH HOH 324 B HOH 329 5 HOH HOH 329 B HOH 330 5 HOH HOH 330 B HOH 341 5 HOH HOH 341 B HOH 342 5 HOH HOH 342 B HOH 357 5 HOH HOH 357 B HOH 366 5 HOH HOH 366 B HOH 229 5 HOH HOH 229 C HOH 244 5 HOH HOH 244 C HOH 245 5 HOH HOH 245 C HOH 246 5 HOH HOH 246 C HOH 251 5 HOH HOH 251 C HOH 256 5 HOH HOH 256 C HOH 259 5 HOH HOH 259 C HOH 266 5 HOH HOH 266 C HOH 268 5 HOH HOH 268 C HOH 269 5 HOH HOH 269 C HOH 297 5 HOH HOH 297 C HOH 305 5 HOH HOH 305 C HOH 317 5 HOH HOH 317 C HOH 319 5 HOH HOH 319 C HOH 321 5 HOH HOH 321 C HOH 337 5 HOH HOH 337 C HOH 343 5 HOH HOH 343 C HOH 352 5 HOH HOH 352 C HOH 365 5 HOH HOH 365 C HOH 367 5 HOH HOH 367 C HOH 368 5 HOH HOH 368 C HOH 369 5 HOH HOH 369 C HOH 370 5 HOH HOH 370 C HOH 371 5 HOH HOH 371 C HOH 374 5 HOH HOH 374 C HOH 377 5 HOH HOH 377 C HOH 379 5 HOH HOH 379 C HOH 380 5 HOH HOH 380 C HOH 204 5 HOH HOH 204 A HOH 210 5 HOH HOH 210 A HOH 212 5 HOH HOH 212 A HOH 213 5 HOH HOH 213 A HOH 215 5 HOH HOH 215 A HOH 217 5 HOH HOH 217 A HOH 218 5 HOH HOH 218 A HOH 219 5 HOH HOH 219 A HOH 222 5 HOH HOH 222 A HOH 223 5 HOH HOH 223 A HOH 224 5 HOH HOH 224 A HOH 225 5 HOH HOH 225 A HOH 226 5 HOH HOH 226 A HOH 227 5 HOH HOH 227 A HOH 228 5 HOH HOH 228 A HOH 230 5 HOH HOH 230 A HOH 232 5 HOH HOH 232 A HOH 233 5 HOH HOH 233 A HOH 234 5 HOH HOH 234 A HOH 237 5 HOH HOH 237 A HOH 238 5 HOH HOH 238 A HOH 239 5 HOH HOH 239 A HOH 240 5 HOH HOH 240 A HOH 241 5 HOH HOH 241 A HOH 242 5 HOH HOH 242 A HOH 255 5 HOH HOH 255 A HOH 257 5 HOH HOH 257 A HOH 258 5 HOH HOH 258 A HOH 260 5 HOH HOH 260 A HOH 261 5 HOH HOH 261 A HOH 265 5 HOH HOH 265 A HOH 267 5 HOH HOH 267 A HOH 270 5 HOH HOH 270 A HOH 271 5 HOH HOH 271 A HOH 272 5 HOH HOH 272 A HOH 279 5 HOH HOH 279 A HOH 280 5 HOH HOH 280 A HOH 281 5 HOH HOH 281 A HOH 282 5 HOH HOH 282 A HOH 286 5 HOH HOH 286 A HOH 287 5 HOH HOH 287 A HOH 288 5 HOH HOH 288 A HOH 291 5 HOH HOH 291 A HOH 298 5 HOH HOH 298 A HOH 299 5 HOH HOH 299 A HOH 300 5 HOH HOH 300 A HOH 301 5 HOH HOH 301 A HOH 302 5 HOH HOH 302 A HOH 304 5 HOH HOH 304 A HOH 306 5 HOH HOH 306 A HOH 307 5 HOH HOH 307 A HOH 308 5 HOH HOH 308 A HOH 309 5 HOH HOH 309 A HOH 310 5 HOH HOH 310 A HOH 314 5 HOH HOH 314 A HOH 315 5 HOH HOH 315 A HOH 318 5 HOH HOH 318 A HOH 320 5 HOH HOH 320 A HOH 325 5 HOH HOH 325 A HOH 326 5 HOH HOH 326 A HOH 328 5 HOH HOH 328 A HOH 331 5 HOH HOH 331 A HOH 333 5 HOH HOH 333 A HOH 334 5 HOH HOH 334 A HOH 335 5 HOH HOH 335 A HOH 336 5 HOH HOH 336 A HOH 338 5 HOH HOH 338 A HOH 344 5 HOH HOH 344 A HOH 345 5 HOH HOH 345 A HOH 346 5 HOH HOH 346 A HOH 347 5 HOH HOH 347 A HOH 348 5 HOH HOH 348 A HOH 350 5 HOH HOH 350 A HOH 351 5 HOH HOH 351 A HOH 353 5 HOH HOH 353 A HOH 354 5 HOH HOH 354 A HOH 356 5 HOH HOH 356 A HOH 359 5 HOH HOH 359 A HOH 360 5 HOH HOH 360 A HOH 363 5 HOH HOH 363 A HOH 372 5 HOH HOH 372 A HOH 373 5 HOH HOH 373 A HOH 378 5 HOH HOH 378 A HOH 381 5 HOH HOH 381 A HOH 382 5 HOH HOH 382 A HOH 383 5 HOH HOH 383 A HOH 384 5 HOH HOH 384 A HOH 385 5 HOH HOH 385 A A 1 n 1 DA 1 B G 2 n 2 DG 2 B C 3 n 3 DC 3 B G 4 n 4 DG 4 B T 5 n 5 DT 5 B G 6 n 6 DG 6 B G 7 n 7 DG 7 B G 8 n 8 DG 8 B C 9 n 9 DC 9 B G 10 n 10 DG 10 B T 11 n 11 DT 11 B T 51 n 1 DT 51 C A 52 n 2 DA 52 C C 53 n 3 DC 53 C G 54 n 4 DG 54 C C 55 n 5 DC 55 C C 56 n 6 DC 56 C C 57 n 7 DC 57 C A 58 n 8 DA 58 C C 59 n 9 DC 59 C G 60 n 10 DG 60 C C 61 n 11 DC 61 C n 1 101 A n 2 102 A ARG 103 n 3 ARG 103 A PRO 104 n 4 PRO 104 A TYR 105 n 5 TYR 105 A ALA 106 n 6 ALA 106 A CYS 107 n 7 CYS 107 A PRO 108 n 8 PRO 108 A VAL 109 n 9 VAL 109 A GLU 110 n 10 GLU 110 A SER 111 n 11 SER 111 A CYS 112 n 12 CYS 112 A ASP 113 n 13 ASP 113 A ARG 114 n 14 ARG 114 A ARG 115 n 15 ARG 115 A PHE 116 n 16 PHE 116 A SER 117 n 17 SER 117 A ARG 118 n 18 ARG 118 A SER 119 n 19 SER 119 A ASP 120 n 20 ASP 120 A GLU 121 n 21 GLU 121 A LEU 122 n 22 LEU 122 A THR 123 n 23 THR 123 A ARG 124 n 24 ARG 124 A HIS 125 n 25 HIS 125 A ILE 126 n 26 ILE 126 A ARG 127 n 27 ARG 127 A ILE 128 n 28 ILE 128 A HIS 129 n 29 HIS 129 A THR 130 n 30 THR 130 A GLY 131 n 31 GLY 131 A GLN 132 n 32 GLN 132 A LYS 133 n 33 LYS 133 A PRO 134 n 34 PRO 134 A PHE 135 n 35 PHE 135 A GLN 136 n 36 GLN 136 A CYS 137 n 37 CYS 137 A ARG 138 n 38 ARG 138 A ILE 139 n 39 ILE 139 A CYS 140 n 40 CYS 140 A MET 141 n 41 MET 141 A ARG 142 n 42 ARG 142 A ASN 143 n 43 ASN 143 A PHE 144 n 44 PHE 144 A SER 145 n 45 SER 145 A ARG 146 n 46 ARG 146 A SER 147 n 47 SER 147 A ASP 148 n 48 ASP 148 A HIS 149 n 49 HIS 149 A LEU 150 n 50 LEU 150 A THR 151 n 51 THR 151 A THR 152 n 52 THR 152 A HIS 153 n 53 HIS 153 A ILE 154 n 54 ILE 154 A ARG 155 n 55 ARG 155 A THR 156 n 56 THR 156 A HIS 157 n 57 HIS 157 A THR 158 n 58 THR 158 A GLY 159 n 59 GLY 159 A GLU 160 n 60 GLU 160 A LYS 161 n 61 LYS 161 A PRO 162 n 62 PRO 162 A PHE 163 n 63 PHE 163 A ALA 164 n 64 ALA 164 A CYS 165 n 65 CYS 165 A ASP 166 n 66 ASP 166 A ILE 167 n 67 ILE 167 A CYS 168 n 68 CYS 168 A GLY 169 n 69 GLY 169 A ARG 170 n 70 ARG 170 A LYS 171 n 71 LYS 171 A PHE 172 n 72 PHE 172 A ALA 173 n 73 ALA 173 A ARG 174 n 74 ARG 174 A SER 175 n 75 SER 175 A ASP 176 n 76 ASP 176 A GLU 177 n 77 GLU 177 A ARG 178 n 78 ARG 178 A LYS 179 n 79 LYS 179 A ARG 180 n 80 ARG 180 A HIS 181 n 81 HIS 181 A THR 182 n 82 THR 182 A LYS 183 n 83 LYS 183 A ILE 184 n 84 ILE 184 A HIS 185 n 85 HIS 185 A LEU 186 n 86 LEU 186 A ARG 187 n 87 ARG 187 A n 88 188 A n 89 189 A n 90 190 A author_defined_assembly 3 trimeric A CYS 107 C SG CYS 7 1_555 A ZN 201 D ZN ZN 1_555 A CYS 112 C SG CYS 12 1_555 114.8 A CYS 107 C SG CYS 7 1_555 A ZN 201 D ZN ZN 1_555 A HIS 125 C NE2 HIS 25 1_555 106.9 A CYS 112 C SG CYS 12 1_555 A ZN 201 D ZN ZN 1_555 A HIS 125 C NE2 HIS 25 1_555 109.6 A CYS 107 C SG CYS 7 1_555 A ZN 201 D ZN ZN 1_555 A HIS 129 C NE2 HIS 29 1_555 107.9 A CYS 112 C SG CYS 12 1_555 A ZN 201 D ZN ZN 1_555 A HIS 129 C NE2 HIS 29 1_555 111.5 A HIS 125 C NE2 HIS 25 1_555 A ZN 201 D ZN ZN 1_555 A HIS 129 C NE2 HIS 29 1_555 105.7 A CYS 137 C SG CYS 37 1_555 A ZN 202 E ZN ZN 1_555 A CYS 140 C SG CYS 40 1_555 115.7 A CYS 137 C SG CYS 37 1_555 A ZN 202 E ZN ZN 1_555 A HIS 153 C NE2 HIS 53 1_555 108.5 A CYS 140 C SG CYS 40 1_555 A ZN 202 E ZN ZN 1_555 A HIS 153 C NE2 HIS 53 1_555 110.7 A CYS 137 C SG CYS 37 1_555 A ZN 202 E ZN ZN 1_555 A HIS 157 C NE2 HIS 57 1_555 111.0 A CYS 140 C SG CYS 40 1_555 A ZN 202 E ZN ZN 1_555 A HIS 157 C NE2 HIS 57 1_555 114.2 A HIS 153 C NE2 HIS 53 1_555 A ZN 202 E ZN ZN 1_555 A HIS 157 C NE2 HIS 57 1_555 94.8 A CYS 165 C SG CYS 65 1_555 A ZN 203 F ZN ZN 1_555 A CYS 168 C SG CYS 68 1_555 116.9 A CYS 165 C SG CYS 65 1_555 A ZN 203 F ZN ZN 1_555 A HIS 181 C NE2 HIS 81 1_555 103.3 A CYS 168 C SG CYS 68 1_555 A ZN 203 F ZN ZN 1_555 A HIS 181 C NE2 HIS 81 1_555 104.7 A CYS 165 C SG CYS 65 1_555 A ZN 203 F ZN ZN 1_555 A HIS 185 C NE2 HIS 85 1_555 103.9 A CYS 168 C SG CYS 68 1_555 A ZN 203 F ZN ZN 1_555 A HIS 185 C NE2 HIS 85 1_555 118.2 A HIS 181 C NE2 HIS 81 1_555 A ZN 203 F ZN ZN 1_555 A HIS 185 C NE2 HIS 85 1_555 108.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 105 C O TYR 5 A N PHE 116 C N PHE 16 A O PHE 135 C O PHE 35 A N PHE 144 C N PHE 44 A O PHE 163 C O PHE 63 A N PHE 172 C N PHE 72 1 A HOH 302 I HOH 1 A HOH 347 I HOH 1 A MET 101 C MET 1 1 Y 1 A GLU 102 C GLU 2 1 Y 1 A GLN 188 C GLN 88 1 Y 1 A LYS 189 C LYS 89 1 Y 1 A ASP 190 C ASP 90 1 Y 1 3.26 0.30 108.30 111.56 B B B O4' C1' N1 DC DC DC 3 3 3 N 1 -4.92 0.80 105.90 100.98 B B B O4' C1' C2' DT DT DT 5 5 5 N 1 2.75 0.30 108.30 111.05 B B B O4' C1' N1 DT DT DT 5 5 5 N 1 2.89 0.30 108.30 111.19 B B B O4' C1' N1 DC DC DC 9 9 9 N 1 2.12 0.30 108.30 110.42 B B B O4' C1' N1 DT DT DT 11 11 11 N 1 3.43 0.30 108.30 111.73 C C C O4' C1' N9 DA DA DA 52 52 52 N 1 -4.81 0.80 105.90 101.09 C C C O4' C1' C2' DG DG DG 54 54 54 N 1 2.05 0.30 108.30 110.35 C C C O4' C1' N1 DC DC DC 56 56 56 N 1 4.21 0.60 118.90 123.11 C C C N1 C2 O2 DC DC DC 56 56 56 N 1 3.94 0.30 108.30 112.24 C C C O4' C1' N1 DC DC DC 57 57 57 N 1 -7.60 1.00 110.10 102.50 C C C C1' O4' C4' DA DA DA 58 58 58 N 1 2.14 0.30 108.30 110.44 C C C O4' C1' N1 DC DC DC 59 59 59 N 1 B B C5 C7 DT DT 5 5 0.040 0.006 1.496 1.536 N 30.00 0.2420000 0.1950000 0.2030000 0.1950000 1.600 6.000 2312 19207 12.00 87.000 RANDOM 100000.000 0.0100 1 RESTRAINED INDIVIDUAL THROUGOUT 2.000 MOLECULAR REPLACEMENT PDB ENTRY 1ZAA, WITHOUT WATERS 1.600 6.000 148 1330 3 445 734 0.007 0.009 1.29 3.02 22.8 29.8 1.23 0.60 1.460 1.000 2.380 1.500 2.030 1.000 3.300 1.500 0.2860000 0.2660000 1.67 242 1674 8 12.60 70.10 1.600 20.000 1AAY 22749 -2.000 -2.000 0.0620000 0.0250000 1 34.500 6.500 96.600 0.5340000 1.600 1.660 2.000 0.2230000 4.000 92.80 model building X-PLOR refinement X-PLOR data reduction DENZO data scaling SCALEPACK phasing X-PLOR ZIF268 ZINC FINGER-DNA COMPLEX 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N A SER 119 C SER 19 HELX_P A THR 130 C THR 30 1 1 12 A SER 147 C SER 47 HELX_P A THR 158 C THR 58 1 2 12 A SER 175 C SER 75 HELX_P A HIS 185 C HIS 85 1 3 11 metalc 2.215 A CYS 107 C SG CYS 7 1_555 A ZN 201 D ZN ZN 1_555 metalc 2.377 A CYS 112 C SG CYS 12 1_555 A ZN 201 D ZN ZN 1_555 metalc 2.081 A HIS 125 C NE2 HIS 25 1_555 A ZN 201 D ZN ZN 1_555 metalc 1.940 A HIS 129 C NE2 HIS 29 1_555 A ZN 201 D ZN ZN 1_555 metalc 2.284 A CYS 137 C SG CYS 37 1_555 A ZN 202 E ZN ZN 1_555 metalc 2.249 A CYS 140 C SG CYS 40 1_555 A ZN 202 E ZN ZN 1_555 metalc 2.060 A HIS 153 C NE2 HIS 53 1_555 A ZN 202 E ZN ZN 1_555 metalc 2.068 A HIS 157 C NE2 HIS 57 1_555 A ZN 202 E ZN ZN 1_555 metalc 2.254 A CYS 165 C SG CYS 65 1_555 A ZN 203 F ZN ZN 1_555 metalc 2.154 A CYS 168 C SG CYS 68 1_555 A ZN 203 F ZN ZN 1_555 metalc 2.041 A HIS 181 C NE2 HIS 81 1_555 A ZN 203 F ZN ZN 1_555 metalc 2.078 A HIS 185 C NE2 HIS 85 1_555 A ZN 203 F ZN ZN 1_555 hydrog WATSON-CRICK B DG 2 A N1 DG 2 1_555 C DC 61 B N3 DC 11 1_555 hydrog WATSON-CRICK B DG 2 A N2 DG 2 1_555 C DC 61 B O2 DC 11 1_555 hydrog WATSON-CRICK B DG 2 A O6 DG 2 1_555 C DC 61 B N4 DC 11 1_555 hydrog WATSON-CRICK B DC 3 A N3 DC 3 1_555 C DG 60 B N1 DG 10 1_555 hydrog WATSON-CRICK B DC 3 A N4 DC 3 1_555 C DG 60 B O6 DG 10 1_555 hydrog WATSON-CRICK B DC 3 A O2 DC 3 1_555 C DG 60 B N2 DG 10 1_555 hydrog WATSON-CRICK B DG 4 A N1 DG 4 1_555 C DC 59 B N3 DC 9 1_555 hydrog WATSON-CRICK B DG 4 A N2 DG 4 1_555 C DC 59 B O2 DC 9 1_555 hydrog WATSON-CRICK B DG 4 A O6 DG 4 1_555 C DC 59 B N4 DC 9 1_555 hydrog WATSON-CRICK B DT 5 A N3 DT 5 1_555 C DA 58 B N1 DA 8 1_555 hydrog WATSON-CRICK B DT 5 A O4 DT 5 1_555 C DA 58 B N6 DA 8 1_555 hydrog WATSON-CRICK B DG 6 A N1 DG 6 1_555 C DC 57 B N3 DC 7 1_555 hydrog WATSON-CRICK B DG 6 A N2 DG 6 1_555 C DC 57 B O2 DC 7 1_555 hydrog WATSON-CRICK B DG 6 A O6 DG 6 1_555 C DC 57 B N4 DC 7 1_555 hydrog WATSON-CRICK B DG 7 A N1 DG 7 1_555 C DC 56 B N3 DC 6 1_555 hydrog WATSON-CRICK B DG 7 A N2 DG 7 1_555 C DC 56 B O2 DC 6 1_555 hydrog WATSON-CRICK B DG 7 A O6 DG 7 1_555 C DC 56 B N4 DC 6 1_555 hydrog WATSON-CRICK B DG 8 A N1 DG 8 1_555 C DC 55 B N3 DC 5 1_555 hydrog WATSON-CRICK B DG 8 A N2 DG 8 1_555 C DC 55 B O2 DC 5 1_555 hydrog WATSON-CRICK B DG 8 A O6 DG 8 1_555 C DC 55 B N4 DC 5 1_555 hydrog WATSON-CRICK B DC 9 A N3 DC 9 1_555 C DG 54 B N1 DG 4 1_555 hydrog WATSON-CRICK B DC 9 A N4 DC 9 1_555 C DG 54 B O6 DG 4 1_555 hydrog WATSON-CRICK B DC 9 A O2 DC 9 1_555 C DG 54 B N2 DG 4 1_555 hydrog WATSON-CRICK B DG 10 A N1 DG 10 1_555 C DC 53 B N3 DC 3 1_555 hydrog WATSON-CRICK B DG 10 A N2 DG 10 1_555 C DC 53 B O2 DC 3 1_555 hydrog WATSON-CRICK B DG 10 A O6 DG 10 1_555 C DC 53 B N4 DC 3 1_555 hydrog WATSON-CRICK B DT 11 A N3 DT 11 1_555 C DA 52 B N1 DA 2 1_555 hydrog WATSON-CRICK B DT 11 A O4 DT 11 1_555 C DA 52 B N6 DA 2 1_555 TRANSCRIPTION/DNA ZINC FINGER, DNA-BINDING PROTEIN, COMPLEX (ZINC FINGER-DNA), TRANSCRIPTION-DNA COMPLEX EGR1_MOUSE UNP 3 P08046 1AAY PDB 1 1AAY 1AAY PDB 2 1AAY 308 396 1AAY 102 190 P08046 A 1 2 90 1 11 1AAY 1 11 1AAY B 2 1 11 51 61 1AAY 51 61 1AAY C 3 1 11 2 2 2 anti-parallel anti-parallel anti-parallel A TYR 105 C TYR 5 A ALA 106 C ALA 6 A ARG 115 C ARG 15 A PHE 116 C PHE 16 A PHE 135 C PHE 35 A GLN 136 C GLN 36 A ASN 143 C ASN 43 A PHE 144 C PHE 44 A PHE 163 C PHE 63 A ALA 164 C ALA 64 A LYS 171 C LYS 71 A PHE 172 C PHE 72 BINDING SITE FOR RESIDUE ZN A 201 A ZN 201 Software 4 BINDING SITE FOR RESIDUE ZN A 202 A ZN 202 Software 4 BINDING SITE FOR RESIDUE ZN A 203 A ZN 203 Software 4 A CYS 107 C CYS 7 4 1_555 A CYS 112 C CYS 12 4 1_555 A HIS 125 C HIS 25 4 1_555 A HIS 129 C HIS 29 4 1_555 A CYS 137 C CYS 37 4 1_555 A CYS 140 C CYS 40 4 1_555 A HIS 153 C HIS 53 4 1_555 A HIS 157 C HIS 57 4 1_555 A CYS 165 C CYS 65 4 1_555 A CYS 168 C CYS 68 4 1_555 A HIS 181 C HIS 81 4 1_555 A HIS 185 C HIS 85 4 1_555 20 C 2 2 21