0.024534
0.000000
0.000300
0.000000
0.054336
0.000000
0.000000
0.000000
0.044901
0.00000
0.00000
0.00000
Teeter, M.M.
Yamano, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
90.70
90.00
40.759
18.404
22.273
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O
46.068
ETHANOL
non-polymer
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
272
9597
9600
10.1074/jbc.272.15.9597
9092482
Crystal structure of Ser-22/Ile-25 form crambin confirms solvent, side chain substate correlations.
1997
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
150
1
COLLIMATOR
IMAGE PLATE
1992-10
RIGAKU
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
4728.410
CRAMBIN (SER22/ILE25)
1
nat
polymer
46.068
ETHANOL
1
syn
non-polymer
no
no
TTCCPSIVARSNFNVCRLPGTSEAICATYTGCIIIPGATCPGDYAN
TTCCPSIVARSNFNVCRLPGTSEAICATYTGCIIIPGATCPGDYAN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Crambe
sample
3721
Crambe hispanica subsp. abyssinica
Crambe hispanica
subsp. abyssinica
1
1.77
30.37
vapor diffusion - hanging drop - microseeding
7.
HPLC PURIFIED SI-CRAMBIN PROTEIN WAS DISSOLVED AT 25 MG/ML IN 80% ETHANOL/WATER (V/V), AND EQUILIBRATED AGAINS 60% ETHANOL. AFTER 10 DAYS, THE RESERVOIR WAS LOWERED TO 50% AND MICROSEEDED BY THE STREAK SEEDING METHOD (CAT WHISKER). AFTER LOWERING THE RESERVOIR TO 45%, GOOD CRYSTALS WERE FORMED., pH 7., vapor diffusion - hanging drop - microseeding
repository
Initial release
Version format compliance
Version format compliance
Other
1
0
1997-08-12
1
1
2008-03-04
1
2
2011-07-13
1
3
2016-10-19
Y
1997-01-31
REL
REL
EOH
ETHANOL
EOH
66
2
EOH
EOH
66
A
THR
1
n
1
THR
1
A
THR
2
n
2
THR
2
A
CYS
3
n
3
CYS
3
A
CYS
4
n
4
CYS
4
A
PRO
5
n
5
PRO
5
A
SER
6
n
6
SER
6
A
ILE
7
n
7
ILE
7
A
VAL
8
n
8
VAL
8
A
ALA
9
n
9
ALA
9
A
ARG
10
n
10
ARG
10
A
SER
11
n
11
SER
11
A
ASN
12
n
12
ASN
12
A
PHE
13
n
13
PHE
13
A
ASN
14
n
14
ASN
14
A
VAL
15
n
15
VAL
15
A
CYS
16
n
16
CYS
16
A
ARG
17
n
17
ARG
17
A
LEU
18
n
18
LEU
18
A
PRO
19
n
19
PRO
19
A
GLY
20
n
20
GLY
20
A
THR
21
n
21
THR
21
A
SER
22
n
22
SER
22
A
GLU
23
n
23
GLU
23
A
ALA
24
n
24
ALA
24
A
ILE
25
n
25
ILE
25
A
CYS
26
n
26
CYS
26
A
ALA
27
n
27
ALA
27
A
THR
28
n
28
THR
28
A
TYR
29
n
29
TYR
29
A
THR
30
n
30
THR
30
A
GLY
31
n
31
GLY
31
A
CYS
32
n
32
CYS
32
A
ILE
33
n
33
ILE
33
A
ILE
34
n
34
ILE
34
A
ILE
35
n
35
ILE
35
A
PRO
36
n
36
PRO
36
A
GLY
37
n
37
GLY
37
A
ALA
38
n
38
ALA
38
A
THR
39
n
39
THR
39
A
CYS
40
n
40
CYS
40
A
PRO
41
n
41
PRO
41
A
GLY
42
n
42
GLY
42
A
ASP
43
n
43
ASP
43
A
TYR
44
n
44
TYR
44
A
ALA
45
n
45
ALA
45
A
ASN
46
n
46
ASN
46
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
CYS
3
A
O
CYS
3
A
N
ILE
33
A
N
ILE
33
1
16.92
2.50
121.70
138.62
A
A
A
C
N
CA
THR
THR
THR
1
2
2
B
Y
1
15.76
1.90
110.30
126.06
A
A
A
N
CA
CB
THR
THR
THR
2
2
2
B
B
N
1
-16.67
1.90
111.00
94.33
A
A
A
CA
CB
CG1
ILE
ILE
ILE
7
7
7
B
B
N
1
-12.29
1.90
111.00
98.71
A
A
A
CA
CB
CG1
ILE
ILE
ILE
34
34
34
B
N
1
A
A
CA
C
VAL
VAL
8
8
0.220
0.026
1.525
1.745
B
N
1
A
A
CG
CD
ARG
ARG
10
10
0.187
0.025
1.515
1.702
B
N
1
A
A
CD
OE2
GLU
GLU
23
23
0.075
0.011
1.252
1.327
N
1
A
A
CB
CG1
ILE
ILE
34
34
0.408
0.028
1.536
1.944
B
N
5.5
OVERALL WEIGHT WAS 1/(SIGDEL) AND SIGDEL=8-10(SINTH/L-0.166667)
THIS STRUCTURE ILLUSTRATES THE CONFIRMATION OF THE ABILITY
OF X-RAY DIFFRACTION TO DETECT SUBSTATES. HERE THE
SUBSTATES WERE PHYSICALLY SEPARATED (TWO SEQUENCE FORMS OF
CRAMBIN) AND SEPARATE STRUCTURES DETERMINED. FURTHER
SUBSTATES ARE EXTENDED FROM PROTEIN TO SURROUNDING SOLVENT.
0.147
0.89
10.
19803
84.6
1
DIFFERENCE DENSITY PEAKS
2.0
ALREADY SOLVED
0.08
17.6
0.89
10.
0
329
3
0
326
0.014
0.02
0.033
0.04
0.058
0.050
0.010
0.006
0.11
1.0
0.11
1.5
0.136
1.0
0.136
1.5
0.010
0.01
0.063
0.050
0.158
0.50
0.160
0.5
0.00
0.5
0.158
0.5
5.1
3.0
10.2
15.0
25.6
20.0
0.0
15.
0.89
17.67
1AB1
23165
0.
0.04
0.1
1
8.3
1.0
88.77
0.1
0.890
0.897
3.2
0.15
1
0.1
74.96
data collection
LEHMANN-LARSEN
data reduction
TEXSAN
refinement
PROLSQ
data reduction
LEHMANN-LARSEN
data scaling
TEXSAN
CRAMBIN (SER22/ILE25)
SI FORM CRAMBIN
1
N
N
2
N
N
A
ASN
12
A
ASN
12
HELX_P
A
LEU
18
A
LEU
18
1
1
7
A
ALA
27
A
ALA
27
HELX_P
A
THR
30
A
THR
30
1
2
4
disulf
2.028
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
40
A
SG
CYS
40
1_555
disulf
2.043
A
CYS
4
A
SG
CYS
4
1_555
A
CYS
32
A
SG
CYS
32
1_555
disulf
2.033
A
CYS
16
A
SG
CYS
16
1_555
A
CYS
26
A
SG
CYS
26
1_555
PLANT SEED PROTEIN
THIONIN, PLANT SEED PROTEIN
CRAM_CRAAB
UNP
1
1
P01542
TTCCPSIVARSNFNVCRLPGTPEALCATYTGCIIIPGATCPGDYAN
1
46
1AB1
1
46
P01542
A
1
1
46
1
PRO
CONFLICT
SER
22
1AB1
A
P01542
UNP
22
22
1
LEU
CONFLICT
ILE
25
1AB1
A
P01542
UNP
25
25
2
anti-parallel
A
THR
2
A
THR
2
A
CYS
3
A
CYS
3
A
ILE
33
A
ILE
33
A
ILE
34
A
ILE
34
BINDING SITE FOR RESIDUE EOH A 66
Software
2
A
ILE
7
A
ILE
7
2
1_555
A
ASN
46
A
ASN
46
2
1_555
4
P 1 21 1