1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Wilkens, S.
Dunn, S.D.
Chandler, J.
Dahlquist, F.W.
Capaldi, R.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
4
198
201
10.1038/nsb0397-198
9164460
Solution structure of the N-terminal domain of the delta subunit of the E. coli ATPsynthase.
1997
10.2210/pdb1abv/pdb
pdb_00001abv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
14676.533
DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE
3.6.1.34
N-TERMINAL DOMAIN, RESIDUES 1 - 134
1
man
polymer
no
no
SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMA
ENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSR
SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMA
ENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
UNCH
562
Escherichia coli
MM294 AND 594
PLASMID
PJC1
database_2
pdbx_database_status
pdbx_nmr_representative
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1997-07-07
1
1
2008-03-24
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_nmr_software.authors
_pdbx_nmr_software.classification
_pdbx_nmr_software.version
_pdbx_nmr_spectrometer.manufacturer
_pdbx_nmr_spectrometer.model
Y
BNL
1997-01-29
REL
ALL
30
1
3D NOESY-HSMQC
3D TOCSY-HSMQC
3D C(CO)NH
3D H(CCO)NH
SIMULTANEOUS 13C/15N RESOLVED NOESY
VARIOUS 2D EXPERIMENTS
7.2
293
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. THIS ENTRY CONTAINS THE MINIMIZED AVERAGE OVER 30 FILES. THE AVERAGE RMS DIFFERENCE TO THE MEAN STRUCTURE FOR NON-HYDROGEN ATOMS IS 1.25067. THE AVERAGE RMS DIFFERENCE TO THE MEAN STRUCTURE FOR THE BACKBONE IS 0.795004. THE B VALUE FIELD (COLUMNS 61 =66) CONTAINS THE RMS DIFFERENCE FROM THE MEAN.
DG, SA, MD
1
BRUNGER
refinement
X-PLOR
3.1
BRUNGER
structure calculation
X-PLOR
3.1
500
GE
GN
500
Varian
UNITY
SER
1
n
1
SER
1
A
GLU
2
n
2
GLU
2
A
PHE
3
n
3
PHE
3
A
ILE
4
n
4
ILE
4
A
THR
5
n
5
THR
5
A
VAL
6
n
6
VAL
6
A
ALA
7
n
7
ALA
7
A
ARG
8
n
8
ARG
8
A
PRO
9
n
9
PRO
9
A
TYR
10
n
10
TYR
10
A
ALA
11
n
11
ALA
11
A
LYS
12
n
12
LYS
12
A
ALA
13
n
13
ALA
13
A
ALA
14
n
14
ALA
14
A
PHE
15
n
15
PHE
15
A
ASP
16
n
16
ASP
16
A
PHE
17
n
17
PHE
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
GLU
20
n
20
GLU
20
A
HIS
21
n
21
HIS
21
A
GLN
22
n
22
GLN
22
A
SER
23
n
23
SER
23
A
VAL
24
n
24
VAL
24
A
GLU
25
n
25
GLU
25
A
ARG
26
n
26
ARG
26
A
TRP
27
n
27
TRP
27
A
GLN
28
n
28
GLN
28
A
ASP
29
n
29
ASP
29
A
MET
30
n
30
MET
30
A
LEU
31
n
31
LEU
31
A
ALA
32
n
32
ALA
32
A
PHE
33
n
33
PHE
33
A
ALA
34
n
34
ALA
34
A
ALA
35
n
35
ALA
35
A
GLU
36
n
36
GLU
36
A
VAL
37
n
37
VAL
37
A
THR
38
n
38
THR
38
A
LYS
39
n
39
LYS
39
A
ASN
40
n
40
ASN
40
A
GLU
41
n
41
GLU
41
A
GLN
42
n
42
GLN
42
A
MET
43
n
43
MET
43
A
ALA
44
n
44
ALA
44
A
GLU
45
n
45
GLU
45
A
LEU
46
n
46
LEU
46
A
LEU
47
n
47
LEU
47
A
SER
48
n
48
SER
48
A
GLY
49
n
49
GLY
49
A
ALA
50
n
50
ALA
50
A
LEU
51
n
51
LEU
51
A
ALA
52
n
52
ALA
52
A
PRO
53
n
53
PRO
53
A
GLU
54
n
54
GLU
54
A
THR
55
n
55
THR
55
A
LEU
56
n
56
LEU
56
A
ALA
57
n
57
ALA
57
A
GLU
58
n
58
GLU
58
A
SER
59
n
59
SER
59
A
PHE
60
n
60
PHE
60
A
ILE
61
n
61
ILE
61
A
ALA
62
n
62
ALA
62
A
VAL
63
n
63
VAL
63
A
CYS
64
n
64
CYS
64
A
GLY
65
n
65
GLY
65
A
GLU
66
n
66
GLU
66
A
GLN
67
n
67
GLN
67
A
LEU
68
n
68
LEU
68
A
ASP
69
n
69
ASP
69
A
GLU
70
n
70
GLU
70
A
ASN
71
n
71
ASN
71
A
GLY
72
n
72
GLY
72
A
GLN
73
n
73
GLN
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
ILE
76
n
76
ILE
76
A
ARG
77
n
77
ARG
77
A
VAL
78
n
78
VAL
78
A
MET
79
n
79
MET
79
A
ALA
80
n
80
ALA
80
A
GLU
81
n
81
GLU
81
A
ASN
82
n
82
ASN
82
A
GLY
83
n
83
GLY
83
A
ARG
84
n
84
ARG
84
A
LEU
85
n
85
LEU
85
A
ASN
86
n
86
ASN
86
A
ALA
87
n
87
ALA
87
A
LEU
88
n
88
LEU
88
A
PRO
89
n
89
PRO
89
A
ASP
90
n
90
ASP
90
A
VAL
91
n
91
VAL
91
A
LEU
92
n
92
LEU
92
A
GLU
93
n
93
GLU
93
A
GLN
94
n
94
GLN
94
A
PHE
95
n
95
PHE
95
A
ILE
96
n
96
ILE
96
A
HIS
97
n
97
HIS
97
A
LEU
98
n
98
LEU
98
A
ARG
99
n
99
ARG
99
A
ALA
100
n
100
ALA
100
A
VAL
101
n
101
VAL
101
A
SER
102
n
102
SER
102
A
GLU
103
n
103
GLU
103
A
ALA
104
n
104
ALA
104
A
THR
105
n
105
THR
105
A
n
106
106
A
n
107
107
A
n
108
108
A
n
109
109
A
n
110
110
A
n
111
111
A
n
112
112
A
n
113
113
A
n
114
114
A
n
115
115
A
n
116
116
A
n
117
117
A
n
118
118
A
n
119
119
A
n
120
120
A
n
121
121
A
n
122
122
A
n
123
123
A
n
124
124
A
n
125
125
A
n
126
126
A
n
127
127
A
n
128
128
A
n
129
129
A
n
130
130
A
n
131
131
A
n
132
132
A
n
133
133
A
n
134
134
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ALA
106
A
ALA
106
1
Y
1
A
GLU
107
A
GLU
107
1
Y
1
A
VAL
108
A
VAL
108
1
Y
1
A
ASP
109
A
ASP
109
1
Y
1
A
VAL
110
A
VAL
110
1
Y
1
A
ILE
111
A
ILE
111
1
Y
1
A
SER
112
A
SER
112
1
Y
1
A
ALA
113
A
ALA
113
1
Y
1
A
ALA
114
A
ALA
114
1
Y
1
A
ALA
115
A
ALA
115
1
Y
1
A
LEU
116
A
LEU
116
1
Y
1
A
SER
117
A
SER
117
1
Y
1
A
GLU
118
A
GLU
118
1
Y
1
A
GLN
119
A
GLN
119
1
Y
1
A
GLN
120
A
GLN
120
1
Y
1
A
LEU
121
A
LEU
121
1
Y
1
A
ALA
122
A
ALA
122
1
Y
1
A
LYS
123
A
LYS
123
1
Y
1
A
ILE
124
A
ILE
124
1
Y
1
A
SER
125
A
SER
125
1
Y
1
A
ALA
126
A
ALA
126
1
Y
1
A
ALA
127
A
ALA
127
1
Y
1
A
MET
128
A
MET
128
1
Y
1
A
GLU
129
A
GLU
129
1
Y
1
A
LYS
130
A
LYS
130
1
Y
1
A
ARG
131
A
ARG
131
1
Y
1
A
LEU
132
A
LEU
132
1
Y
1
A
SER
133
A
SER
133
1
Y
1
A
ARG
134
A
ARG
134
1
Y
1
A
A
OE2
HZ2
GLU
LYS
36
39
1.40
1
A
A
O
H
SER
TRP
23
27
1.49
1
A
A
HZ1
OD1
LYS
ASP
12
16
1.55
1
A
A
O
H
ARG
GLU
77
81
1.58
1
A
A
O
H
VAL
THR
101
105
1.60
1
A
ARG
8
0.303
SIDE CHAIN
1
A
ARG
26
0.282
SIDE CHAIN
1
A
ARG
77
0.319
SIDE CHAIN
1
A
ARG
84
0.309
SIDE CHAIN
1
A
ARG
99
0.238
SIDE CHAIN
1
A
ALA
87
-81.00
37.02
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
N-TERMINAL DOMAIN OF THE DELTA SUBUNIT OF THE F1F0-ATP SYNTHASE FROM ESCHERICHIA COLI, NMR, MINIMIZED AVERAGE STRUCTURE
1
Y
N
A
ILE
4
A
ILE
4
HELX_P
A
GLU
20
A
GLU
20
1
1
17
A
VAL
24
A
VAL
24
HELX_P
A
THR
38
A
THR
38
1
2
15
A
GLU
41
A
GLU
41
HELX_P
A
LEU
47
A
LEU
47
1
3
7
A
PRO
53
A
PRO
53
HELX_P
A
CYS
64
A
CYS
64
1
4
12
A
GLU
70
A
GLU
70
HELX_P
A
GLU
81
A
GLU
81
1
5
12
A
LEU
88
A
LEU
88
HELX_P
A
GLU
103
A
GLU
103
1
6
16
ATP SYNTHESIS
ATP SYNTHESIS, ATP SYNTHASE, F1-ATPASE, DELTA SUBUNIT, NMR SPECTROSCOPY
ATPD_ECOLI
UNP
1
1
P0ABA4
MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVM
AENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
DGSVRGRLERLADVLQS
2
135
1ABV
1
134
P0ABA4
A
1
1
134
1
P 1