0.013141
0.000000
0.000000
0.000000
0.016287
0.000000
0.000000
0.000000
0.021692
0.00000
0.00000
0.00000
Unge, J.
Al-Karadaghi, S.
Liljas, A.
Jonsson, B.-H.
Eliseikina, I.
Ossina, N.
Nevskaya, N.
Fomenkova, N.
Garber, M.
Nikonov, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
76.100
61.400
46.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
Hg 2
200.590
MERCURY (II) ION
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
HG
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
R
C
N
257
N
O
N
258
N
C
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
S
N
328
N
O
N
329
N
O
N
330
N
O
N
331
N
O
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
R
C
N
337
N
O
N
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
N
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
N
387
N
O
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
N
405
N
C
N
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
Y
269
N
doub
Y
270
N
sing
Y
271
N
sing
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
Y
370
N
doub
Y
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
NE
FEBS Lett.
FEBLAL
0165
0014-5793
411
53
59
10.1016/S0014-5793(97)00611-X
9247141
A mutant form of the ribosomal protein L1 reveals conformational flexibility.
1997
10.2210/pdb1ad2/pdb
pdb_00001ad2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
COLLIMATOR 0.3X0.3
IMAGE PLATE
1995-11
MARRESEARCH
M
x-ray
1
0.87
1.0
BW7B
EMBL/DESY, HAMBURG
0.87
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7B
24752.566
RIBOSOMAL PROTEIN L1
S179C
1
man
polymer
96.063
SULFATE ION
3
syn
non-polymer
200.590
MERCURY (II) ION
1
syn
non-polymer
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
1
syn
non-polymer
18.015
water
122
nat
water
TL2
no
no
PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKG
EKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGR
IEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKG
EKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGR
IEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
VK-1
Escherichia
Escherichia coli
sample
274
RIBOSOME
Thermus thermophilus
511693
Escherichia coli BL21
BL21
PACA-L1
1
2.17
43.43
DROPS CONTAINING: APPR. 15 MG/ML L1 50 MM GLYCINE, INITIALLY AT PH 10 5% (V/V) METHANE PENTANEDIOL 1.2 M AMMONIUM SULFATE EQUILIBRATED AGAINST 2.4 M AMMONIUM SULFATE 7% (V/V) METHANE PENTANEDIOL
database_2
diffrn_source
pdbx_database_status
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
Data collection
1
0
1997-05-15
1
1
2008-03-24
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_pdbx_database_status.process_site
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-02-20
REL
REL
SO4
SULFATE ION
HG
MERCURY (II) ION
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL
HOH
water
SO4
800
2
SO4
SO4
800
A
SO4
801
2
SO4
SO4
801
A
SO4
803
2
SO4
SO4
803
A
HG
900
3
HG
HG
900
A
MPD
700
4
MRD
MRD
700
A
HOH
304
5
HOH
HOH
304
A
HOH
305
5
HOH
HOH
305
A
HOH
309
5
HOH
HOH
309
A
HOH
310
5
HOH
HOH
310
A
HOH
317
5
HOH
HOH
317
A
HOH
324
5
HOH
HOH
324
A
HOH
326
5
HOH
HOH
326
A
HOH
327
5
HOH
HOH
327
A
HOH
329
5
HOH
HOH
329
A
HOH
331
5
HOH
HOH
331
A
HOH
333
5
HOH
HOH
333
A
HOH
336
5
HOH
HOH
336
A
HOH
338
5
HOH
HOH
338
A
HOH
340
5
HOH
HOH
340
A
HOH
341
5
HOH
HOH
341
A
HOH
343
5
HOH
HOH
343
A
HOH
345
5
HOH
HOH
345
A
HOH
346
5
HOH
HOH
346
A
HOH
348
5
HOH
HOH
348
A
HOH
351
5
HOH
HOH
351
A
HOH
357
5
HOH
HOH
357
A
HOH
361
5
HOH
HOH
361
A
HOH
364
5
HOH
HOH
364
A
HOH
367
5
HOH
HOH
367
A
HOH
368
5
HOH
HOH
368
A
HOH
369
5
HOH
HOH
369
A
HOH
370
5
HOH
HOH
370
A
HOH
375
5
HOH
HOH
375
A
HOH
380
5
HOH
HOH
380
A
HOH
381
5
HOH
HOH
381
A
HOH
383
5
HOH
HOH
383
A
HOH
385
5
HOH
HOH
385
A
HOH
386
5
HOH
HOH
386
A
HOH
392
5
HOH
HOH
392
A
HOH
394
5
HOH
HOH
394
A
HOH
396
5
HOH
HOH
396
A
HOH
397
5
HOH
HOH
397
A
HOH
398
5
HOH
HOH
398
A
HOH
402
5
HOH
HOH
402
A
HOH
403
5
HOH
HOH
403
A
HOH
404
5
HOH
HOH
404
A
HOH
405
5
HOH
HOH
405
A
HOH
408
5
HOH
HOH
408
A
HOH
410
5
HOH
HOH
410
A
HOH
411
5
HOH
HOH
411
A
HOH
412
5
HOH
HOH
412
A
HOH
413
5
HOH
HOH
413
A
HOH
415
5
HOH
HOH
415
A
HOH
416
5
HOH
HOH
416
A
HOH
417
5
HOH
HOH
417
A
HOH
419
5
HOH
HOH
419
A
HOH
420
5
HOH
HOH
420
A
HOH
422
5
HOH
HOH
422
A
HOH
423
5
HOH
HOH
423
A
HOH
424
5
HOH
HOH
424
A
HOH
427
5
HOH
HOH
427
A
HOH
430
5
HOH
HOH
430
A
HOH
451
5
HOH
HOH
451
A
HOH
453
5
HOH
HOH
453
A
HOH
454
5
HOH
HOH
454
A
HOH
502
5
HOH
HOH
502
A
HOH
510
5
HOH
HOH
510
A
HOH
523
5
HOH
HOH
523
A
HOH
524
5
HOH
HOH
524
A
HOH
534
5
HOH
HOH
534
A
HOH
542
5
HOH
HOH
542
A
HOH
546
5
HOH
HOH
546
A
HOH
551
5
HOH
HOH
551
A
HOH
552
5
HOH
HOH
552
A
HOH
556
5
HOH
HOH
556
A
HOH
562
5
HOH
HOH
562
A
HOH
564
5
HOH
HOH
564
A
HOH
567
5
HOH
HOH
567
A
HOH
573
5
HOH
HOH
573
A
HOH
583
5
HOH
HOH
583
A
HOH
587
5
HOH
HOH
587
A
HOH
593
5
HOH
HOH
593
A
HOH
594
5
HOH
HOH
594
A
HOH
596
5
HOH
HOH
596
A
HOH
597
5
HOH
HOH
597
A
HOH
600
5
HOH
HOH
600
A
HOH
602
5
HOH
HOH
602
A
HOH
606
5
HOH
HOH
606
A
HOH
609
5
HOH
HOH
609
A
HOH
611
5
HOH
HOH
611
A
HOH
613
5
HOH
HOH
613
A
HOH
616
5
HOH
HOH
616
A
HOH
622
5
HOH
HOH
622
A
HOH
625
5
HOH
HOH
625
A
HOH
627
5
HOH
HOH
627
A
HOH
628
5
HOH
HOH
628
A
HOH
629
5
HOH
HOH
629
A
HOH
633
5
HOH
HOH
633
A
HOH
635
5
HOH
HOH
635
A
HOH
636
5
HOH
HOH
636
A
HOH
637
5
HOH
HOH
637
A
HOH
639
5
HOH
HOH
639
A
HOH
640
5
HOH
HOH
640
A
HOH
641
5
HOH
HOH
641
A
HOH
643
5
HOH
HOH
643
A
HOH
644
5
HOH
HOH
644
A
HOH
650
5
HOH
HOH
650
A
HOH
670
5
HOH
HOH
670
A
HOH
671
5
HOH
HOH
671
A
HOH
673
5
HOH
HOH
673
A
HOH
674
5
HOH
HOH
674
A
HOH
675
5
HOH
HOH
675
A
HOH
676
5
HOH
HOH
676
A
HOH
677
5
HOH
HOH
677
A
HOH
678
5
HOH
HOH
678
A
HOH
679
5
HOH
HOH
679
A
HOH
681
5
HOH
HOH
681
A
HOH
682
5
HOH
HOH
682
A
HOH
683
5
HOH
HOH
683
A
HOH
684
5
HOH
HOH
684
A
HOH
685
5
HOH
HOH
685
A
HOH
686
5
HOH
HOH
686
A
HOH
689
5
HOH
HOH
689
A
HOH
691
5
HOH
HOH
691
A
HOH
693
5
HOH
HOH
693
A
HOH
694
5
HOH
HOH
694
A
HOH
695
5
HOH
HOH
695
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
LYS
5
n
5
LYS
5
A
ARG
6
n
6
ARG
6
A
TYR
7
n
7
TYR
7
A
ARG
8
n
8
ARG
8
A
ALA
9
n
9
ALA
9
A
LEU
10
n
10
LEU
10
A
LEU
11
n
11
LEU
11
A
GLU
12
n
12
GLU
12
A
LYS
13
n
13
LYS
13
A
VAL
14
n
14
VAL
14
A
ASP
15
n
15
ASP
15
A
PRO
16
n
16
PRO
16
A
ASN
17
n
17
ASN
17
A
LYS
18
n
18
LYS
18
A
ILE
19
n
19
ILE
19
A
TYR
20
n
20
TYR
20
A
THR
21
n
21
THR
21
A
ILE
22
n
22
ILE
22
A
ASP
23
n
23
ASP
23
A
GLU
24
n
24
GLU
24
A
ALA
25
n
25
ALA
25
A
ALA
26
n
26
ALA
26
A
HIS
27
n
27
HIS
27
A
LEU
28
n
28
LEU
28
A
VAL
29
n
29
VAL
29
A
LYS
30
n
30
LYS
30
A
GLU
31
n
31
GLU
31
A
LEU
32
n
32
LEU
32
A
ALA
33
n
33
ALA
33
A
THR
34
n
34
THR
34
A
ALA
35
n
35
ALA
35
A
LYS
36
n
36
LYS
36
A
PHE
37
n
37
PHE
37
A
ASP
38
n
38
ASP
38
A
GLU
39
n
39
GLU
39
A
THR
40
n
40
THR
40
A
VAL
41
n
41
VAL
41
A
GLU
42
n
42
GLU
42
A
VAL
43
n
43
VAL
43
A
HIS
44
n
44
HIS
44
A
ALA
45
n
45
ALA
45
A
LYS
46
n
46
LYS
46
A
LEU
47
n
47
LEU
47
A
GLY
48
n
48
GLY
48
A
ILE
49
n
49
ILE
49
A
ASP
50
n
50
ASP
50
A
PRO
51
n
51
PRO
51
A
ARG
52
n
52
ARG
52
A
ARG
53
n
53
ARG
53
A
SER
54
n
54
SER
54
A
ASP
55
n
55
ASP
55
A
GLN
56
n
56
GLN
56
A
ASN
57
n
57
ASN
57
A
VAL
58
n
58
VAL
58
A
ARG
59
n
59
ARG
59
A
GLY
60
n
60
GLY
60
A
THR
61
n
61
THR
61
A
VAL
62
n
62
VAL
62
A
SER
63
n
63
SER
63
A
LEU
64
n
64
LEU
64
A
PRO
65
n
65
PRO
65
A
HIS
66
n
66
HIS
66
A
GLY
67
n
67
GLY
67
A
LEU
68
n
68
LEU
68
A
GLY
69
n
69
GLY
69
A
LYS
70
n
70
LYS
70
A
GLN
71
n
71
GLN
71
A
VAL
72
n
72
VAL
72
A
ARG
73
n
73
ARG
73
A
VAL
74
n
74
VAL
74
A
LEU
75
n
75
LEU
75
A
ALA
76
n
76
ALA
76
A
ILE
77
n
77
ILE
77
A
ALA
78
n
78
ALA
78
A
LYS
79
n
79
LYS
79
A
GLY
80
n
80
GLY
80
A
GLU
81
n
81
GLU
81
A
LYS
82
n
82
LYS
82
A
ILE
83
n
83
ILE
83
A
LYS
84
n
84
LYS
84
A
GLU
85
n
85
GLU
85
A
ALA
86
n
86
ALA
86
A
GLU
87
n
87
GLU
87
A
GLU
88
n
88
GLU
88
A
ALA
89
n
89
ALA
89
A
GLY
90
n
90
GLY
90
A
ALA
91
n
91
ALA
91
A
ASP
92
n
92
ASP
92
A
TYR
93
n
93
TYR
93
A
VAL
94
n
94
VAL
94
A
GLY
95
n
95
GLY
95
A
GLY
96
n
96
GLY
96
A
GLU
97
n
97
GLU
97
A
GLU
98
n
98
GLU
98
A
ILE
99
n
99
ILE
99
A
ILE
100
n
100
ILE
100
A
GLN
101
n
101
GLN
101
A
LYS
102
n
102
LYS
102
A
ILE
103
n
103
ILE
103
A
LEU
104
n
104
LEU
104
A
ASP
105
n
105
ASP
105
A
GLY
106
n
106
GLY
106
A
TRP
107
n
107
TRP
107
A
MET
108
n
108
MET
108
A
ASP
109
n
109
ASP
109
A
PHE
110
n
110
PHE
110
A
ASP
111
n
111
ASP
111
A
ALA
112
n
112
ALA
112
A
VAL
113
n
113
VAL
113
A
VAL
114
n
114
VAL
114
A
ALA
115
n
115
ALA
115
A
THR
116
n
116
THR
116
A
PRO
117
n
117
PRO
117
A
ASP
118
n
118
ASP
118
A
VAL
119
n
119
VAL
119
A
MET
120
n
120
MET
120
A
GLY
121
n
121
GLY
121
A
ALA
122
n
122
ALA
122
A
VAL
123
n
123
VAL
123
A
GLY
124
n
124
GLY
124
A
SER
125
n
125
SER
125
A
LYS
126
n
126
LYS
126
A
LEU
127
n
127
LEU
127
A
GLY
128
n
128
GLY
128
A
ARG
129
n
129
ARG
129
A
ILE
130
n
130
ILE
130
A
LEU
131
n
131
LEU
131
A
GLY
132
n
132
GLY
132
A
PRO
133
n
133
PRO
133
A
ARG
134
n
134
ARG
134
A
GLY
135
n
135
GLY
135
A
LEU
136
n
136
LEU
136
A
LEU
137
n
137
LEU
137
A
PRO
138
n
138
PRO
138
A
ASN
139
n
139
ASN
139
A
PRO
140
n
140
PRO
140
A
LYS
141
n
141
LYS
141
A
ALA
142
n
142
ALA
142
A
GLY
143
n
143
GLY
143
A
THR
144
n
144
THR
144
A
VAL
145
n
145
VAL
145
A
GLY
146
n
146
GLY
146
A
PHE
147
n
147
PHE
147
A
ASN
148
n
148
ASN
148
A
ILE
149
n
149
ILE
149
A
GLY
150
n
150
GLY
150
A
GLU
151
n
151
GLU
151
A
ILE
152
n
152
ILE
152
A
ILE
153
n
153
ILE
153
A
ARG
154
n
154
ARG
154
A
GLU
155
n
155
GLU
155
A
ILE
156
n
156
ILE
156
A
LYS
157
n
157
LYS
157
A
ALA
158
n
158
ALA
158
A
GLY
159
n
159
GLY
159
A
ARG
160
n
160
ARG
160
A
ILE
161
n
161
ILE
161
A
GLU
162
n
162
GLU
162
A
PHE
163
n
163
PHE
163
A
ARG
164
n
164
ARG
164
A
ASN
165
n
165
ASN
165
A
ASP
166
n
166
ASP
166
A
LYS
167
n
167
LYS
167
A
THR
168
n
168
THR
168
A
GLY
169
n
169
GLY
169
A
ALA
170
n
170
ALA
170
A
ILE
171
n
171
ILE
171
A
HIS
172
n
172
HIS
172
A
ALA
173
n
173
ALA
173
A
PRO
174
n
174
PRO
174
A
VAL
175
n
175
VAL
175
A
GLY
176
n
176
GLY
176
A
LYS
177
n
177
LYS
177
A
ALA
178
n
178
ALA
178
A
CYS
179
n
179
CYS
179
A
PHE
180
n
180
PHE
180
A
PRO
181
n
181
PRO
181
A
PRO
182
n
182
PRO
182
A
GLU
183
n
183
GLU
183
A
LYS
184
n
184
LYS
184
A
LEU
185
n
185
LEU
185
A
ALA
186
n
186
ALA
186
A
ASP
187
n
187
ASP
187
A
ASN
188
n
188
ASN
188
A
ILE
189
n
189
ILE
189
A
ARG
190
n
190
ARG
190
A
ALA
191
n
191
ALA
191
A
PHE
192
n
192
PHE
192
A
ILE
193
n
193
ILE
193
A
ARG
194
n
194
ARG
194
A
ALA
195
n
195
ALA
195
A
LEU
196
n
196
LEU
196
A
GLU
197
n
197
GLU
197
A
ALA
198
n
198
ALA
198
A
HIS
199
n
199
HIS
199
A
LYS
200
n
200
LYS
200
A
PRO
201
n
201
PRO
201
A
GLU
202
n
202
GLU
202
A
GLY
203
n
203
GLY
203
A
ALA
204
n
204
ALA
204
A
LYS
205
n
205
LYS
205
A
GLY
206
n
206
GLY
206
A
THR
207
n
207
THR
207
A
PHE
208
n
208
PHE
208
A
LEU
209
n
209
LEU
209
A
ARG
210
n
210
ARG
210
A
SER
211
n
211
SER
211
A
VAL
212
n
212
VAL
212
A
TYR
213
n
213
TYR
213
A
VAL
214
n
214
VAL
214
A
THR
215
n
215
THR
215
A
THR
216
n
216
THR
216
A
THR
217
n
217
THR
217
A
MET
218
n
218
MET
218
A
GLY
219
n
219
GLY
219
A
PRO
220
n
220
PRO
220
A
SER
221
n
221
SER
221
A
VAL
222
n
222
VAL
222
A
ARG
223
n
223
ARG
223
A
ILE
224
n
224
ILE
224
A
ASN
225
n
225
ASN
225
A
PRO
226
n
226
PRO
226
A
HIS
227
n
227
HIS
227
A
SER
228
n
228
SER
228
A
author_defined_assembly
1
monomeric
A
GLU
42
A
OE2
GLU
42
1_555
A
HG
900
E
HG
HG
1_555
A
HIS
172
A
NE2
HIS
172
1_555
87.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
60
A
O
GLY
60
A
N
PHE
163
A
N
PHE
163
A
O
ALA
112
A
O
ALA
112
A
N
LEU
75
A
N
LEU
75
A
O
ALA
76
A
O
ALA
76
A
N
TYR
93
A
N
TYR
93
A
O
VAL
222
A
O
VAL
222
A
N
VAL
214
A
N
VAL
214
A
O
ARG
210
A
O
ARG
210
A
N
LYS
46
A
N
LYS
46
A
O
VAL
41
A
O
VAL
41
A
N
GLY
176
A
N
GLY
176
1
A
PRO
1
A
PRO
1
1
Y
1
A
LYS
2
A
LYS
2
1
Y
1
A
HIS
3
A
HIS
3
1
Y
1
A
GLY
4
A
GLY
4
1
Y
1
A
ARG
6
-167.78
47.63
1
A
TYR
7
-167.03
20.52
1
A
ALA
33
-89.60
35.39
1
A
PHE
37
46.37
-168.86
1
A
MET
108
-152.99
23.27
1
A
ASP
109
-81.30
45.83
1
A
ASN
148
-91.70
59.16
PARHCSDX.PRO
TOPHCSDX.PRO
PARAM11.WAT
TOPH11.WAT
PAR.MPD
TOP.MPD
PAR.SULPH
TOP.SULPH
PARAMNEW.ION
TOPNEW.ION
0.27
0.0065
0.203
0.203
1.9
10.
1710
17136
10.
98.8
RANDOM
100000.
0.1
1
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
NAT L1
1.9
10.
121
1857
24
0
1712
0.013
1.85
25.14
1.67
1.8
12.0
1AD2
24181
0.059
1
98.8
0.32
1.8
8.5
98.4
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
XDS
data scaling
XSCALE
phasing
X-PLOR
3.1
RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
ILE
22
A
ILE
22
HELX_P
A
GLU
31
A
GLU
31
1
1
10
A
SER
54
A
SER
54
HELX_P
A
GLN
56
A
GLN
56
5
2
3
A
GLY
80
A
GLY
80
HELX_P
A
GLU
88
A
GLU
88
5
3
9
A
GLU
97
A
GLU
97
HELX_P
A
LEU
104
A
LEU
104
5
4
8
A
PRO
117
A
PRO
117
HELX_P
A
ARG
134
A
ARG
134
5
5
18
A
ILE
149
A
ILE
149
HELX_P
A
LYS
157
A
LYS
157
1
6
9
A
PRO
182
A
PRO
182
HELX_P
A
HIS
199
A
HIS
199
1
7
18
metalc
3.532
A
GLU
42
A
OE2
GLU
42
1_555
A
HG
900
E
HG
HG
1_555
metalc
2.879
A
HIS
172
A
NE2
HIS
172
1_555
A
HG
900
E
HG
HG
1_555
RIBOSOMAL PROTEIN
RIBOSOMAL PROTEIN, RNA BINDING, PROTEIN SYNTHESIS, MUTANT
RL1_THETH
UNP
1
1
P27150
PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKG
EKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGR
IEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS
1
228
1AD2
1
228
P27150
A
1
1
228
1
SER
engineered mutation
CYS
179
1AD2
A
P27150
UNP
179
179
2
3
4
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
59
A
ARG
59
A
SER
63
A
SER
63
A
ARG
160
A
ARG
160
A
ARG
164
A
ARG
164
A
ALA
112
A
ALA
112
A
ALA
115
A
ALA
115
A
VAL
74
A
VAL
74
A
ILE
77
A
ILE
77
A
TYR
93
A
TYR
93
A
GLY
95
A
GLY
95
A
VAL
222
A
VAL
222
A
ILE
224
A
ILE
224
A
LEU
209
A
LEU
209
A
THR
215
A
THR
215
A
THR
40
A
THR
40
A
LEU
47
A
LEU
47
A
ALA
170
A
ALA
170
A
LYS
177
A
LYS
177
BINDING SITE FOR RESIDUE SO4 A 800
A
SO4
800
Software
3
BINDING SITE FOR RESIDUE SO4 A 801
A
SO4
801
Software
4
BINDING SITE FOR RESIDUE SO4 A 803
A
SO4
803
Software
5
BINDING SITE FOR RESIDUE HG A 900
A
HG
900
Software
2
BINDING SITE FOR RESIDUE MRD A 700
A
MRD
700
Software
3
A
LYS
18
A
LYS
18
3
3_547
A
THR
61
A
THR
61
3
1_555
A
HIS
199
A
HIS
199
3
1_555
A
HIS
66
A
HIS
66
4
1_555
A
GLY
67
A
GLY
67
4
1_555
A
GLN
71
A
GLN
71
4
1_555
A
LYS
184
A
LYS
184
4
1_555
A
GLU
88
A
GLU
88
5
3_556
A
LYS
141
A
LYS
141
5
1_555
A
ASP
166
A
ASP
166
5
1_555
A
LYS
167
A
LYS
167
5
1_555
A
HOH
683
G
HOH
5
1_555
A
GLU
42
A
GLU
42
2
1_555
A
HIS
172
A
HIS
172
2
1_555
A
GLY
67
A
GLY
67
3
1_555
A
GLY
176
A
GLY
176
3
1_555
A
LYS
177
A
LYS
177
3
1_555
18
P 21 21 2