0.008313 0.004799 0.000000 0.000000 0.009599 0.000000 0.000000 0.000000 0.012755 0.00000 0.00000 0.00000 Xiang, S. Carter, C.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 120.300 120.300 78.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Biochemistry BICHAW 0033 0006-2960 36 4768 4774 10.1021/bi963091e 9125497 The structure of the cytidine deaminase-product complex provides evidence for efficient proton transfer and ground-state destabilization. 1997 10.2210/pdb1af2/pdb pdb_00001af2 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 297 1 MIRRORS IMAGE PLATE 1993-02 RIGAKU RAXIS IIC NI FILTER M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 31569.785 CYTIDINE DEAMINASE 3.5.4.5 1 man polymer 65.409 ZINC ION 1 syn non-polymer 324.181 URIDINE-5'-MONOPHOSPHATE 1 syn non-polymer 18.015 water 49 nat water no no MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLAAACARTPLSNFNVGAIARGV SGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL QGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLAAACARTPLSNFNVGAIARGV SGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL QGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli 1 5.187 76.289 6.2 pH 6.2 database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Derived calculations Version format compliance Other Database references Derived calculations Other Refinement description 1 0 1997-07-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2016-09-28 1 4 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-03-20 REL REL ZN ZINC ION U URIDINE-5'-MONOPHOSPHATE HOH water 1CTU PDB ENTRY 1CTU PDB experimental model ZN 296 2 ZN ZN 296 A U 295 3 U U 295 A HOH 503 4 HOH HOH 503 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 509 4 HOH HOH 509 A HOH 511 4 HOH HOH 511 A HOH 515 4 HOH HOH 515 A HOH 516 4 HOH HOH 516 A HOH 517 4 HOH HOH 517 A HOH 518 4 HOH HOH 518 A HOH 522 4 HOH HOH 522 A HOH 525 4 HOH HOH 525 A HOH 526 4 HOH HOH 526 A HOH 527 4 HOH HOH 527 A HOH 528 4 HOH HOH 528 A HOH 531 4 HOH HOH 531 A HOH 533 4 HOH HOH 533 A HOH 536 4 HOH HOH 536 A HOH 538 4 HOH HOH 538 A HOH 539 4 HOH HOH 539 A HOH 540 4 HOH HOH 540 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 550 4 HOH HOH 550 A HOH 555 4 HOH HOH 555 A HOH 557 4 HOH HOH 557 A HOH 558 4 HOH HOH 558 A HOH 560 4 HOH HOH 560 A HOH 561 4 HOH HOH 561 A HOH 562 4 HOH HOH 562 A HOH 563 4 HOH HOH 563 A HOH 564 4 HOH HOH 564 A HOH 565 4 HOH HOH 565 A HOH 566 4 HOH HOH 566 A HOH 568 4 HOH HOH 568 A HOH 569 4 HOH HOH 569 A HOH 573 4 HOH HOH 573 A HOH 575 4 HOH HOH 575 A HOH 601 4 HOH HOH 601 A HOH 602 4 HOH HOH 602 A HOH 603 4 HOH HOH 603 A HOH 604 4 HOH HOH 604 A HOH 605 4 HOH HOH 605 A HOH 607 4 HOH HOH 607 A HOH 610 4 HOH HOH 610 A HOH 611 4 HOH HOH 611 A HOH 613 4 HOH HOH 613 A HOH 615 4 HOH HOH 615 A HOH 616 4 HOH HOH 616 A HOH 617 4 HOH HOH 617 A MET 1 n 1 MET 1 A HIS 2 n 2 HIS 2 A PRO 3 n 3 PRO 3 A ARG 4 n 4 ARG 4 A PHE 5 n 5 PHE 5 A GLN 6 n 6 GLN 6 A THR 7 n 7 THR 7 A ALA 8 n 8 ALA 8 A PHE 9 n 9 PHE 9 A ALA 10 n 10 ALA 10 A GLN 11 n 11 GLN 11 A LEU 12 n 12 LEU 12 A ALA 13 n 13 ALA 13 A ASP 14 n 14 ASP 14 A ASN 15 n 15 ASN 15 A LEU 16 n 16 LEU 16 A GLN 17 n 17 GLN 17 A SER 18 n 18 SER 18 A ALA 19 n 19 ALA 19 A LEU 20 n 20 LEU 20 A GLU 21 n 21 GLU 21 A PRO 22 n 22 PRO 22 A ILE 23 n 23 ILE 23 A LEU 24 n 24 LEU 24 A ALA 25 n 25 ALA 25 A ASP 26 n 26 ASP 26 A LYS 27 n 27 LYS 27 A TYR 28 n 28 TYR 28 A PHE 29 n 29 PHE 29 A PRO 30 n 30 PRO 30 A ALA 31 n 31 ALA 31 A LEU 32 n 32 LEU 32 A LEU 33 n 33 LEU 33 A THR 34 n 34 THR 34 A GLY 35 n 35 GLY 35 A GLU 36 n 36 GLU 36 A GLN 37 n 37 GLN 37 A VAL 38 n 38 VAL 38 A SER 39 n 39 SER 39 A SER 40 n 40 SER 40 A LEU 41 n 41 LEU 41 A LYS 42 n 42 LYS 42 A SER 43 n 43 SER 43 A ALA 44 n 44 ALA 44 A THR 45 n 45 THR 45 A GLY 46 n 46 GLY 46 A LEU 47 n 47 LEU 47 A ASP 48 n 48 ASP 48 A GLU 49 n 49 GLU 49 A ASP 50 n 50 ASP 50 A ALA 51 n 51 ALA 51 A LEU 52 n 52 LEU 52 A ALA 53 n 53 ALA 53 A PHE 54 n 54 PHE 54 A ALA 55 n 55 ALA 55 A LEU 56 n 56 LEU 56 A LEU 57 n 57 LEU 57 A PRO 58 n 58 PRO 58 A LEU 59 n 59 LEU 59 A ALA 60 n 60 ALA 60 A ALA 61 n 61 ALA 61 A ALA 62 n 62 ALA 62 A CYS 63 n 63 CYS 63 A ALA 64 n 64 ALA 64 A ARG 65 n 65 ARG 65 A THR 66 n 66 THR 66 A PRO 67 n 67 PRO 67 A LEU 68 n 68 LEU 68 A SER 69 n 69 SER 69 A ASN 70 n 70 ASN 70 A PHE 71 n 71 PHE 71 A ASN 72 n 72 ASN 72 A VAL 73 n 73 VAL 73 A GLY 74 n 74 GLY 74 A ALA 75 n 75 ALA 75 A ILE 76 n 76 ILE 76 A ALA 77 n 77 ALA 77 A ARG 78 n 78 ARG 78 A GLY 79 n 79 GLY 79 A VAL 80 n 80 VAL 80 A SER 81 n 81 SER 81 A GLY 82 n 82 GLY 82 A THR 83 n 83 THR 83 A TRP 84 n 84 TRP 84 A TYR 85 n 85 TYR 85 A PHE 86 n 86 PHE 86 A GLY 87 n 87 GLY 87 A ALA 88 n 88 ALA 88 A ASN 89 n 89 ASN 89 A MET 90 n 90 MET 90 A GLU 91 n 91 GLU 91 A PHE 92 n 92 PHE 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A ALA 95 n 95 ALA 95 A THR 96 n 96 THR 96 A MET 97 n 97 MET 97 A GLN 98 n 98 GLN 98 A GLN 99 n 99 GLN 99 A THR 100 n 100 THR 100 A VAL 101 n 101 VAL 101 A HIS 102 n 102 HIS 102 A ALA 103 n 103 ALA 103 A GLU 104 n 104 GLU 104 A GLN 105 n 105 GLN 105 A SER 106 n 106 SER 106 A ALA 107 n 107 ALA 107 A ILE 108 n 108 ILE 108 A SER 109 n 109 SER 109 A HIS 110 n 110 HIS 110 A ALA 111 n 111 ALA 111 A TRP 112 n 112 TRP 112 A LEU 113 n 113 LEU 113 A SER 114 n 114 SER 114 A GLY 115 n 115 GLY 115 A GLU 116 n 116 GLU 116 A LYS 117 n 117 LYS 117 A ALA 118 n 118 ALA 118 A LEU 119 n 119 LEU 119 A ALA 120 n 120 ALA 120 A ALA 121 n 121 ALA 121 A ILE 122 n 122 ILE 122 A THR 123 n 123 THR 123 A VAL 124 n 124 VAL 124 A ASN 125 n 125 ASN 125 A TYR 126 n 126 TYR 126 A THR 127 n 127 THR 127 A PRO 128 n 128 PRO 128 A CYS 129 n 129 CYS 129 A GLY 130 n 130 GLY 130 A HIS 131 n 131 HIS 131 A CYS 132 n 132 CYS 132 A ARG 133 n 133 ARG 133 A GLN 134 n 134 GLN 134 A PHE 135 n 135 PHE 135 A MET 136 n 136 MET 136 A ASN 137 n 137 ASN 137 A GLU 138 n 138 GLU 138 A LEU 139 n 139 LEU 139 A ASN 140 n 140 ASN 140 A SER 141 n 141 SER 141 A GLY 142 n 142 GLY 142 A LEU 143 n 143 LEU 143 A ASP 144 n 144 ASP 144 A LEU 145 n 145 LEU 145 A ARG 146 n 146 ARG 146 A ILE 147 n 147 ILE 147 A HIS 148 n 148 HIS 148 A LEU 149 n 149 LEU 149 A PRO 150 n 150 PRO 150 A GLY 151 n 151 GLY 151 A ARG 152 n 152 ARG 152 A GLU 153 n 153 GLU 153 A ALA 154 n 154 ALA 154 A HIS 155 n 155 HIS 155 A ALA 156 n 156 ALA 156 A LEU 157 n 157 LEU 157 A ARG 158 n 158 ARG 158 A ASP 159 n 159 ASP 159 A TYR 160 n 160 TYR 160 A LEU 161 n 161 LEU 161 A PRO 162 n 162 PRO 162 A ASP 163 n 163 ASP 163 A ALA 164 n 164 ALA 164 A PHE 165 n 165 PHE 165 A GLY 166 n 166 GLY 166 A PRO 167 n 167 PRO 167 A LYS 168 n 168 LYS 168 A ASP 169 n 169 ASP 169 A LEU 170 n 170 LEU 170 A GLU 171 n 171 GLU 171 A ILE 172 n 172 ILE 172 A LYS 173 n 173 LYS 173 A THR 174 n 174 THR 174 A LEU 175 n 175 LEU 175 A LEU 176 n 176 LEU 176 A MET 177 n 177 MET 177 A ASP 178 n 178 ASP 178 A GLU 179 n 179 GLU 179 A GLN 180 n 180 GLN 180 A ASP 181 n 181 ASP 181 A HIS 182 n 182 HIS 182 A GLY 183 n 183 GLY 183 A TYR 184 n 184 TYR 184 A ALA 185 n 185 ALA 185 A LEU 186 n 186 LEU 186 A THR 187 n 187 THR 187 A GLY 188 n 188 GLY 188 A ASP 189 n 189 ASP 189 A ALA 190 n 190 ALA 190 A LEU 191 n 191 LEU 191 A SER 192 n 192 SER 192 A GLN 193 n 193 GLN 193 A ALA 194 n 194 ALA 194 A ALA 195 n 195 ALA 195 A ILE 196 n 196 ILE 196 A ALA 197 n 197 ALA 197 A ALA 198 n 198 ALA 198 A ALA 199 n 199 ALA 199 A ASN 200 n 200 ASN 200 A ARG 201 n 201 ARG 201 A SER 202 n 202 SER 202 A HIS 203 n 203 HIS 203 A MET 204 n 204 MET 204 A PRO 205 n 205 PRO 205 A TYR 206 n 206 TYR 206 A SER 207 n 207 SER 207 A LYS 208 n 208 LYS 208 A SER 209 n 209 SER 209 A PRO 210 n 210 PRO 210 A SER 211 n 211 SER 211 A GLY 212 n 212 GLY 212 A VAL 213 n 213 VAL 213 A ALA 214 n 214 ALA 214 A LEU 215 n 215 LEU 215 A GLU 216 n 216 GLU 216 A CYS 217 n 217 CYS 217 A LYS 218 n 218 LYS 218 A ASP 219 n 219 ASP 219 A GLY 220 n 220 GLY 220 A ARG 221 n 221 ARG 221 A ILE 222 n 222 ILE 222 A PHE 223 n 223 PHE 223 A SER 224 n 224 SER 224 A GLY 225 n 225 GLY 225 A SER 226 n 226 SER 226 A TYR 227 n 227 TYR 227 A ALA 228 n 228 ALA 228 A GLU 229 n 229 GLU 229 A ASN 230 n 230 ASN 230 A ALA 231 n 231 ALA 231 A ALA 232 n 232 ALA 232 A PHE 233 n 233 PHE 233 A ASN 234 n 234 ASN 234 A PRO 235 n 235 PRO 235 A THR 236 n 236 THR 236 A LEU 237 n 237 LEU 237 A PRO 238 n 238 PRO 238 A PRO 239 n 239 PRO 239 A LEU 240 n 240 LEU 240 A GLN 241 n 241 GLN 241 A GLY 242 n 242 GLY 242 A ALA 243 n 243 ALA 243 A LEU 244 n 244 LEU 244 A ILE 245 n 245 ILE 245 A LEU 246 n 246 LEU 246 A LEU 247 n 247 LEU 247 A ASN 248 n 248 ASN 248 A LEU 249 n 249 LEU 249 A LYS 250 n 250 LYS 250 A GLY 251 n 251 GLY 251 A TYR 252 n 252 TYR 252 A ASP 253 n 253 ASP 253 A TYR 254 n 254 TYR 254 A PRO 255 n 255 PRO 255 A ASP 256 n 256 ASP 256 A ILE 257 n 257 ILE 257 A GLN 258 n 258 GLN 258 A ARG 259 n 259 ARG 259 A ALA 260 n 260 ALA 260 A VAL 261 n 261 VAL 261 A LEU 262 n 262 LEU 262 A ALA 263 n 263 ALA 263 A GLU 264 n 264 GLU 264 A LYS 265 n 265 LYS 265 A ALA 266 n 266 ALA 266 A ASP 267 n 267 ASP 267 A ALA 268 n 268 ALA 268 A PRO 269 n 269 PRO 269 A LEU 270 n 270 LEU 270 A ILE 271 n 271 ILE 271 A GLN 272 n 272 GLN 272 A TRP 273 n 273 TRP 273 A ASP 274 n 274 ASP 274 A ALA 275 n 275 ALA 275 A THR 276 n 276 THR 276 A SER 277 n 277 SER 277 A ALA 278 n 278 ALA 278 A THR 279 n 279 THR 279 A LEU 280 n 280 LEU 280 A LYS 281 n 281 LYS 281 A ALA 282 n 282 ALA 282 A LEU 283 n 283 LEU 283 A GLY 284 n 284 GLY 284 A CYS 285 n 285 CYS 285 A HIS 286 n 286 HIS 286 A SER 287 n 287 SER 287 A ILE 288 n 288 ILE 288 A ASP 289 n 289 ASP 289 A ARG 290 n 290 ARG 290 A VAL 291 n 291 VAL 291 A LEU 292 n 292 LEU 292 A LEU 293 n 293 LEU 293 A ALA 294 n 294 ALA 294 A author_and_software_defined_assembly PISA 2 dimeric 4150 -31 20180 A HIS 102 A ND1 HIS 102 1_555 A ZN 296 B ZN ZN 1_555 A CYS 129 A SG CYS 129 1_555 102.2 A HIS 102 A ND1 HIS 102 1_555 A ZN 296 B ZN ZN 1_555 A CYS 132 A SG CYS 132 1_555 109.8 A CYS 129 A SG CYS 129 1_555 A ZN 296 B ZN ZN 1_555 A CYS 132 A SG CYS 132 1_555 108.8 A HIS 102 A ND1 HIS 102 1_555 A ZN 296 B ZN ZN 1_555 A U 295 C O4 U 1_555 112.5 A CYS 129 A SG CYS 129 1_555 A ZN 296 B ZN ZN 1_555 A U 295 C O4 U 1_555 100.5 A CYS 132 A SG CYS 132 1_555 A ZN 296 B ZN ZN 1_555 A U 295 C O4 U 1_555 120.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 85 A O TYR 85 A N ALA 77 A N ALA 77 A O ILE 76 A O ILE 76 A N THR 123 A N THR 123 A O ILE 122 A O ILE 122 A N ARG 146 A N ARG 146 A O PHE 223 A O PHE 223 A N LEU 215 A N LEU 215 A O GLY 212 A O GLY 212 A N ALA 263 A N ALA 263 A O ALA 260 A O ALA 260 A N ASP 289 A N ASP 289 1 A OP3 U 295 C OP3 U 1 1 N 1 A P U 295 C P U 1 1 N 1 A OP1 U 295 C OP1 U 1 1 N 1 A OP2 U 295 C OP2 U 1 1 N 1 A HOH 615 D HOH 0 N 1 A U 295 0.248 SIDE CHAIN 1 -9.68 1.60 129.70 120.02 A A A CB CG CD2 HIS HIS HIS 2 2 2 N 1 -5.10 0.50 120.30 115.20 A A A NE CZ NH2 ARG ARG ARG 65 65 65 N 1 6.39 0.80 106.30 112.69 A A A CD1 CG CD2 TRP TRP TRP 84 84 84 N 1 -5.19 0.80 107.30 102.11 A A A CE2 CD2 CG TRP TRP TRP 84 84 84 N 1 6.13 0.80 106.30 112.43 A A A CD1 CG CD2 TRP TRP TRP 112 112 112 N 1 -5.38 0.80 107.30 101.92 A A A CE2 CD2 CG TRP TRP TRP 112 112 112 N 1 7.20 0.80 106.30 113.50 A A A CD1 CG CD2 TRP TRP TRP 273 273 273 N 1 -7.97 1.30 127.00 119.03 A A A CB CG CD1 TRP TRP TRP 273 273 273 N 1 -6.57 0.80 107.30 100.73 A A A CE2 CD2 CG TRP TRP TRP 273 273 273 N 1 5.56 0.90 133.90 139.46 A A A CG CD2 CE3 TRP TRP TRP 273 273 273 N 1 15.45 2.30 115.30 130.75 A A A CA CB CG LEU LEU LEU 292 292 292 N 1 A A NE2 CD2 HIS HIS 2 2 -0.071 0.011 1.373 1.302 N 1 A A NE2 CD2 HIS HIS 102 102 -0.073 0.011 1.373 1.300 N 1 A A NE2 CD2 HIS HIS 110 110 -0.068 0.011 1.373 1.305 N 1 A A NE2 CD2 HIS HIS 131 131 -0.071 0.011 1.373 1.302 N 1 A A NE2 CD2 HIS HIS 148 148 -0.068 0.011 1.373 1.305 N 1 A A NE2 CD2 HIS HIS 155 155 -0.074 0.011 1.373 1.299 N 1 A A NE2 CD2 HIS HIS 182 182 -0.073 0.011 1.373 1.300 N 1 A A NE2 CD2 HIS HIS 203 203 -0.067 0.011 1.373 1.306 N 1 A TYR 28 -101.20 41.64 1 A ALA 95 -107.87 -148.20 1 A MET 177 84.46 0.38 1 A PHE 233 57.81 -68.81 1 A ASP 267 -90.40 35.00 PARAM19X.PRO1 TOPH19X.PRO PARAM_SX.URD1 TOPH_SX.URD PARAMCDA_SX.ZN TOPHCDA.ZN0 PARAM_SX.WAT1 TOPH_SX.WAT 2.3 7.0 24137 80. 10000000.0 0.001 1 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1CTU 2.3 7.0 49 2287 18 0 2220 2.3 20.0 1AF2 24137 1. 0.0750000 0.0800000 1 12. 2.7 80. 0.2000000 2.30 2.50 2.5 0.2200000 1 2.4 70. model building X-PLOR 3.0 refinement X-PLOR 3.0 data reduction DENZO data scaling SCALEPACK phasing X-PLOR 3.0 CRYSTAL STRUCTURE OF CYTIDINE DEAMINASE COMPLEXED WITH URIDINE 1 N N 2 N N 3 N N 4 N N A PRO 3 A PRO 3 HELX_P A GLN 11 A GLN 11 5 1 9 A ASP 14 A ASP 14 HELX_P A GLU 21 A GLU 21 1 2 8 A ILE 23 A ILE 23 HELX_P A ALA 25 A ALA 25 5 3 3 A GLY 35 A GLY 35 HELX_P A THR 45 A THR 45 1 4 11 A GLU 49 A GLU 49 HELX_P A CYS 63 A CYS 63 1 5 15 A MET 97 A MET 97 HELX_P A GLN 99 A GLN 99 5 6 3 A ALA 103 A ALA 103 HELX_P A SER 114 A SER 114 1 7 12 A GLY 130 A GLY 130 HELX_P A GLU 138 A GLU 138 1 8 9 A GLY 142 A GLY 142 HELX_P A ASP 144 A ASP 144 5 9 3 A LEU 157 A LEU 157 HELX_P A TYR 160 A TYR 160 1 10 4 A PRO 167 A PRO 167 HELX_P A LEU 170 A LEU 170 5 11 4 A ALA 190 A ALA 190 HELX_P A ARG 201 A ARG 201 1 12 12 A PRO 239 A PRO 239 HELX_P A LEU 249 A LEU 249 1 13 11 A TYR 254 A TYR 254 HELX_P A ASP 256 A ASP 256 5 14 3 A TRP 273 A TRP 273 HELX_P A LEU 283 A LEU 283 1 15 11 metalc 2.224 A HIS 102 A ND1 HIS 102 1_555 A ZN 296 B ZN ZN 1_555 metalc 2.410 A CYS 129 A SG CYS 129 1_555 A ZN 296 B ZN ZN 1_555 metalc 2.122 A CYS 132 A SG CYS 132 1_555 A ZN 296 B ZN ZN 1_555 metalc 2.062 A U 295 C O4 U 1_555 A ZN 296 B ZN ZN 1_555 COMPLEX (HYDROLASE/PRODUCT) DEAMINASE, PROTON TRANSFER, STRAIN, PRODUCT RELEASE, HYDROLASE, COMPLEX (HYDROLASE-PRODUCT), COMPLEX (HYDROLASE-PRODUCT) complex CDD_ECOLI UNP 1 1 P0ABF6 MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLAAACARTPLSNFNVGAIARGV SGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL QGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA 1 294 1AF2 1 294 P0ABF6 A 1 1 294 4 4 anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel A TRP 84 A TRP 84 A ALA 88 A ALA 88 A GLY 74 A GLY 74 A GLY 79 A GLY 79 A LEU 119 A LEU 119 A VAL 124 A VAL 124 A ARG 146 A ARG 146 A LEU 149 A LEU 149 A ILE 222 A ILE 222 A SER 226 A SER 226 A SER 211 A SER 211 A CYS 217 A CYS 217 A ILE 257 A ILE 257 A LYS 265 A LYS 265 A ILE 288 A ILE 288 A LEU 293 A LEU 293 ZN BINDING SITE. Unknown 4 BINDING SITE FOR RESIDUE ZN A 296 A ZN 296 Software 4 BINDING SITE FOR RESIDUE U A 295 A U 295 Software 15 A HIS 102 A HIS 102 4 1_555 A CYS 129 A CYS 129 4 1_555 A CYS 132 A CYS 132 4 1_555 A U 295 C U 4 1_555 A HIS 102 A HIS 102 4 1_555 A CYS 129 A CYS 129 4 1_555 A CYS 132 A CYS 132 4 1_555 A U 295 C U 4 1_555 A PHE 71 A PHE 71 15 1_555 A ASN 89 A ASN 89 15 1_555 A GLU 91 A GLU 91 15 1_555 A THR 100 A THR 100 15 1_555 A VAL 101 A VAL 101 15 1_555 A HIS 102 A HIS 102 15 1_555 A ALA 103 A ALA 103 15 1_555 A GLU 104 A GLU 104 15 1_555 A PRO 128 A PRO 128 15 1_555 A CYS 129 A CYS 129 15 1_555 A CYS 132 A CYS 132 15 1_555 A PHE 165 A PHE 165 15 4_555 A ALA 231 A ALA 231 15 4_555 A ZN 296 B ZN 15 1_555 A HOH 617 D HOH 15 1_555 152 P 31 2 1